View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14037_high_9 (Length: 360)
Name: NF14037_high_9
Description: NF14037
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14037_high_9 |
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Alignment Details
Target: chr2 (Bit Score: 253; Significance: 1e-140; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 17 - 348
Target Start/End: Complemental strand, 8015048 - 8014716
Alignment:
| Q |
17 |
agtccttaaacccataaaaatatcccaccttcaggctgttaaattgatcacttttatacatccgagtctacctttttcggaccatatctgaatcatcgga |
116 |
Q |
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| T |
8015048 |
agtccttaaacccataaaaatatcccaccttcaggcggttaaattgatcacttttatacatctgagtctacctttttcggaccatatctgaatcatcaga |
8014949 |
T |
|
| Q |
117 |
aacaccgatctcatcaaactttaacttgatgtcattgtgcaacttcttcccccaaaaactcatgagagttggagacaaaattgctaccattaatagcaac |
216 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||| |
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| T |
8014948 |
aacaccgatctcatcaaactttaacttgatgttattgtgcaacttcttcccccaaaaactcatgagaatcagagacaaaattgttaccattaatagcaac |
8014849 |
T |
|
| Q |
217 |
ccttgtatgagagtatgctactcctctggcacaaccaagttattctcagaagatttttgtatgctactc-ctctgacccttgttgctagaatctttggac |
315 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||| ||||||| |
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| T |
8014848 |
ccttgtatgagagtatgctactcctctggcacaaccaagttattctcagaagatttttgtaacagaagcaaaatgacccttgttgctagaatatttggac |
8014749 |
T |
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| Q |
316 |
aacaacatcatgcacttagcaacctcttcttgt |
348 |
Q |
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||||||||||||||||||||||||||||||||| |
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| T |
8014748 |
aacaacatcatgcacttagcaacctcttcttgt |
8014716 |
T |
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