View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14034_low_76 (Length: 227)
Name: NF14034_low_76
Description: NF14034
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14034_low_76 |
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Alignment Details
Target: chr7 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 221
Target Start/End: Original strand, 42903372 - 42903580
Alignment:
| Q |
13 |
aaccaacattaatcaaattactacatcaattataacaggtggcaaaccggcgttggccccatccgagagacctgtttaacctgtcattttagacgtgcca |
112 |
Q |
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| T |
42903372 |
aaccaacattaatcaaattactacatcaactataacatgtggcaaaccggtgttagccctatccaacagacctgtttaacctgtcattttagacgtgcca |
42903471 |
T |
|
| Q |
113 |
aactaagattttgaacctatccctctaattagtcgattnnnnnnngttggccctaatgacctaacattcctttatannnnnnncgaaataacatcaatca |
212 |
Q |
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|||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
42903472 |
aactaagattttgaacctatccctctaattagtccattcaaaaaagttggccctaatgacctaacattcctttatatttttttcgaaataacatcaatca |
42903571 |
T |
|
| Q |
213 |
aattactac |
221 |
Q |
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||||||||| |
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| T |
42903572 |
aattactac |
42903580 |
T |
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