View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14037_high_6 (Length: 496)

Name: NF14037_high_6
Description: NF14037
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14037_high_6
NF14037_high_6
[»] chr3 (16 HSPs)
chr3 (16-480)||(50550027-50550490)
chr3 (420-479)||(51046099-51046158)
chr3 (417-480)||(33689228-33689291)
chr3 (420-480)||(30476500-30476560)
chr3 (420-477)||(30580782-30580839)
chr3 (420-480)||(47492073-47492133)
chr3 (420-480)||(47677281-47677341)
chr3 (420-480)||(1801472-1801532)
chr3 (417-480)||(43139732-43139795)
chr3 (422-480)||(30904296-30904354)
chr3 (417-479)||(49418714-49418776)
chr3 (422-475)||(30734430-30734483)
chr3 (432-480)||(29031752-29031800)
chr3 (422-453)||(50524730-50524761)
chr3 (432-471)||(55223293-55223332)
chr3 (417-453)||(47677334-47677370)
[»] chr5 (15 HSPs)
chr5 (417-480)||(3180083-3180146)
chr5 (420-480)||(3899891-3899951)
chr5 (420-480)||(16971196-16971256)
chr5 (420-480)||(30117854-30117914)
chr5 (417-480)||(16439190-16439253)
chr5 (420-480)||(2953242-2953302)
chr5 (420-480)||(29699419-29699479)
chr5 (417-480)||(19598384-19598446)
chr5 (420-480)||(291149-291209)
chr5 (420-480)||(19655210-19655270)
chr5 (420-479)||(2093963-2094022)
chr5 (421-474)||(16802502-16802555)
chr5 (420-480)||(28818969-28819029)
chr5 (426-480)||(38134405-38134459)
chr5 (420-479)||(2356327-2356383)
[»] chr7 (12 HSPs)
chr7 (420-480)||(11016921-11016981)
chr7 (420-480)||(15027594-15027654)
chr7 (420-480)||(38975857-38975917)
chr7 (420-480)||(48000789-48000849)
chr7 (417-480)||(41018251-41018314)
chr7 (420-480)||(4290597-4290657)
chr7 (417-480)||(7671934-7671997)
chr7 (417-480)||(27028816-27028879)
chr7 (420-480)||(29053340-29053400)
chr7 (420-480)||(42628347-42628407)
chr7 (417-480)||(45231877-45231936)
chr7 (420-469)||(48000720-48000769)
[»] chr4 (25 HSPs)
chr4 (420-480)||(51265497-51265557)
chr4 (417-474)||(31430484-31430541)
chr4 (420-480)||(23444295-23444355)
chr4 (420-480)||(47661894-47661954)
chr4 (417-480)||(50384128-50384191)
chr4 (420-480)||(6271754-6271814)
chr4 (420-480)||(42375062-42375122)
chr4 (417-480)||(52028601-52028664)
chr4 (417-479)||(28693946-28694008)
chr4 (417-480)||(47404608-47404671)
chr4 (408-449)||(17285813-17285854)
chr4 (420-480)||(40789231-40789291)
chr4 (432-480)||(45591448-45591496)
chr4 (408-447)||(6607500-6607539)
chr4 (417-480)||(24006093-24006156)
chr4 (420-475)||(35682223-35682278)
chr4 (421-480)||(55090023-55090082)
chr4 (422-480)||(25818401-25818459)
chr4 (415-480)||(26186037-26186100)
chr4 (408-448)||(9712956-9712996)
chr4 (420-480)||(47762660-47762720)
chr4 (420-480)||(53954662-53954722)
chr4 (443-480)||(30861823-30861860)
chr4 (411-480)||(31532706-31532775)
chr4 (420-480)||(44379982-44380042)
[»] chr1 (27 HSPs)
chr1 (417-480)||(34062261-34062324)
chr1 (420-480)||(48993943-48994003)
chr1 (421-480)||(17127591-17127650)
chr1 (417-478)||(1819512-1819573)
chr1 (420-480)||(741528-741588)
chr1 (420-480)||(5995421-5995481)
chr1 (420-480)||(29179623-29179683)
chr1 (417-480)||(37155098-37155161)
chr1 (408-480)||(44706797-44706870)
chr1 (420-480)||(8337877-8337937)
chr1 (420-480)||(29371420-29371480)
chr1 (420-480)||(32540774-32540834)
chr1 (417-480)||(4609048-4609111)
chr1 (417-480)||(46333969-46334032)
chr1 (420-479)||(47303448-47303507)
chr1 (420-480)||(15220863-15220923)
chr1 (420-480)||(33219625-33219685)
chr1 (420-480)||(48498467-48498527)
chr1 (420-480)||(48604973-48605033)
chr1 (417-480)||(9157362-9157425)
chr1 (420-474)||(28928805-28928859)
chr1 (407-448)||(36774823-36774864)
chr1 (423-480)||(45728339-45728396)
chr1 (432-480)||(1091582-1091630)
chr1 (417-480)||(38674528-38674589)
chr1 (417-453)||(8337930-8337966)
chr1 (417-465)||(19711203-19711251)
[»] chr8 (15 HSPs)
chr8 (420-480)||(5033213-5033273)
chr8 (420-480)||(35440995-35441055)
chr8 (420-479)||(10086810-10086869)
chr8 (417-480)||(34541826-34541889)
chr8 (420-480)||(8796474-8796534)
chr8 (420-480)||(33841617-33841677)
chr8 (421-480)||(8243415-8243474)
chr8 (420-480)||(45191153-45191213)
chr8 (420-471)||(31159912-31159963)
chr8 (420-479)||(34229694-34229753)
chr8 (420-480)||(5667149-5667209)
chr8 (420-480)||(39851007-39851067)
chr8 (432-479)||(6296658-6296705)
chr8 (421-479)||(4958652-4958709)
chr8 (420-469)||(35031640-35031689)
[»] scaffold0481 (1 HSPs)
scaffold0481 (417-480)||(2910-2973)
[»] chr6 (7 HSPs)
chr6 (420-479)||(10521875-10521934)
chr6 (420-480)||(12343152-12343212)
chr6 (420-480)||(24618627-24618687)
chr6 (417-480)||(551188-551251)
chr6 (417-479)||(2315327-2315389)
chr6 (420-480)||(13043509-13043569)
chr6 (448-480)||(31654357-31654389)
[»] chr2 (15 HSPs)
chr2 (420-479)||(16514477-16514536)
chr2 (417-479)||(2828637-2828699)
chr2 (420-480)||(38933639-38933699)
chr2 (421-480)||(6722003-6722062)
chr2 (420-480)||(14229379-14229439)
chr2 (421-480)||(15011332-15011391)
chr2 (421-480)||(37762028-37762087)
chr2 (421-479)||(37961759-37961817)
chr2 (420-480)||(29508716-29508777)
chr2 (420-465)||(32545855-32545900)
chr2 (420-480)||(6217250-6217310)
chr2 (420-480)||(14470618-14470678)
chr2 (417-480)||(2894015-2894078)
chr2 (420-474)||(14892318-14892372)
chr2 (420-480)||(29925596-29925656)
[»] scaffold1033 (1 HSPs)
scaffold1033 (417-483)||(2262-2328)
[»] scaffold1029 (1 HSPs)
scaffold1029 (417-483)||(2262-2328)
[»] scaffold0047 (1 HSPs)
scaffold0047 (417-480)||(63809-63872)
[»] scaffold0016 (1 HSPs)
scaffold0016 (422-480)||(49731-49789)
[»] scaffold0586 (1 HSPs)
scaffold0586 (431-480)||(7084-7133)


Alignment Details
Target: chr3 (Bit Score: 413; Significance: 0; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 413; E-Value: 0
Query Start/End: Original strand, 16 - 480
Target Start/End: Complemental strand, 50550490 - 50550027
Alignment:
Q  16 atatatatttcattgatcacaagtatgcttgtagaaaagcaaaatgacaccttgatagttgagattacccaccacaaaacctgtttcggccatgaagcaa 115  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  50550490 atatacatttcatcgatcacaagtatgcttgtagaaaagcaaaatgacaccttgatagttgagattacccaccacaaaacctgtttcggccgtgaagcaa 50550391  T
Q  116 aggatctttgataatatcttgtacaagcagccaataataatcacaatatgaaatggcaagatagtactgagcttcaattcaactcgacgtcagcgtaaaa 215  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  50550390 aggatctttgataatatcttttacaagcagccaataataatcacaatatgaaatggcaagatagtagtgagcttcaattcaactcgacgtcagcgtaaaa 50550291  T
Q  216 atcatttataatgaaattacgcacccacttaactgatatccaattgccccatcgattaatactacaacactactcaatctagatgttggtatagtttaat 315  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50550290 ataatttataatgaaattacgcacccacttaactgatatccaattgccccatcgattaatactacaacactactcaatctagatgttggtatagtttaat 50550191  T
Q  316 caccactaattcattttattttattaaaccaatgatgacaactttgtttctatttctacaattatcgattgcttattctagctatgaatttggggtagca 415  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| ||    
T  50550190 caccactaattcattttattttattaaaccaatgatgacaactttgtttctatttctaaaattatcgattgcttattctagctatgaattt-gggtacca 50550092  T
Q  416 cttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  50550091 cttgggtgacattgatcaatcataatgtcataatgtttgtgaaagagagagaaacacaagcattg 50550027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 420 - 479
Target Start/End: Original strand, 51046099 - 51046158
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcatt 479  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  51046099 ggtgacattgatcaatcataatgtcacaatgtttgtgaaagagagagaaacacaagcatt 51046158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 417 - 480
Target Start/End: Complemental strand, 33689291 - 33689228
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||||||| ||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  33689291 ttgggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 33689228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 420 - 480
Target Start/End: Original strand, 30476500 - 30476560
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||| ||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  30476500 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 30476560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 420 - 477
Target Start/End: Original strand, 30580782 - 30580839
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagca 477  Q
    ||||| |||||||||||||||||||||||| ||| ||||||||| |||||||||||||    
T  30580782 ggtgatattgaccaatcataatgtcacaatatttgtgaaagagatagaaacacaagca 30580839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 420 - 480
Target Start/End: Original strand, 47492073 - 47492133
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||| ||||||| |||||||||||| || ||||| ||||||||||||||||||||    
T  47492073 ggtgacattggccaatcacaatgtcacaatgcttgtgaaaaagagagaaacacaagcattg 47492133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 420 - 480
Target Start/End: Original strand, 47677281 - 47677341
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||||||| |||| |||||||||||| || |||||||||||||||||||| |||||    
T  47677281 ggtgacattgaccgatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattg 47677341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 420 - 480
Target Start/End: Original strand, 1801472 - 1801532
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||| ||||||| |||| ||||||| || |||||||||||||||||||| |||||    
T  1801472 ggtgacattggccaatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattg 1801532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 417 - 480
Target Start/End: Original strand, 43139732 - 43139795
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||||| |  |||||| ||||||| |||| || ||||||||||||||||||||||||||    
T  43139732 ttgggtgacatcggtcaatcacaatgtcagaatgcttgtgaaagagagagaaacacaagcattg 43139795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 480
Target Start/End: Complemental strand, 30904354 - 30904296
Alignment:
Q  422 tgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||| | |||||| ||| ||||||| ||||| ||||||||||||||||||||||||    
T  30904354 tgacattaatcaatcacaatatcacaatatttataaaagagagagaaacacaagcattg 30904296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 479
Target Start/End: Original strand, 49418714 - 49418776
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcatt 479  Q
    |||||||| ||||  |||||| ||||||| ||| ||| |||||||||||||||||||||||||    
T  49418714 ttgggtgatattggtcaatcacaatgtcataatatttgtgaaagagagagaaacacaagcatt 49418776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 422 - 475
Target Start/End: Original strand, 30734430 - 30734483
Alignment:
Q  422 tgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaag 475  Q
    ||||||||||| |||| |||||||||||| || ||||||| |||||||||||||    
T  30734430 tgacattgaccgatcacaatgtcacaatgcttgtgaaagatagagaaacacaag 30734483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 432 - 480
Target Start/End: Original strand, 29031752 - 29031800
Alignment:
Q  432 caatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||| |||||||||||| || |||||||||||||||||||| |||||    
T  29031752 caatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattg 29031800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 422 - 453
Target Start/End: Original strand, 50524730 - 50524761
Alignment:
Q  422 tgacattgaccaatcataatgtcacaatgttt 453  Q
    ||||||||||||||||||||||||||||||||    
T  50524730 tgacattgaccaatcataatgtcacaatgttt 50524761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 432 - 471
Target Start/End: Complemental strand, 55223332 - 55223293
Alignment:
Q  432 caatcataatgtcacaatgtttatgaaagagagagaaaca 471  Q
    ||||||||||||||||||| || |||||||||||||||||    
T  55223332 caatcataatgtcacaatgcttgtgaaagagagagaaaca 55223293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 453
Target Start/End: Complemental strand, 47677370 - 47677334
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgttt 453  Q
    |||||||||||||| |||||| |||||||||||||||    
T  47677370 ttgggtgacattgatcaatcacaatgtcacaatgttt 47677334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 5e-23; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 417 - 480
Target Start/End: Original strand, 3180083 - 3180146
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3180083 ttgggtgacattgatcaatcataatgtcacaatgtttgtgaaagagagagaaacacaagcattg 3180146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 3899951 - 3899891
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  3899951 ggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 3899891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 16971256 - 16971196
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  16971256 ggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 16971196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 420 - 480
Target Start/End: Original strand, 30117854 - 30117914
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  30117854 ggtgatattgaccaatcacaatgtcacaatgtttatgaaaaagagagaaacacaagcattg 30117914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 417 - 480
Target Start/End: Complemental strand, 16439253 - 16439190
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||||||| |||||| |||||||||||| || ||||||||||||||||||||||||||    
T  16439253 ttgggtgacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 16439190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 2953302 - 2953242
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||| ||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  2953302 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 2953242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 29699479 - 29699419
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||| ||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  29699479 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 29699419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 417 - 480
Target Start/End: Complemental strand, 19598446 - 19598384
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||||| |||||||||||||||| |||| || ||||||||||||||||||||||||||    
T  19598446 ttgggtgacattaaccaatcataatgtca-aatgcttgtgaaagagagagaaacacaagcattg 19598384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 291209 - 291149
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||||| |||||| ||||||||||||||| ||||||||| ||||| ||||||||||    
T  291209 ggtgacattgatcaatcacaatgtcacaatgtttgtgaaagagaaagaaatacaagcattg 291149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 19655270 - 19655210
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||| ||||||| |||||||||||| || |||||||||||||||||||| |||||    
T  19655270 ggtgacattgtccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattg 19655210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 420 - 479
Target Start/End: Original strand, 2093963 - 2094022
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcatt 479  Q
    ||||||||||| |||||| ||||||| |||| || |||||||||||||||||||||||||    
T  2093963 ggtgacattgatcaatcacaatgtcataatgcttgtgaaagagagagaaacacaagcatt 2094022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 421 - 474
Target Start/End: Complemental strand, 16802555 - 16802502
Alignment:
Q  421 gtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaa 474  Q
    ||||||||||||||||| |||||||||||| || | ||||||||||||||||||    
T  16802555 gtgacattgaccaatcagaatgtcacaatgcttgtaaaagagagagaaacacaa 16802502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 28819029 - 28818969
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||||  ||||||||||||||||||| || ||||||||||||||| ||||| ||||    
T  28819029 ggtgacattggtcaatcataatgtcacaatgcttgtgaaagagagagaaatacaagtattg 28818969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 426 - 480
Target Start/End: Original strand, 38134405 - 38134459
Alignment:
Q  426 attgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||| ||||||| |||||||||||| |  ||||||||| ||||||||||||||||    
T  38134405 attggccaatcacaatgtcacaatgctagtgaaagagaaagaaacacaagcattg 38134459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 479
Target Start/End: Complemental strand, 2356383 - 2356327
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcatt 479  Q
    |||||||||| ||||||| | |||||||||| ||||||||||  ||||||||||||||||    
T  2356383 ggtgacattggccaatcaca-tgtcacaatgcttatgaaaga--gagaaacacaagcatt 2356327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 53; Significance: 3e-21; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 11016981 - 11016921
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  11016981 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaagcattg 11016921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 15027654 - 15027594
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||||||||||| |||||||||||| || |||||||||||||||||||| |||||    
T  15027654 ggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattg 15027594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 38975917 - 38975857
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||||| |||| |||||| ||||||| || ||||||||||||||||||||||||||    
T  38975917 ggtgacattgatcaattataatgccacaatgcttgtgaaagagagagaaacacaagcattg 38975857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 48000849 - 48000789
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||||||||||| |||| |||||||| | |||||||||||||||||||| |||||    
T  48000849 ggtgacattgaccaatcacaatgccacaatgtctgtgaaagagagagaaacacaaacattg 48000789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 417 - 480
Target Start/End: Original strand, 41018251 - 41018314
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||||||| ||||||| |||||| ||||| || ||||||||||||||||| ||||||||    
T  41018251 ttgggtgacattggccaatcacaatgtcccaatgcttgtgaaagagagagaaacataagcattg 41018314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 4290657 - 4290597
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||| ||||||| |||||||||||  || |||||||||||||||||| |||||||    
T  4290657 ggtgacattggccaatcacaatgtcacaattcttgtgaaagagagagaaacacgagcattg 4290597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 417 - 480
Target Start/End: Original strand, 7671934 - 7671997
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||||||  ||||||| |||| ||||||| || |||||||||||||||||||| |||||    
T  7671934 ttgggtgacattagccaatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattg 7671997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 417 - 480
Target Start/End: Original strand, 27028816 - 27028879
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||| ||||||  |||||| |||||||||||| || |||||||||||||||||||| |||||    
T  27028816 ttgggtaacattggacaatcacaatgtcacaatgcttctgaaagagagagaaacacaaacattg 27028879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 480
Target Start/End: Original strand, 29053340 - 29053400
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||| ||||||| |||| | ||||| || |||||||||||||||||||| |||||    
T  29053340 ggtgacattggccaatcacaatgcctcaatgcttgtgaaagagagagaaacacaaacattg 29053400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 42628407 - 42628347
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||| |||| ||||||| |||||| ||||| || ||||||||||||||||| ||||||||    
T  42628407 ggtgatattggccaatcacaatgtcccaatgcttgtgaaagagagagaaacataagcattg 42628347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 417 - 480
Target Start/End: Original strand, 45231877 - 45231936
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||||||||||||||| |||| |||    ||| ||||||||||||||||| ||||||||    
T  45231877 ttgggtgacattgaccaatcacaatgccac----tttgtgaaagagagagaaacaaaagcattg 45231936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 469
Target Start/End: Original strand, 48000720 - 48000769
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaa 469  Q
    ||||||||||| |||||| |||| ||||||| || |||||||||||||||    
T  48000720 ggtgacattgatcaatcacaatgccacaatgcttgtgaaagagagagaaa 48000769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 3e-21; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 51265557 - 51265497
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  51265557 ggtgacattgaccaatcataatgtcacaatgcttgtgaaagagagagaaacacaagcattg 51265497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 417 - 474
Target Start/End: Original strand, 31430484 - 31430541
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaa 474  Q
    ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  31430484 ttgggtgacattgaccaatcacaatgtcacaatgcttatgaaagagagagaaacacaa 31430541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 420 - 480
Target Start/End: Original strand, 23444295 - 23444355
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  23444295 ggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 23444355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 47661954 - 47661894
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  47661954 ggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 47661894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 417 - 480
Target Start/End: Original strand, 50384128 - 50384191
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||||||| ||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  50384128 ttgggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 50384191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 6271814 - 6271754
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||| ||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  6271814 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 6271754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 42375122 - 42375062
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||||| |||||| |||||||||||| || ||||||||||||||||||||||||||    
T  42375122 ggtgacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 42375062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 417 - 480
Target Start/End: Complemental strand, 52028664 - 52028601
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||||||| ||||||| |||||||||||| || |||||||||||||||||||| |||||    
T  52028664 ttgggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattg 52028601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 417 - 479
Target Start/End: Original strand, 28693946 - 28694008
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcatt 479  Q
    |||| |||||||||||||||| ||| ||||||||||| |||||||||||||||||||| ||||    
T  28693946 ttggatgacattgaccaatcacaatatcacaatgtttgtgaaagagagagaaacacaaacatt 28694008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 417 - 480
Target Start/End: Original strand, 47404608 - 47404671
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||||||  |||||| |||||||||||| || |||||||||||||||| |||||||||    
T  47404608 ttgggtgacattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacccaagcattg 47404671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 408 - 449
Target Start/End: Complemental strand, 17285854 - 17285813
Alignment:
Q  408 gggtagcacttgggtgacattgaccaatcataatgtcacaat 449  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  17285854 gggtagcacttgggtgacattgaccaatcacaatgtcacaat 17285813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 40789291 - 40789231
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||| |||| ||||||| |||||||||||| || |||||||||||||||||||| |||||    
T  40789291 ggtgatattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattg 40789231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 432 - 480
Target Start/End: Original strand, 45591448 - 45591496
Alignment:
Q  432 caatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||||||||||||| || |||||||||||||||||||| |||||    
T  45591448 caatcataatgtcacaatgcttgtgaaagagagagaaacacaaacattg 45591496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 447
Target Start/End: Complemental strand, 6607539 - 6607500
Alignment:
Q  408 gggtagcacttgggtgacattgaccaatcataatgtcaca 447  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  6607539 gggtagcacttgggtgacattgaccaaccataatgtcaca 6607500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 417 - 480
Target Start/End: Original strand, 24006093 - 24006156
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||||||| ||||||| |||| ||||||| || ||||||||||||||||| || |||||    
T  24006093 ttgggtgacattggccaatcacaatgacacaatgcttgtgaaagagagagaaacataaacattg 24006156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 420 - 475
Target Start/End: Complemental strand, 35682278 - 35682223
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaag 475  Q
    ||||||||||||| |||| |||||||||||| || ||||||| |||||||||||||    
T  35682278 ggtgacattgaccgatcacaatgtcacaatgcttgtgaaagatagagaaacacaag 35682223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 421 - 480
Target Start/End: Original strand, 55090023 - 55090082
Alignment:
Q  421 gtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||  |||||| |||||||||||| || ||||||||||||| ||||||||||||    
T  55090023 gtgacattggtcaatcacaatgtcacaatgcttgtgaaagagagagagacacaagcattg 55090082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 422 - 480
Target Start/End: Original strand, 25818401 - 25818459
Alignment:
Q  422 tgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||  |||||| |||||||||||| || |||||||||||||||||||| |||||    
T  25818401 tgacattggtcaatcacaatgtcacaatgattgtgaaagagagagaaacacaatcattg 25818459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 480
Target Start/End: Original strand, 26186037 - 26186100
Alignment:
Q  415 acttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||||||||  |||||| |||||||||||| || ||||  ||||||||||||||||||||    
T  26186037 acttgggtgacattggtcaatcacaatgtcacaatgcttgtgaa--agagagaaacacaagcattg 26186100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 448
Target Start/End: Complemental strand, 9712996 - 9712956
Alignment:
Q  408 gggtagcacttgggtgacattgaccaatcataatgtcacaa 448  Q
    ||||||||||||||||||||||||||| || ||||||||||    
T  9712996 gggtagcacttgggtgacattgaccaaccacaatgtcacaa 9712956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 47762720 - 47762660
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||||  ||| ||||||||||||||| || ||||||||||||||||| || |||||    
T  47762720 ggtgacattggtcaaccataatgtcacaatgcttgtgaaagagagagaaacataaacattg 47762660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 53954722 - 53954662
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||| ||||| | |||||||||||| || |||||||| ||||||||| |||||||    
T  53954722 ggtgacattgtccaattacaatgtcacaatgcttgtgaaagagtgagaaacactagcattg 53954662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 443 - 480
Target Start/End: Original strand, 30861823 - 30861860
Alignment:
Q  443 tcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||| || ||||||||||||||||||||||||||    
T  30861823 tcacaatgcttgtgaaagagagagaaacacaagcattg 30861860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 480
Target Start/End: Original strand, 31532706 - 31532775
Alignment:
Q  411 tagcacttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||| |||||||||  |||||| ||||||||||| | | | ||||||||||||| |||| |||||    
T  31532706 tagcacttgtgtgacattgttcaatcacaatgtcacaatatatgtaaaagagagagaaatacaaacattg 31532775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 44380042 - 44379982
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||| |||||||||||| ||||| |||||  |||| ||| |||||||||| |||||||||    
T  44380042 ggtgatattgaccaatcacaatgttacaatacttataaaatagagagaaacgcaagcattg 44379982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 1e-20; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 417 - 480
Target Start/End: Complemental strand, 34062324 - 34062261
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||| ||||||||    
T  34062324 ttgggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacataagcattg 34062261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 420 - 480
Target Start/End: Original strand, 48993943 - 48994003
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  48993943 ggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 48994003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 421 - 480
Target Start/End: Original strand, 17127591 - 17127650
Alignment:
Q  421 gtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  17127591 gtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 17127650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 417 - 478
Target Start/End: Original strand, 1819512 - 1819573
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcat 478  Q
    |||||||||||||| |||||| |||||||||||| || ||||||||||||||||||||||||    
T  1819512 ttgggtgacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcat 1819573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 420 - 480
Target Start/End: Original strand, 741528 - 741588
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||| ||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  741528 ggtgacattgcccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 741588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 5995481 - 5995421
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||||||||||| |||| ||||||| || ||||||||||||||||||||||||||    
T  5995481 ggtgacattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcattg 5995421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 420 - 480
Target Start/End: Original strand, 29179623 - 29179683
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||| |||||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  29179623 ggtgacactgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 29179683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 417 - 480
Target Start/End: Complemental strand, 37155161 - 37155098
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||||||| ||||||| |||||||||||  || ||||||||||||||||||||||||||    
T  37155161 ttgggtgacattggccaatcacaatgtcacaatacttgtgaaagagagagaaacacaagcattg 37155098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 408 - 480
Target Start/End: Original strand, 44706797 - 44706870
Alignment:
Q  408 gggtagcacttgggtgacattgaccaatcataa-tgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||| |||||||||||||||| ||||||| || || ||||||| || ||||||||||||||||||||||||||    
T  44706797 gggtaacacttgggtgacattggccaatcacaaatgccacaatgcttgtgaaagagagagaaacacaagcattg 44706870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 420 - 480
Target Start/End: Original strand, 8337877 - 8337937
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||||  |||||| ||||||||||||||| |||||||||||||||||||| |||||    
T  8337877 ggtgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattg 8337937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 29371480 - 29371420
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||| |||||||||||| |||||||||||| || |||||||||||||||||||| |||||    
T  29371480 ggtgatattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattg 29371420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 420 - 480
Target Start/End: Original strand, 32540774 - 32540834
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||| ||||| ||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  32540774 ggtggcattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 32540834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 417 - 480
Target Start/End: Complemental strand, 4609111 - 4609048
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||||||  |||||| |||||||||||| || |||||||||||||||||||| |||||    
T  4609111 ttgggtgacattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattg 4609048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 417 - 480
Target Start/End: Original strand, 46333969 - 46334032
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||| |||||||| ||||||| |||||||||||| || ||||||||||| ||||||||||||||    
T  46333969 ttggatgacattggccaatcacaatgtcacaatgcttgtgaaagagagaaaaacacaagcattg 46334032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 420 - 479
Target Start/End: Complemental strand, 47303507 - 47303448
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcatt 479  Q
    ||||||||||  |||||| ||||||||||||||| |||||||||||||||||||| ||||    
T  47303507 ggtgacattggtcaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacatt 47303448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 15220923 - 15220863
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||| |||| ||||||| ||| |||||||| || ||||||||||||||||||||||||||    
T  15220923 ggtgatattggccaatcacaatctcacaatgcttgtgaaagagagagaaacacaagcattg 15220863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 33219685 - 33219625
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||||| |||||| ||||||| |||| || ||||||||||| ||||||||||||||    
T  33219685 ggtgacattgatcaatcacaatgtcataatgcttgtgaaagagagaaaaacacaagcattg 33219625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 48498527 - 48498467
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||||||||||| ||||| || ||| || |||||||||||||||||||| |||||    
T  48498527 ggtgacattgaccaatcacaatgttaccatgcttgtgaaagagagagaaacacaaacattg 48498467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 420 - 480
Target Start/End: Original strand, 48604973 - 48605033
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||||  |||||| ||||||||||| ||| |||||||||||||||| |||||||||    
T  48604973 ggtgacattggtcaatcacaatgtcacaatatttgtgaaagagagagaaacgcaagcattg 48605033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 417 - 480
Target Start/End: Complemental strand, 9157425 - 9157362
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||| ||||||||| |||||| ||| |||||||| ||  |||||||||||||||||||||||||    
T  9157425 ttggttgacattgatcaatcacaatatcacaatgcttgagaaagagagagaaacacaagcattg 9157362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 420 - 474
Target Start/End: Original strand, 28928805 - 28928859
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaa 474  Q
    |||||||||| ||||||| ||||||||| || || ||||||||||||||||||||    
T  28928805 ggtgacattggccaatcacaatgtcacagtgcttgtgaaagagagagaaacacaa 28928859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 407 - 448
Target Start/End: Original strand, 36774823 - 36774864
Alignment:
Q  407 ggggtagcacttgggtgacattgaccaatcataatgtcacaa 448  Q
    |||||||||||||||||||||||| |||||| ||||||||||    
T  36774823 ggggtagcacttgggtgacattgatcaatcacaatgtcacaa 36774864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 423 - 480
Target Start/End: Complemental strand, 45728396 - 45728339
Alignment:
Q  423 gacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||  |||||| ||||||| |||| || ||||||||||||||||||||||||||    
T  45728396 gacattggtcaatcacaatgtcataatgcttgtgaaagagagagaaacacaagcattg 45728339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 432 - 480
Target Start/End: Original strand, 1091582 - 1091630
Alignment:
Q  432 caatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||| |||||||||||| || |||||||||||||||||||| |||||    
T  1091582 caatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattg 1091630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 417 - 480
Target Start/End: Original strand, 38674528 - 38674589
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||| |||| ||||||| |||||||||||| || ||||  ||||||||||||||||||||    
T  38674528 ttgggtgatattggccaatcacaatgtcacaatgcttgtgaa--agagagaaacacaagcattg 38674589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 453
Target Start/End: Complemental strand, 8337966 - 8337930
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgttt 453  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  8337966 ttgggtgacattgaccaatcacaatgccacaatgttt 8337930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 417 - 465
Target Start/End: Original strand, 19711203 - 19711251
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagaga 465  Q
    ||||||||||||||||||||| ||||| ||||||  | |||||||||||    
T  19711203 ttgggtgacattgaccaatcacaatgttacaatgcatgtgaaagagaga 19711251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 8e-19; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 5033273 - 5033213
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  5033273 ggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 5033213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 420 - 480
Target Start/End: Original strand, 35440995 - 35441055
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  35440995 ggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 35441055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 420 - 479
Target Start/End: Complemental strand, 10086869 - 10086810
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcatt 479  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||    
T  10086869 ggtgacattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacatt 10086810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 417 - 480
Target Start/End: Original strand, 34541826 - 34541889
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||||||| ||||||||||| |||||||| || ||||||||||||||||||||||||||    
T  34541826 ttgggtgacattggccaatcataatatcacaatgcttgtgaaagagagagaaacacaagcattg 34541889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 8796534 - 8796474
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||||||||||| |||||||||||| || ||||||| ||||||||||||||||||    
T  8796534 ggtgacattgaccaatcaaaatgtcacaatgcttgtgaaagatagagaaacacaagcattg 8796474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 420 - 480
Target Start/End: Original strand, 33841617 - 33841677
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||||||||||| | |||||||||| || ||||||||||||||||||||||||||    
T  33841617 ggtgacattgaccaatcacattgtcacaatgcttgtgaaagagagagaaacacaagcattg 33841677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 421 - 480
Target Start/End: Original strand, 8243415 - 8243474
Alignment:
Q  421 gtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||| |||||| |||| ||||||| || ||||||||||||||||||||||||||    
T  8243415 gtgacattgatcaatcacaatgccacaatgcttgtgaaagagagagaaacacaagcattg 8243474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 420 - 480
Target Start/End: Original strand, 45191153 - 45191213
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||||  ||||| |||| ||||||| ||||||||||||||||||||||| |||||    
T  45191153 ggtgacattgattaatcacaatgccacaatgcttatgaaagagagagaaacacaaacattg 45191213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 420 - 471
Target Start/End: Complemental strand, 31159963 - 31159912
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaaca 471  Q
    |||||||||  |||||||||||||||||||| || |||||||||||||||||    
T  31159963 ggtgacattcgccaatcataatgtcacaatgcttgtgaaagagagagaaaca 31159912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 420 - 479
Target Start/End: Complemental strand, 34229753 - 34229694
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcatt 479  Q
    ||||||||||  |||||| ||| |||||||| || |||||||||||||||||||||||||    
T  34229753 ggtgacattggtcaatcacaatatcacaatgcttgtgaaagagagagaaacacaagcatt 34229694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 5667209 - 5667149
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||| ||||| | ||||||| |||| || ||||||||||||||| ||||||||||    
T  5667209 ggtgacattggccaattacaatgtcataatgcttgtgaaagagagagaaatacaagcattg 5667149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 39851067 - 39851007
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||||||||||| ||| | | |||| || |||||||||||||||||||| |||||    
T  39851067 ggtgacattgaccaatcacaatattataatgcttgtgaaagagagagaaacacaaacattg 39851007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 432 - 479
Target Start/End: Complemental strand, 6296705 - 6296658
Alignment:
Q  432 caatcataatgtcacaatgtttatgaaagagagagaaacacaagcatt 479  Q
    |||| |||||||||||||  || |||||||||||||||||||||||||    
T  6296705 caattataatgtcacaatacttgtgaaagagagagaaacacaagcatt 6296658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 421 - 479
Target Start/End: Complemental strand, 4958709 - 4958652
Alignment:
Q  421 gtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcatt 479  Q
    ||||||||||||||||| || ||||||||  || |||||||||||||||||||| ||||    
T  4958709 gtgacattgaccaatcacaa-gtcacaatacttgtgaaagagagagaaacacaaacatt 4958652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 469
Target Start/End: Original strand, 35031640 - 35031689
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaa 469  Q
    ||||||||||| |||||| |||||| ||||| || |||||||||||||||    
T  35031640 ggtgacattgatcaatcacaatgtcgcaatgcttgtgaaagagagagaaa 35031689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 417 - 480
Target Start/End: Original strand, 2910 - 2973
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||| |||||||||||| ||||||||||||||| |||||||||||||||||||| |||||    
T  2910 ttgggtgatattgaccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaaacattg 2973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 3e-18; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 420 - 479
Target Start/End: Original strand, 10521875 - 10521934
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcatt 479  Q
    |||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  10521875 ggtgacattggccaatcacaatgtcacaatgcttatgaaagagagagaaacacaagcatt 10521934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 12343212 - 12343152
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||| ||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  12343212 ggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 12343152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 420 - 480
Target Start/End: Original strand, 24618627 - 24618687
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||||| |||||| ||||||| |||| |||||||||||||||||||||||||||||    
T  24618627 ggtgacattgatcaatcacaatgtcataatgcttatgaaagagagagaaacacaagcattg 24618687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 417 - 480
Target Start/End: Original strand, 551188 - 551251
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||||||  |||||| |||| |||||||||| ||||||||||||||||||||||||||    
T  551188 ttgggtgacattggtcaatcacaatgccacaatgtttgtgaaagagagagaaacacaagcattg 551251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 417 - 479
Target Start/End: Original strand, 2315327 - 2315389
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcatt 479  Q
    |||||||||||||| |||||| ||||||||||||||| |||||||||| |||||| |||||||    
T  2315327 ttgggtgacattgatcaatcacaatgtcacaatgtttgtgaaagagagcgaaacataagcatt 2315389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 13043569 - 13043509
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||| | ||||| ||| |||||||| || ||||||||||||||||||||||||||    
T  13043569 ggtgacattggctaatcacaatatcacaatgcttgtgaaagagagagaaacacaagcattg 13043509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 448 - 480
Target Start/End: Complemental strand, 31654389 - 31654357
Alignment:
Q  448 atgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||| ||||||||||||||||||||||||||    
T  31654389 atgtttgtgaaagagagagaaacacaagcattg 31654357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 15)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 420 - 479
Target Start/End: Complemental strand, 16514536 - 16514477
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcatt 479  Q
    |||||||||||||||||| |||||||||||| || |||||||||||||||||||||||||    
T  16514536 ggtgacattgaccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcatt 16514477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 417 - 479
Target Start/End: Complemental strand, 2828699 - 2828637
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcatt 479  Q
    ||||||||||||| ||||||| |||||||||||| || |||||||||||||||||||||||||    
T  2828699 ttgggtgacattggccaatcacaatgtcacaatgcttctgaaagagagagaaacacaagcatt 2828637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 420 - 480
Target Start/End: Complemental strand, 38933699 - 38933639
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||| ||| |||||||||||||||||||| || ||||||||||||||||||||||||||    
T  38933699 ggtgacgttggccaatcataatgtcacaatgcttgtgaaagagagagaaacacaagcattg 38933639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 421 - 480
Target Start/End: Complemental strand, 6722062 - 6722003
Alignment:
Q  421 gtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||| |||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  6722062 gtgatattggccaatcacaatgtcacaatgtttgtgaaagagagagaaacacaagcattg 6722003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 420 - 480
Target Start/End: Original strand, 14229379 - 14229439
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||||  |||||| |||||||||||| || ||||||||||||||||||||||||||    
T  14229379 ggtgacattggtcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 14229439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 421 - 480
Target Start/End: Complemental strand, 15011391 - 15011332
Alignment:
Q  421 gtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||| ||||||| |||||||||||| || |||||||||||||||||||| |||||    
T  15011391 gtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattg 15011332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 421 - 480
Target Start/End: Original strand, 37762028 - 37762087
Alignment:
Q  421 gtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||||||||||| |||||| ||||| || ||||||||| ||||||||||||||||    
T  37762028 gtgacattgaccaatcacaatgtcgcaatgcttgtgaaagagaaagaaacacaagcattg 37762087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 421 - 479
Target Start/End: Complemental strand, 37961817 - 37961759
Alignment:
Q  421 gtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcatt 479  Q
    ||||||||||||||||| |||| ||||||| || |||||||||||||||||||| ||||    
T  37961817 gtgacattgaccaatcacaatgccacaatgcttgtgaaagagagagaaacacaaacatt 37961759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 420 - 480
Target Start/End: Original strand, 29508716 - 29508777
Alignment:
Q  420 ggtgacattgaccaatcataa-tgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||||||||||| || || ||||||| || ||||||||||||||||||||||||||    
T  29508716 ggtgacattgaccaatcacaaatgccacaatgcttgtgaaagagagagaaacacaagcattg 29508777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 420 - 465
Target Start/End: Complemental strand, 32545900 - 32545855
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagaga 465  Q
    |||||||||| |||||||||||||||||||| ||||||||||||||    
T  32545900 ggtgacattggccaatcataatgtcacaatgcttatgaaagagaga 32545855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 420 - 480
Target Start/End: Original strand, 6217250 - 6217310
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||| ||||||| |||| ||||||| || |||||||||||||||||||| |||||    
T  6217250 ggtgacattggccaatcacaatgccacaatgcttgtgaaagagagagaaacacaaacattg 6217310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 420 - 480
Target Start/End: Original strand, 14470618 - 14470678
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||||||||||| |||||  ||||| || |||||||||||||||||||| |||||    
T  14470618 ggtgacattgaccaatcacaatgttgcaatgcttgtgaaagagagagaaacacaaacattg 14470678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 480
Target Start/End: Complemental strand, 2894078 - 2894015
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||| ||||||||  |||||| | |||||||||| || ||||||||||||||| ||||||||||    
T  2894078 ttggatgacattggtcaatcacagtgtcacaatgcttgtgaaagagagagaaatacaagcattg 2894015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 420 - 474
Target Start/End: Complemental strand, 14892372 - 14892318
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaa 474  Q
    ||||||||||| |||||| ||||| |||||  |||||||||||||||||| ||||    
T  14892372 ggtgacattgatcaatcacaatgttacaatacttatgaaagagagagaaagacaa 14892318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 420 - 480
Target Start/End: Original strand, 29925596 - 29925656
Alignment:
Q  420 ggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||| ||  ||| ||||||| |||| || |||||||||||||||||||| |||||    
T  29925596 ggtgacattggcccctcacaatgtcagaatgcttgtgaaagagagagaaacacaaacattg 29925656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1033 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1033
Description:

Target: scaffold1033; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 417 - 483
Target Start/End: Complemental strand, 2328 - 2262
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattgatg 483  Q
    ||||| |||||||| |||||| |||||||||||| || |||||||||||||||||||||||||||||    
T  2328 ttgggcgacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgatg 2262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1029 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold1029
Description:

Target: scaffold1029; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 417 - 483
Target Start/End: Complemental strand, 2328 - 2262
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattgatg 483  Q
    ||||| |||||||| |||||| |||||||||||| || |||||||||||||||||||||||||||||    
T  2328 ttgggcgacattgatcaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattgatg 2262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 44; Significance: 8e-16; HSPs: 1)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 417 - 480
Target Start/End: Complemental strand, 63872 - 63809
Alignment:
Q  417 ttgggtgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||||||||| ||||||| |||||||||||| || |||||||||||||||||||| |||||    
T  63872 ttgggtgacattggccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaaacattg 63809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 422 - 480
Target Start/End: Original strand, 49731 - 49789
Alignment:
Q  422 tgacattgaccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    |||||||||||||||| |||||||||||| || ||||||| ||||||||||||||||||    
T  49731 tgacattgaccaatcacaatgtcacaatgcttgtgaaagaaagagaaacacaagcattg 49789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 431 - 480
Target Start/End: Original strand, 7084 - 7133
Alignment:
Q  431 ccaatcataatgtcacaatgtttatgaaagagagagaaacacaagcattg 480  Q
    ||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  7084 ccaatcacaatgtcacaatgcttgtgaaagagagagaaacacaagcattg 7133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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