View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14034_high_4 (Length: 561)
Name: NF14034_high_4
Description: NF14034
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14034_high_4 |
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Alignment Details
Target: chr6 (Bit Score: 497; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 497; E-Value: 0
Query Start/End: Original strand, 10 - 543
Target Start/End: Complemental strand, 33787098 - 33786565
Alignment:
| Q |
10 |
atgaaacacagaatcatgaactattcattgattttctctgctttgtcggttgcttctattacactcaatctctttcaacactacaattttgcttatatgg |
109 |
Q |
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| T |
33787098 |
atgaaacacagaatcatgaactattcattgattttcactgctttgtcggttgcttctattactctcaatctctttcaacactacaattttgcttatatgg |
33786999 |
T |
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| Q |
110 |
gagcaaagttaacgaaaaggataaggttgtgtatgttggaaaagatattaacctttgaaactgcttggtttgatgaggnnnnnnnctctagtggagcatt |
209 |
Q |
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| T |
33786998 |
gagcaaagttaacgaaaaggataaggctgtgtatgttggaaaagatattaacctttgaaactgcttggtttgatgaggaaaaaaactctagtggagcatt |
33786899 |
T |
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| Q |
210 |
atgttcaaggttgagtaacgaagcttcgatggtgaaatcgctcgttgctgatagagtttgtttacttgttcaaacagcttcagccgtcacaatcgcgatg |
309 |
Q |
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| T |
33786898 |
atgttcaaggttgagtaacgaagcttcgatggtgaaatcgctcgttgctgatagagtttgtttacttgttcaaacagcttcagccgtcacaatcgcgatg |
33786799 |
T |
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| Q |
310 |
atcataggtcttgttgtagcttggaagctagcacttgttatgatagcagttcaaccgcttacaatactttgtttctatacgcgaaaagttttgctttcta |
409 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33786798 |
atcataggtcttgttgtagcttggaagctagcacttgttatgatagcagttcaaccgcttacaatactttgtttctatacgcgaaaagttttgctttcta |
33786699 |
T |
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| Q |
410 |
cactttcaactaaattcgttaaggcgcagaatcaaagcacacagattgctgtcgaggcggtttataatcacagaattgtaacttcttttggaagcatcac |
509 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33786698 |
cactttcaactaaattcgttaaggcgcagaatcaaagcacacagattgctgtcgaggcggtttataatcacagaattgtaacttcttttggaagcatcac |
33786599 |
T |
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| Q |
510 |
aaaagttttgagactgtttgacgaggcgcaagag |
543 |
Q |
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| T |
33786598 |
aaaagttttgagactgttcgacgaggcgcaagag |
33786565 |
T |
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