View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14034_low_37 (Length: 311)

Name: NF14034_low_37
Description: NF14034
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14034_low_37
NF14034_low_37
[»] chr8 (4 HSPs)
chr8 (20-299)||(15795974-15796260)
chr8 (20-304)||(40318525-40318815)
chr8 (22-244)||(2611861-2612090)
chr8 (93-139)||(40715986-40716032)
[»] chr3 (1 HSPs)
chr3 (23-299)||(34466743-34467026)
[»] chr4 (3 HSPs)
chr4 (20-299)||(41309724-41310010)
chr4 (20-276)||(34160959-34161222)
chr4 (19-137)||(2049026-2049146)
[»] chr1 (8 HSPs)
chr1 (20-299)||(13128961-13129247)
chr1 (23-296)||(3525730-3526008)
chr1 (20-297)||(27491658-27491942)
chr1 (20-299)||(34106416-34106706)
chr1 (20-270)||(52315938-52316182)
chr1 (22-270)||(41114342-41114597)
chr1 (22-270)||(43699226-43699482)
chr1 (24-176)||(11084543-11084695)
[»] chr2 (2 HSPs)
chr2 (22-270)||(21203136-21203391)
chr2 (45-110)||(45212799-45212864)
[»] chr6 (17 HSPs)
chr6 (20-247)||(8859076-8859295)
chr6 (34-148)||(5764500-5764614)
chr6 (34-148)||(5768035-5768149)
chr6 (34-148)||(5771570-5771684)
chr6 (34-148)||(5775105-5775219)
chr6 (34-148)||(5778640-5778754)
chr6 (34-148)||(5782175-5782289)
chr6 (34-148)||(5785710-5785824)
chr6 (34-148)||(5789245-5789359)
chr6 (34-148)||(5792780-5792894)
chr6 (34-148)||(5796315-5796429)
chr6 (34-148)||(5799850-5799964)
chr6 (34-148)||(5803385-5803499)
chr6 (34-148)||(5806920-5807034)
chr6 (34-148)||(5810455-5810569)
chr6 (34-148)||(5813990-5814104)
chr6 (34-148)||(5817525-5817639)
[»] chr7 (4 HSPs)
chr7 (34-270)||(37370269-37370512)
chr7 (22-143)||(34483856-34483977)
chr7 (22-137)||(49094457-49094573)
chr7 (45-148)||(38836170-38836273)


Alignment Details
Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 20 - 299
Target Start/End: Original strand, 15795974 - 15796260
Alignment:
Q  20 agggctgcacatgcccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttg 119  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15795974 agggctgcacatgcccctaaagaaatctaatcagatataacatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttg 15796073  T
Q  120 ggattgcttttgataacatcatgtttggatcttgtattcacagtatcagagccagtc-------gatctgtagaggttttgtgttttgatttggtgttag 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||| ||||||||||||||||| ||    
T  15796074 ggattgcttttgataacatcatgtttggatcttgtattcacagtatcagagccagtctcggtaagatctgtagaggtttagtgttttgatttggtgtcag 15796173  T
Q  213 aaagtgatttgagactcttgggctttctaggtctctctcacttgccctttttaacagtttctgtcgtttacgataagtatttgttca 299  Q
    ||||||||||| ||||||| |||||||||| |||| ||| ||| |||||||| || |||| |||  |||  ||||||||||||||||    
T  15796174 aaagtgatttgggactcttaggctttctagatctccctctcttaccctttttgacggtttttgtaatttgtgataagtatttgttca 15796260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 20 - 304
Target Start/End: Original strand, 40318525 - 40318815
Alignment:
Q  20 agggctgcacatgcccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttg 119  Q
    |||| ||||||||||  ||||||| || ||||||||||||||||| |||||||| ||||||||||| | |||||||||||||||||||||| ||||||||    
T  40318525 agggttgcacatgcct-taaagaattcaaatcagatatagcatctcttatgcaaaatagatgagtatcaaaatttcctaatcctctaatcaccatatttg 40318623  T
Q  120 ggattgcttttgataacatcatgtttggatcttgtattcacagtatcagagccagtc-------gatctgtagaggttttgtgttttgatttggtgttag 212  Q
    ||||| ||||||||||  |||||||||| ||||||||||||||||||||||| ||||       ||||| ||||||||||||||||||||||||||  ||    
T  40318624 ggattacttttgataatgtcatgtttggctcttgtattcacagtatcagagctagtctcagtaagatctatagaggttttgtgttttgatttggtgccag 40318723  T
Q  213 aaagtgatttgagactcttgggctttctaggtctctctcacttgccctttttaacagtttctgtcgtttacgataagtatttgttcatctca 304  Q
    ||||||  ||| ||||||||||||| ||||||||| ||| |||||||||||||||||||||||| ||||  |||||||||||||||| ||||    
T  40318724 aaagtgcgttgggactcttgggcttcctaggtctccctctcttgccctttttaacagtttctgtagtttgtgataagtatttgttcacctca 40318815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 22 - 244
Target Start/End: Original strand, 2611861 - 2612090
Alignment:
Q  22 ggctgcacatgcccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttggg 121  Q
    ||||||| ||| || ||||||| |||||||||||||||||||| | | |||| | |||||| || | |||||||||||||| ||||||| |||||||| |    
T  2611861 ggctgcatatgtccttaaagaattctaatcagatatagcatctgtaaagcaaaaaagatgaatatcaaaatttcctaatccgctaatcaccatatttgag 2611960  T
Q  122 attgcttttgataacatcatgtttggatcttgtattcacagtatcagagccagtc-------gatctgtagaggttttgtgttttgatttggtgttagaa 214  Q
    |||||||||||||||| ||||||||||||||||| |||||||||||||||| |||       ||||| ||||||||||||||||||||||||||  |||     
T  2611961 attgcttttgataacaccatgtttggatcttgtagtcacagtatcagagccggtctcaataagatctctagaggttttgtgttttgatttggtgccagat 2612060  T
Q  215 agtgatttgagactcttgggctttctaggt 244  Q
    |||| | |||||||||||||||||||||||    
T  2612061 agtgctatgagactcttgggctttctaggt 2612090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 93 - 139
Target Start/End: Complemental strand, 40716032 - 40715986
Alignment:
Q  93 ttcctaatcctctaatcatcatatttgggattgcttttgataacatc 139  Q
    ||||||||||||||||||  |||||| ||||||||||||||| ||||    
T  40716032 ttcctaatcctctaatcacaatatttaggattgcttttgatagcatc 40715986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 182; Significance: 2e-98; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 23 - 299
Target Start/End: Original strand, 34466743 - 34467026
Alignment:
Q  23 gctgcacatgcccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttggga 122  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||| | |||||||||||||||||||||| |||||||||||    
T  34466743 gctgcacatgcccctaaagaaatctaattagatatagcatctgttatgcaaaatagatgagtatcaaaatttcctaatcctctaatcaccatatttggga 34466842  T
Q  123 ttgcttttgataacatcatgtttggatcttgtattcacagtatcagagccagtc-------gatctgtagaggttttgtgttttgatttggtgttagaaa 215  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||| |||||       ||||||||||| ||||||||||||||||||||  |||||    
T  34466843 ttgcttttgataacatcatgtttggatcttgtattcacagtatgagagtcagtctcagtaagatctgtagagattttgtgttttgatttggtgccagaaa 34466942  T
Q  216 gtgatttgagactcttgggctttctaggtctctctcacttgccctttttaacagtttctgtcgtttacgataagtatttgttca 299  Q
    ||| |||| ||||||||||||||||||||||| ||| |||||||||||||||||||| ||| ||||  ||||||||||||||||    
T  34466943 gtgctttgggactcttgggctttctaggtctccctctcttgccctttttaacagtttttgtagtttgtgataagtatttgttca 34467026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 181; Significance: 8e-98; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 181; E-Value: 8e-98
Query Start/End: Original strand, 20 - 299
Target Start/End: Complemental strand, 41310010 - 41309724
Alignment:
Q  20 agggctgcacatgcccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttg 119  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| | |||||||||||||||||||||| ||||||||    
T  41310010 agggctgcacatgcccctaaagaattctaatcagatatagcatctgttatgcaaaatagatgagtatcaaaatttcctaatcctctaatcaccatatttg 41309911  T
Q  120 ggattgcttttgataacatcatgtttggatcttgtattcacagtatcagagccagtc-------gatctgtagaggttttgtgttttgatttggtgttag 212  Q
    |||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||| ||||||  ||    
T  41309910 ggattgattttgattacaccatgtttggatcttgtattcacagtatcagagccagtctcagtaagatctgtagaggttttgtgttttgagttggtgccag 41309811  T
Q  213 aaagtgatttgagactcttgggctttctaggtctctctcacttgccctttttaacagtttctgtcgtttacgataagtatttgttca 299  Q
    |||||| |||||||||||||||||||||||||||| ||| |||||| ||||||||||||||| | ||||  ||||||||||||||||    
T  41309810 aaagtgctttgagactcttgggctttctaggtctccctctcttgccttttttaacagtttctatagtttgtgataagtatttgttca 41309724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 20 - 276
Target Start/End: Original strand, 34160959 - 34161222
Alignment:
Q  20 agggctgcacatgcccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttg 119  Q
    |||| |||||||||||||||||||||||||||||||| ||||| | | | |||| ||||||||||| | |||||||||||||||||||||| |||||||     
T  34160959 agggttgcacatgcccctaaagaaatctaatcagataaagcatatgtaaagcaaaatagatgagtatcaaaatttcctaatcctctaatcaccatattta 34161058  T
Q  120 ggattgcttttgataacatcatgtttggatcttgtattcacagtatcagagccagtc-------gatctgtagaggttttgtgttttgatttggtgttag 212  Q
    |||||||||||||||||| |||||||||||||||||||||||| ||||||||||| |       ||||||||| ||||||||||||||||||||||  ||    
T  34161059 ggattgcttttgataacaccatgtttggatcttgtattcacagcatcagagccagactcaataggatctgtagcggttttgtgttttgatttggtgccag 34161158  T
Q  213 aaagtgatttgagactcttgggctttctaggtctctctcacttgccctttttaacagtttctgt 276  Q
    ||| || |||| ||||||||||||||||||||||| ||| |||||||||||||||||| |||||    
T  34161159 aaaatgctttgggactcttgggctttctaggtctccctctcttgccctttttaacagtgtctgt 34161222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 137
Target Start/End: Complemental strand, 2049146 - 2049026
Alignment:
Q  19 aagggctgcacatgcccctaaagaaat--ctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatat 116  Q
    ||||||| || || ||||||||||| |  ||||||||| ||||||  | |||||||| ||| ||||||| | ||  ||||||||||||||||||  ||||    
T  2049146 aagggctacatatacccctaaagaattttctaatcagacatagcagatgttatgcaaaatacatgagtatcaaaccttcctaatcctctaatcacaatat 2049047  T
Q  117 ttgggattgcttttgataaca 137  Q
    |||||||||||||||||||||    
T  2049046 ttgggattgcttttgataaca 2049026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 161; Significance: 7e-86; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 20 - 299
Target Start/End: Complemental strand, 13129247 - 13128961
Alignment:
Q  20 agggctgcacatgcccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttg 119  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||| ||| ||||||| | |||||||||||||||||||||| ||||||||    
T  13129247 agggctgcacatgcccctaaagaattctaatcagatatagcatctgttatgcaaaataaatgagtatcaaaatttcctaatcctctaatcaccatatttg 13129148  T
Q  120 ggattgcttttgataacatcatgtttggatcttgtattcacagtatcagagccagtc-------gatctgtagaggttttgtgttttgatttggtgttag 212  Q
    |||||| ||||||| ||| ||||||||||| ||||||||||||||| ||||||||||       ||||||||||||||||||||||||| ||||||  |     
T  13129147 ggattgattttgatgacaccatgtttggatattgtattcacagtattagagccagtctcaataagatctgtagaggttttgtgttttgagttggtgccaa 13129048  T
Q  213 aaagtgatttgagactcttgggctttctaggtctctctcacttgccctttttaacagtttctgtcgtttacgataagtatttgttca 299  Q
    |||| |||||||||||||||| |||| |||||||| ||| |||||| ||||||||||||||||| ||||  ||||||||||||||||    
T  13129047 aaagagatttgagactcttggactttttaggtctccctctcttgccttttttaacagtttctgtagtttgtgataagtatttgttca 13128961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 23 - 296
Target Start/End: Complemental strand, 3526008 - 3525730
Alignment:
Q  23 gctgcacatgcccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttggga 122  Q
    |||||||||||||||||||||||||||||| ||||||||| | |||||||| ||||||||||| | ||||||||| |||||||||||| ||||| | |||    
T  3526008 gctgcacatgcccctaaagaaatctaatcaaatatagcatatgttatgcaaaatagatgagtatcaaaatttcctgatcctctaatcaccatatctagga 3525909  T
Q  123 ttgcttttgataacatcatgtttggatcttgtattcacagtatcagagccagtc-------gatctgtagaggttttgtgttttgatttggtgttagaaa 215  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||       ||||||||| |   |||||||||||||||||||||||||    
T  3525908 ttgcttttgataacaccatgtttggatcttgtattcacagtatcagagccaatctcagtaagatctgtagcg--attgtgttttgatttggtgttagaaa 3525811  T
Q  216 gtgatttgagactcttgggctttctaggtctctctcacttgccctttttaacagtttctgtcgtttacgataagtatttgt 296  Q
    ||| ||||  |||||||||||||||||||||| ||| |||| ||||||||||||| ||||| ||||  |||||| ||||||    
T  3525810 gtgctttggaactcttgggctttctaggtctccctctcttgacctttttaacagtgtctgtagtttgtgataagaatttgt 3525730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 20 - 297
Target Start/End: Complemental strand, 27491942 - 27491658
Alignment:
Q  20 agggctgcacatgcccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttg 119  Q
    ||||||||||||| |  ||||||| |||||||||||||||||||| |||||||| ||||||||||| | |||||| ||||||||||||||| ||||||||    
T  27491942 agggctgcacatgtctttaaagaagtctaatcagatatagcatctgttatgcaaaatagatgagtatcaaaattttctaatcctctaatcaccatatttg 27491843  T
Q  120 ggattgcttttgataacatcatgtttggatcttgtattcacagtatcagagccagtc-------gatctgtagaggttttgtgttttgatttggtgttag 212  Q
    || ||||||||||||||| || ||||||||||||||||||||||||||||| |||||       ||||||||||| ||||||||||||||||||||  ||    
T  27491842 gggttgcttttgataacaccaagtttggatcttgtattcacagtatcagagtcagtcttagtaagatctgtagagattttgtgttttgatttggtgccag 27491743  T
Q  213 aaagtgatttgagactcttgggctttctaggtctctctcacttgccctttttaacagtttctgtcgtttacgataagtatttgtt 297  Q
    |||| |  ||| ||||||||||||| ||||||||| ||| ||||||||||||||| |||||||| ||||  |||||| |||||||    
T  27491742 aaagagcgttgggactcttgggcttcctaggtctccctctcttgccctttttaaccgtttctgtagtttgtgataagcatttgtt 27491658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 20 - 299
Target Start/End: Original strand, 34106416 - 34106706
Alignment:
Q  20 agggctgcacatgcccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttg 119  Q
    |||| ||||||||||| ||||||| |||||||||||||| ||||| |||||||| |||||||||||   ||| ||| |||||||||||||  ||||||||    
T  34106416 agggttgcacatgcccttaaagaattctaatcagatataacatctgttatgcaaaatagatgagtataaaaaattcataatcctctaatccccatatttg 34106515  T
Q  120 ggattgcttttgataacatcatgtttggatcttgtattcacagtatcagagccagtc-------gatctgtagaggttttgtgttttgatttggtgttag 212  Q
    |||||| ||||||| ||| ||||||||||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||| ||||||  ||    
T  34106516 ggattgattttgatgacaccatgtttggatcttgtattcacagtatcagagccagtctcaataagatctttagaggttttgtgttttgagttggtgccag 34106615  T
Q  213 aaagtgatttgagactcttgggctttctagg----tctctctcacttgccctttttaacagtttctgtcgtttacgataagtatttgttca 299  Q
    |||||| |||| |||||||||||||||||||    |||||||| || ||||||||||||||||| ||| ||||  || ||||| |||||||    
T  34106616 aaagtgctttgggactcttgggctttctaggtctctctctctctctcgccctttttaacagtttatgtagtttgtgaaaagtagttgttca 34106706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 20 - 270
Target Start/End: Complemental strand, 52316182 - 52315938
Alignment:
Q  20 agggctgcacatgcccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttg 119  Q
    |||||||||||||||||||||||||| |||||||||| ||||| | ||||||| ||             |||||||||||||||||||||| ||||| |     
T  52316182 agggctgcacatgcccctaaagaaatataatcagataaagcatttgttatgcatca-------------aaatttcctaatcctctaatcaccatatcta 52316096  T
Q  120 ggattgcttttgataacatcatgtttggatcttgtattcacagtatcagagccagtc-------gatctgtagaggttttgtgttttgatttggtgttag 212  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||       ||||||||| ||||||||||||||||||||||  ||    
T  52316095 ggattgcttttgataacaccatgtttggatcttgtattcacagtatcagagccagtctcaataagatctgtagcggttttgtgttttgatttggtgccag 52315996  T
Q  213 aaagtgatttgagactcttgggctttctaggtctctctcacttgccctttttaacagt 270  Q
    |||||| |||| ||||||||||||||||||||||| ||| ||||||||||||||||||    
T  52315995 aaagtgctttgggactcttgggctttctaggtctccctctcttgccctttttaacagt 52315938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 22 - 270
Target Start/End: Complemental strand, 41114597 - 41114342
Alignment:
Q  22 ggctgcacatgcccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttggg 121  Q
    ||||||||||| |||||||||| |||||||||||||||||||| | |  ||| | || ||| || | |||||||||||||||||||||| ||||||||||    
T  41114597 ggctgcacatgtccctaaagaattctaatcagatatagcatctgtaaaacaaaaaagttgaatatcaaaatttcctaatcctctaatcaccatatttggg 41114498  T
Q  122 attgcttttgataacatcatgtttggatcttgtattcacagtatcagagccagtc-------gatctgtagaggttttgtgttttgatttggtgttagaa 214  Q
    ||| |||||||||||| ||| ||||||||||||||||||||||||||||||  ||       |||||| ||||||||||||||||||||||||   |||     
T  41114497 attacttttgataacaccatatttggatcttgtattcacagtatcagagccgatctcagaaagatctgcagaggttttgtgttttgatttggtaccagat 41114398  T
Q  215 agtgatttgagactcttgggctttctaggtctctctcacttgccctttttaacagt 270  Q
    |||| | || ||||||||||||||||||||||| ||| ||||||||||||| ||||    
T  41114397 agtgctatgggactcttgggctttctaggtctccctctcttgccctttttagcagt 41114342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 22 - 270
Target Start/End: Complemental strand, 43699482 - 43699226
Alignment:
Q  22 ggctgcacatgcccctaaagaaatctaatcagatatagcatctattatgcaacata-gatgagtaacgaaatttcctaatcctctaatcatcatatttgg 120  Q
    ||||||||||| |||||||||| |||||| ||||||||||||| | |  ||| | | ||||| || | |||||||||||||||||||||| |||||||||    
T  43699482 ggctgcacatgtccctaaagaattctaataagatatagcatctgtaaaacaaaaaaagatgaatatcaaaatttcctaatcctctaatcaccatatttgg 43699383  T
Q  121 gattgcttttgataacatcatgtttggatcttgtattcacagtatcagagccagtc-------gatctgtagaggttttgtgttttgatttggtgttaga 213  Q
    |||||||||| |||||| |||||||| |||||||| |||||||||||||||| |||       ||||||||||||||||||||||||||||||||  |||    
T  43699382 gattgcttttaataacaccatgtttgaatcttgtactcacagtatcagagccggtctcaataagatctgtagaggttttgtgttttgatttggtgcgaga 43699283  T
Q  214 aagtgatttgagactcttgggctttctaggtctctctcacttgccctttttaacagt 270  Q
     |||| | || ||||||||||||||||||||||| ||| ||||| ||||||| ||||    
T  43699282 tagtgttatgggactcttgggctttctaggtctcactctcttgctctttttagcagt 43699226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 24 - 176
Target Start/End: Complemental strand, 11084695 - 11084543
Alignment:
Q  24 ctgcacatgcccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttgggat 123  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| | |||||||||||||||| ||||| ||||||| ||||    
T  11084695 ctgcacatgcccctaaagaattctaatcagatatagcatctgttatgcaaaatagatgagtatcaaaatttcctaatcctccaatcaccatatttaggat 11084596  T
Q  124 tgcttttgataacatcatgtttggatcttgtattcacagtatcagagccagtc 176  Q
    || ||||||| ||| |||||||||||||| ||||||||||||||||| |||||    
T  11084595 tgattttgatgacaccatgtttggatcttatattcacagtatcagaggcagtc 11084543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 138; Significance: 4e-72; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 22 - 270
Target Start/End: Complemental strand, 21203391 - 21203136
Alignment:
Q  22 ggctgcacatgcccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttggg 121  Q
    ||||||||||| |||||||||| |||||||| ||||||||| | | | |||| | |||||| || | |||||||||||||||||||||||||||||||||    
T  21203391 ggctgcacatgtccctaaagaattctaatcatatatagcatgtgtgaagcaaaaaagatgaatatcaaaatttcctaatcctctaatcatcatatttggg 21203292  T
Q  122 attgcttttgataacatcatgtttggatcttgtattcacagtatcagagccagtc-------gatctgtagaggttttgtgttttgatttggtgttagaa 214  Q
    |||||||||||||||| ||||||||||||| ||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||  |||     
T  21203291 attgcttttgataacaccatgtttggatctagtattcacagtatcagagccaatctcagtaagatctgtagaggttttgtgttttgatttggtgccagat 21203192  T
Q  215 agtgatttgagactcttgggctttctaggtctctctcacttgccctttttaacagt 270  Q
    |||| | |||||||||||||||||||||||||| ||| ||||||||||||| ||||    
T  21203191 agtgctatgagactcttgggctttctaggtctccctctcttgccctttttagcagt 21203136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 45 - 110
Target Start/End: Complemental strand, 45212864 - 45212799
Alignment:
Q  45 tctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatca 110  Q
    |||||||||  ||||||||| |||||||| ||| ||||||| | ||  ||||||||||||||||||    
T  45212864 tctaatcaggcatagcatctgttatgcaaaatatatgagtatcaaaccttcctaatcctctaatca 45212799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 115; Significance: 2e-58; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 20 - 247
Target Start/End: Complemental strand, 8859295 - 8859076
Alignment:
Q  20 agggctgcacatgcccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttg 119  Q
    |||||||||||||||||||| |||||||||| ||||||||||||| |||||||| ||| || |||| | ||||||||||||||||||||||  |||| |     
T  8859295 agggctgcacatgcccctaatgaaatctaataagatatagcatctgttatgcaaaataaataagtatcaaaatttcctaatcctctaatcacaatatcta 8859196  T
Q  120 ggattgcttttgataacatcatgtttggatcttgtattcacagtatcagagccagtcgatctgtagaggttttgtgttttgatttggtgttagaaagtga 219  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||         ||||||||| |||||| |||||||||||||||  ||||| ||     
T  8859195 ggattgcttttgataacaccatgtttggatcttgtattcacagtatca--------agatctgtagcggttttttgttttgatttggtgccagaaaatgc 8859104  T
Q  220 tttgagactcttgggctttctaggtctc 247  Q
    |||| |||||||||||||||||||||||    
T  8859103 tttgggactcttgggctttctaggtctc 8859076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 5764500 - 5764614
Alignment:
Q  34 ccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttgggattgcttttgat 133  Q
    |||||||||| |||||||||| ||||||  | |||||||| ||| || |||| | ||  |||||||||||||||| |  ||||||| ||||| |||| ||    
T  5764500 ccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttcctaatcctctaattacaatatttgagattgttttttat 5764599  T
Q  134 aacatcatgtttgga 148  Q
    |||| ||| ||||||    
T  5764600 aacaccatttttgga 5764614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 5768035 - 5768149
Alignment:
Q  34 ccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttgggattgcttttgat 133  Q
    |||||||||| |||||||||| ||||||  | |||||||| ||| || |||| | ||  |||||||||||||||| |  ||||||| ||||| |||| ||    
T  5768035 ccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttcctaatcctctaattacaatatttgagattgttttttat 5768134  T
Q  134 aacatcatgtttgga 148  Q
    |||| ||| ||||||    
T  5768135 aacaccatttttgga 5768149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 5771570 - 5771684
Alignment:
Q  34 ccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttgggattgcttttgat 133  Q
    |||||||||| |||||||||| ||||||  | |||||||| ||| || |||| | ||  |||||||||||||||| |  ||||||| ||||| |||| ||    
T  5771570 ccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttcctaatcctctaattacaatatttgagattgttttttat 5771669  T
Q  134 aacatcatgtttgga 148  Q
    |||| ||| ||||||    
T  5771670 aacaccatttttgga 5771684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 5775105 - 5775219
Alignment:
Q  34 ccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttgggattgcttttgat 133  Q
    |||||||||| |||||||||| ||||||  | |||||||| ||| || |||| | ||  |||||||||||||||| |  ||||||| ||||| |||| ||    
T  5775105 ccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttcctaatcctctaattacaatatttgagattgttttttat 5775204  T
Q  134 aacatcatgtttgga 148  Q
    |||| ||| ||||||    
T  5775205 aacaccatttttgga 5775219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 5778640 - 5778754
Alignment:
Q  34 ccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttgggattgcttttgat 133  Q
    |||||||||| |||||||||| ||||||  | |||||||| ||| || |||| | ||  |||||||||||||||| |  ||||||| ||||| |||| ||    
T  5778640 ccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttcctaatcctctaattacaatatttgagattgttttttat 5778739  T
Q  134 aacatcatgtttgga 148  Q
    |||| ||| ||||||    
T  5778740 aacaccatttttgga 5778754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 5782175 - 5782289
Alignment:
Q  34 ccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttgggattgcttttgat 133  Q
    |||||||||| |||||||||| ||||||  | |||||||| ||| || |||| | ||  |||||||||||||||| |  ||||||| ||||| |||| ||    
T  5782175 ccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttcctaatcctctaattacaatatttgagattgttttttat 5782274  T
Q  134 aacatcatgtttgga 148  Q
    |||| ||| ||||||    
T  5782275 aacaccatttttgga 5782289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 5785710 - 5785824
Alignment:
Q  34 ccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttgggattgcttttgat 133  Q
    |||||||||| |||||||||| ||||||  | |||||||| ||| || |||| | ||  |||||||||||||||| |  ||||||| ||||| |||| ||    
T  5785710 ccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttcctaatcctctaattacaatatttgagattgttttttat 5785809  T
Q  134 aacatcatgtttgga 148  Q
    |||| ||| ||||||    
T  5785810 aacaccatttttgga 5785824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 5789245 - 5789359
Alignment:
Q  34 ccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttgggattgcttttgat 133  Q
    |||||||||| |||||||||| ||||||  | |||||||| ||| || |||| | ||  |||||||||||||||| |  ||||||| ||||| |||| ||    
T  5789245 ccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttcctaatcctctaattacaatatttgagattgttttttat 5789344  T
Q  134 aacatcatgtttgga 148  Q
    |||| ||| ||||||    
T  5789345 aacaccatttttgga 5789359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 5792780 - 5792894
Alignment:
Q  34 ccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttgggattgcttttgat 133  Q
    |||||||||| |||||||||| ||||||  | |||||||| ||| || |||| | ||  |||||||||||||||| |  ||||||| ||||| |||| ||    
T  5792780 ccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttcctaatcctctaattacaatatttgagattgttttttat 5792879  T
Q  134 aacatcatgtttgga 148  Q
    |||| ||| ||||||    
T  5792880 aacaccatttttgga 5792894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 5796315 - 5796429
Alignment:
Q  34 ccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttgggattgcttttgat 133  Q
    |||||||||| |||||||||| ||||||  | |||||||| ||| || |||| | ||  |||||||||||||||| |  ||||||| ||||| |||| ||    
T  5796315 ccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttcctaatcctctaattacaatatttgagattgttttttat 5796414  T
Q  134 aacatcatgtttgga 148  Q
    |||| ||| ||||||    
T  5796415 aacaccatttttgga 5796429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 5799850 - 5799964
Alignment:
Q  34 ccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttgggattgcttttgat 133  Q
    |||||||||| |||||||||| ||||||  | |||||||| ||| || |||| | ||  |||||||||||||||| |  ||||||| ||||| |||| ||    
T  5799850 ccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttcctaatcctctaattacaatatttgagattgttttttat 5799949  T
Q  134 aacatcatgtttgga 148  Q
    |||| ||| ||||||    
T  5799950 aacaccatttttgga 5799964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 5803385 - 5803499
Alignment:
Q  34 ccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttgggattgcttttgat 133  Q
    |||||||||| |||||||||| ||||||  | |||||||| ||| || |||| | ||  |||||||||||||||| |  ||||||| ||||| |||| ||    
T  5803385 ccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttcctaatcctctaattacaatatttgagattgttttttat 5803484  T
Q  134 aacatcatgtttgga 148  Q
    |||| ||| ||||||    
T  5803485 aacaccatttttgga 5803499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 5806920 - 5807034
Alignment:
Q  34 ccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttgggattgcttttgat 133  Q
    |||||||||| |||||||||| ||||||  | |||||||| ||| || |||| | ||  |||||||||||||||| |  ||||||| ||||| |||| ||    
T  5806920 ccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttcctaatcctctaattacaatatttgagattgttttttat 5807019  T
Q  134 aacatcatgtttgga 148  Q
    |||| ||| ||||||    
T  5807020 aacaccatttttgga 5807034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 5810455 - 5810569
Alignment:
Q  34 ccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttgggattgcttttgat 133  Q
    |||||||||| |||||||||| ||||||  | |||||||| ||| || |||| | ||  |||||||||||||||| |  ||||||| ||||| |||| ||    
T  5810455 ccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttcctaatcctctaattacaatatttgagattgttttttat 5810554  T
Q  134 aacatcatgtttgga 148  Q
    |||| ||| ||||||    
T  5810555 aacaccatttttgga 5810569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 5813990 - 5814104
Alignment:
Q  34 ccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttgggattgcttttgat 133  Q
    |||||||||| |||||||||| ||||||  | |||||||| ||| || |||| | ||  |||||||||||||||| |  ||||||| ||||| |||| ||    
T  5813990 ccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttcctaatcctctaattacaatatttgagattgttttttat 5814089  T
Q  134 aacatcatgtttgga 148  Q
    |||| ||| ||||||    
T  5814090 aacaccatttttgga 5814104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 34 - 148
Target Start/End: Original strand, 5817525 - 5817639
Alignment:
Q  34 ccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttgggattgcttttgat 133  Q
    |||||||||| |||||||||| ||||||  | |||||||| ||| || |||| | ||  |||||||||||||||| |  ||||||| ||||| |||| ||    
T  5817525 ccctaaagaattctaatcagacatagcagatgttatgcaaaatacataagtatcaaaccttcctaatcctctaattacaatatttgagattgttttttat 5817624  T
Q  134 aacatcatgtttgga 148  Q
    |||| ||| ||||||    
T  5817625 aacaccatttttgga 5817639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 106; Significance: 5e-53; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 34 - 270
Target Start/End: Complemental strand, 37370512 - 37370269
Alignment:
Q  34 ccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttgggattgcttttgat 133  Q
    ||||| ||||||||||||||||||||||||| | | |||| | |||||| || | ||||||||||||||||||||||||||||||||||||| |||||||    
T  37370512 ccctacagaaatctaatcagatatagcatctgtaaagcaaaaaagatgaatatcaaaatttcctaatcctctaatcatcatatttgggattgtttttgat 37370413  T
Q  134 aacatcatgtttggatcttgtattcacagtatcagagccagtc-------gatctgtagaggttttgtgttttgatttggtgttagaaagtgatttgaga 226  Q
    |||| |||||||| |||||||||||| | |||||||| |||||       ||| ||||||||||||||||||| ||||||||| ||| | || | || |     
T  37370412 aacaccatgtttgaatcttgtattcatattatcagagtcagtctcaataagatttgtagaggttttgtgtttttatttggtgtcagatactgttatgggc 37370313  T
Q  227 ctcttgggctttctaggtctctctcacttgccctttttaacagt 270  Q
    ||||||| ||||||||||||| ||| ||||||||||||| ||||    
T  37370312 ctcttggcctttctaggtctccctctcttgccctttttagcagt 37370269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 22 - 143
Target Start/End: Complemental strand, 34483977 - 34483856
Alignment:
Q  22 ggctgcacatgcccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttggg 121  Q
    ||||||||||| | | ||| ||||||||||||||| ||||||||||||| || ||||||||||| | ||||||| || ||||||||||| ||||| | ||    
T  34483977 ggctgcacatgtctcaaaaaaaatctaatcagataaagcatctattatgtaaaatagatgagtatcaaaatttcatattcctctaatcaccatatctagg 34483878  T
Q  122 attgcttttgataacatcatgt 143  Q
    |||||||||||||||| |||||    
T  34483877 attgcttttgataacaccatgt 34483856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 22 - 137
Target Start/End: Original strand, 49094457 - 49094573
Alignment:
Q  22 ggctgcacatgcccctaaagaaatctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatca-tcatatttgg 120  Q
    |||||||| | ||||||||||| |||| || || |||||| ||||||||||| ||| ||||||| | ||  ||||||||||||||||||   ||||||||    
T  49094457 ggctgcacgtacccctaaagaattctactctgacatagcaactattatgcaaaatatatgagtaccaaaccttcctaatcctctaatcacaaatatttgg 49094556  T
Q  121 gattgcttttgataaca 137  Q
    |||||||||||||||||    
T  49094557 gattgcttttgataaca 49094573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 45 - 148
Target Start/End: Complemental strand, 38836273 - 38836170
Alignment:
Q  45 tctaatcagatatagcatctattatgcaacatagatgagtaacgaaatttcctaatcctctaatcatcatatttgggattgcttttgataacatcatgtt 144  Q
    |||||||||| ||| ||| | |||||||| ||| ||||||| | ||  ||||||||||||||||||  ||||||||||||||||||||||||| ||| ||    
T  38836273 tctaatcagacatatcatatgttatgcaaaatacatgagtatcaaatcttcctaatcctctaatcacaatatttgggattgcttttgataacaccatttt 38836174  T
Q  145 tgga 148  Q
    ||||    
T  38836173 tgga 38836170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University