View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14037_high_8 (Length: 381)
Name: NF14037_high_8
Description: NF14037
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14037_high_8 |
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Alignment Details
Target: chr7 (Bit Score: 332; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 18 - 374
Target Start/End: Original strand, 41456310 - 41456662
Alignment:
| Q |
18 |
gcaaattaagacaaattaatcactccataattaacggtagaaactgagttgttttcaacctgattggcagcgcatggaagagtctacacagaaaaatgat |
117 |
Q |
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| T |
41456310 |
gcaaattaagacaaattaatcactccataattaacggtagaaactgagttgttttcaacctgattggcagcgcatggaagagtctacacagaaaaatgat |
41456409 |
T |
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| Q |
118 |
cgtatacattccattaccaacacgcaccaatatatatggccaatattgaaccaccacgtaccatgcatccatgttgattattcaagctatgcagcctata |
217 |
Q |
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| T |
41456410 |
cgtatacattccattaccaacacgcaccaatat----ggccaatattgaaccaccacgtaccatgcatccatgttgattattcaagctatgcagcctata |
41456505 |
T |
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| Q |
218 |
aataccatcacacatttgaacgagaaatcgcatcatacacaaaacaaaattaatacctcactcacaaccattcatcaaattaagaaaaccagctatatga |
317 |
Q |
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| T |
41456506 |
aataccatcacacatttgaacgagaaatcgcatcatacacaaaacaaaattaatacctcactcacaaccattcatcaaattaagaaaaccagctatatga |
41456605 |
T |
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| Q |
318 |
atcccataatgaatacccaatttgctctttgtattattttggcattctccttctgtg |
374 |
Q |
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| T |
41456606 |
atcctataatgaatacccaatttgctctttgcattattttggcattctccttctgtg |
41456662 |
T |
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