View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14034_high_24 (Length: 353)
Name: NF14034_high_24
Description: NF14034
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14034_high_24 |
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Alignment Details
Target: chr6 (Bit Score: 298; Significance: 1e-167; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 298; E-Value: 1e-167
Query Start/End: Original strand, 19 - 347
Target Start/End: Complemental strand, 32937032 - 32936703
Alignment:
| Q |
19 |
gatccaacctccatgaacacgtgaggcatgatactcctccaacatatgtctaatatgtctgcttatatgttgtatttatggtcacaacaagaggaccatt |
118 |
Q |
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| T |
32937032 |
gatccaacctccatgaacacgtgaggcatgatactcctccaacatatgtctaatatgtctgcttatatattgtatttatggtcacaacaagaggaccatt |
32936933 |
T |
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| Q |
119 |
tttgacaagattgacgacagtgtagtcttcatcaagtgattaataataaaatat-ttataacaaaacaaaaataatcctgctttcacactactgatgaga |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||| |
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| T |
32936932 |
tttgacaagattgacgacagtgtagtcttcatcaagtgattaataataaaatatcttgtaacaaaacaaaaataatactgctttcacactactgatgaga |
32936833 |
T |
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| Q |
218 |
cgccccttgattcttgattttaaaatgaagggttaaatgcatgtgtggtcccactatttgaacttaattgaaaatttagtctcctatttctaaaactcgc |
317 |
Q |
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|||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32936832 |
cgccccttgattcttgattttaaaatgaggggttaaatgcacgtgtggtcccactatttgaacttaattgaaaatttagtctcctatttctaaaactcgc |
32936733 |
T |
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| Q |
318 |
attttagtccctactatacatttcttctgt |
347 |
Q |
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||||||||| |||||||||||||||||||| |
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| T |
32936732 |
attttagtctctactatacatttcttctgt |
32936703 |
T |
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