View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14032_high_12 (Length: 227)
Name: NF14032_high_12
Description: NF14032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14032_high_12 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 32786292 - 32786066
Alignment:
| Q |
1 |
tagttcttttagtttaagccagtagaatatagataatctgttataatccagctaaacctttttatgtaacaaaacaagttttgctttcgtttttctttct |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32786292 |
tagttcttttagtttaagccagtagaatatagataatctgttataatccagctaaacctttttatgtaacaaaacaagttttgctttcgtttttctttct |
32786193 |
T |
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| Q |
101 |
agtttcagcatgaaaactctgagaacgtacatatgacactttccaactatatatgatatgatagtgaagaaatctgctaaagacctgtgacaactcggtt |
200 |
Q |
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|||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
32786192 |
agtttcggcatgaaaactctgagaacgtacatttgacactttccaactatatatgatatgatagtgaagaaatctgctaaagacttgtgacaactcggtt |
32786093 |
T |
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| Q |
201 |
cggcagtattgtatatttgtatatggt |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
32786092 |
cggcagtattgtatatttgtatatggt |
32786066 |
T |
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