View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14031_low_42 (Length: 274)
Name: NF14031_low_42
Description: NF14031
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14031_low_42 |
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Alignment Details
Target: chr3 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 267
Target Start/End: Original strand, 33524929 - 33525195
Alignment:
| Q |
1 |
ccaaaacaaaattaattagaagagaggttaagaagaatcatgatgaataagggaagagaaggcaaaagatcagcaccctctactgatttgttagtatgtt |
100 |
Q |
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| T |
33524929 |
ccaaaacaaaattaattagaagagaggttaagaagaatcatgatgaataagggaagagaaggcaaaagatcagcaccctctactgatttgttagtatgtt |
33525028 |
T |
|
| Q |
101 |
tcccatctcgaactcatcttcgtctaatgcctaagcccatttgcagcccagttaggccttcagagcccaacaaacaccaccaccacaaaacttaccatca |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
33525029 |
tcccatctcgaactcatcttcgtctaatgcctaagcccatttgcagcccagttaggccttcggagcccaacaaacaccaccaccacaaaacttaccatca |
33525128 |
T |
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| Q |
201 |
gcgtaagagatcaatctccagagctggtggaagtattagtggtggtggtcaagccggtagtcctatg |
267 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
33525129 |
gcgtaagagatcaatctccagagctggtggaagtatcagtggtggtggtcaagccggtagtcctatg |
33525195 |
T |
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