View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14031_low_48 (Length: 256)
Name: NF14031_low_48
Description: NF14031
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14031_low_48 |
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Alignment Details
Target: chr2 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 20 - 247
Target Start/End: Original strand, 6948675 - 6948905
Alignment:
| Q |
20 |
aaactggattcaagtcaatgactaatttttatttgtattatttacatactactt---aaaatatgcgatcctaacacgctcgtgggtgccttgttgagga |
116 |
Q |
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| T |
6948675 |
aaactggattcaagtcaatgactaatttttatttgtattatttacatactacttcttaaaatatgctatcctaacacgctcgtgggtgccttgttgagaa |
6948774 |
T |
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| Q |
117 |
ttaatgattgtagcatgctcttgaatgaactttttagctactttctatcccaaaatcaaactaaaagtgcattctcattgagagtgattggccaattttt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6948775 |
ttaatgattgtagcatgctcttgaatgaactttttagctactttctatcccaaaatcaaactaaaagtgcattctcattgagagtgattggccaattttt |
6948874 |
T |
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| Q |
217 |
tcattcatgtcatcattttctatagtataat |
247 |
Q |
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|||||||||||||||||||||||| |||||| |
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| T |
6948875 |
tcattcatgtcatcattttctataatataat |
6948905 |
T |
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