View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14031_low_46 (Length: 264)

Name: NF14031_low_46
Description: NF14031
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14031_low_46
NF14031_low_46
[»] chr3 (26 HSPs)
chr3 (1-236)||(33235653-33235887)
chr3 (202-264)||(40272813-40272875)
chr3 (202-264)||(54484785-54484847)
chr3 (202-263)||(13628791-13628852)
chr3 (202-264)||(10795424-10795486)
chr3 (193-249)||(47624208-47624264)
chr3 (201-264)||(22609859-22609922)
chr3 (201-236)||(31922839-31922874)
chr3 (202-236)||(516534-516568)
chr3 (202-236)||(4495677-4495711)
chr3 (202-236)||(5173720-5173754)
chr3 (202-236)||(10484617-10484651)
chr3 (202-264)||(16735534-16735596)
chr3 (202-264)||(24851302-24851364)
chr3 (202-264)||(25517171-25517233)
chr3 (202-264)||(39203608-39203670)
chr3 (202-236)||(40390363-40390397)
chr3 (202-264)||(45786215-45786277)
chr3 (202-264)||(52926220-52926282)
chr3 (202-264)||(53996566-53996628)
chr3 (202-236)||(54032572-54032606)
chr3 (202-263)||(13730603-13730664)
chr3 (202-263)||(14987054-14987115)
chr3 (199-264)||(22122915-22122980)
chr3 (202-263)||(29366721-29366782)
chr3 (203-263)||(353351-353411)
[»] chr2 (18 HSPs)
chr2 (202-264)||(14444800-14444862)
chr2 (202-264)||(9671251-9671313)
chr2 (202-264)||(10543772-10543834)
chr2 (202-264)||(10546235-10546297)
chr2 (202-263)||(14530393-14530454)
chr2 (199-262)||(40579747-40579810)
chr2 (202-264)||(8455317-8455379)
chr2 (202-264)||(36871564-36871625)
chr2 (202-249)||(8575982-8576029)
chr2 (202-249)||(22371199-22371246)
chr2 (193-264)||(25249730-25249801)
chr2 (202-236)||(14544166-14544200)
chr2 (202-264)||(21779262-21779324)
chr2 (206-264)||(23488555-23488613)
chr2 (202-236)||(25632609-25632643)
chr2 (202-264)||(40762235-40762297)
chr2 (202-263)||(25079718-25079779)
chr2 (205-249)||(124918-124962)
[»] scaffold0057 (2 HSPs)
scaffold0057 (202-264)||(46903-46965)
scaffold0057 (193-264)||(24764-24835)
[»] chr5 (13 HSPs)
chr5 (202-264)||(16957386-16957448)
chr5 (202-263)||(38879656-38879717)
chr5 (192-264)||(24448962-24449034)
chr5 (202-263)||(25622533-25622594)
chr5 (195-236)||(29184055-29184096)
chr5 (202-264)||(7097761-7097823)
chr5 (200-234)||(19438768-19438802)
chr5 (202-264)||(28516434-28516496)
chr5 (202-264)||(32703494-32703556)
chr5 (202-264)||(43334277-43334338)
chr5 (202-235)||(32354228-32354261)
chr5 (205-261)||(39801591-39801647)
chr5 (202-234)||(41014420-41014452)
[»] chr4 (29 HSPs)
chr4 (202-264)||(20639659-20639721)
chr4 (202-264)||(44363131-44363193)
chr4 (202-263)||(38755909-38755970)
chr4 (200-264)||(6430625-6430689)
chr4 (202-261)||(30690177-30690236)
chr4 (202-264)||(11394924-11394986)
chr4 (202-264)||(11404651-11404713)
chr4 (202-264)||(14983906-14983968)
chr4 (202-264)||(20908637-20908699)
chr4 (202-264)||(25629121-25629183)
chr4 (202-263)||(23501862-23501923)
chr4 (202-263)||(33836488-33836549)
chr4 (202-262)||(32484307-32484367)
chr4 (193-249)||(35532079-35532135)
chr4 (202-262)||(40553938-40553998)
chr4 (210-249)||(37038132-37038171)
chr4 (202-264)||(5648330-5648392)
chr4 (202-264)||(20225054-20225116)
chr4 (202-264)||(30352581-30352643)
chr4 (202-264)||(35567242-35567304)
chr4 (202-264)||(38786681-38786743)
chr4 (201-234)||(8473620-8473653)
chr4 (202-263)||(20225149-20225210)
chr4 (202-263)||(25388249-25388310)
chr4 (203-264)||(29207900-29207961)
chr4 (199-264)||(40915900-40915965)
chr4 (201-264)||(7909280-7909344)
chr4 (202-234)||(16408602-16408634)
chr4 (202-234)||(56323002-56323034)
[»] chr1 (16 HSPs)
chr1 (202-264)||(4349733-4349795)
chr1 (202-264)||(19414532-19414594)
chr1 (202-264)||(35005220-35005282)
chr1 (202-264)||(46247954-46248016)
chr1 (202-264)||(50606498-50606560)
chr1 (202-263)||(10668323-10668384)
chr1 (202-263)||(27474376-27474437)
chr1 (204-264)||(45402191-45402251)
chr1 (204-263)||(46991900-46991959)
chr1 (202-263)||(18944741-18944803)
chr1 (210-264)||(19701666-19701720)
chr1 (202-264)||(34725099-34725161)
chr1 (202-264)||(42304208-42304270)
chr1 (199-264)||(4587561-4587626)
chr1 (203-236)||(22325016-22325049)
chr1 (202-234)||(20004091-20004123)
[»] chr6 (11 HSPs)
chr6 (202-263)||(29355856-29355917)
chr6 (193-263)||(6808468-6808538)
chr6 (202-263)||(9161197-9161258)
chr6 (202-264)||(1347034-1347096)
chr6 (202-264)||(1354758-1354820)
chr6 (202-263)||(12221915-12221977)
chr6 (202-264)||(12885985-12886047)
chr6 (202-264)||(13267797-13267859)
chr6 (202-264)||(24097649-24097711)
chr6 (202-263)||(12892082-12892143)
chr6 (208-264)||(3815084-3815140)
[»] chr7 (17 HSPs)
chr7 (193-264)||(7879710-7879781)
chr7 (202-249)||(45018924-45018971)
chr7 (202-264)||(38262197-38262259)
chr7 (202-264)||(2541020-2541082)
chr7 (202-264)||(21172010-21172072)
chr7 (202-264)||(27889317-27889379)
chr7 (202-264)||(32758331-32758393)
chr7 (202-236)||(36602547-36602581)
chr7 (202-264)||(42391101-42391163)
chr7 (202-264)||(48735123-48735185)
chr7 (199-264)||(11617586-11617651)
chr7 (202-235)||(29907519-29907552)
chr7 (202-263)||(42805599-42805660)
chr7 (193-233)||(11741896-11741936)
chr7 (203-263)||(18512455-18512515)
chr7 (203-263)||(35334818-35334878)
chr7 (202-234)||(42476973-42477005)
[»] scaffold0018 (1 HSPs)
scaffold0018 (202-236)||(72868-72902)
[»] chr8 (22 HSPs)
chr8 (202-264)||(12625962-12626024)
chr8 (202-264)||(28407475-28407537)
chr8 (202-264)||(35261751-35261813)
chr8 (202-264)||(36720868-36720930)
chr8 (200-261)||(27507985-27508046)
chr8 (202-263)||(28817627-28817688)
chr8 (203-264)||(29877166-29877227)
chr8 (202-263)||(39460995-39461056)
chr8 (200-264)||(45071336-45071400)
chr8 (202-249)||(27468093-27468140)
chr8 (202-264)||(8897765-8897827)
chr8 (202-236)||(10857929-10857963)
chr8 (202-264)||(13160773-13160835)
chr8 (202-264)||(26102589-26102651)
chr8 (202-264)||(30454098-30454160)
chr8 (202-264)||(35107312-35107374)
chr8 (202-264)||(44530221-44530283)
chr8 (193-234)||(20870027-20870068)
chr8 (202-234)||(6760926-6760958)
chr8 (205-249)||(18164764-18164808)
chr8 (207-263)||(20284075-20284131)
chr8 (207-263)||(21070703-21070759)
[»] scaffold1176 (1 HSPs)
scaffold1176 (205-236)||(1591-1622)
[»] scaffold0311 (1 HSPs)
scaffold0311 (214-264)||(10882-10932)
[»] scaffold0223 (1 HSPs)
scaffold0223 (202-264)||(11201-11263)
[»] scaffold0168 (1 HSPs)
scaffold0168 (202-264)||(30649-30711)
[»] scaffold0049 (1 HSPs)
scaffold0049 (202-264)||(59051-59113)
[»] scaffold0015 (1 HSPs)
scaffold0015 (202-264)||(48635-48697)
[»] scaffold0258 (1 HSPs)
scaffold0258 (202-263)||(13025-13086)


Alignment Details
Target: chr3 (Bit Score: 216; Significance: 1e-119; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 33235887 - 33235653
Alignment:
Q  1 aatataaggatgagccaccatagtgtatggaacataaggccaaagctcaaccttcttctttgtagattgagcagctttcaacactttctttggttcaaca 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33235887 aatataaggatgagccaccatagtgtatggaacataaggccaaagctcaaccttcttctttgtagattgagcagctttcaacactttctttggttcaaca 33235788  T
Q  101 tatccactcactgttactttctgctgcttcaagtccacgtccactttcttagctcctgttcaaatttcaaattaatttccaataaatgaactaaaaacaa 200  Q
    ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  33235787 tatccactcaccgttactttctgctgcttcaagtccacatccactttcttagctcctgttcaaatttc-aattaatttccaataaatgaactaaaaacaa 33235689  T
Q  201 taagggcaacctggtgcactaaagctcccgcatacg 236  Q
    |||||||||||||||||||||||||| |||||||||    
T  33235688 taagggcaacctggtgcactaaagcttccgcatacg 33235653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 40272813 - 40272875
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| |||||||||||||||||||||||| || || ||||||  |||||||||||||    
T  40272813 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 40272875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 54484847 - 54484785
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| |||||||||||||||||||||||| || || ||||||  |||||||||||||    
T  54484847 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 54484785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 13628791 - 13628852
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    |||||||||| |||||||||||||||||||||||| || || ||||||  ||||||||||||    
T  13628791 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 13628852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 10795424 - 10795486
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    ||||||||||||||||||| ||||||||||||||| || || | ||||  |||||||||||||    
T  10795424 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 10795486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 249
Target Start/End: Complemental strand, 47624264 - 47624208
Alignment:
Q  193 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaa 249  Q
    ||||| || |||||||||| |||||||||||||||||||||||| || || ||||||    
T  47624264 aaaaaaaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 47624208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 264
Target Start/End: Complemental strand, 22609922 - 22609859
Alignment:
Q  201 taagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    ||||||||||| |||||||| ||||||||||||||| |  || ||||||  |||||||||||||    
T  22609922 taagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccattt 22609859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 201 - 236
Target Start/End: Original strand, 31922839 - 31922874
Alignment:
Q  201 taagggcaacctggtgcactaaagctcccgcatacg 236  Q
    |||||||| |||||||||||||||||||||||||||    
T  31922839 taagggcagcctggtgcactaaagctcccgcatacg 31922874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Complemental strand, 516568 - 516534
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacg 236  Q
    |||||||||| ||||||||||||||||||||||||    
T  516568 aagggcaacccggtgcactaaagctcccgcatacg 516534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Original strand, 4495677 - 4495711
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacg 236  Q
    |||||||||| ||||||||||||||||||||||||    
T  4495677 aagggcaacccggtgcactaaagctcccgcatacg 4495711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Original strand, 5173720 - 5173754
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacg 236  Q
    |||||||||| ||||||||||||||||||||||||    
T  5173720 aagggcaacccggtgcactaaagctcccgcatacg 5173754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Original strand, 10484617 - 10484651
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacg 236  Q
    |||||||||| ||||||||||||||||||||||||    
T  10484617 aagggcaacccggtgcactaaagctcccgcatacg 10484651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 16735596 - 16735534
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    ||||||||||  ||||||| ||||| ||||||||| ||||| ||||||  |||||||||||||    
T  16735596 aagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccattt 16735534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 24851302 - 24851364
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| |||||||||||||||||||||| | ||  | ||||||  |||||||||||||    
T  24851302 aagggcaacccggtgcactaaagctcccgcatatgcaggatccgggaaggggtcccaccattt 24851364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 25517171 - 25517233
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| |||||||||||||||| ||||||| ||  | ||||||  |||||||||||||    
T  25517171 aagggcaacccggtgcactaaagctccagcatacgcaggatccgggaaggggtcccaccattt 25517233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 39203670 - 39203608
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| |||||||||||||||||||||| | |  || ||||||  |||||||||||||    
T  39203670 aagggcaacccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccaccattt 39203608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Complemental strand, 40390397 - 40390363
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacg 236  Q
    |||||||||| ||||||||||||||||||||||||    
T  40390397 aagggcaacccggtgcactaaagctcccgcatacg 40390363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 45786215 - 45786277
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| |||||||||||||||| |||| || || || ||||||  |||||||||||||    
T  45786215 aagggcaacccggtgcactaaagctccagcattcgcagggtccgggaaggggtcccaccattt 45786277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 52926220 - 52926282
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| ||||| |||||||||||||||||| || || ||||||   ||||||||||||    
T  52926220 aagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaaggtgtcccaccattt 52926282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 53996566 - 53996628
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    ||||||| || ||||||||||||||||| |||||| |||||  |||||  |||||||||||||    
T  53996566 aagggcagcccggtgcactaaagctcccacatacgcagtgtcagggaaggggtcccaccattt 53996628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Original strand, 54032572 - 54032606
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacg 236  Q
    |||||||||| ||||||||||||||||||||||||    
T  54032572 aagggcaacccggtgcactaaagctcccgcatacg 54032606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 13730603 - 13730664
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    |||||||||| |||||||||||||||||||||| |  | || ||||||  ||||||||||||    
T  13730603 aagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 13730664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 14987115 - 14987054
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    ||||| |||| |||||||||||||||||||||| | |  || ||||||| ||||||||||||    
T  14987115 aagggaaacccggtgcactaaagctcccgcatatgcaaggtccgggaatgggtcccaccatt 14987054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 22122915 - 22122980
Alignment:
Q  199 aataagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    ||||||||||||| ||||||||| ||||| |||||| | || || ||||||  |||||||||||||    
T  22122915 aataagggcaacccggtgcactagagctctcgcatatgcagggtccgggaaggggtcccaccattt 22122980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 29366721 - 29366782
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    ||||||||||  |||||||||||||||| |||||| || || ||||||  ||||||||||||    
T  29366721 aagggcaacccagtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccatt 29366782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 263
Target Start/End: Original strand, 353351 - 353411
Alignment:
Q  203 agggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    ||||||||| |||||||||||||||||||||| |  | || ||||||  ||||||||||||    
T  353351 agggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 353411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 14444862 - 14444800
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    ||||||||||||||||||||||||||||||||||| || || ||||||  |||||||||||||    
T  14444862 aagggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 14444800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 9671313 - 9671251
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| |||||||||||||||||||||||| || || ||||||  |||||||||||||    
T  9671313 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 9671251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 10543834 - 10543772
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| |||||||||||||||||||||||| || || ||||||  |||||||||||||    
T  10543834 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 10543772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 10546297 - 10546235
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| |||||||||||||||||||||||| || || ||||||  |||||||||||||    
T  10546297 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 10546235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 14530454 - 14530393
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    |||||||||| |||||||||||||||||||||||| || || ||||||  ||||||||||||    
T  14530454 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 14530393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 199 - 262
Target Start/End: Original strand, 40579747 - 40579810
Alignment:
Q  199 aataagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccat 262  Q
    ||||||||||||| |||||||||||||||||||||||  || || ||||||  |||||||||||    
T  40579747 aataagggcaacccggtgcactaaagctcccgcatactcagggtccgggaaggggtcccaccat 40579810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 8455317 - 8455379
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| |||||||||||||||| ||||||| || || ||||||  |||||||||||||    
T  8455317 aagggcaacccggtgcactaaagctccggcatacgcagggtccgggaaggggtcccaccattt 8455379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 36871625 - 36871564
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| |||||||||||||||||||||||| || || ||||||  |||||||||||||    
T  36871625 aagggcaacccggtgcactaaagctcccgcatacgcag-gtccgggaaggggtcccaccattt 36871564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 249
Target Start/End: Complemental strand, 8576029 - 8575982
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaa 249  Q
    |||||||||||||||||||||||||||| |||||| || || ||||||    
T  8576029 aagggcaacctggtgcactaaagctcccacatacgcagggtccgggaa 8575982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 249
Target Start/End: Complemental strand, 22371246 - 22371199
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaa 249  Q
    |||||||||| |||||||||||||||||||||||| || || ||||||    
T  22371246 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 22371199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 25249730 - 25249801
Alignment:
Q  193 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    ||||| || |||||||||| ||||||||||||||| |||||||| || || ||||||  | |||||||||||    
T  25249730 aaaaaaaaaaagggcaacccggtgcactaaagctcacgcatacgcagggttcgggaagggatcccaccattt 25249801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Complemental strand, 14544200 - 14544166
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacg 236  Q
    ||||||||| |||||||||||||||||||||||||    
T  14544200 aagggcaacttggtgcactaaagctcccgcatacg 14544166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 21779262 - 21779324
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| ||||||||| |||||||||||| | || || ||||||  |||||||||||||    
T  21779262 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 21779324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 206 - 264
Target Start/End: Complemental strand, 23488613 - 23488555
Alignment:
Q  206 gcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||| ||||||||||||||| |||||||| || || ||||||  |||||||||||||    
T  23488613 gcaacccggtgcactaaagctctcgcatacgcagggtccgggaaggggtcccaccattt 23488555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Complemental strand, 25632643 - 25632609
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacg 236  Q
    |||||||||| ||||||||||||||||||||||||    
T  25632643 aagggcaacccggtgcactaaagctcccgcatacg 25632609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 40762235 - 40762297
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| ||||||||||||||||| |||||| || || | ||||  |||||||||||||    
T  40762235 aagggcaacccggtgcactaaagctcccacatacgcagggtccaggaaagggtcccaccattt 40762297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 25079718 - 25079779
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    |||||||||| |||||||||||||||  ||||||| || || ||||||  ||||||||||||    
T  25079718 aagggcaacccggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccaccatt 25079779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 124918 - 124962
Alignment:
Q  205 ggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaa 249  Q
    ||||||| |||||||||||||||||||||||| || || ||||||    
T  124918 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 124962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 46965 - 46903
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| |||||||||||||||||||||||| || || ||||||  |||||||||||||    
T  46965 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 46903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 24764 - 24835
Alignment:
Q  193 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    ||||| || |||||||||| | |||||||||||||||||||||| || || ||||||  |||||||||||||    
T  24764 aaaaaaaaaaagggcaaccggctgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattt 24835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 16957448 - 16957386
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| |||||||||||||||||||||||| || || ||||||  |||||||||||||    
T  16957448 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 16957386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 38879717 - 38879656
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    |||||||||| |||||||||||||||||||||||| || || ||||||  ||||||||||||    
T  38879717 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 38879656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 264
Target Start/End: Complemental strand, 24449034 - 24448962
Alignment:
Q  192 taaaaacaataagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||| || |||||||||| |||||||||||||||| ||||||| || || ||||||  |||||||||||||    
T  24449034 taaaaaaaaaaagggcaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccattt 24448962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 25622594 - 25622533
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    |||||||| | |||||||||||||||||||||||| || || ||||||  ||||||||||||    
T  25622594 aagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 25622533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 29184055 - 29184096
Alignment:
Q  195 aaacaataagggcaacctggtgcactaaagctcccgcatacg 236  Q
    |||| |||||||||||| ||||||||||||||||||||||||    
T  29184055 aaactataagggcaacccggtgcactaaagctcccgcatacg 29184096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 7097761 - 7097823
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    ||||||| | ||||||||||||||||||||||||| || || ||||||  |||| ||||||||    
T  7097761 aagggcagcatggtgcactaaagctcccgcatacgcagggttcgggaaggggtctcaccattt 7097823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 200 - 234
Target Start/End: Complemental strand, 19438802 - 19438768
Alignment:
Q  200 ataagggcaacctggtgcactaaagctcccgcata 234  Q
    |||||||||||||||||||||| ||||||||||||    
T  19438802 ataagggcaacctggtgcactagagctcccgcata 19438768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 28516434 - 28516496
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||||||| |||||||||||| |||| || || ||  |||||| |||||||||||||    
T  28516434 aagggcaacctggtccactaaagctcctgcatgcgcagggtctgggaatgggtcccaccattt 28516496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 32703556 - 32703494
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| ||||||||| |||||||||||| | || || ||||||  |||||||||||||    
T  32703556 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 32703494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 43334338 - 43334277
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| ||||||||||||||||||||| || || || ||||||  |||||||||||||    
T  43334338 aagggcaacccggtgcactaaagctcccgcat-cgcagggtccgggaaggggtcccaccattt 43334277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 32354261 - 32354228
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatac 235  Q
    |||||||||| |||||||||||||||||||||||    
T  32354261 aagggcaacccggtgcactaaagctcccgcatac 32354228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 39801647 - 39801591
Alignment:
Q  205 ggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccacca 261  Q
    ||||||| |||||||||||||||||||||||| || ||  |||||  ||||||||||    
T  39801647 ggcaacccggtgcactaaagctcccgcatacgtagggtctgggaaggggtcccacca 39801591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 41014452 - 41014420
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcata 234  Q
    |||||||||| ||||||||||||||||||||||    
T  41014452 aagggcaacccggtgcactaaagctcccgcata 41014420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 20639659 - 20639721
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| |||||||||||||||||||||||| || || ||||||  |||||||||||||    
T  20639659 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 20639721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 44363131 - 44363193
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| |||||||||||||||||||||||| || || ||||||  |||||||||||||    
T  44363131 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 44363193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 38755909 - 38755970
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    |||||||||| |||||||||||||||||||||||| || || ||||||  ||||||||||||    
T  38755909 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 38755970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 200 - 264
Target Start/End: Original strand, 6430625 - 6430689
Alignment:
Q  200 ataagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||||| ||||| |||||||||||||||||| || || ||||||  |||||||||||||    
T  6430625 ataagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaagtggtcccaccattt 6430689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 261
Target Start/End: Original strand, 30690177 - 30690236
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccacca 261  Q
    ||||||| ||||||||||||||||||||||||||| || || ||||||  ||||||||||    
T  30690177 aagggcagcctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca 30690236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 11394986 - 11394924
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| |||||||||||||||||||||||| || || ||| ||  |||||||||||||    
T  11394986 aagggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccattt 11394924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 11404713 - 11404651
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| |||||||||||||||||||||||| || || ||| ||  |||||||||||||    
T  11404713 aagggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccattt 11404651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 14983968 - 14983906
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    ||||||||| |||| |||||||||||||||||||| || || ||||||  |||||||||||||    
T  14983968 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 14983906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 20908637 - 20908699
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    ||||||| ||| ||||||||||||||||||||||| || || ||||||  |||||||||||||    
T  20908637 aagggcagccttgtgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattt 20908699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 25629183 - 25629121
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| |||||||||||||||||||||| | || || ||||||  |||||||||||||    
T  25629183 aagggcaacccggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccaccattt 25629121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 23501923 - 23501862
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    |||||||||| |||||||||||||||||||||| | || || ||||||  ||||||||||||    
T  23501923 aagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccatt 23501862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 33836488 - 33836549
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    |||||||||| | |||||||||||||||||||||| || || ||||||  ||||||||||||    
T  33836488 aagggcaacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 33836549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 262
Target Start/End: Complemental strand, 32484367 - 32484307
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccat 262  Q
    |||||||||| |||||||||||||||||||||| | || || ||||||  |||||||||||    
T  32484367 aagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccat 32484307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 249
Target Start/End: Complemental strand, 35532135 - 35532079
Alignment:
Q  193 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaa 249  Q
    ||||| || |||||||||| |||||||||||||||||||||||| || || ||||||    
T  35532135 aaaaaaaaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 35532079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 202 - 262
Target Start/End: Original strand, 40553938 - 40553998
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccat 262  Q
    |||||||||| |||||||||||||||||||||||| || || ||||||  |||| ||||||    
T  40553938 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcacaccat 40553998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 210 - 249
Target Start/End: Original strand, 37038132 - 37038171
Alignment:
Q  210 cctggtgcactaaagctcccgcatacgaagtgtacgggaa 249  Q
    ||||||||||||||||||||||||||| || |||||||||    
T  37038132 cctggtgcactaaagctcccgcatacgcagggtacgggaa 37038171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 5648392 - 5648330
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    ||||||||||  ||||||| ||||||||||||||| || || ||||||  |||||||||||||    
T  5648392 aagggcaacccagtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccattt 5648330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 20225116 - 20225054
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| ||||||||| |||||||||||| | || || ||||||  |||||||||||||    
T  20225116 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 20225054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 30352581 - 30352643
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||  |||||||||||||||||||||||| || || || |||  |||||||||||||    
T  30352581 aagggcaacacggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccattt 30352643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 35567304 - 35567242
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    ||||||| || |||||||||||||||||||| ||| || || ||||||  |||||||||||||    
T  35567304 aagggcagcccggtgcactaaagctcccgcagacgcagggttcgggaaggggtcccaccattt 35567242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 38786743 - 38786681
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| ||||||||| |||||||||||| | || || ||||||  |||||||||||||    
T  38786743 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 38786681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 234
Target Start/End: Original strand, 8473620 - 8473653
Alignment:
Q  201 taagggcaacctggtgcactaaagctcccgcata 234  Q
    ||||||||||| ||||||||||||||||||||||    
T  8473620 taagggcaacccggtgcactaaagctcccgcata 8473653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 20225210 - 20225149
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    |||||||||| |||||||||||||||||||||| |  | || ||||||  ||||||||||||    
T  20225210 aagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 20225149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 25388310 - 25388249
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    |||||||||| |||||||||||||||  ||||||| || || ||||||  ||||||||||||    
T  25388310 aagggcaacccggtgcactaaagctcatgcatacgcagggtccgggaaggggtcccaccatt 25388249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 264
Target Start/End: Original strand, 29207900 - 29207961
Alignment:
Q  203 agggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    ||||||||| ||||||||| |||||||||||| | || || ||||||  |||||||||||||    
T  29207900 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 29207961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 199 - 264
Target Start/End: Complemental strand, 40915965 - 40915900
Alignment:
Q  199 aataagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    ||||||||||| | |||||||| ||||||||||||||| || || ||||||  | |||||||||||    
T  40915965 aataagggcaatccggtgcactgaagctcccgcatacgcagggtccgggaagggctcccaccattt 40915900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 264
Target Start/End: Original strand, 7909280 - 7909344
Alignment:
Q  201 taagggcaacctggtgcactaaagct-cccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    ||||||||||| | |||||||||||| |||||||||| || || ||||||  |||||||||||||    
T  7909280 taagggcaacccgatgcactaaagctccccgcatacgcagggttcgggaaggggtcccaccattt 7909344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 16408602 - 16408634
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcata 234  Q
    |||||||||| ||||||||||||||||||||||    
T  16408602 aagggcaacccggtgcactaaagctcccgcata 16408634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 56323034 - 56323002
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcata 234  Q
    |||||||||| ||||||||||||||||||||||    
T  56323034 aagggcaacccggtgcactaaagctcccgcata 56323002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 4349795 - 4349733
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| |||||||||||||||||||||||| || || ||||||  |||||||||||||    
T  4349795 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 4349733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 19414594 - 19414532
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| ||||||||| |||||||||||| | || |||||||||  |||||||||||||    
T  19414594 aagggcaacccggtgcactagagctcccgcatatgcagggtacgggaaggggtcccaccattt 19414532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 35005282 - 35005220
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| ||||||||||||| |||||||||| || || ||||||  |||||||||||||    
T  35005282 aagggcaacccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccattt 35005220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 46247954 - 46248016
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| ||| |||||||||||||||||||| || || ||||||  |||||||||||||    
T  46247954 aagggcaacccggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 46248016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 50606560 - 50606498
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| |||||||||||||||||||||| | || || ||||||  |||||||||||||    
T  50606560 aagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattt 50606498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 10668384 - 10668323
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    |||||||||| |||||||||||||||||||||||| || |  ||||||  ||||||||||||    
T  10668384 aagggcaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccatt 10668323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 27474437 - 27474376
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    |||||||| | |||||||||||||||||||||||| || || ||||||  ||||||||||||    
T  27474437 aagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 27474376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 264
Target Start/End: Complemental strand, 45402251 - 45402191
Alignment:
Q  204 gggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||| |||||||||||||||||||||||| || ||  |||||  |||||||||||||    
T  45402251 gggcaacccggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccattt 45402191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 263
Target Start/End: Complemental strand, 46991959 - 46991900
Alignment:
Q  204 gggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    |||||||| ||||||||||||||||| |||||| || || ||||||  ||||||||||||    
T  46991959 gggcaacccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccatt 46991900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 18944803 - 18944741
Alignment:
Q  202 aagggcaacctggtgcactaaa-gctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    |||||||||| ||||||||||| ||||||||||||| || || ||||||  ||||||||||||    
T  18944803 aagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 18944741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 264
Target Start/End: Complemental strand, 19701720 - 19701666
Alignment:
Q  210 cctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    ||||||||||||||||||||||||||| || || ||||||  || ||||||||||    
T  19701720 cctggtgcactaaagctcccgcatacgcagggtccgggaaggggccccaccattt 19701666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 34725099 - 34725161
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| ||||||||| |||||||||||| | || || ||||||  |||||||||||||    
T  34725099 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 34725161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 42304208 - 42304270
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||| | ||||||||||||||||| |||||| || || ||||||  |||||||||||||    
T  42304208 aagggcaatccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattt 42304270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 4587561 - 4587626
Alignment:
Q  199 aataagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||| |||||| |||||||| ||||||||||||| | || || ||||||  |||||||||||||    
T  4587561 aataagagcaacccggtgcactgaagctcccgcataggcagggtccgggaaggggtcccaccattt 4587626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 22325049 - 22325016
Alignment:
Q  203 agggcaacctggtgcactaaagctcccgcatacg 236  Q
    |||||| |||||||||||||||||||||||||||    
T  22325049 agggcagcctggtgcactaaagctcccgcatacg 22325016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 20004091 - 20004123
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcata 234  Q
    |||||||||| ||||||||||||||||||||||    
T  20004091 aagggcaacccggtgcactaaagctcccgcata 20004123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 29355856 - 29355917
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    |||||||||| |||||||||||||||||||||||| || || ||||||  ||||||||||||    
T  29355856 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 29355917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 263
Target Start/End: Complemental strand, 6808538 - 6808468
Alignment:
Q  193 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    ||||| || |||||||||| |||||||||||||||||||||||  || || ||||||  ||||||||||||    
T  6808538 aaaaagaaaaagggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggggtcccaccatt 6808468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 9161258 - 9161197
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    ||||||||||||||||||||||||| ||||||||| || || || |||  ||||||||||||    
T  9161258 aagggcaacctggtgcactaaagcttccgcatacgcagggtccgagaaggggtcccaccatt 9161197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 1347096 - 1347034
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| ||||||||| |||||||||||| | || || ||||||  |||||||||||||    
T  1347096 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 1347034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 1354758 - 1354820
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| ||||||||| |||||||||||| | || || ||||||  |||||||||||||    
T  1354758 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 1354820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 12221915 - 12221977
Alignment:
Q  202 aagggcaacctggtgcactaaa-gctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    |||||||||| ||||||||||| ||||||||||||| || || ||||||  ||||||||||||    
T  12221915 aagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 12221977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 12886047 - 12885985
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| ||||||||||||||||| |||||| || ||  |||||  |||||||||||||    
T  12886047 aagggcaacccggtgcactaaagctcccacatacgcagggtctgggaaggggtcccaccattt 12885985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 13267859 - 13267797
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| |||||||| ||||||||||||||| || || | ||||  |||||||||||||    
T  13267859 aagggcaacccggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 13267797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 24097711 - 24097649
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||||||  |||||||||| ||||||||| || || ||||||  |||||||||||||    
T  24097711 aagggcaacctgggacactaaagcttccgcatacgcagggtccgggaaggggtcccaccattt 24097649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 12892143 - 12892082
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    |||||||||| |||||||||||||||||||||| |  | || ||||||  ||||||||||||    
T  12892143 aagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 12892082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 264
Target Start/End: Original strand, 3815084 - 3815140
Alignment:
Q  208 aacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||| |||||||||||||| ||||||||| || || ||||||  |||||||||||||    
T  3815084 aacccggtgcactaaagcttccgcatacgtagggttcgggaaagggtcccaccattt 3815140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000002; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 7879781 - 7879710
Alignment:
Q  193 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    ||||| || |||||||||| |||||||| ||||||||||||||| || || ||||||  |||||||||||||    
T  7879781 aaaaaaaaaaagggcaacccggtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccattt 7879710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 202 - 249
Target Start/End: Original strand, 45018924 - 45018971
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaa 249  Q
    ||||||||||||||||||||||||||||||||||| || || ||||||    
T  45018924 aagggcaacctggtgcactaaagctcccgcatacgcagggtccgggaa 45018971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 38262197 - 38262259
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||| | |||||||||||||||||||||||| ||||| ||||||  ||||||| |||||    
T  38262197 aagggcaatccggtgcactaaagctcccgcatacgcagtgttcgggaaggggtcccatcattt 38262259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 2541020 - 2541082
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    ||||| |||| |||||||||||||||||||||||| || |  ||||||  |||||||||||||    
T  2541020 aagggaaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattt 2541082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 21172010 - 21172072
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| ||||||||| |||||||||||| | || || ||||||  |||||||||||||    
T  21172010 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 21172072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 27889317 - 27889379
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| |||| || |||||||||||||||| || || ||||||  |||||||||||||    
T  27889317 aagggcaacccggtgtaccaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 27889379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 32758393 - 32758331
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| ||||||||| |||||||||||| | || || ||||||  |||||||||||||    
T  32758393 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 32758331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Complemental strand, 36602581 - 36602547
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacg 236  Q
    |||||||||| ||||||||||||||||||||||||    
T  36602581 aagggcaacccggtgcactaaagctcccgcatacg 36602547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 42391101 - 42391163
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| ||||||||| |||||||||||| | || || ||||||  |||||||||||||    
T  42391101 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 42391163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 48735123 - 48735185
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| ||||||||| |||||||||||| | || || ||||||  |||||||||||||    
T  48735123 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 48735185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 199 - 264
Target Start/End: Original strand, 11617586 - 11617651
Alignment:
Q  199 aataagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    ||||||||||||| |||||||||||| ||| ||||||| || || | ||||  |||||||||||||    
T  11617586 aataagggcaacccggtgcactaaaggtcctgcatacgcagggtccaggaaggggtcccaccattt 11617651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 235
Target Start/End: Complemental strand, 29907552 - 29907519
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatac 235  Q
    |||||||||| |||||||||||||||||||||||    
T  29907552 aagggcaacccggtgcactaaagctcccgcatac 29907519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 263
Target Start/End: Complemental strand, 42805660 - 42805599
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    |||||||||| |||||||||||||||||||||| |  | || ||||||  ||||||||||||    
T  42805660 aagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccatt 42805599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 11741936 - 11741896
Alignment:
Q  193 aaaaacaataagggcaacctggtgcactaaagctcccgcat 233  Q
    |||||| |||||||||||| ||||||||| |||||||||||    
T  11741936 aaaaactataagggcaacccggtgcactagagctcccgcat 11741896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 263
Target Start/End: Original strand, 18512455 - 18512515
Alignment:
Q  203 agggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    |||||||||  |||||| |||||||||||||||| || || ||||||  ||||||||||||    
T  18512455 agggcaacccagtgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 18512515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 263
Target Start/End: Original strand, 35334818 - 35334878
Alignment:
Q  203 agggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    |||| |||| |||||||||||||||| ||||||| || || ||||||  ||||||||||||    
T  35334818 agggaaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccatt 35334878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 42477005 - 42476973
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcata 234  Q
    |||||||||||||||||||| ||||||||||||    
T  42477005 aagggcaacctggtgcactagagctcccgcata 42476973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 236
Target Start/End: Original strand, 72868 - 72902
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacg 236  Q
    |||||||||||||||||||||||||||||||||||    
T  72868 aagggcaacctggtgcactaaagctcccgcatacg 72902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.00000000009; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 12626024 - 12625962
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| |||||||||||||||||||||||| || || |||||   |||||||||||||    
T  12626024 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggagggggtcccaccattt 12625962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 28407537 - 28407475
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| |||||| ||||||||||||||||| || || ||||||  |||||||||||||    
T  28407537 aagggcaacccggtgcagtaaagctcccgcatacgtagggtccgggaaggggtcccaccattt 28407475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 35261813 - 35261751
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| |||||||||||||||||||||||| || || | ||||  |||||||||||||    
T  35261813 aagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccattt 35261751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 36720930 - 36720868
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| |||||||||||||| ||||||||| || || ||||||  |||||||||||||    
T  36720930 aagggcaaccgggtgcactaaagcttccgcatacgcagggtccgggaaggggtcccaccattt 36720868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 200 - 261
Target Start/End: Complemental strand, 27508046 - 27507985
Alignment:
Q  200 ataagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccacca 261  Q
    |||||| ||||| |||||||||||||||||||||||| || || ||||||  ||||||||||    
T  27508046 ataaggacaacccggtgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca 27507985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 28817627 - 28817688
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    |||||||||| | |||||||||||||||||||||| || || ||||||  ||||||||||||    
T  28817627 aagggcaacccgatgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 28817688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 29877227 - 29877166
Alignment:
Q  203 agggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||| ||||||||||||| ||||||||||||| || || ||||||  |||||||||||||    
T  29877227 agggcagcctggtgcactaacgctcccgcatacgcagggtccgggaaggggtcccaccattt 29877166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 39460995 - 39461056
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    |||||||||| |||||||||||||||||||||||| || || ||||||  |||| |||||||    
T  39460995 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccatt 39461056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 264
Target Start/End: Complemental strand, 45071400 - 45071336
Alignment:
Q  200 ataagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||||| |||||||| ||||||||||||||| |  || ||||||  |||||||||||||    
T  45071400 ataagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccattt 45071336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 202 - 249
Target Start/End: Original strand, 27468093 - 27468140
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaa 249  Q
    |||||||||| |||||||||||||||||||||||| || || ||||||    
T  27468093 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 27468140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 8897765 - 8897827
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| |||||| ||||||||||||||| | || || ||||||  |||||||||||||    
T  8897765 aagggcaaccgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccaccattt 8897827  T

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Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 236
Target Start/End: Complemental strand, 10857963 - 10857929
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacg 236  Q
    |||||||||| ||||||||||||||||||||||||    
T  10857963 aagggcaacccggtgcactaaagctcccgcatacg 10857929  T

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Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 13160835 - 13160773
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| || ||||| ||||||||||||||| || || ||||||  |||||||||||||    
T  13160835 aagggcaacccggcgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccattt 13160773  T

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Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 26102651 - 26102589
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| ||||||||| |||||||||||| | || || ||||||  |||||||||||||    
T  26102651 aagggcaacccggtgcactagagctcccgcataagcagggtccgggaaggggtcccaccattt 26102589  T

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Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 30454098 - 30454160
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| ||||||||| |||||||||||| | || || ||||||  |||||||||||||    
T  30454098 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 30454160  T

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Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 35107312 - 35107374
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| |||||||||||||| ||||||||  || || ||||||  |||||||||||||    
T  35107312 aagggcaacccggtgcactaaagcttccgcatacacagcgtccgggaaggggtcccaccattt 35107374  T

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Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 44530283 - 44530221
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||| ||||| |||||||||||||||||||||||| || || | ||||  |||||||||||||    
T  44530283 aaggtcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccattt 44530221  T

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Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 20870068 - 20870027
Alignment:
Q  193 aaaaacaataagggcaacctggtgcactaaagctcccgcata 234  Q
    ||||| || |||||||||| ||||||||||||||||||||||    
T  20870068 aaaaaaaaaaagggcaacccggtgcactaaagctcccgcata 20870027  T

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Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 234
Target Start/End: Complemental strand, 6760958 - 6760926
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcata 234  Q
    |||||||||| ||||||||||||||||||||||    
T  6760958 aagggcaacccggtgcactaaagctcccgcata 6760926  T

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Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 249
Target Start/End: Original strand, 18164764 - 18164808
Alignment:
Q  205 ggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaa 249  Q
    ||||||| |||||||||||||||||||||||| || || ||||||    
T  18164764 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 18164808  T

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Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 20284075 - 20284131
Alignment:
Q  207 caacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    ||||| ||||||||||| |||||||||||| || || ||||||  ||||||||||||    
T  20284075 caacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccatt 20284131  T

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Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 263
Target Start/End: Original strand, 21070703 - 21070759
Alignment:
Q  207 caacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    ||||| ||||||||||| |||||||||||| || || ||||||  ||||||||||||    
T  21070703 caacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccatt 21070759  T

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Target: scaffold1176 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 205 - 236
Target Start/End: Original strand, 1591 - 1622
Alignment:
Q  205 ggcaacctggtgcactaaagctcccgcatacg 236  Q
    ||||||||||||||||||||||||||||||||    
T  1591 ggcaacctggtgcactaaagctcccgcatacg 1622  T

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Target: scaffold0311 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 264
Target Start/End: Complemental strand, 10932 - 10882
Alignment:
Q  214 gtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    ||||||||||||||||||||||| || || ||||||  |||||||||||||    
T  10932 gtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 10882  T

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Target: scaffold0223 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 11263 - 11201
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||||||||||||| |||||||||||| | || || ||||||   ||||||||||||    
T  11263 aagggcaacctggtgcactagagctcccgcatatgcagggtccgggaaggtgtcccaccattt 11201  T

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Target: scaffold0168 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 30711 - 30649
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| ||||||||| |||||||||||| | || || ||||||  |||||||||||||    
T  30711 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 30649  T

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Target: scaffold0049 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 59113 - 59051
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| | |||||||||||||||||||||| || ||  |||||  |||||||||||||    
T  59113 aagggcaacccgatgcactaaagctcccgcatacgcagagtctgggaaggggtcccaccattt 59051  T

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Target: scaffold0015 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 48635 - 48697
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccattt 264  Q
    |||||||||| ||||||||| |||||||||||| | || || ||||||  |||||||||||||    
T  48635 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 48697  T

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Target: scaffold0258 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 263
Target Start/End: Original strand, 13025 - 13086
Alignment:
Q  202 aagggcaacctggtgcactaaagctcccgcatacgaagtgtacgggaatcggtcccaccatt 263  Q
    |||||||||| ||||||||||||| |||||||||| || ||  |||||  ||||||||||||    
T  13025 aagggcaacccggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccaccatt 13086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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