View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14035_low_5 (Length: 519)

Name: NF14035_low_5
Description: NF14035
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14035_low_5
NF14035_low_5
[»] chr8 (18 HSPs)
chr8 (164-424)||(14628358-14628618)
chr8 (20-99)||(14628683-14628762)
chr8 (328-422)||(24114303-24114397)
chr8 (328-411)||(29382382-29382465)
chr8 (328-411)||(14528144-14528227)
chr8 (351-422)||(24110699-24110770)
chr8 (328-411)||(24269593-24269675)
chr8 (331-409)||(24904630-24904708)
chr8 (331-411)||(17976614-17976694)
chr8 (328-411)||(34497110-34497193)
chr8 (328-422)||(13315013-13315106)
chr8 (364-410)||(26008019-26008065)
chr8 (334-411)||(5850936-5851013)
chr8 (331-414)||(15238791-15238874)
chr8 (328-411)||(19786726-19786809)
chr8 (362-411)||(30235372-30235421)
chr8 (338-399)||(30783772-30783833)
chr8 (328-396)||(17101914-17101982)
[»] chr4 (20 HSPs)
chr4 (328-422)||(13128895-13128989)
chr4 (328-422)||(19562199-19562293)
chr4 (334-411)||(9052669-9052745)
chr4 (331-411)||(17671997-17672077)
chr4 (328-411)||(21323896-21323979)
chr4 (328-406)||(13908854-13908932)
chr4 (328-406)||(20315000-20315078)
chr4 (328-421)||(12578287-12578380)
chr4 (334-411)||(14648890-14648966)
chr4 (328-411)||(13692690-13692773)
chr4 (331-409)||(19929699-19929777)
chr4 (328-404)||(7582299-7582375)
chr4 (362-425)||(9737564-9737627)
chr4 (364-411)||(12318428-12318475)
chr4 (351-406)||(17709757-17709812)
chr4 (362-411)||(22357590-22357639)
chr4 (351-411)||(17951340-17951400)
chr4 (351-411)||(17955192-17955252)
chr4 (328-404)||(19374834-19374909)
chr4 (375-411)||(20829806-20829842)
[»] chr2 (13 HSPs)
chr2 (327-422)||(31804920-31805015)
chr2 (328-421)||(15339223-15339316)
chr2 (332-420)||(29719256-29719344)
chr2 (334-423)||(25888247-25888336)
chr2 (328-411)||(45553125-45553208)
chr2 (331-411)||(12953318-12953398)
chr2 (328-407)||(17743497-17743576)
chr2 (328-411)||(20174656-20174739)
chr2 (364-410)||(8503127-8503173)
chr2 (328-421)||(17349343-17349434)
chr2 (331-423)||(25618540-25618631)
chr2 (351-407)||(27909163-27909219)
chr2 (331-411)||(32085458-32085538)
[»] chr7 (37 HSPs)
chr7 (328-422)||(23099973-23100067)
chr7 (328-423)||(2350768-2350863)
chr7 (328-411)||(5530016-5530099)
chr7 (331-411)||(10587048-10587128)
chr7 (332-411)||(11221189-11221268)
chr7 (328-411)||(16297841-16297924)
chr7 (328-422)||(2563802-2563895)
chr7 (328-421)||(3329679-3329772)
chr7 (331-411)||(7318268-7318348)
chr7 (331-395)||(8313419-8313483)
chr7 (331-414)||(9500436-9500519)
chr7 (328-407)||(18369001-18369080)
chr7 (328-414)||(22339332-22339421)
chr7 (332-422)||(6042445-6042534)
chr7 (328-422)||(9731648-9731742)
chr7 (328-421)||(5108551-5108643)
chr7 (328-404)||(8979027-8979103)
chr7 (331-411)||(9574402-9574482)
chr7 (331-411)||(9864350-9864430)
chr7 (334-410)||(10937598-10937674)
chr7 (375-410)||(5047454-5047489)
chr7 (328-407)||(8054510-8054589)
chr7 (348-411)||(15869590-15869653)
chr7 (328-421)||(4785822-4785914)
chr7 (328-421)||(4818822-4818914)
chr7 (334-411)||(10584513-10584590)
chr7 (331-411)||(1584540-1584618)
chr7 (375-411)||(1814110-1814146)
chr7 (334-410)||(9916562-9916638)
chr7 (334-410)||(9924474-9924550)
chr7 (328-404)||(13759881-13759957)
chr7 (334-410)||(18449238-18449314)
chr7 (331-383)||(18467474-18467526)
chr7 (375-411)||(19153293-19153329)
chr7 (375-411)||(20752692-20752728)
chr7 (331-411)||(21230307-21230387)
chr7 (328-408)||(31492928-31493008)
[»] chr6 (19 HSPs)
chr6 (328-421)||(23143707-23143800)
chr6 (328-411)||(21907427-21907510)
chr6 (328-418)||(17729140-17729230)
chr6 (328-411)||(9726017-9726100)
chr6 (330-422)||(12183354-12183446)
chr6 (364-421)||(14079501-14079558)
chr6 (328-421)||(21672456-21672549)
chr6 (328-411)||(19244580-19244663)
chr6 (328-411)||(22567835-22567918)
chr6 (328-399)||(23645788-23645859)
chr6 (328-411)||(25927324-25927407)
chr6 (364-422)||(5624624-5624682)
chr6 (328-405)||(9516786-9516863)
chr6 (328-421)||(21679872-21679965)
chr6 (328-404)||(23844486-23844562)
chr6 (334-389)||(22410354-22410409)
chr6 (365-414)||(20002440-20002489)
chr6 (327-411)||(4339730-4339814)
chr6 (375-411)||(15466365-15466401)
[»] chr3 (17 HSPs)
chr3 (328-422)||(21301902-21301996)
chr3 (331-412)||(10744896-10744977)
chr3 (328-421)||(41508352-41508445)
chr3 (328-411)||(12805911-12805994)
chr3 (328-411)||(21325335-21325418)
chr3 (328-414)||(3116440-3116525)
chr3 (328-423)||(5508319-5508413)
chr3 (328-405)||(22349410-22349487)
chr3 (331-411)||(10917913-10917993)
chr3 (332-408)||(12411149-12411225)
chr3 (328-407)||(4650231-4650309)
chr3 (332-411)||(8319035-8319113)
chr3 (328-411)||(31286037-31286118)
chr3 (364-422)||(16245786-16245844)
chr3 (328-406)||(19908307-19908385)
chr3 (328-421)||(2167638-2167730)
chr3 (334-410)||(28728940-28729016)
[»] scaffold0622 (1 HSPs)
scaffold0622 (328-411)||(723-806)
[»] chr1 (20 HSPs)
chr1 (328-407)||(14779564-14779643)
chr1 (328-421)||(17359147-17359240)
chr1 (328-421)||(21449074-21449167)
chr1 (328-407)||(15543987-15544066)
chr1 (328-407)||(25405651-25405730)
chr1 (353-411)||(27117764-27117822)
chr1 (331-411)||(9787903-9787983)
chr1 (328-407)||(12208600-12208679)
chr1 (328-411)||(21847629-21847711)
chr1 (328-411)||(26648992-26649074)
chr1 (328-405)||(17610277-17610354)
chr1 (351-411)||(16359866-16359925)
chr1 (331-411)||(23038036-23038115)
chr1 (328-411)||(3591674-3591757)
chr1 (332-407)||(18736265-18736340)
chr1 (364-414)||(22664198-22664248)
chr1 (328-421)||(13345357-13345450)
chr1 (375-412)||(32383066-32383103)
chr1 (331-411)||(24267806-24267886)
chr1 (364-412)||(24281271-24281319)
[»] scaffold0035 (1 HSPs)
scaffold0035 (328-408)||(69911-69991)
[»] scaffold0008 (1 HSPs)
scaffold0008 (335-411)||(54855-54931)
[»] chr5 (14 HSPs)
chr5 (330-422)||(25402360-25402452)
chr5 (328-407)||(15375903-15375982)
chr5 (328-420)||(25550525-25550617)
chr5 (331-411)||(24852196-24852276)
chr5 (328-407)||(24140442-24140520)
chr5 (375-414)||(24267022-24267061)
chr5 (375-414)||(24343653-24343692)
chr5 (327-411)||(15690773-15690856)
chr5 (328-405)||(17431884-17431961)
chr5 (353-410)||(23380303-23380360)
chr5 (375-411)||(15469931-15469967)
chr5 (331-411)||(17171577-17171657)
chr5 (334-410)||(17185459-17185535)
chr5 (375-407)||(20744879-20744911)
[»] scaffold0005 (1 HSPs)
scaffold0005 (334-411)||(168326-168402)
[»] scaffold0650 (1 HSPs)
scaffold0650 (328-411)||(6282-6365)
[»] scaffold0016 (1 HSPs)
scaffold0016 (353-410)||(12105-12162)
[»] scaffold0638 (1 HSPs)
scaffold0638 (328-388)||(844-904)
[»] scaffold0136 (1 HSPs)
scaffold0136 (375-411)||(15533-15569)
[»] scaffold0001 (1 HSPs)
scaffold0001 (331-411)||(81482-81561)


Alignment Details
Target: chr8 (Bit Score: 221; Significance: 1e-121; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 164 - 424
Target Start/End: Complemental strand, 14628618 - 14628358
Alignment:
Q  164 atatcaatttgatttaacttgtttacattatcaatgtaagaatactttataaatgcatcaaatgattgtttgacacatcaatattatgtgtttaaaatca 263  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14628618 atatcaatttgatttaacttgtttacattatcaatgtaagaatactttataaatgcatcaaatgattgtttgacacatcaatattatgtgtttaaaatca 14628519  T
Q  264 ttaaatcatttgatatcacattattgaatgaatgtatgaatnnnnnnnntttacactgatagtgttggacgaaacgacaatctctgcggatacaatattt 363  Q
    ||||||||||||||| |||||||||||||||||||||||||        ||||||| |||||||||| ||||||||||||| ||||||||||||||||||    
T  14628518 ttaaatcatttgatagcacattattgaatgaatgtatgaataaaaaaaatttacaccgatagtgttgaacgaaacgacaatatctgcggatacaatattt 14628419  T
Q  364 tacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatcaaac 424  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14628418 tacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatcaaac 14628358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 20 - 99
Target Start/End: Complemental strand, 14628762 - 14628683
Alignment:
Q  20 ccaaataccattgatacaagcaatgtatagcgtttagacatgagcatgaaaagagttactctcccatccatgtatggttg 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14628762 ccaaataccattgatacaagcaatgtatagcgtttagacatgagcatgaaaagagttactctcccatccatgtatggttg 14628683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 24114303 - 24114397
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatcaa 422  Q
    |||||||||||||||||| |||||||||| ||| | |||||||||| |||||||||||||||  |||||||| ||||||||||| ||||||||||    
T  24114303 ttggacgaaacgacaatccctgcggatacgatactctacttatcattttattacttggtaaacaatttggtacacttgcctaatccgcacatcaa 24114397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 328 - 411
Target Start/End: Original strand, 29382382 - 29382465
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||| |||||||||||| ||| |||||| ||| | |||||||||  ||||||||||||||| ||||||||| |||||||||||    
T  29382382 ttggatgaaacgacaatccctgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgcctaat 29382465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 411
Target Start/End: Complemental strand, 14528227 - 14528144
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||||||||||||||||| || |||||| ||| | ||| |||||  ||||||||||||||| ||||||| | |||||||||||    
T  14528227 ttggacgaaacgacaatctatgtggatacgatactctacgtatcactttattacttggtaaacgatttggcacacttgcctaat 14528144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 351 - 422
Target Start/End: Original strand, 24110699 - 24110770
Alignment:
Q  351 ggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatcaa 422  Q
    |||||| ||| | |||||||||| |||||||||||||||||||||| || |||||| |||| ||||||||||    
T  24110699 ggatacgatactctacttatcattttattacttggtaaatgatttgatacacttgcataatccgcacatcaa 24110770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 411
Target Start/End: Complemental strand, 24269675 - 24269593
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||||||||||||| ||| |||||| ||| | |||||| ||  |||||||||||||||| |||||||| |||||||||||    
T  24269675 ttggacgaaacgacaatccctgtggatacgatactctactta-cactttattacttggtaaataatttggtacacttgcctaat 24269593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 331 - 409
Target Start/End: Complemental strand, 24904708 - 24904630
Alignment:
Q  331 gacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgccta 409  Q
    ||||||||||||||| ||| |||||  ||| | |||||||||  |||||| |||||||||||||||||| |||||||||    
T  24904708 gacgaaacgacaatcactgtggatatgatactctacttatcactttattatttggtaaatgatttggtacacttgccta 24904630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 411
Target Start/End: Complemental strand, 17976694 - 17976614
Alignment:
Q  331 gacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||||| ||||| || |||||| ||| | |||||||||  |||||||||| |||||||||||| | |||||||||||    
T  17976694 gacgaaacgaaaatctttgtggatacgatactctacttatcactttattacttgataaatgatttggcacacttgcctaat 17976614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 328 - 411
Target Start/End: Complemental strand, 34497193 - 34497110
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||||||||||||| |||||  |||||| ||| | |||| ||||  ||||||||||||||| |||||| || |||||||||||    
T  34497193 ttggacgaaacgacagtctctatggatacgatactctactaatcactttattacttggtaaacgatttgatagacttgcctaat 34497110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 13315013 - 13315106
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatcaa 422  Q
    ||||||||||| | ||||  || |||||| ||| | |||||||||  ||||||||||||||||||| ||||| |||| |||||| ||||||||||    
T  13315013 ttggacgaaacaaaaatccatgtggatacgatactatacttatcactttattacttggtaaatgatctggtacactt-cctaatccgcacatcaa 13315106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 410
Target Start/End: Complemental strand, 26008065 - 26008019
Alignment:
Q  364 tacttatcatattattacttggtaaatgatttggtaaacttgcctaa 410  Q
    |||||||||  ||||||||||||||||||||||||| ||||||||||    
T  26008065 tacttatcactttattacttggtaaatgatttggtacacttgcctaa 26008019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 334 - 411
Target Start/End: Complemental strand, 5851013 - 5850936
Alignment:
Q  334 gaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||||||||||| || |||||| ||| | |||||||||  ||||||||||||||| |||| |||| ||||| |||||    
T  5851013 gaaacgacaatctatgtggatacgatactctacttatcactttattacttggtaaacgattaggtacacttgactaat 5850936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 414
Target Start/End: Complemental strand, 15238874 - 15238791
Alignment:
Q  331 gacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcg 414  Q
    ||||||||||||||   || |||||| ||| | |||||||||| || ||||||||||||  ||||| || ||||||||||||||    
T  15238874 gacgaaacgacaattcatgtggatacgataatctacttatcattttcttacttggtaaacaatttgatacacttgcctaattcg 15238791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 411
Target Start/End: Complemental strand, 19786809 - 19786726
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||||||||||||| || ||  |||||  ||| ||||||| |||  ||||||||||||||| ||||||||| ||||| |||||    
T  19786809 ttggacgaaacgacagtccctatggatatgatactttacttgtcactttattacttggtaaacgatttggtatacttgtctaat 19786726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 411
Target Start/End: Complemental strand, 30235421 - 30235372
Alignment:
Q  362 tttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||||||  ||||||||||||||| ||||| ||| |||||||||||    
T  30235421 tttacttatcactttattacttggtaaacgattttgtacacttgcctaat 30235372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 399
Target Start/End: Original strand, 30783772 - 30783833
Alignment:
Q  338 cgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggta 399  Q
    ||||||||| || |||||| ||| | |||||||||  ||||||||||||||| |||||||||    
T  30783772 cgacaatctatgtggatacgatactctacttatcactttattacttggtaaacgatttggta 30783833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 396
Target Start/End: Original strand, 17101914 - 17101982
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttg 396  Q
    ||||| |||||||||||| ||  |||||| ||| | |||||||||  ||||||||||||||| ||||||    
T  17101914 ttggatgaaacgacaatccctatggatacgatactctacttatcactttattacttggtaaacgatttg 17101982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 9e-25; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 13128895 - 13128989
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatcaa 422  Q
    |||||||||||||||||| ||  |||||||||| | |||||||||| ||||||||||||||| ||||||||| |||||||||||||| |||||||    
T  13128895 ttggacgaaacgacaatccctatggatacaatactctacttatcattttattacttggtaaacgatttggtacacttgcctaattcgaacatcaa 13128989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 19562199 - 19562293
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatcaa 422  Q
    ||||| |||||||||||   || ||| || ||| |||||||||||  ||||||||||||||||||||||||| |||||| |||| ||||||||||    
T  19562199 ttggatgaaacgacaatacttgtggacacgatactttacttatcactttattacttggtaaatgatttggtacacttgcttaatccgcacatcaa 19562293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 334 - 411
Target Start/End: Complemental strand, 9052745 - 9052669
Alignment:
Q  334 gaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||| ||||||| ||||||||| ||| | |||||| ||| ||||||||||||||||||||||||| |||||||||||    
T  9052745 gaaacaacaatctttgcggatacgatactctactta-cattttattacttggtaaatgatttggtacacttgcctaat 9052669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 331 - 411
Target Start/End: Complemental strand, 17672077 - 17671997
Alignment:
Q  331 gacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||| ||||||  || |||||||||| | |||||||||  ||||||||||||||| ||||||||| |||||||||||    
T  17672077 gacgaaacaacaatccatgtggatacaatactctacttatcactttattacttggtaaacgatttggtacacttgcctaat 17671997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 411
Target Start/End: Original strand, 21323896 - 21323979
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||||||||||||||||| || |||||| ||| | |||| |||| ||||||| |||||||| ||||| ||| |||||||||||    
T  21323896 ttggacgaaacgacaatctatgtggatacgatactctactgatcacattattatttggtaaacgatttagtacacttgcctaat 21323979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 328 - 406
Target Start/End: Complemental strand, 13908932 - 13908854
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgc 406  Q
    ||||||||||||||||||  || |||||| ||| | |||||||||  ||||||||||||||| ||||||||| ||||||    
T  13908932 ttggacgaaacgacaatccttgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgc 13908854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 328 - 406
Target Start/End: Complemental strand, 20315078 - 20315000
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgc 406  Q
    ||||||||||||||||||  || |||||  ||||| |||||||||  ||||||||||||||| ||||||||| ||||||    
T  20315078 ttggacgaaacgacaatccttgtggatatgatattctacttatcaatttattacttggtaaacgatttggtacacttgc 20315000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 421
Target Start/End: Original strand, 12578287 - 12578380
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatca 421  Q
    |||||| |||||||||||  || |||||| ||| | || ||||||  |||||| |||||||||||||||||| ||||||||||| | |||||||    
T  12578287 ttggacaaaacgacaatccatgtggatacgatactctaattatcactttattatttggtaaatgatttggtacacttgcctaatcctcacatca 12578380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 334 - 411
Target Start/End: Complemental strand, 14648966 - 14648890
Alignment:
Q  334 gaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||||||| ||| |||||| ||| | |||||||||  ||||||||||||||| ||||||||| |||||||||||    
T  14648966 gaaacgacaatc-ctgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgcctaat 14648890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 328 - 411
Target Start/End: Original strand, 13692690 - 13692773
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||| |||||||||||||  || |||||  ||| | |||||||||  ||||||||||||||| ||||||||| |||||||||||    
T  13692690 ttggtcgaaacgacaatccatgtggatatgatactctacttatcactttattacttggtaaacgatttggtacacttgcctaat 13692773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 331 - 409
Target Start/End: Original strand, 19929699 - 19929777
Alignment:
Q  331 gacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgccta 409  Q
    |||||||||||||||  || |||||| ||| | || ||||||  || |||||||||||||||||||||| |||||||||    
T  19929699 gacgaaacgacaatccatgtggatacgatactctatttatcactttgttacttggtaaatgatttggtacacttgccta 19929777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 404
Target Start/End: Complemental strand, 7582375 - 7582299
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaactt 404  Q
    ||||||||||| ||||||  || |||||  ||| | |||||||||  ||||||||||||||||||||||||| ||||    
T  7582375 ttggacgaaacaacaatccatgtggatatgatactctacttatcactttattacttggtaaatgatttggtacactt 7582299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 425
Target Start/End: Original strand, 9737564 - 9737627
Alignment:
Q  362 tttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatcaaacc 425  Q
    |||||| ||||  ||||||||||||||| ||||||||| ||||||||||| ||  |||||||||    
T  9737564 tttactgatcactttattacttggtaaacgatttggtacacttgcctaatccgaccatcaaacc 9737627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 364 - 411
Target Start/End: Complemental strand, 12318475 - 12318428
Alignment:
Q  364 tacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||||  |||||||||||| |||||||||||| |||||||||||    
T  12318475 tacttatcactttattacttggttaatgatttggtacacttgcctaat 12318428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 406
Target Start/End: Complemental strand, 17709812 - 17709757
Alignment:
Q  351 ggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgc 406  Q
    |||||||||| | |||||||||  ||||||||||||||| ||||||||| ||||||    
T  17709812 ggatacaatactctacttatcactttattacttggtaaacgatttggtacacttgc 17709757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 362 - 411
Target Start/End: Original strand, 22357590 - 22357639
Alignment:
Q  362 tttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||||||  ||||||||||||||||||||| ||| |||| ||||||    
T  22357590 tttacttatcactttattacttggtaaatgatttagtacacttacctaat 22357639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 411
Target Start/End: Original strand, 17951340 - 17951400
Alignment:
Q  351 ggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||| ||| |||||||||||  ||| ||||||||||| ||||||||| ||||| |||||    
T  17951340 ggatacgatactttacttatcactttagtacttggtaaacgatttggtacacttgtctaat 17951400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 411
Target Start/End: Original strand, 17955192 - 17955252
Alignment:
Q  351 ggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||| ||| |||||||||||  ||| ||||||||||| ||||||||| ||||| |||||    
T  17955192 ggatacgatactttacttatcactttagtacttggtaaacgatttggtacacttgtctaat 17955252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 404
Target Start/End: Original strand, 19374834 - 19374909
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaactt 404  Q
    |||||| ||||||||||||| | |||||| ||| | |||||| ||| |||||||||| |||| ||||||||| ||||    
T  19374834 ttggacaaaacgacaatctcagtggatacgatactctactta-cattttattacttgataaacgatttggtacactt 19374909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 375 - 411
Target Start/End: Original strand, 20829806 - 20829842
Alignment:
Q  375 ttattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  20829806 ttattacttggtaaacgatttggtacacttgcctaat 20829842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 1e-20; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 327 - 422
Target Start/End: Original strand, 31804920 - 31805015
Alignment:
Q  327 gttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatcaa 422  Q
    ||||||||||||| ||||||||| |||||||||| | |||||||||  |||||| ||||||||  |||||||| |||| |||||||||||||||||    
T  31804920 gttggacgaaacggcaatctctgtggatacaatactctacttatcactttattatttggtaaacaatttggtacactttcctaattcgcacatcaa 31805015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 328 - 421
Target Start/End: Complemental strand, 15339316 - 15339223
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatca 421  Q
    ||||||||||||||||||  || |||||  ||| | ||||| |||  ||||||||||||||||||||||||| ||||||||||| |||||||||    
T  15339316 ttggacgaaacgacaatccatgtggatatgatactctacttttcactttattacttggtaaatgatttggtacacttgcctaatccgcacatca 15339223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 332 - 420
Target Start/End: Original strand, 29719256 - 29719344
Alignment:
Q  332 acgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatc 420  Q
    ||||||||||||||  || |||||| ||| | |||||||||  ||||||||||||||| ||||||||| ||||||||||| ||||||||    
T  29719256 acgaaacgacaatccttgtggatacgataatctacttatcactttattacttggtaaacgatttggtacacttgcctaatccgcacatc 29719344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 334 - 423
Target Start/End: Original strand, 25888247 - 25888336
Alignment:
Q  334 gaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatcaaa 423  Q
    ||||||||||||  || |||||| ||| | |||||||||  |||||||||||||||  |||||||| ||||||||||| |||||||||||    
T  25888247 gaaacgacaatccatgtggatacgatactgtacttatcactttattacttggtaaacaatttggtacacttgcctaatccgcacatcaaa 25888336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 411
Target Start/End: Complemental strand, 45553208 - 45553125
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||| ||||||||||| |||   |||| |||||||||||||||  |||||||||| |||| ||||||||| |||||||||||    
T  45553208 ttggacaaaacgacaatccctgtaaatacgatattttacttatcactttattacttgataaacgatttggtacacttgcctaat 45553125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 411
Target Start/End: Original strand, 12953318 - 12953398
Alignment:
Q  331 gacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||||||||||  || ||| |||||| | ||||||| |  |||||||||| |||||||||||||| |||||||||||    
T  12953318 gacgaaacgacaatccatgtggacacaatactctacttattactttattacttgataaatgatttggtacacttgcctaat 12953398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 17743497 - 17743576
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcc 407  Q
    ||||||||||||| ||||  || |||||| ||| | |||||||||  ||||||||||||||| ||||||||| |||||||    
T  17743497 ttggacgaaacgataatccatgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgcc 17743576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 411
Target Start/End: Original strand, 20174656 - 20174739
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||||||||||||||||  || ||| |  ||| | |||||||||  ||||||||||||||| ||||||||| |||| ||||||    
T  20174656 ttggacgaaacgacaatccatgtggaaatgatactctacttatcactttattacttggtaaacgatttggtacactttcctaat 20174739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 364 - 410
Target Start/End: Original strand, 8503127 - 8503173
Alignment:
Q  364 tacttatcatattattacttggtaaatgatttggtaaacttgcctaa 410  Q
    |||||||||  ||||||||||||||| ||||||||| ||||||||||    
T  8503127 tacttatcacgttattacttggtaaacgatttggtacacttgcctaa 8503173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 421
Target Start/End: Complemental strand, 17349434 - 17349343
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatca 421  Q
    ||||||||||||||||||| || |||||| ||| | |||||| ||  ||||||||||||||| ||||| ||| | |||||||||  ||||||||    
T  17349434 ttggacgaaacgacaatctttgtggatacgatactctactta-cactttattacttggtaaacgatttagtaca-ttgcctaatctgcacatca 17349343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 423
Target Start/End: Complemental strand, 25618631 - 25618540
Alignment:
Q  331 gacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatcaaa 423  Q
    |||||||||||||||  || |||||  ||| | |||||||||  |||||||||||| || |||||| ||  |||||||||| |||||||||||    
T  25618631 gacgaaacgacaatccatgtggatatgatactctacttatcactttattacttggt-aacgatttgatacgcttgcctaatccgcacatcaaa 25618540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 351 - 407
Target Start/End: Original strand, 27909163 - 27909219
Alignment:
Q  351 ggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcc 407  Q
    |||||| ||| | |||||||||  ||||||||||||||| ||||||||| |||||||    
T  27909163 ggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgcc 27909219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 411
Target Start/End: Complemental strand, 32085538 - 32085458
Alignment:
Q  331 gacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||||||||||  || |||||  ||| | |||||||||  |||||||||||||||  |||||||| |||| ||||||    
T  32085538 gacgaaacgacaatccatgtggatatgatactctacttatcactttattacttggtaaacaatttggtacacttacctaat 32085458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 5e-20; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 23099973 - 23100067
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatcaa 422  Q
    ||||||||||||||||||| || |||||| ||| | |||||||||  |||||| |||||||| ||||||||| |||||||||||||| |||||||    
T  23099973 ttggacgaaacgacaatctatgtggatacgatactctacttatcactttattatttggtaaacgatttggtacacttgcctaattcgaacatcaa 23100067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 423
Target Start/End: Original strand, 2350768 - 2350863
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatcaaa 423  Q
    |||||| |||||||||||  || |||||| ||| | |||||| ||  ||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  2350768 ttggacaaaacgacaatccatgtggatacgataatctacttagcagtttattacttggtaaatgatttggtacacttgcctaatccgcacatcaaa 2350863  T

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Target: chr7; HSP #3
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 328 - 411
Target Start/End: Complemental strand, 5530099 - 5530016
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||||||||||| |||||||| |||||| ||  |||||||||||| |||||||||||||||  |||||||| || ||||||||    
T  5530099 ttggacgaaacgaaaatctctgtggatacgatgctttacttatcattttattacttggtaaacaatttggtacacctgcctaat 5530016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 331 - 411
Target Start/End: Original strand, 10587048 - 10587128
Alignment:
Q  331 gacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||||||||||||| |||  ||||| ||| | |||||||||  ||||||||||||||| ||||||||| |||||||||||    
T  10587048 gacgaaacgacaatccctgtagatacgatactctacttatcactttattacttggtaaacgatttggtacacttgcctaat 10587128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 411
Target Start/End: Original strand, 11221189 - 11221268
Alignment:
Q  332 acgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||||||||| ||| |||||||||| | |||||||||  ||||||||| ||||| ||||||||| |||||| ||||    
T  11221189 acgaaacgacaatccctgtggatacaatactctacttatcaatttattacttagtaaacgatttggtacacttgcttaat 11221268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 411
Target Start/End: Original strand, 16297841 - 16297924
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||||| |||||||  || | |||| ||| | ||||||||| ||||||||||||||||| |||||||| |||||||||||    
T  16297841 ttggacgaaatgacaatccatgtgaatacgataatctacttatcacattattacttggtaaattatttggtacacttgcctaat 16297924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 328 - 422
Target Start/End: Complemental strand, 2563895 - 2563802
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatcaa 422  Q
    ||||||||||||||||||  || |||||| ||| | |||||| ||  ||||||||||||||| ||||||||| |||||| |||| ||||||||||    
T  2563895 ttggacgaaacgacaatccttgtggatacgatactctactta-cactttattacttggtaaacgatttggtacacttgcataatccgcacatcaa 2563802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 421
Target Start/End: Original strand, 3329679 - 3329772
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatca 421  Q
    ||||| ||||||||||||  || |||||| ||| | |||||||||  |||||||||||||||| ||||| || |||| |||||| |||||||||    
T  3329679 ttggatgaaacgacaatccatgtggatacgatactctacttatcactttattacttggtaaataatttgatacacttacctaatccgcacatca 3329772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 411
Target Start/End: Complemental strand, 7318348 - 7318268
Alignment:
Q  331 gacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||||||||||  || |||||| ||| | |||||||||  ||||||||||||||| ||| ||||| |||||||||||    
T  7318348 gacgaaacgacaatccatgtggatacgatactctacttatcactttattacttggtaaacgatatggtacacttgcctaat 7318268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 395
Target Start/End: Original strand, 8313419 - 8313483
Alignment:
Q  331 gacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgattt 395  Q
    ||||||||||||||| ||| |||||| ||| | |||||||||  |||||||||||||||||||||    
T  8313419 gacgaaacgacaatccctgtggatacgataatctacttatcactttattacttggtaaatgattt 8313483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 331 - 414
Target Start/End: Complemental strand, 9500519 - 9500436
Alignment:
Q  331 gacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcg 414  Q
    |||||||| ||||||  || |||||| ||| | || | |||| |||||||||||||||||||||| ||| ||||||||||||||    
T  9500519 gacgaaacaacaatccttgtggatacgatactctaatgatcacattattacttggtaaatgattttgtacacttgcctaattcg 9500436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 18369001 - 18369080
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcc 407  Q
    |||||||||||||||||| ||  |||||||||| | |||||||||  |||||||||||||||  |||| ||| |||||||    
T  18369001 ttggacgaaacgacaatccctatggatacaatactctacttatcactttattacttggtaaactatttagtacacttgcc 18369080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 328 - 414
Target Start/End: Original strand, 22339332 - 22339421
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatca---tattattacttggtaaatgatttggtaaacttgcctaattcg 414  Q
    ||||||||||||||||||  ||||||| | ||| |||||||||||   || ||||||||| |||||||||||||| | ||| ||||||||    
T  22339332 ttggacgaaacgacaatccttgcggatgcgatactttacttatcactttaatattacttgataaatgatttggtacatttgtctaattcg 22339421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 422
Target Start/End: Complemental strand, 6042534 - 6042445
Alignment:
Q  332 acgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatcaa 422  Q
    |||||||||||| ||||| |||||| ||| | |||||| ||| ||||||| ||||||| |||||| || ||||| ||||| ||||||||||    
T  6042534 acgaaacgacaacctctgtggatacgatactctactta-cattttattacatggtaaacgatttgatacacttgtctaatccgcacatcaa 6042445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 422
Target Start/End: Original strand, 9731648 - 9731742
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatcaa 422  Q
    ||||||||||||||||||  || || ||| ||| | |||||||||  ||| |||||  |||| ||||||||| ||||||||||| ||||||||||    
T  9731648 ttggacgaaacgacaatccttgtggttacgatactctacttatcactttactactttttaaacgatttggtacacttgcctaatccgcacatcaa 9731742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 421
Target Start/End: Complemental strand, 5108643 - 5108551
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatca 421  Q
    ||||||||||||||||||  || |||||| ||| | |||||| ||  |||||||||||||||| |||||||| ||||||| ||| | |||||||    
T  5108643 ttggacgaaacgacaatccttgtggatacgatactctactta-cactttattacttggtaaataatttggtacacttgccaaatccacacatca 5108551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 404
Target Start/End: Original strand, 8979027 - 8979103
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaactt 404  Q
    ||||||||||| ||||||  || |||||  ||| | |||||||||  ||||||||||||||||||||||||| ||||    
T  8979027 ttggacgaaacaacaatccatgtggatatgatactctacttatcactttattacttggtaaatgatttggtacactt 8979103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 411
Target Start/End: Complemental strand, 9574482 - 9574402
Alignment:
Q  331 gacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||| ||||||||||  ||||| ||| | |||||||||  ||||| ||||||||| ||||| ||| |||||||||||    
T  9574482 gacgaaacaacaatctctgtagatacgatactctacttatcactttattccttggtaaacgatttagtacacttgcctaat 9574402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 411
Target Start/End: Original strand, 9864350 - 9864430
Alignment:
Q  331 gacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||||||||||  || |||||  ||| | |||||||||  |||||||||||||||  |||||||| |||||||||||    
T  9864350 gacgaaacgacaatccttgtggatatgatactctacttatcactttattacttggtaaacaatttggtacacttgcctaat 9864430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 334 - 410
Target Start/End: Complemental strand, 10937674 - 10937598
Alignment:
Q  334 gaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaa 410  Q
    ||||||||||||  || |||||| ||| | |||||||||  ||||||||||||||| |||||| || ||||||||||    
T  10937674 gaaacgacaatccatgtggatacgatactatacttatcactttattacttggtaaacgatttgatacacttgcctaa 10937598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 410
Target Start/End: Original strand, 5047454 - 5047489
Alignment:
Q  375 ttattacttggtaaatgatttggtaaacttgcctaa 410  Q
    ||||||||||||||||||||||||| ||||||||||    
T  5047454 ttattacttggtaaatgatttggtacacttgcctaa 5047489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 8054510 - 8054589
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcc 407  Q
    |||||||||||||||||  ||| | |||| ||| | |||||||||  |||||| |||||||| ||||||||| |||||||    
T  8054510 ttggacgaaacgacaattcctgtgaatacgatactctacttatcactttattatttggtaaacgatttggtacacttgcc 8054589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 411
Target Start/End: Complemental strand, 15869653 - 15869590
Alignment:
Q  348 tgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||||||| ||| | |||||||||  ||||||||||||||| |||||| || |||||||||||    
T  15869653 tgcggatacgatactctacttatcactttattacttggtaaacgatttgatacacttgcctaat 15869590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 421
Target Start/End: Complemental strand, 4785914 - 4785822
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatca 421  Q
    |||||||||||||||||| ||| ||||   ||| | |||||||||  |||||||||||| || |||||| || ||||||||||  |||||||||    
T  4785914 ttggacgaaacgacaatccctgtggatgtgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaaaccgcacatca 4785822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 421
Target Start/End: Complemental strand, 4818914 - 4818822
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatca 421  Q
    |||||||||||||||||| ||| ||||   ||| | |||||||||  |||||||||||| || |||||| || ||||||||||  |||||||||    
T  4818914 ttggacgaaacgacaatccctgtggatgtgatactctacttatcactttattacttggt-aacgatttgatacacttgcctaaaccgcacatca 4818822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 411
Target Start/End: Original strand, 10584513 - 10584590
Alignment:
Q  334 gaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||||||||||  || |||||| ||| ||| |||||||  |||||||||| |||| ||||||||| ||||| |||||    
T  10584513 gaaacgacaatccatgtggatacgatactttgcttatcactttattacttgataaacgatttggtacacttgtctaat 10584590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 411
Target Start/End: Complemental strand, 1584618 - 1584540
Alignment:
Q  331 gacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||| |||||| ||| |||||| ||| |  ||||||||  |||||||||||||||||| |||||| |||||||||||    
T  1584618 gacgaaacaacaatccctgtggatacgatactc-acttatcactttattacttggtaaatga-ttggtacacttgcctaat 1584540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 375 - 411
Target Start/End: Complemental strand, 1814146 - 1814110
Alignment:
Q  375 ttattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||||||||||| |||||||| |||||||||||    
T  1814146 ttattacttggtaaataatttggtacacttgcctaat 1814110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 334 - 410
Target Start/End: Complemental strand, 9916638 - 9916562
Alignment:
Q  334 gaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaa 410  Q
    ||||| ||||||  || |||||| ||| | ||||||| |  ||||||| ||||||||||||||||| ||||||||||    
T  9916638 gaaactacaatccatgtggatacgatactctacttattactttattacgtggtaaatgatttggtatacttgcctaa 9916562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 334 - 410
Target Start/End: Complemental strand, 9924550 - 9924474
Alignment:
Q  334 gaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaa 410  Q
    ||||| ||||||  || |||||| ||| | ||||||| |  ||||||| ||||||||||||||||| ||||||||||    
T  9924550 gaaactacaatccatgtggatacgatactctacttattactttattacgtggtaaatgatttggtatacttgcctaa 9924474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 404
Target Start/End: Original strand, 13759881 - 13759957
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaactt 404  Q
    ||||||||||||||||||  || |||||  ||| | |||||||||  |||||| |||||||| ||||||||| ||||    
T  13759881 ttggacgaaacgacaatccttgtggatatgatactctacttatcactttattaattggtaaacgatttggtacactt 13759957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 334 - 410
Target Start/End: Complemental strand, 18449314 - 18449238
Alignment:
Q  334 gaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaa 410  Q
    |||||||||||| ||  |||||| ||||| ||||| |||  |||||||||||||||  ||||| || ||||||||||    
T  18449314 gaaacgacaatccctatggatacgatattatacttctcactttattacttggtaaacaatttgatacacttgcctaa 18449238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 383
Target Start/End: Complemental strand, 18467526 - 18467474
Alignment:
Q  331 gacgaaacgacaatctctgcggatacaatattttacttatcatattattactt 383  Q
    |||||||||||||||  || |||||||||| |||||||||||  |||||||||    
T  18467526 gacgaaacgacaatccatgtggatacaatactttacttatcactttattactt 18467474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 375 - 411
Target Start/End: Complemental strand, 19153329 - 19153293
Alignment:
Q  375 ttattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  19153329 ttattacttggtaaaagatttggtacacttgcctaat 19153293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 375 - 411
Target Start/End: Complemental strand, 20752728 - 20752692
Alignment:
Q  375 ttattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  20752728 ttattacttggtaaaagatttggtacacttgcctaat 20752692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 411
Target Start/End: Complemental strand, 21230387 - 21230307
Alignment:
Q  331 gacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||||| |||| ||  | |||| ||| | |||||||||| |||||| |||||||| |||||| || |||||||||||    
T  21230387 gacgaaacgataatccctatgaatacgatactctacttatcattttattatttggtaaacgatttgatatacttgcctaat 21230307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 408
Target Start/End: Complemental strand, 31493008 - 31492928
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcct 408  Q
    |||||| |||||||||||  || |||||| ||| | |||||||||  ||||||| ||||||| |||||| || ||||||||    
T  31493008 ttggacaaaacgacaatccatgtggatacgatactctacttatcactttattacctggtaaacgatttgatacacttgcct 31492928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 421
Target Start/End: Complemental strand, 23143800 - 23143707
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatca 421  Q
    |||||||||||||||||| ||| |||||  ||| | |||||||||  |||||| |||||||||||||||||| ||||||||||| |||||||||    
T  23143800 ttggacgaaacgacaatccctgtggatatgatactctacttatcactttattaattggtaaatgatttggtacacttgcctaatccgcacatca 23143707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 411
Target Start/End: Complemental strand, 21907510 - 21907427
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||||||||||||||||  || |||||| ||| |||||||||||  ||||||||||||||| ||||||||| |||||||||||    
T  21907510 ttggacgaaacgacaatccttgtggatacgatactttacttatcactttattacttggtaaacgatttggtatacttgcctaat 21907427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 418
Target Start/End: Complemental strand, 17729230 - 17729140
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcaca 418  Q
    ||||||||||||||||||| || |||||| ||| | |||||||||  ||||||||||||||| ||||||||| |||| |||||| ||||||    
T  17729230 ttggacgaaacgacaatctttgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttacctaatccgcaca 17729140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 328 - 411
Target Start/End: Complemental strand, 9726100 - 9726017
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||||||||||||||||  || |||||| ||| | |||||||||  ||||||||||||||| ||||||||| |||||||||||    
T  9726100 ttggacgaaacgacaatccatgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgcctaat 9726017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 330 - 422
Target Start/End: Original strand, 12183354 - 12183446
Alignment:
Q  330 ggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatcaa 422  Q
    |||||||| |||||||  || |||||| ||| | |||||||||  ||||||||||||||| ||||||||| |||||| |||| ||||||||||    
T  12183354 ggacgaaatgacaatccatgtggatacgatactgtacttatcactttattacttggtaaacgatttggtacacttgcataatccgcacatcaa 12183446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 364 - 421
Target Start/End: Original strand, 14079501 - 14079558
Alignment:
Q  364 tacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatca 421  Q
    |||||||||  |||| |||||||||| ||||||||| |||||||||||||||||||||    
T  14079501 tacttatcactttataacttggtaaacgatttggtacacttgcctaattcgcacatca 14079558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 421
Target Start/End: Original strand, 21672456 - 21672549
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatca 421  Q
    |||||||||| || ||||  || |||||| ||| | |||||||||  ||||||||||||||| ||||||||  ||||||||||| |||||||||    
T  21672456 ttggacgaaaagataatccatgtggatacgatactctacttatcactttattacttggtaaacgatttggtgcacttgcctaatccgcacatca 21672549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 328 - 411
Target Start/End: Complemental strand, 19244663 - 19244580
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||||||||||||||||   ||| | ||| | |||||||||  ||||||||||||||| ||| | |||||||||||||||    
T  19244663 ttggacgaaacgacaatctctatagattcgatactctacttatcactttattacttggtaaacgatctagtaaacttgcctaat 19244580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 328 - 411
Target Start/End: Complemental strand, 22567918 - 22567835
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||||||||| ||||||  || |||||||||| | ||||| |||  |||||||||||||||  |||||||| |||||||||||    
T  22567918 ttggacgaaaccacaatccatgtggatacaatactatacttttcacgttattacttggtaaacaatttggtacacttgcctaat 22567835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 328 - 399
Target Start/End: Original strand, 23645788 - 23645859
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggta 399  Q
    |||||||||||||||||| ||  |||||| ||| | |||||||||  ||||||||||||||| |||||||||    
T  23645788 ttggacgaaacgacaatccctatggatacgatactctacttatcactttattacttggtaaacgatttggta 23645859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 328 - 411
Target Start/End: Original strand, 25927324 - 25927407
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||||||||| | ||||  || |||||| ||||| |||||||||  ||||||||||||||| | ||||||| |||||||||||    
T  25927324 ttggacgaaactaaaatccatgtggatacgatattctacttatcactttattacttggtaaacgttttggtacacttgcctaat 25927407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 364 - 422
Target Start/End: Complemental strand, 5624682 - 5624624
Alignment:
Q  364 tacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatcaa 422  Q
    |||||||||  ||||||||||||||| ||||||||| | ||||||||| ||||||||||    
T  5624682 tacttatcactttattacttggtaaacgatttggtacatttgcctaatacgcacatcaa 5624624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 405
Target Start/End: Complemental strand, 9516863 - 9516786
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttg 405  Q
    ||||||||||||||||||  || |||||| ||| | |||||||||  |||||||| |||||| ||||||||| |||||    
T  9516863 ttggacgaaacgacaatccatgtggatacgatactctacttatcactttattactaggtaaacgatttggtacacttg 9516786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 421
Target Start/End: Original strand, 21679872 - 21679965
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatca 421  Q
    |||||||||| || ||||  || |||||| ||| | |||||||||  ||||||||| ||||| ||||||||  ||||||||||| |||||||||    
T  21679872 ttggacgaaaagataatccatgtggatacgatactctacttatcactttattacttagtaaacgatttggtgcacttgcctaatccgcacatca 21679965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 404
Target Start/End: Original strand, 23844486 - 23844562
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaactt 404  Q
    |||||||||||||||||| ||   ||||  ||| | |||||||||| ||||||||||||||| ||||||||| ||||    
T  23844486 ttggacgaaacgacaatccctttagatatgatactctacttatcattttattacttggtaaacgatttggtacactt 23844562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 334 - 389
Target Start/End: Original strand, 22410354 - 22410409
Alignment:
Q  334 gaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaa 389  Q
    |||||||||||| ||| |||||| ||| | |||||||||| |||||||||||||||    
T  22410354 gaaacgacaatccctgtggatacgatactctacttatcattttattacttggtaaa 22410409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 414
Target Start/End: Original strand, 20002440 - 20002489
Alignment:
Q  365 acttatcatattattacttggtaaatgatttggtaaacttgcctaattcg 414  Q
    ||||||||  |||||||||||||| |||||||||| ||||||||| ||||    
T  20002440 acttatcactttattacttggtaattgatttggtacacttgcctatttcg 20002489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 327 - 411
Target Start/End: Complemental strand, 4339814 - 4339730
Alignment:
Q  327 gttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||||| |||||||||||  || |||||||||| | |||||||||  |||||| ||| ||||  |||||||| ||||| |||||    
T  4339814 gttggacaaaacgacaatcattgtggatacaatactctacttatcactttattatttgataaacaatttggtacacttgtctaat 4339730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 375 - 411
Target Start/End: Complemental strand, 15466401 - 15466365
Alignment:
Q  375 ttattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  15466401 ttattacttggtaaacgatttggtacacttgcctaat 15466365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 17)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 422
Target Start/End: Complemental strand, 21301996 - 21301902
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatcaa 422  Q
    |||||||||| |||||||  || |||||| ||| | |||||||||  ||||||||||||||| ||||||||| ||||||||||| ||||||||||    
T  21301996 ttggacgaaatgacaatccatgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgcctaatccgcacatcaa 21301902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 331 - 412
Target Start/End: Complemental strand, 10744977 - 10744896
Alignment:
Q  331 gacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaatt 412  Q
    ||||||||||||||| ||  ||| || ||| | |||||||||  ||||||||||||||| ||||||||||||||||||||||    
T  10744977 gacgaaacgacaatccctatggaaacgatactctacttatcactttattacttggtaaacgatttggtaaacttgcctaatt 10744896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 421
Target Start/End: Complemental strand, 41508445 - 41508352
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatca 421  Q
    |||||| ||||||||||| | || ||||| ||||| ||| |||||  |||||||||| |||| ||||||||| ||||||||||| |||||||||    
T  41508445 ttggactaaacgacaatccccgcagatacgatattctacctatcactttattacttgataaacgatttggtacacttgcctaatccgcacatca 41508352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 411
Target Start/End: Original strand, 12805911 - 12805994
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||| ||||||||||||  || |||||  ||| | |||||||||  ||||||||||||||||||||||||| |||||||||||    
T  12805911 ttggatgaaacgacaatccatgtggatatgatactctacttatcactttattacttggtaaatgatttggtacacttgcctaat 12805994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 411
Target Start/End: Complemental strand, 21325418 - 21325335
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||||||||||||||| | || |||||| ||| | |||||||||  |||||||||||||||  |||||||| |||||||||||    
T  21325418 ttggacgaaacgacaatttttgtggatacgatactatacttatcagtttattacttggtaaacaatttggtacacttgcctaat 21325335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 328 - 414
Target Start/End: Original strand, 3116440 - 3116525
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcg 414  Q
    |||||||||||||||||| ||| |||||| ||| |  ||||||||  |||||||||||||||  |||||||| ||||||||||||||    
T  3116440 ttggacgaaacgacaatccctgtggatactatactc-acttatcactttattacttggtaaacaatttggtacacttgcctaattcg 3116525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 328 - 423
Target Start/End: Complemental strand, 5508413 - 5508319
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatcaaa 423  Q
    ||||||||||||||||||  || |||||  ||| |  ||||||||  ||||||||||| ||||||||||||| ||||||||||||||  |||||||    
T  5508413 ttggacgaaacgacaatccatgtggatattatactc-acttatcactttattacttggcaaatgatttggtacacttgcctaattcgaccatcaaa 5508319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 405
Target Start/End: Complemental strand, 22349487 - 22349410
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttg 405  Q
    ||||||||||||||||| | || |||||| ||| | |||||||||  |||||| |||||||| ||||||||| |||||    
T  22349487 ttggacgaaacgacaatttatgtggatacgatactctacttatcactttattatttggtaaacgatttggtacacttg 22349410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 411
Target Start/End: Complemental strand, 10917993 - 10917913
Alignment:
Q  331 gacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||| ||||||  || |||||| ||| | |||||||||  |||||| |||||||| ||||||||| |||||||||||    
T  10917993 gacgaaacaacaatccatgtggatacgatactctacttatcactttattatttggtaaacgatttggtacacttgcctaat 10917913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 332 - 408
Target Start/End: Complemental strand, 12411225 - 12411149
Alignment:
Q  332 acgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcct 408  Q
    ||||||||||||||  || |||||| ||| | |||| ||||  |||||||||||||| |||||||||| ||||||||    
T  12411225 acgaaacgacaatccttgtggatacgatactctactaatcactttattacttggtaagtgatttggtacacttgcct 12411149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 4650309 - 4650231
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcc 407  Q
    |||| ||||| ||||||| ||| |||||| ||| |||||| ||||  |||||||||||||||||| |||||| |||||||    
T  4650309 ttgggcgaaaggacaatccctgtggatacgatactttactcatcactttattacttggtaaatga-ttggtacacttgcc 4650231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 411
Target Start/End: Complemental strand, 8319113 - 8319035
Alignment:
Q  332 acgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||||||| |||| ||| |||||| ||||| |||||||||  | ||||||||||||| || |||||| |||||||||||    
T  8319113 acgaaacgataatccctgtggatactatattctacttatcacttcattacttggtaaacga-ttggtatacttgcctaat 8319035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 411
Target Start/End: Original strand, 31286037 - 31286118
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||||||||| |||||| ||| |||||| ||||| || ||| ||  ||||||||||||||||||||||||| ||||| |||||    
T  31286037 ttggacgaaac-acaatccctgtggatacgatattctagtta-cactttattacttggtaaatgatttggtacacttgtctaat 31286118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 364 - 422
Target Start/End: Original strand, 16245786 - 16245844
Alignment:
Q  364 tacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatcaa 422  Q
    |||||||||  ||||||||||||||| || |||||| ||||| ||||| ||||||||||    
T  16245786 tacttatcactttattacttggtaaacgagttggtacacttgtctaatccgcacatcaa 16245844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 328 - 406
Target Start/End: Complemental strand, 19908385 - 19908307
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgc 406  Q
    |||||||||||||| | |  || |||||| ||| | |||||||||| |||||| |||||||| ||||||||| ||||||    
T  19908385 ttggacgaaacgacgacccttgtggatacgatactatacttatcattttattatttggtaaacgatttggtacacttgc 19908307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 421
Target Start/End: Original strand, 2167638 - 2167730
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatca 421  Q
    ||||||||||||||| | | || |||||| ||| | |||||||||  |||||||||||| || ||||||||| ||||| |||||  ||||||||    
T  2167638 ttggacgaaacgacattttatgtggatacgatactctacttatcactttattacttggt-aacgatttggtacacttgtctaatctgcacatca 2167730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 334 - 410
Target Start/End: Complemental strand, 28729016 - 28728940
Alignment:
Q  334 gaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaa 410  Q
    ||||||||||||| || |||||| ||| | |||||||||  |||||||||| ||||| |||||  | ||||||||||    
T  28729016 gaaacgacaatctatgtggatacgatactctacttatcactttattacttgataaattatttgacacacttgcctaa 28728940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 328 - 411
Target Start/End: Complemental strand, 806 - 723
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||||||||||||||||  ||  ||||||||| | |||||||||  ||||||||||||||| ||||||||| |||||||||||    
T  806 ttggacgaaacgacaatccttgttgatacaatactctacttatcactttattacttggtaaacgatttggtacacttgcctaat 723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 44; Significance: 8e-16; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 14779643 - 14779564
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcc 407  Q
    |||||||||||||||||| ||| |||||  ||| | || |||||| |||||||||||||||||||||||||| |||||||    
T  14779643 ttggacgaaacgacaatccctgtggatatgatactctaattatcacattattacttggtaaatgatttggtacacttgcc 14779564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 421
Target Start/End: Complemental strand, 17359240 - 17359147
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatca 421  Q
    ||||||||||||||||||| |  |||||  ||| |  ||||||||  ||||||||||||||| ||||||||| ||||||||||| |||||||||    
T  17359240 ttggacgaaacgacaatctttatggatatgatactcaacttatcactttattacttggtaaacgatttggtacacttgcctaatccgcacatca 17359147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 421
Target Start/End: Complemental strand, 21449167 - 21449074
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatca 421  Q
    |||| |||||||||||||  || |||||| ||| | |||||||||  ||||||||||||||| ||||||||| |||||||| || |||||||||    
T  21449167 ttggccgaaacgacaatccttgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgcctgatccgcacatca 21449074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 15543987 - 15544066
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcc 407  Q
    ||||||||||||||||| || | |||||| ||| | |||||||||  ||||||||||||||| ||||||||| |||||||    
T  15543987 ttggacgaaacgacaatttccgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgcc 15544066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 25405651 - 25405730
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcc 407  Q
    ||||||||||||||||||  || |||||| ||| |||||||||||  ||||||||||||||| || |||||| |||||||    
T  25405651 ttggacgaaacgacaatccttgtggatacgatactttacttatcactttattacttggtaaacgacttggtacacttgcc 25405730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 353 - 411
Target Start/End: Original strand, 27117764 - 27117822
Alignment:
Q  353 atacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||| | |||||||||  ||||||||||||||| |||||||||||||||||||||    
T  27117764 atacaatactctacttatcactttattacttggtaaacgatttggtaaacttgcctaat 27117822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 411
Target Start/End: Original strand, 9787903 - 9787983
Alignment:
Q  331 gacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||||||||| | |  |||||| ||| | |||||||||  |||||||||| |||||||||||||| |||||||||||    
T  9787903 gacgaaacgacaatttatatggatacgatactctacttatcactttattacttgctaaatgatttggtacacttgcctaat 9787983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 12208679 - 12208600
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcc 407  Q
    ||||||||||||||||||  || |||||  ||||| |||||||||  ||||||||||||||| ||||| ||| |||||||    
T  12208679 ttggacgaaacgacaatccatgtggatatgatattctacttatcactttattacttggtaaacgatttagtacacttgcc 12208600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 328 - 411
Target Start/End: Complemental strand, 21847711 - 21847629
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||||||||||||||||  || |||||||||| | ||||||   | ||||||||||||||| ||||||||| |||||||||||    
T  21847711 ttggacgaaacgacaatccatgtggatacaatactctacttagact-ttattacttggtaaacgatttggtacacttgcctaat 21847629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 328 - 411
Target Start/End: Original strand, 26648992 - 26649074
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||||||||||| ||||  || ||||||||||||  ||||||||| ||||||||||||||| |||||| || ||||| |||||    
T  26648992 ttggacgaaacgataatccatgtggatacaatattc-acttatcattttattacttggtaaacgatttgatacacttgtctaat 26649074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 328 - 405
Target Start/End: Original strand, 17610277 - 17610354
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttg 405  Q
    ||||||||||||||||||  || |||||| ||| | ||||||| |  ||||||||||||||| ||||||||| |||||    
T  17610277 ttggacgaaacgacaatccatgtggatacgatactctacttataactttattacttggtaaacgatttggtacacttg 17610354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 351 - 411
Target Start/End: Complemental strand, 16359925 - 16359866
Alignment:
Q  351 ggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||||| | |||||| ||| ||||||||||||||| ||||||||| |||||||||||    
T  16359925 ggatacaatactatactta-cattttattacttggtaaacgatttggtacacttgcctaat 16359866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 411
Target Start/End: Original strand, 23038036 - 23038115
Alignment:
Q  331 gacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||||||||||  || |||||| ||| |  ||||||||  ||||||||||||||| ||||||||| |||||||||||    
T  23038036 gacgaaacgacaatccatgtggatacgatactc-acttatcactttattacttggtaaacgatttggtacacttgcctaat 23038115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 411
Target Start/End: Original strand, 3591674 - 3591757
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||| |||||||||||| || |||||| ||| | || ||||||  |||||||||| |||| ||||| ||| |||||||||||    
T  3591674 ttggacaaaacgacaatctatgtggatacgatactctatttatcactttattacttgataaacgattttgtacacttgcctaat 3591757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 407
Target Start/End: Original strand, 18736265 - 18736340
Alignment:
Q  332 acgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcc 407  Q
    |||||||||||||| ||| |||||| |||   |||||||||  |||||||||| |||| ||||||||| |||||||    
T  18736265 acgaaacgacaatccctgtggatacgatacactacttatcactttattacttgttaaacgatttggtacacttgcc 18736340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 364 - 414
Target Start/End: Complemental strand, 22664248 - 22664198
Alignment:
Q  364 tacttatcatattattacttggtaaatgatttggtaaacttgcctaattcg 414  Q
    |||||||||  ||||||||||||||| ||||||||| | ||||||||||||    
T  22664248 tacttatcactttattacttggtaaacgatttggtacatttgcctaattcg 22664198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 421
Target Start/End: Original strand, 13345357 - 13345450
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatca 421  Q
    |||||| |||||||||||  || |||||  ||| | |||||||||  |||||||||||||||  |||||||| ||||||| ||| | |||||||    
T  13345357 ttggacaaaacgacaatccatgtggatatgatactctacttatcactttattacttggtaaacaatttggtacacttgcccaatccacacatca 13345450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 412
Target Start/End: Original strand, 32383066 - 32383103
Alignment:
Q  375 ttattacttggtaaatgatttggtaaacttgcctaatt 412  Q
    ||||||||||||||| ||||||||| ||||||||||||    
T  32383066 ttattacttggtaaacgatttggtacacttgcctaatt 32383103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 411
Target Start/End: Original strand, 24267806 - 24267886
Alignment:
Q  331 gacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||| ||||||| |  |||||  ||| | |||||||||| |||||||||| ||||||||||| || ||||| |||||    
T  24267806 gacgaaacaacaatctatatggatatgatactatacttatcattttattacttgataaatgatttgatacacttgtctaat 24267886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 364 - 412
Target Start/End: Complemental strand, 24281319 - 24281271
Alignment:
Q  364 tacttatcatattattacttggtaaatgatttggtaaacttgcctaatt 412  Q
    |||||||||  ||||||||||||||| ||||||||| | ||||||||||    
T  24281319 tacttatcactttattacttggtaaacgatttggtacatttgcctaatt 24281271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 328 - 408
Target Start/End: Complemental strand, 69991 - 69911
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcct 408  Q
    ||||||||||||||||||  || | |||| ||| ||||||| |||  ||||||||||||||||||||||||| ||||||||    
T  69991 ttggacgaaacgacaatccttgtgtatacgatactttacttgtcactttattacttggtaaatgatttggtacacttgcct 69911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 335 - 411
Target Start/End: Complemental strand, 54931 - 54855
Alignment:
Q  335 aaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||||||||| ||| |||||||||| | |||||||||  ||||||||||||||| ||||||||| |||| ||||||    
T  54931 aaacgacaatccctgtggatacaatactctacttatcactttattacttggtaaacgatttggtacactttcctaat 54855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 330 - 422
Target Start/End: Original strand, 25402360 - 25402452
Alignment:
Q  330 ggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatcaa 422  Q
    |||||||||||||||| ||| |||||||||| | |||||||||  |  |||||||| |||  |||||||| |||||||||||| |||||||||    
T  25402360 ggacgaaacgacaatccctgtggatacaatactctacttatcacttccttacttggcaaacaatttggtacacttgcctaatttgcacatcaa 25402452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 328 - 407
Target Start/End: Original strand, 15375903 - 15375982
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcc 407  Q
    |||||||||||||||||| ||| |||||  ||| | |||||||||| |||||| |||||||| ||||||||| |||||||    
T  15375903 ttggacgaaacgacaatccctgtggataggatactctacttatcattttattatttggtaaacgatttggtacacttgcc 15375982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 328 - 420
Target Start/End: Original strand, 25550525 - 25550617
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaattcgcacatc 420  Q
    |||||||||| ||||||| ||| |||||  ||| | |||||||||  ||||||||||||||| |||||| || |||||||||||  |||||||    
T  25550525 ttggacgaaatgacaatccctgtggatatgatactctacttatcactttattacttggtaaacgatttgatacacttgcctaatctgcacatc 25550617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 331 - 411
Target Start/End: Original strand, 24852196 - 24852276
Alignment:
Q  331 gacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||| ||||||  || |||||| ||| | |||||||||| ||||||||||||||  ||||| ||| |||||||||||    
T  24852196 gacgaaacaacaatccatgtggatacgatactatacttatcattttattacttggtaatcgatttagtagacttgcctaat 24852276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 407
Target Start/End: Complemental strand, 24140520 - 24140442
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcc 407  Q
    |||||||||| ||||||| | | |||||||||| | |||||||||  ||||||||||||||| || |||||| |||||||    
T  24140520 ttggacgaaaggacaatcccagtggatacaatactctacttatcactttattacttggtaaacga-ttggtacacttgcc 24140442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 414
Target Start/End: Original strand, 24267022 - 24267061
Alignment:
Q  375 ttattacttggtaaatgatttggtaaacttgcctaattcg 414  Q
    ||||||||||||||| ||||||||| ||||||||||||||    
T  24267022 ttattacttggtaaacgatttggtacacttgcctaattcg 24267061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 375 - 414
Target Start/End: Original strand, 24343653 - 24343692
Alignment:
Q  375 ttattacttggtaaatgatttggtaaacttgcctaattcg 414  Q
    ||||||||||||||| ||||||||| ||||||||||||||    
T  24343653 ttattacttggtaaacgatttggtacacttgcctaattcg 24343692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 411
Target Start/End: Complemental strand, 15690856 - 15690773
Alignment:
Q  327 gttggacgaaacgacaatctct-gcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||||||||||||| ||| | |||||| ||| | |||||||||  |||||| |||||||| |||||||||||||| ||||||    
T  15690856 gttggacgaaacgacaat-tctcgtggatacgatactctacttatcactttatta-ttggtaaacgatttggtaaacttacctaat 15690773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 405
Target Start/End: Complemental strand, 17431961 - 17431884
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttg 405  Q
    ||||| |||||||||||||||| |||||| ||| | |||||  ||  ||||||||||||||| ||||| ||| |||||    
T  17431961 ttggatgaaacgacaatctctgtggatacgatactctactttccactttattacttggtaaacgatttagtacacttg 17431884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 410
Target Start/End: Original strand, 23380303 - 23380360
Alignment:
Q  353 atacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaa 410  Q
    |||| ||| |||||||||||  |||||||||||||||  |||||||| ||||||||||    
T  23380303 atacgatagtttacttatcagtttattacttggtaaacaatttggtacacttgcctaa 23380360  T

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Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 375 - 411
Target Start/End: Complemental strand, 15469967 - 15469931
Alignment:
Q  375 ttattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||||||||||||| ||||||||| |||||||||||    
T  15469967 ttattacttggtaaacgatttggtacacttgcctaat 15469931  T

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Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 411
Target Start/End: Original strand, 17171577 - 17171657
Alignment:
Q  331 gacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||||||||||  || |||||| ||  | |||||||||  |||||||||| |||| ||||||||| |||| ||||||    
T  17171577 gacgaaacgacaatccatgtggatacgatgctctacttatcactttattacttgataaaagatttggtacacttacctaat 17171657  T

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Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 334 - 410
Target Start/End: Complemental strand, 17185535 - 17185459
Alignment:
Q  334 gaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaa 410  Q
    |||||||||||| |||  ||||| ||| | |||||||||  |||||| |||||||||||||| ||| ||||| ||||    
T  17185535 gaaacgacaatccctgtagatacgatactctacttatcactttattatttggtaaatgatttagtacacttgtctaa 17185459  T

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Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 375 - 407
Target Start/End: Original strand, 20744879 - 20744911
Alignment:
Q  375 ttattacttggtaaatgatttggtaaacttgcc 407  Q
    ||||||||||||||||||||||||| |||||||    
T  20744879 ttattacttggtaaatgatttggtacacttgcc 20744911  T

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Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 334 - 411
Target Start/End: Original strand, 168326 - 168402
Alignment:
Q  334 gaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||||||| ||| |||||| ||| | |||||||||  ||||||||||||||| ||||||||| |||||||||||    
T  168326 gaaacgacaatc-ctgtggatacgatactctacttatcactttattacttggtaaacgatttggtacacttgcctaat 168402  T

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Target: scaffold0650 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 411
Target Start/End: Complemental strand, 6365 - 6282
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    ||||||||||| ||||||  || |||||| ||| ||||||||| |  ||||||||| ||||| |||||| || |||||||||||    
T  6365 ttggacgaaacaacaatccatgtggatacgatactttacttatgactttattacttcgtaaacgatttgatacacttgcctaat 6282  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 410
Target Start/End: Complemental strand, 12162 - 12105
Alignment:
Q  353 atacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaa 410  Q
    |||| ||| |||||||||||  |||||||||||||||  |||||||| ||||||||||    
T  12162 atacgatagtttacttatcagtttattacttggtaaacaatttggtacacttgcctaa 12105  T

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Target: scaffold0638 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 388
Target Start/End: Original strand, 844 - 904
Alignment:
Q  328 ttggacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaa 388  Q
    ||||||||||||||||||||   |||||| ||| | |||||||||  ||||||||||||||    
T  844 ttggacgaaacgacaatctcaatggatacgatactctacttatcactttattacttggtaa 904  T

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Target: scaffold0136 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 375 - 411
Target Start/End: Original strand, 15533 - 15569
Alignment:
Q  375 ttattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||||||||||||||||| || |||||||||||    
T  15533 ttattacttggtaaatgatttgatacacttgcctaat 15569  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 411
Target Start/End: Complemental strand, 81561 - 81482
Alignment:
Q  331 gacgaaacgacaatctctgcggatacaatattttacttatcatattattacttggtaaatgatttggtaaacttgcctaat 411  Q
    |||||||| ||||||  || ||||||||||  | ||||||||  |||||| |||||||| ||||| |||||||||||||||    
T  81561 gacgaaaccacaatccatgtggatacaatacct-acttatcactttattatttggtaaacgatttcgtaaacttgcctaat 81482  T

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