View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14034_high_52 (Length: 257)
Name: NF14034_high_52
Description: NF14034
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14034_high_52 |
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Alignment Details
Target: chr8 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 241
Target Start/End: Complemental strand, 5403243 - 5403003
Alignment:
| Q |
1 |
tgttttggaaatatattggttatattttggactgagaattatgaataattttttctatattactcagatcaagcaagaagtgatgataaatatgtctata |
100 |
Q |
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| T |
5403243 |
tgttttggaaatatattggttatattttggactgagaattatgaataattttttctatattactcagatcaagcaagaagtgatgataaatatgtctata |
5403144 |
T |
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| Q |
101 |
gatagaactaattgttgtgaaaagtatgagatccatattcttcttcaatttatagataaaaatgattacattgtattttatgtcaaatatgttttaaagc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
5403143 |
gatagaactaattgttgtgaaaagtatgagatccatattcttcttcaatttatagataaaaatgattacattgtattttatgtcaaatttgttttaaagc |
5403044 |
T |
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| Q |
201 |
aatttttgaaactataaacagtgcacgaaatttgatcctaa |
241 |
Q |
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||||||||||| |||||||||||||| |||||||||||||| |
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| T |
5403043 |
aatttttgaaattataaacagtgcaccaaatttgatcctaa |
5403003 |
T |
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