View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14031_low_57 (Length: 227)

Name: NF14031_low_57
Description: NF14031
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14031_low_57
NF14031_low_57
[»] chr6 (26 HSPs)
chr6 (60-211)||(54364-54515)
chr6 (13-60)||(18773648-18773695)
chr6 (13-59)||(19368593-19368639)
chr6 (13-59)||(13173032-13173078)
chr6 (13-61)||(21749289-21749337)
chr6 (13-61)||(21749877-21749925)
chr6 (13-57)||(28225421-28225465)
chr6 (13-60)||(8447215-8447262)
chr6 (13-60)||(8456019-8456066)
chr6 (13-59)||(5999658-5999704)
chr6 (25-63)||(12202379-12202417)
chr6 (13-59)||(19367712-19367758)
chr6 (13-59)||(19655053-19655099)
chr6 (16-61)||(22299981-22300026)
chr6 (13-57)||(28226493-28226538)
chr6 (13-61)||(33328368-33328416)
chr6 (13-60)||(8224413-8224460)
chr6 (13-60)||(11104452-11104499)
chr6 (13-60)||(12202191-12202238)
chr6 (13-60)||(22298598-22298645)
chr6 (13-59)||(12203346-12203392)
chr6 (13-59)||(17916544-17916590)
chr6 (16-62)||(31738355-31738401)
chr6 (13-61)||(2138712-2138760)
chr6 (13-57)||(26584112-26584156)
chr6 (16-60)||(33807683-33807727)
[»] chr7 (53 HSPs)
chr7 (13-60)||(41127246-41127293)
chr7 (13-61)||(35480201-35480249)
chr7 (13-59)||(41616619-41616665)
chr7 (13-62)||(36673911-36673960)
chr7 (13-57)||(30224051-30224095)
chr7 (13-57)||(34558376-34558420)
chr7 (13-61)||(41126232-41126280)
chr7 (13-60)||(8439760-8439807)
chr7 (13-59)||(7345909-7345955)
chr7 (13-63)||(10338388-10338438)
chr7 (13-62)||(40501225-40501274)
chr7 (13-58)||(41618574-41618619)
chr7 (13-57)||(2903041-2903085)
chr7 (25-65)||(6772717-6772757)
chr7 (13-61)||(32610677-32610725)
chr7 (13-61)||(37373527-37373575)
chr7 (13-61)||(43705459-43705507)
chr7 (13-60)||(1885316-1885363)
chr7 (13-60)||(10338181-10338228)
chr7 (13-60)||(18801209-18801256)
chr7 (13-60)||(33228841-33228888)
chr7 (13-56)||(38001502-38001545)
chr7 (13-63)||(6773465-6773515)
chr7 (13-59)||(18668758-18668804)
chr7 (16-66)||(21171283-21171333)
chr7 (13-59)||(34557392-34557438)
chr7 (13-59)||(36702772-36702818)
chr7 (13-59)||(38002589-38002635)
chr7 (13-59)||(43704603-43704649)
chr7 (16-61)||(1904098-1904143)
chr7 (13-61)||(18670578-18670626)
chr7 (16-56)||(21171564-21171604)
chr7 (13-65)||(43705617-43705669)
chr7 (13-57)||(43935182-43935226)
chr7 (13-57)||(48755623-48755667)
chr7 (13-60)||(2904122-2904169)
chr7 (25-60)||(4229090-4229125)
chr7 (13-60)||(29754761-29754808)
chr7 (13-60)||(30222640-30222687)
chr7 (13-56)||(37725877-37725920)
chr7 (13-60)||(40501530-40501577)
chr7 (13-60)||(47809484-47809531)
chr7 (25-59)||(1884235-1884269)
chr7 (13-59)||(19278348-19278394)
chr7 (139-209)||(31888372-31888442)
chr7 (13-59)||(38778972-38779018)
chr7 (16-61)||(46675012-46675057)
chr7 (30-58)||(6773313-6773341)
chr7 (29-61)||(7347311-7347343)
chr7 (13-49)||(19848909-19848945)
chr7 (16-60)||(28648284-28648328)
chr7 (13-61)||(33341291-33341339)
chr7 (25-61)||(47810226-47810262)
[»] chr4 (43 HSPs)
chr4 (13-63)||(29833363-29833413)
chr4 (13-60)||(30672139-30672186)
chr4 (13-63)||(15446745-15446795)
chr4 (13-59)||(29834507-29834553)
chr4 (13-61)||(12396949-12396997)
chr4 (18-65)||(52880802-52880849)
chr4 (13-59)||(937173-937219)
chr4 (13-59)||(15445431-15445477)
chr4 (16-65)||(3217687-3217736)
chr4 (13-60)||(44690930-44690978)
chr4 (8-60)||(53401521-53401573)
chr4 (25-61)||(56000280-56000316)
chr4 (13-56)||(2310857-2310900)
chr4 (13-60)||(36644940-36644987)
chr4 (13-66)||(23203037-23203090)
chr4 (16-60)||(19048898-19048942)
chr4 (13-61)||(23202233-23202281)
chr4 (13-61)||(28189372-28189420)
chr4 (16-56)||(28370719-28370759)
chr4 (13-56)||(526794-526837)
chr4 (25-60)||(3528191-3528226)
chr4 (13-60)||(23202830-23202877)
chr4 (13-60)||(26202461-26202508)
chr4 (16-59)||(26428651-26428694)
chr4 (13-60)||(28509948-28509995)
chr4 (13-60)||(31711086-31711133)
chr4 (25-60)||(36645509-36645544)
chr4 (13-60)||(44664401-44664448)
chr4 (13-60)||(53400179-53400226)
chr4 (13-60)||(56297754-56297801)
chr4 (8-66)||(11113730-11113788)
chr4 (13-59)||(15317697-15317743)
chr4 (13-59)||(30670989-30671035)
chr4 (25-59)||(44655716-44655750)
chr4 (25-59)||(56001355-56001389)
chr4 (16-61)||(8516930-8516975)
chr4 (25-62)||(15317914-15317951)
chr4 (13-66)||(19049947-19049999)
chr4 (15-60)||(31712566-31712611)
chr4 (8-60)||(26791494-26791546)
chr4 (16-56)||(39135588-39135628)
chr4 (16-60)||(53177096-53177140)
chr4 (24-60)||(54374038-54374074)
[»] scaffold0177 (1 HSPs)
scaffold0177 (13-62)||(1747-1796)
[»] chr5 (42 HSPs)
chr5 (13-61)||(4568049-4568097)
chr5 (13-61)||(15510338-15510386)
chr5 (13-60)||(20991724-20991771)
chr5 (13-61)||(12937957-12938005)
chr5 (13-61)||(12952108-12952156)
chr5 (13-57)||(15613502-15613546)
chr5 (13-60)||(5061022-5061069)
chr5 (13-60)||(21306585-21306632)
chr5 (13-60)||(21314423-21314470)
chr5 (13-59)||(20988685-20988731)
chr5 (13-61)||(21389216-21389264)
chr5 (13-60)||(2472324-2472371)
chr5 (13-56)||(4566949-4566992)
chr5 (13-56)||(15509193-15509236)
chr5 (8-59)||(28236963-28237014)
chr5 (13-64)||(38471279-38471330)
chr5 (13-59)||(5062261-5062307)
chr5 (13-59)||(7345465-7345511)
chr5 (25-63)||(15153868-15153906)
chr5 (13-62)||(6914707-6914756)
chr5 (25-58)||(12951949-12951982)
chr5 (16-61)||(32411957-32412002)
chr5 (13-57)||(2472505-2472549)
chr5 (13-57)||(16802364-16802408)
chr5 (25-60)||(1982706-1982741)
chr5 (16-59)||(3076818-3076861)
chr5 (13-60)||(6914887-6914934)
chr5 (16-59)||(19050744-19050787)
chr5 (13-60)||(21387631-21387678)
chr5 (25-56)||(26912425-26912456)
chr5 (13-56)||(32521997-32522040)
chr5 (13-60)||(32780157-32780204)
chr5 (13-56)||(37371055-37371098)
chr5 (13-60)||(37380374-37380421)
chr5 (13-59)||(16802196-16802242)
chr5 (18-60)||(32415265-32415307)
chr5 (25-58)||(12937785-12937818)
chr5 (16-61)||(19051017-19051062)
chr5 (25-57)||(1982925-1982957)
chr5 (16-56)||(15154145-15154185)
chr5 (13-61)||(41905168-41905216)
chr5 (13-61)||(42979441-42979489)
[»] chr3 (62 HSPs)
chr3 (13-61)||(32973132-32973180)
chr3 (13-61)||(53047890-53047938)
chr3 (13-60)||(34901646-34901693)
chr3 (13-60)||(52292588-52292635)
chr3 (13-60)||(52705383-52705430)
chr3 (13-59)||(19579369-19579415)
chr3 (13-59)||(32974298-32974344)
chr3 (13-59)||(48035399-48035445)
chr3 (13-62)||(39288514-39288563)
chr3 (13-58)||(53347073-53347118)
chr3 (13-61)||(19579213-19579261)
chr3 (13-61)||(53342709-53342757)
chr3 (13-60)||(47855413-47855460)
chr3 (13-56)||(52293598-52293641)
chr3 (13-64)||(55442584-55442635)
chr3 (13-59)||(7583465-7583511)
chr3 (13-66)||(11220733-11220786)
chr3 (13-66)||(12105347-12105400)
chr3 (13-66)||(13041935-13041988)
chr3 (13-66)||(13050012-13050065)
chr3 (8-61)||(33563942-33563995)
chr3 (16-60)||(2225102-2225146)
chr3 (13-57)||(35633224-35633268)
chr3 (13-61)||(46987318-46987366)
chr3 (13-61)||(53049112-53049160)
chr3 (13-56)||(5416196-5416239)
chr3 (13-60)||(11483062-11483109)
chr3 (8-59)||(54109491-54109542)
chr3 (13-60)||(55443625-55443672)
chr3 (13-55)||(381954-381996)
chr3 (13-59)||(7583705-7583751)
chr3 (13-59)||(7820385-7820431)
chr3 (13-59)||(23886901-23886947)
chr3 (13-59)||(30431370-30431416)
chr3 (13-59)||(46988544-46988590)
chr3 (13-59)||(51214241-51214287)
chr3 (13-62)||(5417123-5417172)
chr3 (13-58)||(12105560-12105605)
chr3 (13-58)||(46988340-46988385)
chr3 (25-65)||(383059-383099)
chr3 (13-61)||(19283727-19283775)
chr3 (13-61)||(23886109-23886157)
chr3 (25-61)||(23886693-23886729)
chr3 (13-61)||(48825805-48825853)
chr3 (13-60)||(7822061-7822108)
chr3 (13-60)||(30431949-30431996)
chr3 (25-60)||(48254974-48255009)
chr3 (13-60)||(51213445-51213492)
chr3 (13-59)||(10987728-10987774)
chr3 (13-59)||(12106582-12106628)
chr3 (13-59)||(29536709-29536755)
chr3 (13-59)||(54654041-54654087)
chr3 (30-63)||(7575374-7575407)
chr3 (13-58)||(47854506-47854551)
chr3 (25-66)||(54752604-54752645)
chr3 (15-59)||(5810203-5810247)
chr3 (13-61)||(13997251-13997299)
chr3 (13-57)||(35835894-35835938)
chr3 (13-57)||(35892611-35892655)
chr3 (13-61)||(40502290-40502338)
chr3 (13-61)||(51213652-51213700)
chr3 (16-60)||(51400209-51400253)
[»] chr1 (54 HSPs)
chr1 (13-61)||(2236806-2236854)
chr1 (13-60)||(2238053-2238100)
chr1 (13-56)||(25889567-25889610)
chr1 (13-60)||(48974481-48974528)
chr1 (13-59)||(35683050-35683096)
chr1 (24-65)||(1873940-1873981)
chr1 (13-60)||(20953282-20953329)
chr1 (13-60)||(29001197-29001244)
chr1 (13-56)||(34531661-34531704)
chr1 (8-59)||(48973193-48973244)
chr1 (13-59)||(27690704-27690750)
chr1 (13-59)||(30548491-30548537)
chr1 (13-59)||(48934236-48934282)
chr1 (13-63)||(48935185-48935235)
chr1 (8-61)||(1061522-1061575)
chr1 (13-58)||(9123474-9123519)
chr1 (13-66)||(34532777-34532830)
chr1 (13-61)||(25866747-25866795)
chr1 (13-61)||(35684277-35684325)
chr1 (13-60)||(51760033-51760080)
chr1 (13-59)||(25865949-25865995)
chr1 (13-59)||(33850297-33850343)
chr1 (13-59)||(33943635-33943681)
chr1 (13-59)||(51424246-51424292)
chr1 (13-59)||(52370978-52371024)
chr1 (25-62)||(9575318-9575355)
chr1 (16-61)||(13641250-13641295)
chr1 (16-61)||(38458079-38458124)
chr1 (13-61)||(25866155-25866203)
chr1 (13-57)||(26056222-26056266)
chr1 (13-61)||(42244497-42244545)
chr1 (13-61)||(50678359-50678407)
chr1 (13-61)||(52371184-52371232)
chr1 (13-61)||(52371859-52371907)
chr1 (13-56)||(1872935-1872978)
chr1 (13-60)||(13642632-13642679)
chr1 (13-60)||(14312769-14312816)
chr1 (25-60)||(14390252-14390287)
chr1 (13-60)||(26054892-26054938)
chr1 (25-60)||(28309756-28309791)
chr1 (13-60)||(31860533-31860580)
chr1 (25-60)||(33941311-33941346)
chr1 (13-59)||(1061323-1061369)
chr1 (25-59)||(1898091-1898125)
chr1 (13-63)||(13567157-13567207)
chr1 (25-63)||(20171249-20171287)
chr1 (13-59)||(47511362-47511408)
chr1 (13-58)||(4387989-4388034)
chr1 (16-61)||(25035351-25035396)
chr1 (16-61)||(25040564-25040609)
chr1 (13-66)||(28999828-28999881)
chr1 (13-61)||(27115527-27115575)
chr1 (25-61)||(46280858-46280894)
chr1 (13-61)||(47512159-47512207)
[»] chr2 (44 HSPs)
chr2 (13-60)||(3254850-3254897)
chr2 (13-60)||(3665218-3665265)
chr2 (13-58)||(2305536-2305581)
chr2 (13-65)||(21541050-21541102)
chr2 (13-60)||(6706920-6706967)
chr2 (13-60)||(41312494-41312541)
chr2 (13-58)||(3255953-3255997)
chr2 (13-62)||(11392031-11392080)
chr2 (13-62)||(11408692-11408741)
chr2 (13-61)||(5564052-5564100)
chr2 (16-56)||(22653105-22653145)
chr2 (13-61)||(43015532-43015580)
chr2 (13-60)||(5565220-5565267)
chr2 (13-60)||(11391866-11391913)
chr2 (13-60)||(11408527-11408574)
chr2 (13-60)||(14482166-14482213)
chr2 (13-60)||(17859341-17859388)
chr2 (13-59)||(2306736-2306781)
chr2 (13-59)||(12852881-12852927)
chr2 (13-59)||(12854179-12854225)
chr2 (13-59)||(14573883-14573929)
chr2 (13-59)||(21545144-21545190)
chr2 (13-63)||(27264648-27264698)
chr2 (13-62)||(27262705-27262754)
chr2 (13-58)||(43019321-43019366)
chr2 (25-61)||(17179053-17179089)
chr2 (13-61)||(33836762-33836810)
chr2 (13-60)||(7038407-7038454)
chr2 (16-59)||(17179329-17179372)
chr2 (13-60)||(33837830-33837877)
chr2 (13-60)||(41295099-41295146)
chr2 (13-60)||(42246585-42246632)
chr2 (13-59)||(15268376-15268422)
chr2 (13-59)||(27657822-27657868)
chr2 (13-59)||(41313342-41313388)
chr2 (13-62)||(15816741-15816790)
chr2 (16-57)||(30202690-30202731)
chr2 (16-61)||(30202961-30203006)
chr2 (13-58)||(42772434-42772479)
chr2 (13-45)||(3666343-3666375)
chr2 (25-61)||(15269179-15269214)
chr2 (25-65)||(17858447-17858487)
chr2 (13-61)||(17858659-17858707)
chr2 (25-61)||(22901039-22901075)
[»] chr8 (29 HSPs)
chr8 (13-59)||(6844648-6844694)
chr8 (13-61)||(6843748-6843796)
chr8 (13-60)||(45385869-45385916)
chr8 (13-63)||(40102212-40102262)
chr8 (13-58)||(24706287-24706332)
chr8 (18-62)||(7565366-7565410)
chr8 (13-61)||(24068323-24068371)
chr8 (16-59)||(7561794-7561837)
chr8 (13-59)||(3271155-3271201)
chr8 (13-59)||(21551917-21551963)
chr8 (13-59)||(21552963-21553009)
chr8 (8-57)||(45384237-45384286)
chr8 (8-60)||(3237710-3237762)
chr8 (13-61)||(3271891-3271939)
chr8 (13-57)||(13360350-13360394)
chr8 (25-61)||(15988997-15989033)
chr8 (13-61)||(24703202-24703250)
chr8 (13-61)||(30864530-30864578)
chr8 (8-60)||(40103008-40103060)
chr8 (16-60)||(41178748-41178792)
chr8 (25-63)||(3612670-3612708)
chr8 (13-65)||(3237406-3237459)
chr8 (13-62)||(3272100-3272149)
chr8 (24-61)||(11081118-11081155)
chr8 (25-66)||(41178468-41178509)
chr8 (13-57)||(117045-117089)
chr8 (13-61)||(3612246-3612294)
chr8 (13-61)||(30865200-30865248)
chr8 (13-65)||(35943896-35943948)
[»] scaffold1827 (1 HSPs)
scaffold1827 (13-59)||(1133-1179)
[»] scaffold0155 (1 HSPs)
scaffold0155 (18-63)||(5160-5205)
[»] scaffold0178 (2 HSPs)
scaffold0178 (13-61)||(2340-2388)
scaffold0178 (25-59)||(1207-1241)
[»] scaffold0038 (2 HSPs)
scaffold0038 (13-57)||(25919-25963)
scaffold0038 (13-57)||(26991-27036)
[»] scaffold0839 (1 HSPs)
scaffold0839 (13-61)||(18-66)
[»] scaffold0034 (1 HSPs)
scaffold0034 (24-64)||(98039-98079)
[»] scaffold0007 (2 HSPs)
scaffold0007 (13-60)||(28333-28380)
scaffold0007 (13-61)||(28125-28173)
[»] scaffold0649 (1 HSPs)
scaffold0649 (25-66)||(3995-4036)
[»] scaffold0081 (1 HSPs)
scaffold0081 (13-62)||(1847-1895)
[»] scaffold0316 (1 HSPs)
scaffold0316 (25-61)||(11858-11894)
[»] scaffold0013 (1 HSPs)
scaffold0013 (16-60)||(96893-96937)


Alignment Details
Target: chr6 (Bit Score: 148; Significance: 3e-78; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 60 - 211
Target Start/End: Original strand, 54364 - 54515
Alignment:
Q  60 ttaattagtgtatacatactattatagttagtttacaattcctagctaactcccttccattaattgatgtataggtgtgaaatctgtggaggtgaacaga 159  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54364 ttaattagtgtatacatactaatatagttagtttacaattcctagctaactcccttccattaattgatgtataggtgtgaaatctgtggaggtgaacaga 54463  T
Q  160 aagcaaagcagggtgatagtaagtggttatgttgatccaaacaaggtgttaa 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54464 aagcaaagcagggtgatagtaagtggttatgttgatccaaacaaggtgttaa 54515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 18773695 - 18773648
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  18773695 aaatgaaatccaaaaataagttaagggatcaaagcatgtattaagcct 18773648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 19368593 - 19368639
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  19368593 aaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcc 19368639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 13173078 - 13173032
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||    
T  13173078 aaataaaatccgaaaataagttaagggaccaaagcatgtattaagcc 13173032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 21749289 - 21749337
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | |||||||||||||||||||||||||||||||| ||||    
T  21749289 aaatgaaattcaaaaataagttaagggatcaaagcatgtattaaccctt 21749337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 21749877 - 21749925
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||||    
T  21749877 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcctt 21749925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 28225465 - 28225421
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaag 57  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||    
T  28225465 aaatgaaattcgaaaataagttaagggaccaaagcatgtattaag 28225421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 8447262 - 8447215
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  8447262 aaatgaaatccgaaaataagttaagggactaaagcatatattaagcct 8447215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 8456066 - 8456019
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  8456066 aaatgaaatccgaaaataagttaagggactaaagcatatattaagcct 8456019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 5999658 - 5999704
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||    
T  5999658 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcc 5999704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 12202379 - 12202417
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagccttaa 63  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  12202379 aaaataagttaagggaccaaagcatgtattaagccttaa 12202417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 19367758 - 19367712
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||| ||||||||||||||||||  |||||||||||||||||    
T  19367758 aaatgaaattcgaaaataagttaagggacgaaagcatgtattaagcc 19367712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 19655053 - 19655099
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||    
T  19655053 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcc 19655099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 22299981 - 22300026
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||| || |||||||||||||||||||||||||||||||| ||||    
T  22299981 tgaaaaccaaaaataagttaagggatcaaagcatgtattaaacctt 22300026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 28226493 - 28226538
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaa-gcatgtattaag 57  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||    
T  28226493 aaatgaaatccgaaaataagttaacggatcaaaggcatgtattaag 28226538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 33328416 - 33328368
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | |||||||||||||||| ||||||||||||||| ||||    
T  33328416 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaaacctt 33328368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 8224413 - 8224460
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | ||| |||||||||||| |||||||||||||||||||    
T  8224413 aaatgaaattcaaaattaagttaagggaccaaagcatgtattaagcct 8224460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 11104452 - 11104499
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | |||||||||||| ||| |||||||||||||||||||    
T  11104452 aaatgaaattcaaaaataagttaaaggaccaaagcatgtattaagcct 11104499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 12202238 - 12202191
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | ||||||||||||||||  ||||||||||||||||||    
T  12202238 aaatgaaattcaaaaataagttaagggacgaaagcatgtattaagcct 12202191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 22298645 - 22298598
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||||||| || |||||||||||| ||| |||||||||||||||||||    
T  22298645 aaatgaaaaccaaaaataagttaaaggaccaaagcatgtattaagcct 22298598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 12203346 - 12203392
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||| | ||||||||||||||||  |||||||||||||||||    
T  12203346 aaatgaaattcaaaaataagttaagggactaaagcatgtattaagcc 12203392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 17916544 - 17916590
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||| | |||||||||||||||| |||||||| |||||||||    
T  17916544 aaatgaaattcaaaaataagttaagggaccaaagcatatattaagcc 17916590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 62
Target Start/End: Complemental strand, 31738401 - 31738355
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaagcctta 62  Q
    ||||| || |||||||||||||||| ||||| |||||||||||||||    
T  31738401 tgaaaaccaaaaataagttaagggaccaaaggatgtattaagcctta 31738355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 2138712 - 2138760
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||| |||||| ||||||| |||||||| |||| |||||||||||||||    
T  2138712 aaataaaatccaaaaataaattaagggaccaaaacatgtattaagcctt 2138760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 26584112 - 26584156
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaag 57  Q
    |||| ||||||||||||||||||||||| |||| |||| ||||||    
T  26584112 aaataaaatccgaaaataagttaagggaccaaaacatgcattaag 26584156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 33807727 - 33807683
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||| || |||||||||||||||||||||  |||||||||||||    
T  33807727 tgaaaaccaaaaataagttaagggatcaaataatgtattaagcct 33807683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 1e-18; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 41127246 - 41127293
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  41127246 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 41127293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 35480249 - 35480201
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  35480249 aaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcctt 35480201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 41616665 - 41616619
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  41616665 aaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcc 41616619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 36673911 - 36673960
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctta 62  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||||||    
T  36673911 aaataaaatccgaaaataagttaagggaccaaagcatgtattaagcctta 36673960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 30224051 - 30224095
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaag 57  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  30224051 aaatgaaatccgaaaataagttaagggaccaaagcatgtattaag 30224095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 34558376 - 34558420
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaag 57  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  34558376 aaatgaaatccgaaaataagttaagggaccaaagcatgtattaag 34558420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 41126280 - 41126232
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  41126280 aaatgaaatctgaaaataagttaagggaccaaagcatgtattaagcctt 41126232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 8439807 - 8439760
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  8439807 aaatgaaattcaaaaataagttaagggatcaaagcatgtattaagcct 8439760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 7345955 - 7345909
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  7345955 aaatgaaatccaaaaataagttaagggaccaaagcatgtattaagcc 7345909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 10338388 - 10338438
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagccttaa 63  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||||||    
T  10338388 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagccttaa 10338438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 40501274 - 40501225
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctta 62  Q
    ||||||||| | |||||||||||||||| |||||||||||||||||||||    
T  40501274 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcctta 40501225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 41618574 - 41618619
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagc 58  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||    
T  41618574 aaatgaaatccaaaaataagttaagggaccaaagcatgtattaagc 41618619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 2903085 - 2903041
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaag 57  Q
    |||||||||||||||||||||||||| | ||||||||||||||||    
T  2903085 aaatgaaatccgaaaataagttaaggtaccaaagcatgtattaag 2903041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 6772757 - 6772717
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagccttaatt 65  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  6772757 aaaataagttaagggaccaaagcatgtattaagccttaatt 6772717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 32610725 - 32610677
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||||    
T  32610725 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcctt 32610677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 37373575 - 37373527
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||||    
T  37373575 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcctt 37373527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 43705507 - 43705459
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||||    
T  43705507 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcctt 43705459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 1885316 - 1885363
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | |||||||||||||||| |||||||||||||||||||    
T  1885316 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcct 1885363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 10338228 - 10338181
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | |||||||||||||||| |||||||||||||||||||    
T  10338228 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcct 10338181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 18801256 - 18801209
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | |||||||||||||||| |||||||||||||||||||    
T  18801256 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcct 18801209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 33228888 - 33228841
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | |||||||||||||||| |||||||||||||||||||    
T  33228888 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcct 33228841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 38001545 - 38001502
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaa 56  Q
    ||||||||| |||||||||||||||||| |||||||||||||||    
T  38001545 aaatgaaattcgaaaataagttaagggaccaaagcatgtattaa 38001502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 6773465 - 6773515
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagccttaa 63  Q
    ||||||||| | |||||||||||||||| ||||| ||||||||||||||||    
T  6773465 aaatgaaattcaaaaataagttaagggaccaaagtatgtattaagccttaa 6773515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 18668804 - 18668758
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||    
T  18668804 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcc 18668758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 21171333 - 21171283
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaagccttaatta 66  Q
    |||||| | |||||||||||||||| ||||||||||||||||||| |||||    
T  21171333 tgaaattcaaaaataagttaagggaccaaagcatgtattaagcctaaatta 21171283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 34557438 - 34557392
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||| ||||||||||||||||||||| | ||||||||||||||||||    
T  34557438 aaataaaatccgaaaataagttaaggaaccaaagcatgtattaagcc 34557392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 36702818 - 36702772
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||||  |||||||||||||||| ||||||||||||||||||    
T  36702818 aaatgaaatctaaaaataagttaagggaccaaagcatgtattaagcc 36702772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 38002589 - 38002635
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||||||||| |||||||||||||| || ||||||||||||||||||    
T  38002589 aaatgaaatctgaaaataagttaagagaccaaagcatgtattaagcc 38002635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 43704649 - 43704603
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||    
T  43704649 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcc 43704603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 1904098 - 1904143
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||||| |||||||||||||||| ||||||||||||||| ||||    
T  1904098 tgaaatccaaaaataagttaagggaccaaagcatgtattaaacctt 1904143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 18670578 - 18670626
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||| |||||| |||||||||||||||| ||||| ||||||||||||||    
T  18670578 aaataaaatccaaaaataagttaagggaccaaaggatgtattaagcctt 18670626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 21171564 - 21171604
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaa 56  Q
    |||||||| |||||||||||||||| |||||||||||||||    
T  21171564 tgaaatccaaaaataagttaagggaccaaagcatgtattaa 21171604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 43705617 - 43705669
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagccttaatt 65  Q
    ||||||||| | |||||||||||||||| |||| |||||||||||||| ||||    
T  43705617 aaatgaaattcaaaaataagttaagggaccaaaacatgtattaagcctaaatt 43705669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 43935226 - 43935182
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaag 57  Q
    ||||||||||| |||||||||||||||| |||||||| |||||||    
T  43935226 aaatgaaatccaaaaataagttaagggaccaaagcatatattaag 43935182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 48755623 - 48755667
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaag 57  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||    
T  48755623 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaag 48755667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 2904122 - 2904169
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||||||||  |||||||| |||||||| |||||||||||||||||||    
T  2904122 aaatgaaatttgaaaataaattaagggaccaaagcatgtattaagcct 2904169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 4229125 - 4229090
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||||||||||||||||||||||| ||||||    
T  4229125 aaaataagttaagggatcaaagcatgtatcaagcct 4229090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 29754761 - 29754808
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | |||||||||||||||| |||||||| ||||||||||    
T  29754761 aaatgaaattcaaaaataagttaagggaccaaagcatatattaagcct 29754808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 30222687 - 30222640
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||||| ||||||| |||| ||| |||||||||||||||||||    
T  30222687 aaatgaaatccaaaaataaattaaaggaccaaagcatgtattaagcct 30222640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 37725920 - 37725877
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaa 56  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  37725920 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaa 37725877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 40501530 - 40501577
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | ||||||||||||||||  ||||||||||||||||||    
T  40501530 aaatgaaattcaaaaataagttaagggactaaagcatgtattaagcct 40501577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 47809531 - 47809484
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | ||||||| |||||||| |||||||||||||||||||    
T  47809531 aaatgaaattcaaaaataaattaagggaccaaagcatgtattaagcct 47809484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 59
Target Start/End: Complemental strand, 1884269 - 1884235
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||||||||||||||| ||||||||||||||||||    
T  1884269 aaaataagttaagggaccaaagcatgtattaagcc 1884235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 19278394 - 19278348
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||||| |||||||||||||||| ||||  ||||||||||||    
T  19278394 aaatgaaatccaaaaataagttaagggaccaaatgatgtattaagcc 19278348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 139 - 209
Target Start/End: Original strand, 31888372 - 31888442
Alignment:
Q  139 aaatctgtggaggtgaacagaaagcaaagcagggtgatagtaagtggttatgttgatccaaacaaggtgtt 209  Q
    |||||||||||| | ||| |||||||||||| ||| | ||| | ||||| |||||||||||||| ||||||    
T  31888372 aaatctgtggagataaaccgaaagcaaagcaaggtaacagtgaatggttttgttgatccaaacatggtgtt 31888442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 38779018 - 38778972
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||| | |||||| ||||||||| ||||||||||||||||||    
T  38779018 aaatgaaattcaaaaatatgttaagggaccaaagcatgtattaagcc 38778972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 46675012 - 46675057
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||| || |||||||||||||||||||||  ||||||||||||||    
T  46675012 tgaaaaccaaaaataagttaagggatcaaatgatgtattaagcctt 46675057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 30 - 58
Target Start/End: Complemental strand, 6773341 - 6773313
Alignment:
Q  30 aagttaagggatcaaagcatgtattaagc 58  Q
    |||||||||||||||||||||||||||||    
T  6773341 aagttaagggatcaaagcatgtattaagc 6773313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 29 - 61
Target Start/End: Original strand, 7347311 - 7347343
Alignment:
Q  29 taagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||||||||| ||||||||||||||||||||    
T  7347311 taagttaagggaccaaagcatgtattaagcctt 7347343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 49
Target Start/End: Original strand, 19848909 - 19848945
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcat 49  Q
    ||||||||||| |||||||||||||||| ||||||||    
T  19848909 aaatgaaatccaaaaataagttaagggaccaaagcat 19848945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 28648328 - 28648284
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||||||| ||| |||||||||||| |||| ||||||||||||||    
T  28648328 tgaaatccaaaattaagttaagggaccaaaacatgtattaagcct 28648284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 33341339 - 33341291
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||| |||||| ||||||||||||| || |||| |||||||||||||||    
T  33341339 aaataaaatccaaaaataagttaagagaccaaatcatgtattaagcctt 33341291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 47810226 - 47810262
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||||||||||||| |||| |||||||||||||||    
T  47810226 aaaataagttaagggaccaaaacatgtattaagcctt 47810262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 5e-18; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 29833413 - 29833363
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagccttaa 63  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29833413 aaatgaaatccgaaaataagttaagggaccaaagcatgtattaagccttaa 29833363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 30672139 - 30672186
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||    
T  30672139 aaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcct 30672186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 15446745 - 15446795
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagccttaa 63  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||||||    
T  15446745 aaatgaaatccaaaaataagttaagggaccaaagcatgtattaagccttaa 15446795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 29834507 - 29834553
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  29834507 aaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcc 29834553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 12396949 - 12396997
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||||||||||||||||||||||||| |||| |||||||||||||||    
T  12396949 aaatgaaatccgaaaataagttaagggaccaaaacatgtattaagcctt 12396997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 18 - 65
Target Start/End: Complemental strand, 52880849 - 52880802
Alignment:
Q  18 aaatccgaaaataagttaagggatcaaagcatgtattaagccttaatt 65  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  52880849 aaatccgaaaataagttaagggagcaaagcatgtattaagcctaaatt 52880802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 937173 - 937219
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||    
T  937173 aaatgaaatccgaaaataaattaagggaccaaagcatgtattaagcc 937219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 15445477 - 15445431
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  15445477 aaatgaaatccaaaaataagttaagggaccaaagcatgtattaagcc 15445431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 3217687 - 3217736
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaagccttaatt 65  Q
    |||||| | |||||||||||||||||||||| ||||||||||||||||||    
T  3217687 tgaaattcaaaaataagttaagggatcaaagaatgtattaagccttaatt 3217736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 44690930 - 44690978
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatc-aaagcatgtattaagcct 60  Q
    |||||||||||||||||||||||||||| | ||||||||||||||||||    
T  44690930 aaatgaaatccgaaaataagttaagggaccaaaagcatgtattaagcct 44690978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 53401521 - 53401573
Alignment:
Q  8 gactgaaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||| |||| |||||| |||||||||||||||| |||||||||||||||||||    
T  53401521 gactaaaataaaatccaaaaataagttaagggaccaaagcatgtattaagcct 53401573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 56000316 - 56000280
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||||||||||||||||||||||||||||||||||    
T  56000316 aaaataagttaagggatcaaagcatgtattaagcctt 56000280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 2310857 - 2310900
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaa 56  Q
    ||||||||| |||||||||||||||||| |||||||||||||||    
T  2310857 aaatgaaattcgaaaataagttaagggaccaaagcatgtattaa 2310900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 36644940 - 36644987
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | |||||||||| |||||||||||||||||||||||||    
T  36644940 aaatgaaattcaaaaataagttgagggatcaaagcatgtattaagcct 36644987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 23203037 - 23203090
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagccttaatta 66  Q
    ||||||||| | |||||||||||||||| ||||||||||||||| ||| |||||    
T  23203037 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaaacctaaatta 23203090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 19048942 - 19048898
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||||||| ||||||| |||||||| |||||||||||||||||||    
T  19048942 tgaaatccaaaaataaattaagggaccaaagcatgtattaagcct 19048898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 23202281 - 23202233
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | ||||||| |||||||| ||||||||||||||||||||    
T  23202281 aaatgaaattcaaaaataaattaagggaccaaagcatgtattaagcctt 23202233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 28189372 - 28189420
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | |||||||||| ||||| ||||||||||||||||||||    
T  28189372 aaatgaaattcaaaaataagttgagggaccaaagcatgtattaagcctt 28189420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 28370719 - 28370759
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaa 56  Q
    |||||||| |||||||||||||||| |||||||||||||||    
T  28370719 tgaaatccaaaaataagttaagggaccaaagcatgtattaa 28370759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 526794 - 526837
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaa 56  Q
    ||||||||||||||||||| |||||||| |||| ||||||||||    
T  526794 aaatgaaatccgaaaataaattaagggaccaaaacatgtattaa 526837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 3528226 - 3528191
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||||||||||||||| |||||||||||||||||||    
T  3528226 aaaataagttaagggaccaaagcatgtattaagcct 3528191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 23202877 - 23202830
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | |||||||||| ||||| |||||||||||||||||||    
T  23202877 aaatgaaattcaaaaataagttgagggaccaaagcatgtattaagcct 23202830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 26202461 - 26202508
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | |||||||||||||||| |||| ||||||||||||||    
T  26202461 aaatgaaattcaaaaataagttaagggaccaaaacatgtattaagcct 26202508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 26428694 - 26428651
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||||| | |||||||||||||||| ||||||||||||||||||    
T  26428694 tgaaattcaaaaataagttaagggaccaaagcatgtattaagcc 26428651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 28509948 - 28509995
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | |||||||||| ||||| |||||||||||||||||||    
T  28509948 aaatgaaattcaaaaataagttgagggaccaaagcatgtattaagcct 28509995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 31711133 - 31711086
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||||| |||||||||||||||| ||||  |||||||||||||    
T  31711133 aaatgaaatccaaaaataagttaagggaccaaatgatgtattaagcct 31711086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 36645509 - 36645544
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||||||||| |||||||||||||||||||||||||    
T  36645509 aaaataagttgagggatcaaagcatgtattaagcct 36645544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 44664401 - 44664448
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||| |||||| |||||||||||||||| ||||| |||||||||||||    
T  44664401 aaataaaatccaaaaataagttaagggaccaaaggatgtattaagcct 44664448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 53400226 - 53400179
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||||  |||||||||||||||  |||||||||||||||||||    
T  53400226 aaatgaaatctaaaaataagttaaggggccaaagcatgtattaagcct 53400179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 56297754 - 56297801
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | |||||||||||||||| | |||||||||||||||||    
T  56297754 aaatgaaattcaaaaataagttaagggacccaagcatgtattaagcct 56297801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 11113788 - 11113730
Alignment:
Q  8 gactgaaatgaaatccgaaaataagttaagggatcaaagcatgtattaagccttaatta 66  Q
    |||| |||||||| |||||||||||||||| || ||||  ||||||||||||| |||||    
T  11113788 gactaaaatgaaaaccgaaaataagttaagtgaccaaatgatgtattaagcctaaatta 11113730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 15317743 - 15317697
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||| | |||||||||||||||| |||||||||| |||||||    
T  15317743 aaatgaaattcaaaaataagttaagggaccaaagcatgtgttaagcc 15317697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 30671035 - 30670989
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||||||||||||||||||| || |||| ||| |||||||||    
T  30671035 aaatgaaatccgaaaataagttaagagaccaaaacatatattaagcc 30670989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 59
Target Start/End: Complemental strand, 44655750 - 44655716
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||||||||||||||| ||||||||||||||||||    
T  44655750 aaaataagttaagggaccaaagcatgtattaagcc 44655716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 56001355 - 56001389
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||||||||||||||| ||||||||||||||||||    
T  56001355 aaaataagttaagggaccaaagcatgtattaagcc 56001389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 8516930 - 8516975
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||| | |||||||||||||||| ||||| ||||||||||||||    
T  8516930 tgaaattcaaaaataagttaagggaccaaagtatgtattaagcctt 8516975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 15317914 - 15317951
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagcctta 62  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  15317914 aaaataagttgagggaccaaagcatgtattaagcctta 15317951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 19049947 - 19049999
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagccttaatta 66  Q
    ||||||||||| |||||||||||||||| |||| ||| |||||||||| |||||    
T  19049947 aaatgaaatccaaaaataagttaagggaccaaa-catatattaagcctaaatta 19049999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 31712566 - 31712611
Alignment:
Q  15 atgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| |||||||||||| ||||||||  |||||||||||||    
T  31712566 atgaaatccaaaaataagttaaaggatcaaatgatgtattaagcct 31712611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 26791494 - 26791546
Alignment:
Q  8 gactgaaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||| |||| |||||| ||||||||||||| || |||| ||||||||||||||    
T  26791494 gactaaaataaaatccaaaaataagttaagagaccaaaacatgtattaagcct 26791546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 39135588 - 39135628
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaa 56  Q
    |||||||| ||||||| |||||||| |||||||||||||||    
T  39135588 tgaaatccaaaaataaattaagggaccaaagcatgtattaa 39135628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 53177096 - 53177140
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||||| | |||||||||||||||| |||| ||||||||||||||    
T  53177096 tgaaattcaaaaataagttaagggaccaaaacatgtattaagcct 53177140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 60
Target Start/End: Original strand, 54374038 - 54374074
Alignment:
Q  24 gaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||||||||||||||||  |||||||||||||    
T  54374038 gaaaataagttaagggatcaaatgatgtattaagcct 54374074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 1796 - 1747
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctta 62  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  1796 aaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcctta 1747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 9e-17; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 4568049 - 4568097
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4568049 aaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcctt 4568097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 15510338 - 15510386
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15510338 aaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcctt 15510386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 20991724 - 20991771
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  20991724 aaatgaaatccgaaaataagttaagggatcaaaacatgtattaagcct 20991771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 12937957 - 12938005
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||    
T  12937957 aaatgaaattcaaaaataagttaagggatcaaagcatgtattaagcctt 12938005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 12952108 - 12952156
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||||    
T  12952108 aaatgaaattcaaaaataagttaagggatcaaagcatgtattaagcctt 12952156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 15613546 - 15613502
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaag 57  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  15613546 aaatgaaatccaaaaataagttaagggatcaaagcatgtattaag 15613502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 5061069 - 5061022
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||    
T  5061069 aaatgaaatccaaaaataagttaagggaccaaagcatgtattaagcct 5061022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 21306632 - 21306585
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  21306632 aaatgaaattcaaaaataagttaagggatcaaagcatgtattaagcct 21306585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 21314470 - 21314423
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||    
T  21314470 aaatgaaattcaaaaataagttaagggatcaaagcatgtattaagcct 21314423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 20988731 - 20988685
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||||    
T  20988731 aaatgaaattcgaaaataagttaagggaccaaagcatgtattaagcc 20988685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 21389216 - 21389264
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||||| || |||||||||||||||| ||||||||||||||||||||    
T  21389216 aaatgaaaaccaaaaataagttaagggaccaaagcatgtattaagcctt 21389264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 2472371 - 2472324
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | |||||||||||||||| |||||||||||||||||||    
T  2472371 aaatgaaattcaaaaataagttaagggagcaaagcatgtattaagcct 2472324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 4566992 - 4566949
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaa 56  Q
    |||||||||||||||||| ||||||||| |||||||||||||||    
T  4566992 aaatgaaatccgaaaatatgttaagggaccaaagcatgtattaa 4566949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 15509236 - 15509193
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaa 56  Q
    |||| ||||||||||||||||||||||| |||||||||||||||    
T  15509236 aaataaaatccgaaaataagttaagggaccaaagcatgtattaa 15509193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 28236963 - 28237014
Alignment:
Q  8 gactgaaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||| ||||||||| | |||||||||||||||| ||||||||||||||||||    
T  28236963 gactaaaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcc 28237014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 38471330 - 38471279
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagccttaat 64  Q
    ||||||||| | |||||||||||| |||||||||||||||||| ||||||||    
T  38471330 aaatgaaattcaaaaataagttaaaggatcaaagcatgtattatgccttaat 38471279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 5062261 - 5062307
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||    
T  5062261 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcc 5062307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 7345465 - 7345511
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||| | ||||||||||||||||||||| |||||||||||||    
T  7345465 aaatgaaattcaaaaataagttaagggatcaaaacatgtattaagcc 7345511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 63
Target Start/End: Complemental strand, 15153906 - 15153868
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagccttaa 63  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  15153906 aaaataagttaagggaccaaagcatgtattaagccttaa 15153868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 6914756 - 6914707
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctta 62  Q
    ||||||||| | |||||||||||||||| ||||||||||| |||||||||    
T  6914756 aaatgaaattcaaaaataagttaagggaccaaagcatgtactaagcctta 6914707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 12951982 - 12951949
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagc 58  Q
    ||||||||||||||||||||||||||||||||||    
T  12951982 aaaataagttaagggatcaaagcatgtattaagc 12951949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 32412002 - 32411957
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||||| |||||||||||||||| |||| |||||||||||||||    
T  32412002 tgaaatccaaaaataagttaagggaccaaaacatgtattaagcctt 32411957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 2472505 - 2472549
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaag 57  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||    
T  2472505 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaag 2472549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 16802364 - 16802408
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaag 57  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||    
T  16802364 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaag 16802408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 1982741 - 1982706
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||||||||||||||| |||||||||||||||||||    
T  1982741 aaaataagttaagggaccaaagcatgtattaagcct 1982706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 3076861 - 3076818
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||||| | |||||||||||||||| ||||||||||||||||||    
T  3076861 tgaaattcaaaaataagttaagggaccaaagcatgtattaagcc 3076818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 6914887 - 6914934
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | |||||||||||||||| |||| ||||||||||||||    
T  6914887 aaatgaaattcaaaaataagttaagggaccaaatcatgtattaagcct 6914934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 19050787 - 19050744
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||||||| |||||||||||||||| |||| |||||||||||||    
T  19050787 tgaaatccaaaaataagttaagggaccaaaacatgtattaagcc 19050744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 21387678 - 21387631
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | |||||||||||||||| |||||| ||||||||||||    
T  21387678 aaatgaaattcaaaaataagttaagggaccaaagcttgtattaagcct 21387631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 56
Target Start/End: Original strand, 26912425 - 26912456
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaa 56  Q
    ||||||||||||||||||||||||||||||||    
T  26912425 aaaataagttaagggatcaaagcatgtattaa 26912456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 32521997 - 32522040
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaa 56  Q
    ||||||||||||||||||| ||||| || |||||||||||||||    
T  32521997 aaatgaaatccgaaaataaattaagagaccaaagcatgtattaa 32522040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 32780157 - 32780204
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | |||||||||||||||| |||| ||||||||||||||    
T  32780157 aaatgaaattcaaaaataagttaagggaccaaaacatgtattaagcct 32780204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 37371098 - 37371055
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaa 56  Q
    ||||||||| | |||||||||||||||| |||||||||||||||    
T  37371098 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaa 37371055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 37380374 - 37380421
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | |||||||||| ||||| |||||||||||||||||||    
T  37380374 aaatgaaattcaaaaataagttgagggaccaaagcatgtattaagcct 37380421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 16802242 - 16802196
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||| | |||||||||||||||| | ||||||||||||||||    
T  16802242 aaatgaaattcaaaaataagttaagggacccaagcatgtattaagcc 16802196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 60
Target Start/End: Original strand, 32415265 - 32415307
Alignment:
Q  18 aaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||||| |||||||||||||||| ||||| |||||||||||||    
T  32415265 aaatccaaaaataagttaagggaccaaagtatgtattaagcct 32415307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 58
Target Start/End: Complemental strand, 12937818 - 12937785
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagc 58  Q
    |||||||||||||||| |||||||||||||||||    
T  12937818 aaaataagttaagggaccaaagcatgtattaagc 12937785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 19051017 - 19051062
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||| | |||||||||||||||| ||||||||||||||| ||||    
T  19051017 tgaaattcaaaaataagttaagggaccaaagcatgtattaaacctt 19051062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 57
Target Start/End: Original strand, 1982925 - 1982957
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaag 57  Q
    |||||||||||||||| ||||||||||||||||    
T  1982925 aaaataagttaagggaccaaagcatgtattaag 1982957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 15154145 - 15154185
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaa 56  Q
    |||||| | |||||||||||| |||||||||||||||||||    
T  15154145 tgaaattcaaaaataagttaaaggatcaaagcatgtattaa 15154185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 41905216 - 41905168
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||||| || |||||||||||||||| ||||  ||||||||||||||    
T  41905216 aaatgaaaaccaaaaataagttaagggaccaaatgatgtattaagcctt 41905168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 42979489 - 42979441
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||||| |||||||  ||||||||||||  ||||||||||||||    
T  42979489 aaatgaaatccaaaaataaactaagggatcaaattatgtattaagcctt 42979441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 45; Significance: 9e-17; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 32973180 - 32973132
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  32973180 aaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcctt 32973132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 53047938 - 53047890
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  53047938 aaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcctt 53047890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 34901693 - 34901646
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  34901693 aaatgaaatccaaaaataagttaagggatcaaagcatgtattaagcct 34901646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 52292635 - 52292588
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||    
T  52292635 aaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcct 52292588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 52705383 - 52705430
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||    
T  52705383 aaatgaaatccgaaaataagttgagggatcaaagcatgtattaagcct 52705430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 19579369 - 19579415
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  19579369 aaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcc 19579415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 32974298 - 32974344
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  32974298 aaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcc 32974344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 48035399 - 48035445
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  48035399 aaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcc 48035445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 39288514 - 39288563
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctta 62  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||    
T  39288514 aaatgaaatccgaaaataagttaagtgaccaaagcatgtattaagcctta 39288563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 53347073 - 53347118
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagc 58  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  53347073 aaatgaaatccgaaaataagttaagggaccaaagcatgtattaagc 53347118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 19579261 - 19579213
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||    
T  19579261 aaatgaaatctgaaaataagttaagggaccaaagcatgtattaagcctt 19579213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 53342757 - 53342709
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||    
T  53342757 aaatgaaatccgaaaataagttaaggaaccaaagcatgtattaagcctt 53342709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 47855413 - 47855460
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||    
T  47855413 aaatgaaatccaaaaataagttaagggaccaaagcatgtattaagcct 47855460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 52293598 - 52293641
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaa 56  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  52293598 aaatgaaatccgaaaataagttaagggaccaaagcatgtattaa 52293641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 64
Target Start/End: Complemental strand, 55442635 - 55442584
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagccttaat 64  Q
    |||||||||  ||||||||||||||||||||||||||||||||| |||||||    
T  55442635 aaatgaaatttgaaaataagttaagggatcaaagcatgtattaacccttaat 55442584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 7583511 - 7583465
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||    
T  7583511 aaatgaaatccgaaaataagttaatggaccaaagcatgtattaagcc 7583465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 11220733 - 11220786
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagccttaatta 66  Q
    ||||||||| | |||||||||||||||| |||||||||||||||||||| ||||    
T  11220733 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcctttatta 11220786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 12105400 - 12105347
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagccttaatta 66  Q
    ||||||||| | |||||||||||||||| |||||||||||||||||||| ||||    
T  12105400 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcctttatta 12105347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 13041988 - 13041935
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagccttaatta 66  Q
    ||||||||| | |||||||||||||||| |||||||||||||||||||| ||||    
T  13041988 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcctttatta 13041935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 13050065 - 13050012
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagccttaatta 66  Q
    ||||||||| | |||||||||||||||| |||||||||||||||||||| ||||    
T  13050065 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcctttatta 13050012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Complemental strand, 33563995 - 33563942
Alignment:
Q  8 gactgaaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||| ||||||||||| |||||||||||||||| |||| |||||||||||||||    
T  33563995 gactaaaatgaaatccaaaaataagttaagggaccaaaacatgtattaagcctt 33563942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 2225102 - 2225146
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||||||| |||||||||||||||| |||||||||||||||||||    
T  2225102 tgaaatccaaaaataagttaagggaccaaagcatgtattaagcct 2225146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 35633268 - 35633224
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaag 57  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||    
T  35633268 aaatgaaatccaaaaataagttaagggaccaaagcatgtattaag 35633224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 46987366 - 46987318
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||||    
T  46987366 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcctt 46987318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 53049112 - 53049160
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||| ||||||||||||||||||||||| |||| |||||||||||||||    
T  53049112 aaataaaatccgaaaataagttaagggaccaaaacatgtattaagcctt 53049160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 5416239 - 5416196
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaa 56  Q
    |||||||||||||||||||||||||||| ||||| |||||||||    
T  5416239 aaatgaaatccgaaaataagttaagggaccaaagtatgtattaa 5416196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 11483062 - 11483109
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||||||||| ||||||||||||||||| |||||||| ||||||||||    
T  11483062 aaatgaaatctgaaaataagttaagggaccaaagcatatattaagcct 11483109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 54109542 - 54109491
Alignment:
Q  8 gactgaaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||| ||||||||| | |||||||||||||||| ||||||||||||||||||    
T  54109542 gactaaaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcc 54109491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 55443625 - 55443672
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| |||||||||||||||||| ||||| |||||||||||||    
T  55443625 aaatgaaattcgaaaataagttaagggaccaaagtatgtattaagcct 55443672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 55
Target Start/End: Complemental strand, 381996 - 381954
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtatta 55  Q
    ||||||||||| |||||||||||||||| ||||||||||||||    
T  381996 aaatgaaatccaaaaataagttaagggaccaaagcatgtatta 381954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 7583751 - 7583705
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||    
T  7583751 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcc 7583705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 7820431 - 7820385
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||    
T  7820431 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcc 7820385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 23886901 - 23886947
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||    
T  23886901 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcc 23886947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 30431416 - 30431370
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||    
T  30431416 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcc 30431370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 46988544 - 46988590
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||    
T  46988544 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcc 46988590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 51214241 - 51214287
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||    
T  51214241 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcc 51214287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 5417123 - 5417172
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctta 62  Q
    |||||||||||||||||||||||||||| |||| || |||||||| ||||    
T  5417123 aaatgaaatccgaaaataagttaagggaccaaaacacgtattaagtctta 5417172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 12105560 - 12105605
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagc 58  Q
    ||||||||| | |||||||||||||||| |||||||||||||||||    
T  12105560 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagc 12105605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 46988385 - 46988340
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagc 58  Q
    ||||||||| | |||||||||||||||| |||||||||||||||||    
T  46988385 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagc 46988340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 65
Target Start/End: Original strand, 383059 - 383099
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagccttaatt 65  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  383059 aaaataagttaagggaccaaagcatgtattaagcctaaatt 383099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 19283775 - 19283727
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | |||||||||||||||| |||| |||||||||||||||    
T  19283775 aaatgaaattcaaaaataagttaagggaccaaaacatgtattaagcctt 19283727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 23886157 - 23886109
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | |||||||||||||||| ||||| ||||||||||||||    
T  23886157 aaatgaaattcaaaaataagttaagggaccaaagtatgtattaagcctt 23886109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 23886729 - 23886693
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||||||||||||| ||||||||||||||||||||    
T  23886729 aaaataagttaagggaccaaagcatgtattaagcctt 23886693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 48825853 - 48825805
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||| |||| |||||||||||||||||| |||| |||||||||||||||    
T  48825853 aaataaaattcgaaaataagttaagggaccaaaacatgtattaagcctt 48825805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 7822061 - 7822108
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||| |||||| ||| |||||||||||| |||||||||||||||||||    
T  7822061 aaataaaatccaaaattaagttaagggaccaaagcatgtattaagcct 7822108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 30431996 - 30431949
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | |||||||||| ||||| |||||||||||||||||||    
T  30431996 aaatgaaattcaaaaataagttgagggaccaaagcatgtattaagcct 30431949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Original strand, 48254974 - 48255009
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||||||||||||||| ||||||||||||||    
T  48254974 aaaataagttaagggatcaaatcatgtattaagcct 48255009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 51213492 - 51213445
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | ||||||||||||| || |||||||||||||||||||    
T  51213492 aaatgaaattcaaaaataagttaagagaccaaagcatgtattaagcct 51213445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 10987728 - 10987774
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||||||| || |||||||||||||||||||||  ||||||||||||    
T  10987728 aaatgaaaaccaaaaataagttaagggatcaaatgatgtattaagcc 10987774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 12106582 - 12106628
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||| | ||||||||||||| || ||||||||||||||||||    
T  12106582 aaatgaaattcaaaaataagttaagagaccaaagcatgtattaagcc 12106628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 29536755 - 29536709
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||||| ||||||||| |||||| |||| |||||||||||||    
T  29536755 aaatgaaatccaaaaataagtcaagggaccaaaacatgtattaagcc 29536709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 54654041 - 54654087
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||||| |||||||||||||||| ||||  ||||||||||||    
T  54654041 aaatgaaatccaaaaataagttaagggaccaaatgatgtattaagcc 54654087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 63
Target Start/End: Complemental strand, 7575407 - 7575374
Alignment:
Q  30 aagttaagggatcaaagcatgtattaagccttaa 63  Q
    ||||||||||| ||||||||||||||||||||||    
T  7575407 aagttaagggaccaaagcatgtattaagccttaa 7575374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 47854551 - 47854506
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagc 58  Q
    ||||||||||| ||||||| |||||||| |||||||| ||||||||    
T  47854551 aaatgaaatccaaaaataaattaagggaccaaagcatatattaagc 47854506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 54752645 - 54752604
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagccttaatta 66  Q
    |||||||||||||||| ||||  |||||||||||||||||||    
T  54752645 aaaataagttaagggaccaaatgatgtattaagccttaatta 54752604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 59
Target Start/End: Original strand, 5810203 - 5810247
Alignment:
Q  15 atgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||| | |||||||||||||||| |||| |||||||||||||    
T  5810203 atgaaattcaaaaataagttaagggaccaaatcatgtattaagcc 5810247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 13997299 - 13997251
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | |||||||||| | ||| ||||||||||||||||||||    
T  13997299 aaatgaaattcaaaaataagttgaaggaccaaagcatgtattaagcctt 13997251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 35835894 - 35835938
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaag 57  Q
    |||| ||||||||||| || |||||||| ||||||||||||||||    
T  35835894 aaataaaatccgaaaacaaattaagggaccaaagcatgtattaag 35835938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 35892611 - 35892655
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaag 57  Q
    |||| ||||||||||| || |||||||| ||||||||||||||||    
T  35892611 aaataaaatccgaaaacaaattaagggaccaaagcatgtattaag 35892655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 40502290 - 40502338
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||| |||||| |||||||||||||||| |||| |||||||||| ||||    
T  40502290 aaataaaatccaaaaataagttaagggaccaaaacatgtattaaacctt 40502338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 51213652 - 51213700
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | ||||||||||||||||  ||| |||||||||||||||    
T  51213652 aaatgaaattcaaaaataagttaagggactaaaacatgtattaagcctt 51213700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Complemental strand, 51400253 - 51400209
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||| || |||||||||||||||| |||| ||||||||||||||    
T  51400253 tgaaaaccaaaaataagttaagggaccaaaacatgtattaagcct 51400209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 9e-17; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 2236854 - 2236806
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||    
T  2236854 aaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcctt 2236806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 2238053 - 2238100
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||    
T  2238053 aaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcct 2238100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 56
Target Start/End: Original strand, 25889567 - 25889610
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaa 56  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  25889567 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaa 25889610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 48974481 - 48974528
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||    
T  48974481 aaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcct 48974528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 35683096 - 35683050
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  35683096 aaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcc 35683050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 1873940 - 1873981
Alignment:
Q  24 gaaaataagttaagggatcaaagcatgtattaagccttaatt 65  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  1873940 gaaaataagttaagggatcaaagcatgtattaagccttaatt 1873981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 20953329 - 20953282
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||    
T  20953329 aaatgaaatccaaaaataagttaagggaccaaagcatgtattaagcct 20953282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 29001197 - 29001244
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||    
T  29001197 aaatgaaatccaaaaataagttaagggaccaaagcatgtattaagcct 29001244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 34531704 - 34531661
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaa 56  Q
    |||||||||||||||||||||||||||| |||||||||||||||    
T  34531704 aaatgaaatccgaaaataagttaagggaccaaagcatgtattaa 34531661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 8 - 59
Target Start/End: Complemental strand, 48973244 - 48973193
Alignment:
Q  8 gactgaaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||| |||||||||||||||||||||||||| | ||||||||||||||||||    
T  48973244 gactaaaatgaaatccgaaaataagttaaggaaccaaagcatgtattaagcc 48973193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 27690704 - 27690750
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  27690704 aaatgaaatccaaaaataagttaagggaccaaagcatgtattaagcc 27690750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 30548537 - 30548491
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  30548537 aaatgaaatccaaaaataagttaagggaccaaagcatgtattaagcc 30548491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 48934282 - 48934236
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||    
T  48934282 aaatgaaatccgaaaataagttaagggattaaaacatgtattaagcc 48934236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 48935185 - 48935235
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagccttaa 63  Q
    ||||||||||||||||||||||||||||  ||||||| |||||||||||||    
T  48935185 aaatgaaatccgaaaataagttaagggacgaaagcatatattaagccttaa 48935235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 61
Target Start/End: Original strand, 1061522 - 1061575
Alignment:
Q  8 gactgaaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||| ||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  1061522 gactaaaatgaaatccaaaaataagttaagagagcaaagcatgtattaagcctt 1061575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 9123474 - 9123519
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagc 58  Q
    |||| ||||||||||||||||||||||| |||||||||||||||||    
T  9123474 aaataaaatccgaaaataagttaagggaccaaagcatgtattaagc 9123519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 34532777 - 34532830
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagccttaatta 66  Q
    |||| |||| |||||||||||||| ||| |||||||||||||||||||||||||    
T  34532777 aaataaaattcgaaaataagttaaaggaccaaagcatgtattaagccttaatta 34532830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 25866747 - 25866795
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||||    
T  25866747 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcctt 25866795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 35684277 - 35684325
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||| ||||||||||||||||||| ||| ||||||||||||||||||||    
T  35684277 aaataaaatccgaaaataagttaatggaccaaagcatgtattaagcctt 35684325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 51760080 - 51760033
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | |||||||||||||||| |||||||||||||||||||    
T  51760080 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcct 51760033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 25865995 - 25865949
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||| | ||||||||||||||||||||||||| |||||||||    
T  25865995 aaatgaaattcaaaaataagttaagggatcaaagcatatattaagcc 25865949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 33850343 - 33850297
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||| |||||| |||||||||||||||| ||||||||||||||||||    
T  33850343 aaataaaatccaaaaataagttaagggaccaaagcatgtattaagcc 33850297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 33943635 - 33943681
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||| |||||| |||||||||||||||| ||||||||||||||||||    
T  33943635 aaataaaatccaaaaataagttaagggaccaaagcatgtattaagcc 33943681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 51424292 - 51424246
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||||| |||||||||||||||| |||||| |||||||||||    
T  51424292 aaatgaaatccaaaaataagttaagggaccaaagcttgtattaagcc 51424246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 52371024 - 52370978
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||    
T  52371024 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcc 52370978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 25 - 62
Target Start/End: Original strand, 9575318 - 9575355
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagcctta 62  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  9575318 aaaataagttaagagatcaaagcatgtattaagcctta 9575355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 13641295 - 13641250
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||| || |||||||||||||||||||||||||||||||| ||||    
T  13641295 tgaaaaccaaaaataagttaagggatcaaagcatgtattaaacctt 13641250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 38458124 - 38458079
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||||| |||||||||||||||| ||||||||||||||| ||||    
T  38458124 tgaaatccaaaaataagttaagggaccaaagcatgtattaaacctt 38458079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 25866155 - 25866203
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | ||||||| |||||||| ||||||||||||||||||||    
T  25866155 aaatgaaattcaaaaataatttaagggaccaaagcatgtattaagcctt 25866203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 26056222 - 26056266
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaag 57  Q
    ||||||||||| |||||||||||||||| ||||| ||||||||||    
T  26056222 aaatgaaatccaaaaataagttaagggaccaaagtatgtattaag 26056266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 42244545 - 42244497
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||||| |||||||||||||||| |||| |||||||||| ||||    
T  42244545 aaatgaaatccaaaaataagttaagggaccaaaacatgtattaaacctt 42244497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 50678407 - 50678359
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | |||||||||||||||| |||| |||||||||||||||    
T  50678407 aaatgaaattcaaaaataagttaagggaccaaatcatgtattaagcctt 50678359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 52371184 - 52371232
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | |||||||||||||| | ||||||||||||||||||||    
T  52371184 aaatgaaattcaaaaataagttaaggaaccaaagcatgtattaagcctt 52371232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 52371859 - 52371907
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | |||||||||||||||| ||||||||||||||| ||||    
T  52371859 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaaacctt 52371907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 56
Target Start/End: Complemental strand, 1872978 - 1872935
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaa 56  Q
    ||||||||||||||||||| |||||||| |||| ||||||||||    
T  1872978 aaatgaaatccgaaaataaattaagggaccaaaacatgtattaa 1872935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 13642632 - 13642679
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||||||| || |||||||||||| ||| |||||||||||||||||||    
T  13642632 aaatgaaaaccaaaaataagttaaaggaccaaagcatgtattaagcct 13642679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 14312816 - 14312769
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||| |||||| |||||||||||||||| |||| ||||||||||||||    
T  14312816 aaataaaatccaaaaataagttaagggaccaaatcatgtattaagcct 14312769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 14390287 - 14390252
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||||||||||||||| |||||||||||||||||||    
T  14390287 aaaataagttaagggaccaaagcatgtattaagcct 14390252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 26054938 - 26054892
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||||| ||||||||||| |||| |||||||||||||||||||    
T  26054938 aaatgaaatccaaaaataagtta-gggaccaaagcatgtattaagcct 26054892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 28309791 - 28309756
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||||||||||||||| |||||||||||||||||||    
T  28309791 aaaataagttaagggaccaaagcatgtattaagcct 28309756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 31860533 - 31860580
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | |||||||||||||||| |||| ||||||||||||||    
T  31860533 aaatgaaattcaaaaataagttaagggaccaaaacatgtattaagcct 31860580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 60
Target Start/End: Complemental strand, 33941346 - 33941311
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||||||||||||||| |||||||||||||||||||    
T  33941346 aaaataagttaagggaccaaagcatgtattaagcct 33941311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 1061369 - 1061323
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||| ||||| |||||||||||||| || ||||||||||||||||||    
T  1061369 aaataaaatctgaaaataagttaagcgaccaaagcatgtattaagcc 1061323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 59
Target Start/End: Original strand, 1898091 - 1898125
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||||||||||||||| ||||||||||||||||||    
T  1898091 aaaataagttaagggaccaaagcatgtattaagcc 1898125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 13567207 - 13567157
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagccttaa 63  Q
    ||||||||||| |||||||||||| ||| |||| ||||||||| |||||||    
T  13567207 aaatgaaatccaaaaataagttaaaggaccaaaacatgtattatgccttaa 13567157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 20171249 - 20171287
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagccttaa 63  Q
    |||||||||||| ||| ||||||||||||||||||||||    
T  20171249 aaaataagttaaaggaccaaagcatgtattaagccttaa 20171287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 47511408 - 47511362
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||| | |||||||||||||||| |||||||| |||||||||    
T  47511408 aaatgaaattcaaaaataagttaagggaccaaagcatatattaagcc 47511362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 4388034 - 4387989
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagc 58  Q
    ||||||||| | ||||||||||||| || |||||||||||||||||    
T  4388034 aaatgaaattcaaaaataagttaagagaccaaagcatgtattaagc 4387989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 25035396 - 25035351
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||| | |||||||||||||||| ||||||||||||||| ||||    
T  25035396 tgaaattcaaaaataagttaagggaccaaagcatgtattaaacctt 25035351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 25040609 - 25040564
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||| | |||||||||||||||| ||||||||||||||| ||||    
T  25040609 tgaaattcaaaaataagttaagggaccaaagcatgtattaaacctt 25040564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 28999881 - 28999828
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagccttaatta 66  Q
    ||||||||| | |||||||||||||| | ||||| |||||||||||||| ||||    
T  28999881 aaatgaaattcaaaaataagttaaggaaccaaaggatgtattaagcctttatta 28999828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 27115527 - 27115575
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | ||||||||||||| || |||| |||||||||||||||    
T  27115527 aaatgaaattcaaaaataagttaagagaccaaaacatgtattaagcctt 27115575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 46280858 - 46280894
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  46280858 aaaataagttaaaggaccaaagcatgtattaagcctt 46280894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 47512159 - 47512207
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | ||||||||||||| || |||| |||||||||||||||    
T  47512159 aaatgaaattcaaaaataagttaagagaccaaaacatgtattaagcctt 47512207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 44; Significance: 3e-16; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 3254897 - 3254850
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||    
T  3254897 aaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcct 3254850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 3665265 - 3665218
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||    
T  3665265 aaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcct 3665218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 2305581 - 2305536
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagc 58  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  2305581 aaatgaaatccaaaaataagttaagggatcaaagcatgtattaagc 2305536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 21541102 - 21541050
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagccttaatt 65  Q
    ||||||||||| ||||| |||||||||| ||||||||||||||||||||||||    
T  21541102 aaatgaaatccaaaaattagttaagggaccaaagcatgtattaagccttaatt 21541050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 6706967 - 6706920
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||    
T  6706967 aaatgaaatccaaaaataagttaagggaccaaagcatgtattaagcct 6706920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 41312541 - 41312494
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||    
T  41312541 aaatgaaatccgaaaataagttaatggaccaaagcatgtattaagcct 41312494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 3255953 - 3255997
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagc 58  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  3255953 aaatgaaatccgaaaataagttaaggga-caaagcatgtattaagc 3255997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 11392031 - 11392080
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctta 62  Q
    ||||||||| | |||||||||||||||||||||| |||||||||||||||    
T  11392031 aaatgaaattcaaaaataagttaagggatcaaagtatgtattaagcctta 11392080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 11408692 - 11408741
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctta 62  Q
    ||||||||| | |||||||||||||||||||||| |||||||||||||||    
T  11408692 aaatgaaattcaaaaataagttaagggatcaaagtatgtattaagcctta 11408741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 5564100 - 5564052
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||||    
T  5564100 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcctt 5564052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 22653105 - 22653145
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaa 56  Q
    |||||||| ||||||||||||||||||||||||||||||||    
T  22653105 tgaaatccaaaaataagttaagggatcaaagcatgtattaa 22653145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 43015580 - 43015532
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||||    
T  43015580 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcctt 43015532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 5565220 - 5565267
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | |||||||||||||||| |||||||||||||||||||    
T  5565220 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcct 5565267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 11391913 - 11391866
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | ||||||| ||||||||||||||||||||||||||||    
T  11391913 aaatgaaattcaaaaataaattaagggatcaaagcatgtattaagcct 11391866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 11408574 - 11408527
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | ||||||| ||||||||||||||||||||||||||||    
T  11408574 aaatgaaattcaaaaataaattaagggatcaaagcatgtattaagcct 11408527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 14482166 - 14482213
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | |||||||||||||||| |||||||||||||||||||    
T  14482166 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcct 14482213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 17859341 - 17859388
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | |||||||||||||||| |||||||||||||||||||    
T  17859341 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcct 17859388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 2306736 - 2306781
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  2306736 aaatgaaatcc-aaaataagttaagggaccaaagcatgtattaagcc 2306781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 12852927 - 12852881
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  12852927 aaatgaaatccaaaagtaagttaagggaccaaagcatgtattaagcc 12852881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 12854179 - 12854225
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||||  |||||||||||||||| ||||||||||||||||||    
T  12854179 aaatgaaatctaaaaataagttaagggaccaaagcatgtattaagcc 12854225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 14573883 - 14573929
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||||| |||||| ||||||||| ||||||||||||||||||    
T  14573883 aaatgaaatccaaaaatatgttaagggaccaaagcatgtattaagcc 14573929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 21545144 - 21545190
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||||| |||||||||||||||| |||| |||||||||||||    
T  21545144 aaatgaaatccaaaaataagttaagggaccaaaacatgtattaagcc 21545190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 63
Target Start/End: Original strand, 27264648 - 27264698
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagccttaa 63  Q
    ||||||||| | ||||||||||||| || ||||||||||||||||||||||    
T  27264648 aaatgaaattcaaaaataagttaagagaccaaagcatgtattaagccttaa 27264698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 27262754 - 27262705
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctta 62  Q
    ||||||||| | |||||||||| ||||| |||||||||||||||||||||    
T  27262754 aaatgaaattcaaaaataagttgagggaccaaagcatgtattaagcctta 27262705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 43019321 - 43019366
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagc 58  Q
    ||||||||| | |||||||||||||| |||||||||||||||||||    
T  43019321 aaatgaaattcaaaaataagttaaggaatcaaagcatgtattaagc 43019366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 17179089 - 17179053
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||||||||||||| ||||||||||||||||||||    
T  17179089 aaaataagttaagggaccaaagcatgtattaagcctt 17179053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 33836810 - 33836762
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||||||||||||||||||||||| | |||| |||||||||| ||||    
T  33836810 aaatgaaatccgaaaataagttaaggaaccaaaacatgtattaaacctt 33836762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 7038407 - 7038454
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||||| |||||||||||||||| ||||  |||||||||||||    
T  7038407 aaatgaaatccaaaaataagttaagggaccaaatgatgtattaagcct 7038454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 59
Target Start/End: Original strand, 17179329 - 17179372
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||||| | |||||||||||||||| ||||||||||||||||||    
T  17179329 tgaaattcaaaaataagttaagggaccaaagcatgtattaagcc 17179372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 33837830 - 33837877
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||| ||||| ||||||||||||||||| |||| ||||||||||||||    
T  33837830 aaataaaatctgaaaataagttaagggaccaaaacatgtattaagcct 33837877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 41295146 - 41295099
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||||| ||||||||||||  || |||||||||||||||||||    
T  41295146 aaatgaaatccaaaaataagttaaatgaccaaagcatgtattaagcct 41295099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Complemental strand, 42246632 - 42246585
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||||||| || |||| ||||||||||| |||||||||||||||||||    
T  42246632 aaatgaaaaccaaaaacaagttaagggaccaaagcatgtattaagcct 42246585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 15268422 - 15268376
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||| |||||| ||||||||||||| || ||||||||||||||||||    
T  15268422 aaatcaaatccaaaaataagttaagagaccaaagcatgtattaagcc 15268376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 27657822 - 27657868
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||| |||||| ||||||| |||||||| ||||||||||||||||||    
T  27657822 aaataaaatccaaaaataaattaagggaccaaagcatgtattaagcc 27657868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 41313342 - 41313388
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||| |||| |||||||||||||||||| |||| |||||||||||||    
T  41313342 aaataaaattcgaaaataagttaagggaccaaaacatgtattaagcc 41313388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 15816741 - 15816790
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctta 62  Q
    ||||||||| | ||||||||||||| || |||| ||||||||||||||||    
T  15816741 aaatgaaattcaaaaataagttaagagaccaaaacatgtattaagcctta 15816790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 30202731 - 30202690
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaag 57  Q
    |||||| | |||||||||||||||| ||||||||||||||||    
T  30202731 tgaaattcaaaaataagttaagggaccaaagcatgtattaag 30202690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 61
Target Start/End: Original strand, 30202961 - 30203006
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||||| |||||||||||||||| |||| |||||||||| ||||    
T  30202961 tgaaatccaaaaataagttaagggaccaaaacatgtattaaacctt 30203006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 58
Target Start/End: Complemental strand, 42772479 - 42772434
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagc 58  Q
    ||||||||| | |||||||||||||| | |||||||||||||||||    
T  42772479 aaatgaaattcaaaaataagttaaggaaccaaagcatgtattaagc 42772434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 45
Target Start/End: Original strand, 3666343 - 3666375
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaa 45  Q
    |||||||||||||||||||||||||||| ||||    
T  3666343 aaatgaaatccgaaaataagttaagggaccaaa 3666375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 15269179 - 15269214
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||||||||||||| ||||||||||||||||||||    
T  15269179 aaaataagttaaggga-caaagcatgtattaagcctt 15269214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 65
Target Start/End: Complemental strand, 17858487 - 17858447
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagccttaatt 65  Q
    ||||||| |||||||| ||||||||||||||||||| ||||    
T  17858487 aaaataaattaagggaccaaagcatgtattaagcctaaatt 17858447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 17858659 - 17858707
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | |||||||||||||||| |||| ||||||||| |||||    
T  17858659 aaatgaaattcaaaaataagttaagggaccaaatcatgtattaggcctt 17858707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 22901039 - 22901075
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||| |||||||||||||| ||||||||||||||    
T  22901039 aaaataaattaagggatcaaagtatgtattaagcctt 22901075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 6844648 - 6844694
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||    
T  6844648 aaatgaaatccgaaaataagttaagggaccaaagcatgtattaagcc 6844694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 6843796 - 6843748
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||    
T  6843796 aaataaaatccgaaaataagttaagggatcaaagcatgtattaaacctt 6843748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 45385869 - 45385916
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||    
T  45385869 aaatgaaatccaaaaataagttaagggaccaaagcatgtattaagcct 45385916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 63
Target Start/End: Complemental strand, 40102262 - 40102212
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagccttaa 63  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||||||    
T  40102262 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagccttaa 40102212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 13 - 58
Target Start/End: Original strand, 24706287 - 24706332
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagc 58  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||    
T  24706287 aaatgaaatccaaaaataagttaagggaccaaagcatgtattaagc 24706332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 7565366 - 7565410
Alignment:
Q  18 aaatccgaaaataagttaagggatcaaagcatgtattaagcctta 62  Q
    |||||| |||||||||||||||| |||||||||||||||||||||    
T  7565366 aaatccaaaaataagttaagggaccaaagcatgtattaagcctta 7565410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 24068371 - 24068323
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||||| || |||||||||||||||| ||||||||||||||||||||    
T  24068371 aaatgaaaaccaaaaataagttaagggaccaaagcatgtattaagcctt 24068323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 7561837 - 7561794
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||||||| |||||||||||||||| ||||||||||||||||||    
T  7561837 tgaaatccaaaaataagttaagggaccaaagcatgtattaagcc 7561794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 3271201 - 3271155
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||    
T  3271201 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcc 3271155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 21551963 - 21551917
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||    
T  21551963 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcc 21551917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 13 - 59
Target Start/End: Complemental strand, 21553009 - 21552963
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||| | |||||||||||||||| ||||||||||||||||||    
T  21553009 aaatgaaattcaaaaataagttaagggaccaaagcatgtattaagcc 21552963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 45384286 - 45384237
Alignment:
Q  8 gactgaaatgaaatccgaaaataagttaagggatcaaagcatgtattaag 57  Q
    |||| ||||||||| | |||||||||||||||| ||||||||||||||||    
T  45384286 gactaaaatgaaattcaaaaataagttaagggaccaaagcatgtattaag 45384237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 3237710 - 3237762
Alignment:
Q  8 gactgaaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||| ||||||||||| |||||||||||||||| ||||  |||||||||||||    
T  3237710 gactaaaatgaaatccaaaaataagttaagggaccaaatgatgtattaagcct 3237762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 3271939 - 3271891
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | |||||||||||||||| |||| |||||||||||||||    
T  3271939 aaatgaaattcaaaaataagttaagggaccaaatcatgtattaagcctt 3271891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 13360394 - 13360350
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaag 57  Q
    ||||||||||  |||||||||||||||| ||||||||||||||||    
T  13360394 aaatgaaatctaaaaataagttaagggaccaaagcatgtattaag 13360350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 15989033 - 15988997
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||||||||||||| ||||||||||||||||||||    
T  15989033 aaaataagttaagggaccaaagcatgtattaagcctt 15988997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 24703250 - 24703202
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||||| |||||||||||||||| ||| |||| |||||||||||    
T  24703250 aaatgaaatccaaaaataagttaagggaccaatgcatttattaagcctt 24703202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 30864530 - 30864578
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | |||||||||||||||| |||| |||||||||||||||    
T  30864530 aaatgaaattcaaaaataagttaagggaccaaatcatgtattaagcctt 30864578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 40103008 - 40103060
Alignment:
Q  8 gactgaaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||| ||||||||| | |||||||||||||||| |||||||||||||| ||||    
T  40103008 gactaaaatgaaattcaaaaataagttaagggaccaaagcatgtattaggcct 40103060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 41178748 - 41178792
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    |||||| | |||||||||||||||| |||||||||||||||||||    
T  41178748 tgaaattcaaaaataagttaagggaccaaagcatgtattaagcct 41178792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 63
Target Start/End: Original strand, 3612670 - 3612708
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagccttaa 63  Q
    |||||||||||||||| ||||||||||||||| ||||||    
T  3612670 aaaataagttaagggaccaaagcatgtattaaaccttaa 3612708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 3237459 - 3237406
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatc-aaagcatgtattaagccttaatt 65  Q
    ||||||||||| |||||||||||||||| | ||| |||||||||| ||||||||    
T  3237459 aaatgaaatccaaaaataagttaagggaccaaaaacatgtattaaaccttaatt 3237406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 3272100 - 3272149
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctta 62  Q
    ||||||||| | |||||||||||||||| | || ||||||||||||||||    
T  3272100 aaatgaaattcaaaaataagttaagggacctaaacatgtattaagcctta 3272149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 11081118 - 11081155
Alignment:
Q  24 gaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||||||||||||||||  ||||||||||||||    
T  11081118 gaaaataagttaagggatcaaatgatgtattaagcctt 11081155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 41178509 - 41178468
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagccttaatta 66  Q
    |||||||||||||||| |||| ||| ||||||||||||||||    
T  41178509 aaaataagttaagggaccaaaacatatattaagccttaatta 41178468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 117089 - 117045
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaag 57  Q
    |||||||| || |||||||||||||||||||||  ||||||||||    
T  117089 aaatgaaaaccaaaaataagttaagggatcaaacgatgtattaag 117045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 3612246 - 3612294
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | |||||||||| |||||  |||||||||||||||||||    
T  3612246 aaatgaaattcaaaaataagttgagggactaaagcatgtattaagcctt 3612294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 30865200 - 30865248
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | |||||||||||| ||| |||||||| |||||||||||    
T  30865200 aaatgaaattcaaaaataagttaaaggaccaaagcatatattaagcctt 30865248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 35943948 - 35943896
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagccttaatt 65  Q
    |||||||| || |||||||||||||||| ||||  |||||||||||| |||||    
T  35943948 aaatgaaaaccaaaaataagttaagggaccaaacgatgtattaagccgtaatt 35943896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1827 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1827
Description:

Target: scaffold1827; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 1133 - 1179
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcc 59  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||||    
T  1133 aaataaaatccgaaaataagttaacggatcaaagcatgtattaagcc 1179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 5205 - 5160
Alignment:
Q  18 aaatccgaaaataagttaagggatcaaagcatgtattaagccttaa 63  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||    
T  5205 aaatccaaaaataagttaagggaccaaagcatgtattaagccttaa 5160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 2340 - 2388
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    |||||||| || |||||||||||||||| ||||||||||||||||||||    
T  2340 aaatgaaaaccaaaaataagttaagggaccaaagcatgtattaagcctt 2388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0178; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 59
Target Start/End: Complemental strand, 1241 - 1207
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagcc 59  Q
    ||||||||||||||||||||| |||||||||||||    
T  1241 aaaataagttaagggatcaaaacatgtattaagcc 1207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 25963 - 25919
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaag 57  Q
    ||||||||| |||||||||||||||||| ||||||||||||||||    
T  25963 aaatgaaattcgaaaataagttaagggaccaaagcatgtattaag 25919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 13 - 57
Target Start/End: Original strand, 26991 - 27036
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaa-gcatgtattaag 57  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||    
T  26991 aaatgaaatccgaaaataagttaacggatcaaaggcatgtattaag 27036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0839 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 66 - 18
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | |||||||||||||||| |||| |||||||||||||||    
T  66 aaatgaaattcaaaaataagttaagggaccaaatcatgtattaagcctt 18  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 98079 - 98039
Alignment:
Q  24 gaaaataagttaagggatcaaagcatgtattaagccttaat 64  Q
    ||||||||||||||||||||||  |||||||||||||||||    
T  98079 gaaaataagttaagggatcaaatgatgtattaagccttaat 98039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.000000005; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 13 - 60
Target Start/End: Original strand, 28333 - 28380
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||||||| | |||||||||| ||||| |||||||||||||||||||    
T  28333 aaatgaaattcaaaaataagttgagggaccaaagcatgtattaagcct 28380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 28173 - 28125
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||| | |||||||||| ||||| |||| |||||||||||||||    
T  28173 aaatgaaattcaaaaataagttgagggaccaaaacatgtattaagcctt 28125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0649 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0649
Description:

Target: scaffold0649; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 25 - 66
Target Start/End: Original strand, 3995 - 4036
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagccttaatta 66  Q
    |||||||||||||||| ||||| ||||||||||||| |||||    
T  3995 aaaataagttaagggaccaaagtatgtattaagcctaaatta 4036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 13 - 62
Target Start/End: Complemental strand, 1895 - 1847
Alignment:
Q  13 aaatgaaatccgaaaataagttaagggatcaaagcatgtattaagcctta 62  Q
    ||||||||| | |||||||||| ||||| |||||||||||||||||||||    
T  1895 aaatgaaattcaaaaataagttgaggga-caaagcatgtattaagcctta 1847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 25 - 61
Target Start/End: Original strand, 11858 - 11894
Alignment:
Q  25 aaaataagttaagggatcaaagcatgtattaagcctt 61  Q
    ||||||||||||| || ||||||||||||||||||||    
T  11858 aaaataagttaagagaccaaagcatgtattaagcctt 11894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 60
Target Start/End: Original strand, 96893 - 96937
Alignment:
Q  16 tgaaatccgaaaataagttaagggatcaaagcatgtattaagcct 60  Q
    ||||| || |||||||||||||||||||||  |||||||||||||    
T  96893 tgaaaaccaaaaataagttaagggatcaaatgatgtattaagcct 96937  T

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