View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14032_high_13 (Length: 203)
Name: NF14032_high_13
Description: NF14032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14032_high_13 |
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Alignment Details
Target: chr5 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 11 - 187
Target Start/End: Complemental strand, 13486081 - 13485905
Alignment:
| Q |
11 |
aagaatatatgttggtctttgtttgtatatgtggcatgcatgatgttcctttatgatacatatgattgcatgtatttggttagtggaggaaactatcgag |
110 |
Q |
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| T |
13486081 |
aagaaaatatgttggtctttgtttgtatatgtggcatgcatgatgttcctttatgatacatatgattgcatgtatttggttagtggaggaaactatcgag |
13485982 |
T |
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| Q |
111 |
tgattaaagtatggtgggggccaaagttttcggcgtagtataaggaatgatgaagaagtatggagtatagtttttgt |
187 |
Q |
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| T |
13485981 |
tgattaaagtatggtgggggccaaagttttcggcgtagtataaggaatgatgaagaagtatggagtatagtttttgt |
13485905 |
T |
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