View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14032_high_4 (Length: 416)
Name: NF14032_high_4
Description: NF14032
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14032_high_4 |
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Alignment Details
Target: chr2 (Bit Score: 391; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 10 - 400
Target Start/End: Original strand, 32906259 - 32906649
Alignment:
| Q |
10 |
aatattcaccagactgaaaatacagttccactaacaaaaccatcatagtgctatgtacttatagccttagcaaagggaaattgctttgcttgattggttg |
109 |
Q |
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| T |
32906259 |
aatattcaccagactgaaaatacagttccactaacaaaaccatcatagtgctatgtacttatagccttagcaaagggaaattgctttgcttgattggttg |
32906358 |
T |
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| Q |
110 |
caaaaatttatcataatgatagtgatgatgaaattggacagtatgtcctttatttaaggtacattaaggttgaaattggatatatgtgatatgtgcatga |
209 |
Q |
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| T |
32906359 |
caaaaatttatcataatgatagtgatgatgaaattggacagtatgtcctttatttaaggtacattaaggttgaaattggatatatgtgatatgtgcatga |
32906458 |
T |
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| Q |
210 |
ttgaataagcaatgagtatagcaccaattttggtttgagttatatattgaacgttatgtatatggacaaagaattaaagagcagccagctgcgtgtgcat |
309 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32906459 |
ttgaataagcaatgagtatagcaccaattttggtttgagttatatattgaacgttatgtatatggacaaagaattaaagagcagccagctgcgtgtgcat |
32906558 |
T |
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| Q |
310 |
gaaaatagaataccacggggtgtacaatactttggactttttcataatttaatttaagatcttatggtcacactctttataatgattttgt |
400 |
Q |
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| T |
32906559 |
gaaaatagaataccacggggtgtacaatactttggactttttcataatttaatttaagatcttatggtcacactctttataatgattttgt |
32906649 |
T |
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