View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14037_high_27 (Length: 220)
Name: NF14037_high_27
Description: NF14037
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14037_high_27 |
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Alignment Details
Target: chr4 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 30715328 - 30715123
Alignment:
| Q |
1 |
tctttgtattcttcttataacttgtgttttggaattctattatgatgtttgggcttttgggcagtggcaggataatatgaagcagattcagataaagatt |
100 |
Q |
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| T |
30715328 |
tctttgtattcttctgataacttttgttttggaattctattatgatgtttgggcttttgggcagtggcaggataatatgaagcagattcagatgaagatt |
30715229 |
T |
|
| Q |
101 |
gacggtgtgtccaagtcatgtttgatttgctttaatttgttctcaacaactttgtatgttataatcttaagataatctcttctcttctaagggtgcagtt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
30715228 |
gacggtgtgtccaagtcatgtttgatttgctttaatttgttctcaacagctttgtatgttgtaatcttaagataatctcttctcttctaagggtgcagtt |
30715129 |
T |
|
| Q |
201 |
gttggt |
206 |
Q |
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|||||| |
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| T |
30715128 |
gttggt |
30715123 |
T |
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