View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14034_high_32 (Length: 322)
Name: NF14034_high_32
Description: NF14034
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14034_high_32 |
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Alignment Details
Target: chr1 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 69 - 232
Target Start/End: Original strand, 45716105 - 45716268
Alignment:
| Q |
69 |
tgcggtaactcgaccgagttgacacgttacaccaacccatttacagtgtgaagtagtattgtgccatgaagaaagaaagtgtgaattttgaagtgaccct |
168 |
Q |
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| T |
45716105 |
tgcggtaactcgaccgagttgacacgttacaccaacccatttacagtgtgaagtagtattgtgccatgaagaaagaaagtgtgaattttgaagtgaccct |
45716204 |
T |
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| Q |
169 |
ttgaaagaaaggagggaaagtttttctgggttttggtcgttaatggcgtaagaaaggtggaaaa |
232 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45716205 |
ttgaaagaaaggagggaaagtttttctgggttttggtcgttaatggcgtaagaaaggtggaaaa |
45716268 |
T |
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