View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14038_high_23 (Length: 346)

Name: NF14038_high_23
Description: NF14038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14038_high_23
NF14038_high_23
[»] chr7 (43 HSPs)
chr7 (179-321)||(27729375-27729519)
chr7 (126-222)||(6783044-6783140)
chr7 (1-67)||(36730484-36730550)
chr7 (128-237)||(34748786-34748895)
chr7 (126-222)||(39808599-39808695)
chr7 (128-231)||(34914913-34915016)
chr7 (128-222)||(43384282-43384376)
chr7 (126-222)||(23396615-23396711)
chr7 (128-231)||(27585264-27585367)
chr7 (128-231)||(36270463-36270566)
chr7 (135-222)||(39808466-39808553)
chr7 (179-221)||(23821363-23821405)
chr7 (196-230)||(36270691-36270725)
chr7 (134-219)||(31374779-31374864)
chr7 (128-237)||(37756152-37756260)
chr7 (126-206)||(6782832-6782912)
chr7 (126-222)||(29252582-29252678)
chr7 (126-222)||(35866641-35866737)
chr7 (196-231)||(33909213-33909248)
chr7 (196-231)||(36495742-36495777)
chr7 (196-231)||(47346087-47346122)
chr7 (196-231)||(47346316-47346351)
chr7 (128-222)||(257269-257363)
chr7 (128-222)||(1661193-1661287)
chr7 (128-222)||(7135245-7135339)
chr7 (185-223)||(32000882-32000920)
chr7 (196-238)||(44314300-44314342)
chr7 (185-222)||(1663606-1663643)
chr7 (126-219)||(9378799-9378892)
chr7 (196-233)||(24240185-24240222)
chr7 (185-222)||(36092394-36092431)
chr7 (128-237)||(37530910-37531019)
chr7 (128-237)||(37755926-37756034)
chr7 (128-237)||(37761900-37762008)
chr7 (185-222)||(40703413-40703450)
chr7 (185-222)||(40703654-40703691)
chr7 (185-222)||(41670898-41670935)
chr7 (170-218)||(4454791-4454839)
chr7 (126-162)||(6214297-6214333)
chr7 (201-233)||(14991500-14991532)
chr7 (201-233)||(15421111-15421143)
chr7 (179-219)||(23396873-23396913)
chr7 (185-221)||(48116299-48116335)
[»] chr5 (41 HSPs)
chr5 (125-222)||(37656734-37656831)
chr5 (126-222)||(48106-48202)
chr5 (126-222)||(28358037-28358133)
chr5 (125-222)||(37781846-37781943)
chr5 (126-222)||(35526990-35527086)
chr5 (126-222)||(38376737-38376833)
chr5 (126-219)||(2908567-2908660)
chr5 (133-222)||(3762919-3763008)
chr5 (126-222)||(34457102-34457198)
chr5 (126-222)||(34457309-34457405)
chr5 (128-237)||(84021-84130)
chr5 (126-222)||(2908771-2908867)
chr5 (126-222)||(11632437-11632533)
chr5 (126-222)||(13413590-13413686)
chr5 (126-222)||(40169043-40169139)
chr5 (196-231)||(22196319-22196354)
chr5 (128-227)||(22196550-22196649)
chr5 (128-222)||(38131772-38131866)
chr5 (141-222)||(48313-48394)
chr5 (134-219)||(24125076-24125161)
chr5 (126-222)||(35527276-35527373)
chr5 (196-231)||(5095894-5095929)
chr5 (136-219)||(15287069-15287152)
chr5 (128-219)||(15510509-15510600)
chr5 (196-231)||(29396336-29396371)
chr5 (125-219)||(20720555-20720649)
chr5 (185-231)||(33040535-33040581)
chr5 (128-222)||(37995636-37995730)
chr5 (196-237)||(83798-83839)
chr5 (185-222)||(1892092-1892129)
chr5 (185-222)||(12965248-12965285)
chr5 (185-222)||(13843762-13843799)
chr5 (185-222)||(24918226-24918263)
chr5 (185-222)||(24994134-24994171)
chr5 (185-222)||(29432477-29432514)
chr5 (169-222)||(30770066-30770119)
chr5 (185-222)||(38663312-38663349)
chr5 (133-222)||(40168861-40168950)
chr5 (126-207)||(43490273-43490354)
chr5 (174-222)||(30758316-30758364)
chr5 (196-224)||(30769868-30769896)
[»] chr8 (31 HSPs)
chr8 (126-222)||(10989243-10989339)
chr8 (125-222)||(43599316-43599413)
chr8 (126-222)||(8559587-8559683)
chr8 (126-218)||(15011035-15011127)
chr8 (126-222)||(16454637-16454733)
chr8 (126-219)||(35561672-35561765)
chr8 (133-222)||(40902395-40902484)
chr8 (126-222)||(10989036-10989132)
chr8 (126-222)||(15010823-15010919)
chr8 (126-222)||(20760662-20760758)
chr8 (127-219)||(42228778-42228870)
chr8 (170-222)||(7729956-7730008)
chr8 (128-231)||(17607207-17607310)
chr8 (196-231)||(35908754-35908789)
chr8 (128-222)||(32931409-32931503)
chr8 (128-225)||(14019816-14019913)
chr8 (128-233)||(15711504-15711609)
chr8 (125-222)||(30176466-30176563)
chr8 (134-222)||(3183913-3184001)
chr8 (185-224)||(36993947-36993986)
chr8 (128-222)||(18905864-18905958)
chr8 (196-238)||(20232393-20232435)
chr8 (199-233)||(38287955-38287989)
chr8 (133-210)||(4195964-4196041)
chr8 (179-224)||(13655174-13655219)
chr8 (179-224)||(13713816-13713861)
chr8 (185-222)||(21653869-21653906)
chr8 (185-222)||(34248142-34248179)
chr8 (185-222)||(34248424-34248461)
chr8 (185-222)||(36997231-36997268)
chr8 (185-221)||(21653392-21653428)
[»] chr6 (21 HSPs)
chr6 (126-222)||(15101113-15101209)
chr6 (126-222)||(16877012-16877108)
chr6 (127-219)||(5269278-5269370)
chr6 (126-222)||(16876832-16876928)
chr6 (132-231)||(8427562-8427661)
chr6 (133-222)||(11313384-11313473)
chr6 (129-222)||(24558797-24558890)
chr6 (126-206)||(6623443-6623523)
chr6 (126-222)||(24558589-24558685)
chr6 (126-219)||(16590190-16590283)
chr6 (126-219)||(16605097-16605190)
chr6 (133-222)||(28149806-28149895)
chr6 (179-231)||(25184269-25184321)
chr6 (179-222)||(17147907-17147950)
chr6 (128-222)||(8144025-8144119)
chr6 (173-219)||(30505525-30505571)
chr6 (185-222)||(1744844-1744881)
chr6 (185-222)||(10418340-10418377)
chr6 (185-222)||(10733440-10733477)
chr6 (185-222)||(24055111-24055148)
chr6 (196-237)||(26339833-26339874)
[»] chr4 (40 HSPs)
chr4 (126-222)||(12016685-12016781)
chr4 (126-222)||(12016893-12016989)
chr4 (126-222)||(43943679-43943775)
chr4 (125-224)||(39110722-39110821)
chr4 (126-224)||(5488373-5488471)
chr4 (126-220)||(25753609-25753703)
chr4 (128-237)||(46528910-46529019)
chr4 (126-222)||(21498537-21498633)
chr4 (130-222)||(23018480-23018572)
chr4 (127-222)||(27634328-27634423)
chr4 (126-221)||(49380883-49380978)
chr4 (196-230)||(33912119-33912153)
chr4 (133-222)||(29113462-29113551)
chr4 (128-224)||(15665161-15665257)
chr4 (170-222)||(17222669-17222721)
chr4 (126-222)||(28395184-28395279)
chr4 (125-217)||(39110912-39111004)
chr4 (128-231)||(11290177-11290280)
chr4 (171-222)||(27634533-27634584)
chr4 (128-222)||(990555-990649)
chr4 (172-222)||(2220985-2221035)
chr4 (128-222)||(29669365-29669459)
chr4 (128-222)||(51469489-51469583)
chr4 (128-222)||(53740190-53740284)
chr4 (185-222)||(21497685-21497722)
chr4 (185-222)||(21498252-21498289)
chr4 (196-237)||(26941937-26941978)
chr4 (185-222)||(36558468-36558505)
chr4 (185-222)||(41176771-41176808)
chr4 (185-222)||(43972420-43972457)
chr4 (185-222)||(45427254-45427291)
chr4 (185-222)||(50858077-50858114)
chr4 (128-237)||(50868000-50868109)
chr4 (185-222)||(51470548-51470585)
chr4 (185-222)||(52214680-52214717)
chr4 (170-222)||(27634098-27634150)
chr4 (185-221)||(28496508-28496544)
chr4 (170-222)||(31254424-31254476)
chr4 (126-222)||(52827234-52827330)
chr4 (126-206)||(53559323-53559403)
[»] chr3 (45 HSPs)
chr3 (126-222)||(9264295-9264391)
chr3 (126-222)||(50692329-50692425)
chr3 (126-222)||(4191124-4191220)
chr3 (126-222)||(9264088-9264184)
chr3 (126-222)||(22339747-22339843)
chr3 (126-222)||(39078773-39078869)
chr3 (125-221)||(39956677-39956773)
chr3 (126-222)||(49477540-49477636)
chr3 (126-222)||(50692532-50692628)
chr3 (127-222)||(21832201-21832296)
chr3 (127-222)||(51642637-51642732)
chr3 (126-222)||(9264502-9264598)
chr3 (126-222)||(22407650-22407746)
chr3 (126-221)||(42258916-42259011)
chr3 (127-221)||(37223582-37223676)
chr3 (126-224)||(51338441-51338539)
chr3 (136-221)||(10453706-10453791)
chr3 (196-237)||(10856613-10856654)
chr3 (125-222)||(21832693-21832790)
chr3 (126-219)||(54591470-54591563)
chr3 (126-222)||(4029646-4029742)
chr3 (126-222)||(37058773-37058869)
chr3 (126-222)||(51642430-51642526)
chr3 (127-222)||(22407443-22407538)
chr3 (128-238)||(15820591-15820701)
chr3 (128-233)||(9180376-9180481)
chr3 (128-229)||(11244536-11244637)
chr3 (196-233)||(16051526-16051563)
chr3 (128-237)||(48511626-48511735)
chr3 (126-222)||(39956469-39956565)
chr3 (126-218)||(53640178-53640270)
chr3 (126-210)||(54495537-54495621)
chr3 (128-231)||(10450641-10450744)
chr3 (133-224)||(11414377-11414467)
chr3 (179-222)||(49477386-49477429)
chr3 (199-233)||(16045361-16045395)
chr3 (199-233)||(16060876-16060910)
chr3 (185-222)||(3985838-3985875)
chr3 (179-224)||(19820528-19820573)
chr3 (196-241)||(40769895-40769940)
chr3 (185-222)||(44573704-44573741)
chr3 (185-222)||(44574001-44574038)
chr3 (185-222)||(51338405-51338442)
chr3 (196-233)||(53966329-53966366)
chr3 (126-222)||(34992583-34992679)
[»] chr2 (39 HSPs)
chr2 (126-222)||(20998991-20999087)
chr2 (126-222)||(34775363-34775459)
chr2 (126-219)||(16006983-16007076)
chr2 (126-222)||(33985773-33985867)
chr2 (126-218)||(883607-883699)
chr2 (126-222)||(883856-883952)
chr2 (126-222)||(12431904-12432000)
chr2 (126-222)||(17727410-17727506)
chr2 (126-222)||(19860043-19860139)
chr2 (126-222)||(25621287-25621383)
chr2 (135-231)||(32810869-32810965)
chr2 (128-231)||(10862051-10862154)
chr2 (128-222)||(3976473-3976567)
chr2 (128-237)||(936820-936929)
chr2 (125-222)||(3435488-3435585)
chr2 (126-222)||(884063-884159)
chr2 (126-222)||(40009980-40010076)
chr2 (196-231)||(17325246-17325281)
chr2 (170-224)||(93735-93789)
chr2 (133-219)||(27545121-27545207)
chr2 (126-219)||(29684017-29684110)
chr2 (133-222)||(33985977-33986066)
chr2 (170-222)||(93140-93192)
chr2 (128-231)||(10862314-10862417)
chr2 (196-231)||(39420773-39420808)
chr2 (171-221)||(18607027-18607077)
chr2 (128-238)||(33532722-33532832)
chr2 (185-222)||(901988-902025)
chr2 (185-222)||(11969117-11969154)
chr2 (185-222)||(21214203-21214240)
chr2 (185-222)||(25286262-25286299)
chr2 (200-237)||(28193562-28193599)
chr2 (185-222)||(42768336-42768373)
chr2 (185-222)||(43195849-43195886)
chr2 (170-218)||(93468-93516)
chr2 (126-206)||(10570941-10571021)
chr2 (125-161)||(13839322-13839358)
chr2 (152-220)||(25441728-25441796)
chr2 (170-222)||(37812515-37812567)
[»] chr1 (29 HSPs)
chr1 (126-222)||(29273227-29273323)
chr1 (126-219)||(43361557-43361650)
chr1 (126-219)||(43361762-43361855)
chr1 (126-222)||(15392031-15392127)
chr1 (134-238)||(38474297-38474401)
chr1 (126-218)||(39649090-39649182)
chr1 (126-218)||(52846855-52846947)
chr1 (128-231)||(17294986-17295089)
chr1 (133-222)||(9381112-9381201)
chr1 (128-221)||(11590428-11590521)
chr1 (133-231)||(29228461-29228559)
chr1 (133-222)||(15391832-15391921)
chr1 (128-221)||(19937046-19937139)
chr1 (179-224)||(29272907-29272952)
chr1 (199-231)||(12287927-12287959)
chr1 (126-218)||(48558327-48558419)
chr1 (128-227)||(51722261-51722361)
chr1 (127-222)||(2997058-2997153)
chr1 (179-222)||(29273068-29273111)
chr1 (128-222)||(4022127-4022221)
chr1 (185-222)||(463085-463122)
chr1 (185-222)||(2104262-2104299)
chr1 (133-222)||(2997263-2997352)
chr1 (185-222)||(11149425-11149462)
chr1 (185-222)||(20735587-20735624)
chr1 (185-222)||(36332177-36332214)
chr1 (185-222)||(36332676-36332713)
chr1 (133-222)||(43423292-43423381)
chr1 (185-221)||(31305776-31305812)
[»] scaffold0054 (1 HSPs)
scaffold0054 (126-224)||(21263-21361)
[»] scaffold0434 (2 HSPs)
scaffold0434 (133-222)||(13319-13408)
scaffold0434 (126-222)||(13519-13615)
[»] scaffold0989 (1 HSPs)
scaffold0989 (126-222)||(2949-3045)
[»] scaffold0029 (1 HSPs)
scaffold0029 (126-222)||(76858-76954)
[»] scaffold0060 (1 HSPs)
scaffold0060 (173-222)||(20593-20642)


Alignment Details
Target: chr7 (Bit Score: 94; Significance: 8e-46; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 27729519 - 27729375
Alignment:
Q  179 caatcatcacctaacacgccggttttgtaaggatgagttaggcctcgatattcatgacacaaacttggacaacttgtttgttgaaccacttgatgaaatc 278  Q
    ||||| |||||  ||| |||| |||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||    
T  27729519 caatcctcaccgtacaagccgattttgtaaggatgagttaggtctcgatattcgtgacacaaacttgaacaacttgtttgttgaaccactcgatgaaatc 27729420  T
Q  279 gcaa--aggtattttctttccttggaagatggcttctaaagtcac 321  Q
    ||||  ||||||||||||||||||||||||||||||||| |||||    
T  27729419 gcaaagaggtattttctttccttggaagatggcttctaaggtcac 27729375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 6783044 - 6783140
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||||||||||||||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  6783044 caagtctcacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 6783140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 36730550 - 36730484
Alignment:
Q  1 atccagcaattgtcaaatgtataatcgttaaagcaagtgatgaacgaggacaacaccacgtaccaaa 67  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||||||| || | |||||||    
T  36730550 atccagcaattgtcaaatgtataaccgttaaagcaagtgatgaaccaggacaacccctcctaccaaa 36730484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 128 - 237
Target Start/End: Original strand, 34748786 - 34748895
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgat 227  Q
    |||| ||||||||||||| | ||||||||||||| || |  |||| || | || || |||||  ||| |||||||||||||||||||||||| |||||||    
T  34748786 agtcccacatcggatagataggattcttgagaagagtttataaagaggaggcattcctcaccgtacaagccggttttgtaaggatgagttagacctcgat 34748885  T
Q  228 attcatgaca 237  Q
    |||| |||||    
T  34748886 attcgtgaca 34748895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 39808695 - 39808599
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||||||||||||||| |||||||||| || |  |||| || | ||||| |||||| ||| ||| ||||||| |||||||||||||||    
T  39808695 caagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccagttttgtgaggatgagttaggcc 39808599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 34915016 - 34914913
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgat 227  Q
    |||| ||||||||||||||| ||||||||||||| || |  ||||  | | || || |||||  ||| |||||||||||| |||||||||||||||||||    
T  34915016 agtcccacatcggatagacaggattcttgagaagagtttacaaagatgaggcactcctcaccgtacaagccggttttgtagggatgagttaggcctcgat 34914917  T
Q  228 attc 231  Q
    ||||    
T  34914916 attc 34914913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 222
Target Start/End: Complemental strand, 43384376 - 43384282
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||| ||||||||||||| | ||||||||||||| || |  |||| || | || || |||||| ||| |||||||||||||||||||||||||||    
T  43384376 agtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggcc 43384282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 23396615 - 23396711
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||| |||||||| |||| |||||||||| || |  ||||  | | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  23396615 caagtcccacaacggatagataagactcttgagaagagtatataaagatgaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 23396711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 27585264 - 27585367
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgat 227  Q
    |||| ||||||||||||| | ||||||||||||| || |  |||  || | || || |||||  ||| ||||||||||||||||||||||||| ||||||    
T  27585264 agtcccacatcggatagataggattcttgagaagagtttataaaaaggaggcactcctcaccgtacaagccggttttgtaaggatgagttaggtctcgat 27585363  T
Q  228 attc 231  Q
    ||||    
T  27585364 attc 27585367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 36270566 - 36270463
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgat 227  Q
    |||| ||||||||||||| | ||||||||||| | || |  |||| || | || || |||||  ||| ||||| ||||||||||||||||||||||||||    
T  36270566 agtcccacatcggatagataggattcttgagacgagtttataaagaggagacactcctcaccgtacaagccggctttgtaaggatgagttaggcctcgat 36270467  T
Q  228 attc 231  Q
    ||||    
T  36270466 attc 36270463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 222
Target Start/End: Complemental strand, 39808553 - 39808466
Alignment:
Q  135 catcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||||||||||||| |||||||||| || |  |||| || | ||||| |||||| | | ||||||||||| |||||||||||||||    
T  39808553 catcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttaaaagccggttttgtgaggatgagttaggcc 39808466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 23821405 - 23821363
Alignment:
Q  179 caatcatcacctaacacgccggttttgtaaggatgagttaggc 221  Q
    |||||||||||| ||| ||||||||||||||||||||||||||    
T  23821405 caatcatcaccttacaagccggttttgtaaggatgagttaggc 23821363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 230
Target Start/End: Complemental strand, 36270725 - 36270691
Alignment:
Q  196 gccggttttgtaaggatgagttaggcctcgatatt 230  Q
    |||||||||||||||||||||||||||||||||||    
T  36270725 gccggttttgtaaggatgagttaggcctcgatatt 36270691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 31374779 - 31374864
Alignment:
Q  134 acatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttag 219  Q
    |||||||||||| |||| | |||||||| || |  |||| || | ||||| |||||| ||| ||||||||||||||||||||||||    
T  31374779 acatcggatagataagactattgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 31374864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 237
Target Start/End: Complemental strand, 37756260 - 37756152
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgat 227  Q
    |||| ||||||||||||| | || |||||||||| || |  |||| || | || || |||||  ||| ||||||||| || |||||||||||||||||||    
T  37756260 agtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcactcttcaccgtacaagccggtttt-tatggatgagttaggcctcgat 37756162  T
Q  228 attcatgaca 237  Q
    ||||||||||    
T  37756161 attcatgaca 37756152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 206
Target Start/End: Original strand, 6782832 - 6782912
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgt 206  Q
    |||||||||||||||||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||    
T  6782832 caagtctcacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgt 6782912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 29252582 - 29252678
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| ||||||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| ||||||||||| | |||||||||||||    
T  29252582 caagtcccacgtcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtgatgatgagttaggcc 29252678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 35866737 - 35866641
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||||||||||||| |||| |||||| ||| || |  | || |||| ||||  ||| || ||| |||||||||||||||||||||||||||    
T  35866737 caagtcccacatcggatagataagactcttgataagagtttatatagagggggcaatactcaacttacaagccggttttgtaaggatgagttaggcc 35866641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 231
Target Start/End: Original strand, 33909213 - 33909248
Alignment:
Q  196 gccggttttgtaaggatgagttaggcctcgatattc 231  Q
    |||||||||||| |||||||||||||||||||||||    
T  33909213 gccggttttgtatggatgagttaggcctcgatattc 33909248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 231
Target Start/End: Original strand, 36495742 - 36495777
Alignment:
Q  196 gccggttttgtaaggatgagttaggcctcgatattc 231  Q
    |||||||||||| |||||||||||||||||||||||    
T  36495742 gccggttttgtagggatgagttaggcctcgatattc 36495777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 231
Target Start/End: Complemental strand, 47346122 - 47346087
Alignment:
Q  196 gccggttttgtaaggatgagttaggcctcgatattc 231  Q
    |||||||||||| |||||||||||||||||||||||    
T  47346122 gccggttttgtacggatgagttaggcctcgatattc 47346087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 231
Target Start/End: Complemental strand, 47346351 - 47346316
Alignment:
Q  196 gccggttttgtaaggatgagttaggcctcgatattc 231  Q
    |||||||||||| |||||||||||||||||||||||    
T  47346351 gccggttttgtacggatgagttaggcctcgatattc 47346316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 222
Target Start/End: Complemental strand, 257363 - 257269
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||| ||||||||||||| |  |||||||||||| || |  |||| || | || || |||||| ||  |||||||||||||||||||||||||||    
T  257363 agtcccacatcggatagatattattcttgagaagagtttataaagaggaggcactcctcaccttactagccggttttgtaaggatgagttaggcc 257269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 222
Target Start/End: Complemental strand, 1661287 - 1661193
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||| ||||||||||||| || | |||||||||| || |  |||| || | || || |||||| ||| |||||||||||||| ||||||||||||    
T  1661287 agtcccacatcggatagataaaactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaagaatgagttaggcc 1661193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 222
Target Start/End: Complemental strand, 7135339 - 7135245
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||| ||||||||||||| | || |||||||||| || |  |||| || | || || |||||| ||| ||||||||||||| |||||||||||||    
T  7135339 agtcacacatcggatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaagatgagttaggcc 7135245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 223
Target Start/End: Original strand, 32000882 - 32000920
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcct 223  Q
    |||||| ||| ||||||||||||||||||||||||||||    
T  32000882 tcaccttacaagccggttttgtaaggatgagttaggcct 32000920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 238
Target Start/End: Complemental strand, 44314342 - 44314300
Alignment:
Q  196 gccggttttgtaaggatgagttaggcctcgatattcatgacac 238  Q
    ||||||||||||  |||||||||||||||||||||||| ||||    
T  44314342 gccggttttgtatagatgagttaggcctcgatattcattacac 44314300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 1663643 - 1663606
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  1663643 tcaccttacaagccggttttgtaaggatgagttaggcc 1663606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 9378799 - 9378892
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttag 219  Q
    |||||| ||||||| ||||| |||| |||||||||| || |  |||| || | ||||| |  ||| ||| ||||||||||||||||||||||||    
T  9378799 caagtcccacatcgaatagataagactcttgagaagagtttataaagaggaggcaatccttgccttacaagccggttttgtaaggatgagttag 9378892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 24240222 - 24240185
Alignment:
Q  196 gccggttttgtaaggatgagttaggcctcgatattcat 233  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  24240222 gccggttttgtactgatgagttaggcctcgatattcat 24240185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 36092431 - 36092394
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  36092431 tcaccttacaagccggttttgtaaggatgagttaggcc 36092394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 237
Target Start/End: Complemental strand, 37531019 - 37530910
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgat 227  Q
    |||| ||| ||||||||| | ||||||||||||| || |  |||| || | || || ||| || ||| |||||||||| |||||||||||||||  ||||    
T  37531019 agtcccacgtcggatagataggattcttgagaagagtttataaagaggaggcactcctcaacttacaagccggttttgcaaggatgagttaggctccgat 37530920  T
Q  228 attcatgaca 237  Q
     |||||||||    
T  37530919 tttcatgaca 37530910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 237
Target Start/End: Complemental strand, 37756034 - 37755926
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgat 227  Q
    |||| ||||||||||||| | || |||||||||| || |  |||| || | || || |||||  ||| ||||||||| || |||||||||||||||| ||    
T  37756034 agtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcactcttcaccgtacaagccggtttt-tatggatgagttaggcctcaat 37755936  T
Q  228 attcatgaca 237  Q
    ||||||||||    
T  37755935 attcatgaca 37755926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 237
Target Start/End: Complemental strand, 37762008 - 37761900
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgat 227  Q
    |||| ||||||||||||| | || |||||||||| || |  |||| || | || || |||||  ||| ||||||||| || |||||||||||||||| ||    
T  37762008 agtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcactcttcaccgtacaagccggtttt-tatggatgagttaggcctcaat 37761910  T
Q  228 attcatgaca 237  Q
    ||||||||||    
T  37761909 attcatgaca 37761900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 40703450 - 40703413
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  40703450 tcacctcacaagccggttttgtaaggatgagttaggcc 40703413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 40703691 - 40703654
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  40703691 tcacctcacaagccggttttgtaaggatgagttaggcc 40703654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 41670898 - 41670935
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  41670898 tcaccttacaagccggttttgtaaggatgagttaggcc 41670935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 4454791 - 4454839
Alignment:
Q  170 aagtggggtcaatcatcacctaacacgccggttttgtaaggatgagtta 218  Q
    |||||||| ||||| |||||| |||  ||||||||||||||||||||||    
T  4454791 aagtgggggcaatcctcacctcacaaaccggttttgtaaggatgagtta 4454839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 162
Target Start/End: Complemental strand, 6214333 - 6214297
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagg 162  Q
    |||||| |||||||||||||||||| |||||||||||    
T  6214333 caagtcccacatcggatagacaagactcttgagaagg 6214297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 14991532 - 14991500
Alignment:
Q  201 ttttgtaaggatgagttaggcctcgatattcat 233  Q
    |||||||||||||||||||| ||||||||||||    
T  14991532 ttttgtaaggatgagttaggtctcgatattcat 14991500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 201 - 233
Target Start/End: Complemental strand, 15421143 - 15421111
Alignment:
Q  201 ttttgtaaggatgagttaggcctcgatattcat 233  Q
    |||||||||||||||||||| ||||||||||||    
T  15421143 ttttgtaaggatgagttaggtctcgatattcat 15421111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 23396873 - 23396913
Alignment:
Q  179 caatcatcacctaacacgccggttttgtaaggatgagttag 219  Q
    ||||||||| || ||| ||||||||||||||||||||||||    
T  23396873 caatcatcaacttacaagccggttttgtaaggatgagttag 23396913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 48116335 - 48116299
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggc 221  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  48116335 tcaccttacaagccggttttgtaaggatgagttaggc 48116299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 50; Significance: 1e-19; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 222
Target Start/End: Complemental strand, 37656831 - 37656734
Alignment:
Q  125 tcaagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    ||||||||||||||||||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  37656831 tcaagtctcacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 37656734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 48202 - 48106
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||||||||||||||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  48202 caagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 48106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 28358133 - 28358037
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||||||||||||||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  28358133 caagtcccacatcggatagacaagactcttgagaagagtttataaagaggagacaatcctcaccttacaagccggttttgtaaggatgagttaggcc 28358037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 125 - 222
Target Start/End: Complemental strand, 37781943 - 37781846
Alignment:
Q  125 tcaagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    ||||||||||||||||||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| || ||||||||||||||||||||||||    
T  37781943 tcaagtctcacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagctggttttgtaaggatgagttaggcc 37781846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 35527086 - 35526990
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||||||||||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  35527086 caagtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 35526990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 38376737 - 38376833
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||||||||||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  38376737 caagtcccacatcggatagataagactcttgagaagagtttataaagaggagacaatcctcaccttacaagccggttttgtaaggatgagttaggcc 38376833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 2908660 - 2908567
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttag 219  Q
    |||||| |||||||||||||||||| |||||||||  || |  |||| || | ||||| |||||| ||| ||||||||||||||||||||||||    
T  2908660 caagtcccacatcggatagacaagactcttgagaatagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 2908567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 3762919 - 3763008
Alignment:
Q  133 cacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    ||||||||||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  3762919 cacatcggatagataagactcttgagaagagtttataaagaggaggcaatcttcaccttacaagccggttttgtaaggatgagttaggcc 3763008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 34457102 - 34457198
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| || ||||||||||||||| |||||||||| || |  |||| ||   ||||| |||||| ||| |||||||||||||||||||||||||||    
T  34457102 caagtcccatatcggatagacaagactcttgagaagagtttataaagaggatgcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 34457198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 34457309 - 34457405
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||||||||||||||| |||||||||| || |  |||| ||   ||||  |||||| ||| |||||||||||||||||||||||||||    
T  34457309 caagtcccacatcggatagacaagactcttgagaagagtttataaagaggatgcaattctcaccttacaagccggttttgtaaggatgagttaggcc 34457405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 237
Target Start/End: Complemental strand, 84130 - 84021
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgat 227  Q
    |||| ||||||||||| | | ||||||||||||| || |  |||| || | || || |||||  ||| |||||||||||| |||||||||||| ||||||    
T  84130 agtcccacatcggatatataggattcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtatggatgagttaggtctcgat 84031  T
Q  228 attcatgaca 237  Q
    ||||||||||    
T  84030 attcatgaca 84021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 2908867 - 2908771
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||| ||||||||||| | |||||||  || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  2908867 caagtcccacatcagatagacaagacttttgagaatagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 2908771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 11632437 - 11632533
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||||||||||||||| |||||||||| || |  ||||  | | ||||| |||||| | | |||||||||||||||||||||| ||||    
T  11632437 caagtcccacatcggatagacaagactcttgagaagagtttataaagatgaggcaatcctcaccttataagccggttttgtaaggatgagttgggcc 11632533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 13413590 - 13413686
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||||||  ||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  13413590 caagtcccacatcaaatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 13413686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 40169139 - 40169043
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||| |||||| |||| |||||||||| || |  |||| || | ||||  |||||| ||| |||||||||||||||||||||||||||    
T  40169139 caagtcccacatcagatagataagactcttgagaagagtatataaagaggaggcaattctcaccttacaagccggttttgtaaggatgagttaggcc 40169043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 231
Target Start/End: Complemental strand, 22196354 - 22196319
Alignment:
Q  196 gccggttttgtaaggatgagttaggcctcgatattc 231  Q
    ||||||||||||||||||||||||||||||||||||    
T  22196354 gccggttttgtaaggatgagttaggcctcgatattc 22196319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 227
Target Start/End: Complemental strand, 22196649 - 22196550
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgat 227  Q
    |||| ||||||||||||| | || |||||||||| || |  |||| || | || ||||||||  ||| ||||||||||||||||||||||||||| ||||    
T  22196649 agtcccacatcggatagatatgactcttgagaagagtttataaagaggagacactcatcaccgtacaagccggttttgtaaggatgagttaggccccgat 22196550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 222
Target Start/End: Original strand, 38131772 - 38131866
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||| ||||||||||||| | || |||||||||| || |  |||| || | || || |||||| ||| |||||||||||||||||||||||||||    
T  38131772 agtcccacatcggatagataggactcttgagaagagtttataaagaggagacattcctcaccttacaagccggttttgtaaggatgagttaggcc 38131866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 141 - 222
Target Start/End: Complemental strand, 48394 - 48313
Alignment:
Q  141 atagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||||||| |||||||||  || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  48394 atagacaagactcttgagaaaagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 48313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 134 - 219
Target Start/End: Original strand, 24125076 - 24125161
Alignment:
Q  134 acatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttag 219  Q
    |||||||||| |||||| |||||||||| || |  |||| || |  |||| |||||| ||| ||||||||||||||||||||||||    
T  24125076 acatcggataaacaagactcttgagaagagtatataaagaggaggtaatcctcaccttacaagccggttttgtaaggatgagttag 24125161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 35527373 - 35527276
Alignment:
Q  126 caagtctcacatcggatagacaagattctt-gagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||||||||||||  |||| |||| |||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  35527373 caagtcccacatcggatagctaagactcttagagaagagtttacaaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 35527276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 231
Target Start/End: Complemental strand, 5095929 - 5095894
Alignment:
Q  196 gccggttttgtaaggatgagttaggcctcgatattc 231  Q
    |||||||||||| |||||||||||||||||||||||    
T  5095929 gccggttttgtagggatgagttaggcctcgatattc 5095894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 136 - 219
Target Start/End: Original strand, 15287069 - 15287152
Alignment:
Q  136 atcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttag 219  Q
    |||||||||| |||| ||||||||||||| |   ||| || | ||||| |||||| ||| ||||||||||||| ||||||||||    
T  15287069 atcggatagataagactcttgagaagggtatattaagaggaggcaatcctcaccttacaagccggttttgtaatgatgagttag 15287152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 128 - 219
Target Start/End: Complemental strand, 15510600 - 15510509
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttag 219  Q
    |||| ||||||||||||||| || |||||||||| || |  |||| || | ||||| |||||| ||| ||||||||||| | ||||||||||    
T  15510600 agtcccacatcggatagacacgactcttgagaagagtttataaagaggaggcaatcctcacctcacaagccggttttgtgatgatgagttag 15510509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 231
Target Start/End: Complemental strand, 29396371 - 29396336
Alignment:
Q  196 gccggttttgtaaggatgagttaggcctcgatattc 231  Q
    |||||||||||| |||||||||||||||||||||||    
T  29396371 gccggttttgtacggatgagttaggcctcgatattc 29396336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 219
Target Start/End: Complemental strand, 20720649 - 20720555
Alignment:
Q  125 tcaagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttag 219  Q
    ||||||| |||||| |||||| ||||||||||| ||| || || |||  || | || || |||| | ||| ||||||||||||||||||||||||    
T  20720649 tcaagtcccacatcagatagataagattcttgataagagtttgtaaaaaggaggcactcctcactttacaagccggttttgtaaggatgagttag 20720555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 185 - 231
Target Start/End: Original strand, 33040535 - 33040581
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcctcgatattc 231  Q
    |||||| ||| ||||||||||||||||| || |||||||||||||||    
T  33040535 tcaccttacaagccggttttgtaaggataaggtaggcctcgatattc 33040581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 222
Target Start/End: Complemental strand, 37995730 - 37995636
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||| ||||||||||||| |  | |||||||||| || |  |||| || | || || |||||| ||| |||||||||||||||||||||||||||    
T  37995730 agtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcattcctcaccttacaagccggttttgtaaggatgagttaggcc 37995636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 83839 - 83798
Alignment:
Q  196 gccggttttgtaaggatgagttaggcctcgatattcatgaca 237  Q
    |||||||||||| |||||||||||| |||||||||| |||||    
T  83839 gccggttttgtatggatgagttaggtctcgatattcgtgaca 83798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 1892129 - 1892092
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  1892129 tcaccttacaagccggttttgtaaggatgagttaggcc 1892092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 12965285 - 12965248
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  12965285 tcaccttacaagccggttttgtaaggatgagttaggcc 12965248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 13843762 - 13843799
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  13843762 tcaccttacaagccggttttgtaaggatgagttaggcc 13843799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 24918226 - 24918263
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  24918226 tcaccttacaagccggttttgtaaggatgagttaggcc 24918263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 24994134 - 24994171
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  24994134 tcaccttacaagccggttttgtaaggatgagttaggcc 24994171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 29432477 - 29432514
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  29432477 tcaccttacaagccggttttgtaaggatgagttaggcc 29432514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 222
Target Start/End: Complemental strand, 30770119 - 30770066
Alignment:
Q  169 aaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    ||||||||| ||||| |||||| | |  ||||||||||||||||||||||||||    
T  30770119 aaagtgggggcaatcctcacctcataaaccggttttgtaaggatgagttaggcc 30770066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 38663312 - 38663349
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  38663312 tcaccttacaagccggttttgtaaggatgagttaggcc 38663349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 40168950 - 40168861
Alignment:
Q  133 cacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||| |||| |||||||||| || |  |||| || | ||||| ||| || ||| || ||||||||||||||||||||||||    
T  40168950 cacatcagatagataagactcttgagaagagtatataaagaggaggcaatcctcatcttacaagctggttttgtaaggatgagttaggcc 40168861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 126 - 207
Target Start/End: Complemental strand, 43490354 - 43490273
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgta 207  Q
    |||||| ||||||||||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| ||||||||||||    
T  43490354 caagtcccacatcggatagataagactcttgagaagagtttataaagaggagacaatcttcaccttacaagccggttttgta 43490273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 222
Target Start/End: Complemental strand, 30758364 - 30758316
Alignment:
Q  174 ggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||| ||||| |||||| | | |||||||||||||||||||||||||||    
T  30758364 gggggcaatcctcacctcataagccggttttgtaaggatgagttaggcc 30758316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 224
Target Start/End: Complemental strand, 30769896 - 30769868
Alignment:
Q  196 gccggttttgtaaggatgagttaggcctc 224  Q
    |||||||||||||||||||||||||||||    
T  30769896 gccggttttgtaaggatgagttaggcctc 30769868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 5e-19; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 10989339 - 10989243
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||||||||||||||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  10989339 caagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 10989243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 125 - 222
Target Start/End: Original strand, 43599316 - 43599413
Alignment:
Q  125 tcaagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    ||||||| ||||||||||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  43599316 tcaagtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 43599413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 8559587 - 8559683
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||||||||||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  8559587 caagtcccacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 8559683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 218
Target Start/End: Complemental strand, 15011127 - 15011035
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagtta 218  Q
    |||||| |||||||||||||||||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||    
T  15011127 caagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagtta 15011035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 16454733 - 16454637
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||||||||||||||||| |||| |||| ||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  16454733 caagtctcacatcggatagataagactcttaagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 16454637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 35561672 - 35561765
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttag 219  Q
    |||||| ||||||||||||| ||||||||||||||| || |  |||| || | ||||| ||||||  || ||||||||||||||||||||||||    
T  35561672 caagtcccacatcggatagataagattcttgagaagagtttataaagaggaggcaatcctcaccttgcatgccggttttgtaaggatgagttag 35561765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 40902484 - 40902395
Alignment:
Q  133 cacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||||||||||||||| |||||||||| || |  |||| || | ||||| |||||| ||| ||||||||||||||||| |||||||||    
T  40902484 cacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggataagttaggcc 40902395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 10989132 - 10989036
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||| | ||||||||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  10989132 caagtcccacatcaggtagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 10989036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 15010919 - 15010823
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||||||||||||||| ||||||||||  | |  |||| || | ||||| |||||| ||| ||||||||| |||||||||||||||||    
T  15010919 caagtcccacatcggatagacaagactcttgagaagaatttataaagaggaggcaatcctcaccttacaagccggttttataaggatgagttaggcc 15010823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 20760758 - 20760662
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||||||||||||||| |||||||||| || |  ||||  | | ||||| |||||| |||  ||||||||||||||||||||||||||    
T  20760758 caagtcccacatcggatagacaagactcttgagaagagtttataaagatgaggcaatcctcaccttacaaaccggttttgtaaggatgagttaggcc 20760662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 219
Target Start/End: Original strand, 42228778 - 42228870
Alignment:
Q  127 aagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttag 219  Q
    ||||| |||||||||||||||||| |||||||||| || |  |||| || | ||||| |||||| ||| |||| |||||||||||||||||||    
T  42228778 aagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccgattttgtaaggatgagttag 42228870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 170 - 222
Target Start/End: Original strand, 7729956 - 7730008
Alignment:
Q  170 aagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||||| ||||| |||||| ||| |||||||||||||||||||||||||||    
T  7729956 aagtgggggcaatcctcacctcacaagccggttttgtaaggatgagttaggcc 7730008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 17607310 - 17607207
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgat 227  Q
    |||||||||||||||||| | |||||||| |||| || |  |||| || | || |  |||||  ||| ||| ||||||||||||||||||||||||||||    
T  17607310 agtctcacatcggatagataggattcttgtgaagagtttataaagaggaggcactactcaccgtacaagccagttttgtaaggatgagttaggcctcgat 17607211  T
Q  228 attc 231  Q
    ||||    
T  17607210 attc 17607207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 231
Target Start/End: Original strand, 35908754 - 35908789
Alignment:
Q  196 gccggttttgtaaggatgagttaggcctcgatattc 231  Q
    ||||||||||||||||||||||||||||||||||||    
T  35908754 gccggttttgtaaggatgagttaggcctcgatattc 35908789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 222
Target Start/End: Original strand, 32931409 - 32931503
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||| ||||||||||||| |  |||||||||||| || |  |||| || | || || |||||| ||| |||||||||||||||||||||||||||    
T  32931409 agtcccacatcggatagatatcattcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggcc 32931503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 225
Target Start/End: Original strand, 14019816 - 14019913
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcg 225  Q
    |||| ||||||||||||| | | ||||||||||| || |  |||| || | || || ||||| |||| ||||||||||||||||||||||||| ||||    
T  14019816 agtcccacatcggatagataggtttcttgagaagagtttataaagaggaggcactcctcaccgaacaagccggttttgtaaggatgagttaggtctcg 14019913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 233
Target Start/End: Original strand, 15711504 - 15711609
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgat 227  Q
    |||| ||||||||||||| | ||||||||||||| || |  |||| || | || || |||||  ||| ||| ||||| || |||||||||||||||||||    
T  15711504 agtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcctcaccgtacaagcctgttttatagggatgagttaggcctcgat 15711603  T
Q  228 attcat 233  Q
    ||||||    
T  15711604 attcat 15711609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 125 - 222
Target Start/End: Complemental strand, 30176563 - 30176466
Alignment:
Q  125 tcaagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    ||||||| |||||||||||||| ||| ||||||  || || |  |||| || | || || |||||| ||| |||||||||||||||||||||||||||    
T  30176563 tcaagtcccacatcggatagacgagactcttgatgagagtttataaagaggaggcactcttcacctcacaagccggttttgtaaggatgagttaggcc 30176466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 222
Target Start/End: Complemental strand, 3184001 - 3183913
Alignment:
Q  134 acatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||||||||| | || |||||||||| || |  |||| || | ||||| |||||| ||| ||||||||||||| |||||||||||||    
T  3184001 acatcggatagataggactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaacgatgagttaggcc 3183913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 224
Target Start/End: Complemental strand, 36993986 - 36993947
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcctc 224  Q
    |||||| ||| |||||||||||||||||||||||||||||    
T  36993986 tcaccttacaagccggttttgtaaggatgagttaggcctc 36993947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 222
Target Start/End: Original strand, 18905864 - 18905958
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||| ||||||||||||| |  | |||||||||| || |  |||| || | || || |||||| ||| |||||||||||||||||||||||||||    
T  18905864 agtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggcc 18905958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 238
Target Start/End: Complemental strand, 20232435 - 20232393
Alignment:
Q  196 gccggttttgtaaggatgagttaggcctcgatattcatgacac 238  Q
    ||||||||||||  |||||||||||||||||||||||| ||||    
T  20232435 gccggttttgtatagatgagttaggcctcgatattcattacac 20232393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 233
Target Start/End: Complemental strand, 38287989 - 38287955
Alignment:
Q  199 ggttttgtaaggatgagttaggcctcgatattcat 233  Q
    |||||||||||||||||||||| ||||||||||||    
T  38287989 ggttttgtaaggatgagttaggtctcgatattcat 38287955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 210
Target Start/End: Complemental strand, 4196041 - 4195964
Alignment:
Q  133 cacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaagg 210  Q
    |||||||||||||||||| |||||||||| || |   ||| || | ||||| |||||| ||| |||||||||||||||    
T  4196041 cacatcggatagacaagactcttgagaagagtttatcaagaggaggcaatcctcaccttacaagccggttttgtaagg 4195964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 13655174 - 13655219
Alignment:
Q  179 caatcatcacctaacacgccggttttgtaaggatgagttaggcctc 224  Q
    |||||||||||| ||| |||| |||||||||||||||||| |||||    
T  13655174 caatcatcaccttacaagccgattttgtaaggatgagttaagcctc 13655219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 224
Target Start/End: Original strand, 13713816 - 13713861
Alignment:
Q  179 caatcatcacctaacacgccggttttgtaaggatgagttaggcctc 224  Q
    |||||||||||| ||| |||| |||||||||||||||||| |||||    
T  13713816 caatcatcaccttacaagccgattttgtaaggatgagttaagcctc 13713861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 21653869 - 21653906
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  21653869 tcaccttacaagccggttttgtaaggatgagttaggcc 21653906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 34248142 - 34248179
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  34248142 tcaccttacaagccggttttgtaaggatgagttaggcc 34248179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 34248424 - 34248461
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  34248424 tcaccttacaagccggttttgtaaggatgagttaggcc 34248461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 36997231 - 36997268
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  36997231 tcaccttacaagccggttttgtaaggatgagttaggcc 36997268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 221
Target Start/End: Original strand, 21653392 - 21653428
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggc 221  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  21653392 tcaccttacaagccggttttgtaaggatgagttaggc 21653428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 49; Significance: 5e-19; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 15101209 - 15101113
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||||||||||||||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  15101209 caagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 15101113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 16877108 - 16877012
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||||||||||||||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  16877108 caagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 16877012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 219
Target Start/End: Complemental strand, 5269370 - 5269278
Alignment:
Q  127 aagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttag 219  Q
    ||||||||||||||||||| |||| |||||||||| || |  |||| |  | ||||| |||||| ||| ||||||||||||||||||||||||    
T  5269370 aagtctcacatcggatagataagactcttgagaagagtttataaagagaaggcaatcctcaccttacaagccggttttgtaaggatgagttag 5269278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 16876928 - 16876832
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||||| |||||||||||| |||||||||  || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  16876928 caagtcccacataggatagacaagactcttgagaatagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 16876832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 132 - 231
Target Start/End: Original strand, 8427562 - 8427661
Alignment:
Q  132 tcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgatattc 231  Q
    |||||||||||| | ||||||||||||||| || | ||||| || | || || |||||  ||| | ||||||||||||| ||||||||||||||||||||    
T  8427562 tcacatcggatatataagattcttgagaagagtttagaaagaggaggcactcctcaccgtacaagtcggttttgtaaggttgagttaggcctcgatattc 8427661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 11313473 - 11313384
Alignment:
Q  133 cacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    ||||||||||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| ||| |||||||||||||||||||||||    
T  11313473 cacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccagttttgtaaggatgagttaggcc 11313384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 222
Target Start/End: Original strand, 24558797 - 24558890
Alignment:
Q  129 gtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    ||||||||||||||||| |||| |||| ||||| || |  |||| || | ||||| |||||| ||| || ||||||||||||||||||||||||    
T  24558797 gtctcacatcggatagataagactctttagaagagtttataaagaggagacaatcctcaccttacaagctggttttgtaaggatgagttaggcc 24558890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 206
Target Start/End: Complemental strand, 6623523 - 6623443
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgt 206  Q
    |||||| ||||||||||||| |||| |||||||||| || |  ||||||||| ||||| |||||| ||| |||||||||||    
T  6623523 caagtcccacatcggatagataagactcttgagaagagtatataaagtgggggcaatcctcaccttacaagccggttttgt 6623443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 24558589 - 24558685
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||| |||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| ||||||||||| |||||||||||||||    
T  24558589 caagtcccacatcagatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtgaggatgagttaggcc 24558685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 16590190 - 16590283
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttag 219  Q
    |||||| |||||||||||||||||| ||||| ||||  | |  |||| || | ||||| |||| | ||| ||||||||||||||||||||||||    
T  16590190 caagtcccacatcggatagacaagactcttgggaagaatttataaagaggaggcaatcctcactttacaagccggttttgtaaggatgagttag 16590283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 16605190 - 16605097
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttag 219  Q
    |||||| |||||||||||||||||| ||||| ||||  | |  |||| || | ||||| |||| | ||| ||||||||||||||||||||||||    
T  16605190 caagtcccacatcggatagacaagactcttgggaagaatttataaagaggaggcaatcctcactttacaagccggttttgtaaggatgagttag 16605097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 28149806 - 28149895
Alignment:
Q  133 cacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    ||||||||||||| || | |||||| ||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  28149806 cacatcggatagataaaactcttgataagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 28149895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 179 - 231
Target Start/End: Original strand, 25184269 - 25184321
Alignment:
Q  179 caatcatcacctaacacgccggttttgtaaggatgagttaggcctcgatattc 231  Q
    ||||| |||||| ||| |||||||||||  |||||||||||||||||||||||    
T  25184269 caatcctcaccttacaagccggttttgtggggatgagttaggcctcgatattc 25184321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 222
Target Start/End: Complemental strand, 17147950 - 17147907
Alignment:
Q  179 caatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    ||||| |||||| ||| |||||||||||||||||||||||||||    
T  17147950 caatcctcaccttacaagccggttttgtaaggatgagttaggcc 17147907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 222
Target Start/End: Original strand, 8144025 - 8144119
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||| ||||||||||||| |  | |||||||||| || |  |||| || | || || |||||| ||| |||||||||||||||||||||||||||    
T  8144025 agtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggcc 8144119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 30505525 - 30505571
Alignment:
Q  173 tggggtcaatcatcacctaacacgccggttttgtaaggatgagttag 219  Q
    ||||| ||||| |||||||||| | ||||||||||||||||||||||    
T  30505525 tggggacaatcctcacctaacaagtcggttttgtaaggatgagttag 30505571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 1744881 - 1744844
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  1744881 tcaccttacaagccggttttgtaaggatgagttaggcc 1744844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 10418377 - 10418340
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  10418377 tcaccttacaagccggttttgtaaggatgagttaggcc 10418340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 10733477 - 10733440
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  10733477 tcaccttacaagccggttttgtaaggatgagttaggcc 10733440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 24055148 - 24055111
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  24055148 tcaccttacaagccggttttgtaaggatgagttaggcc 24055111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 26339874 - 26339833
Alignment:
Q  196 gccggttttgtaaggatgagttaggcctcgatattcatgaca 237  Q
    |||||||||| ||||||||||||||| ||||||||| |||||    
T  26339874 gccggttttgaaaggatgagttaggcttcgatattcgtgaca 26339833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 5e-19; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 12016781 - 12016685
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||||||||||||||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  12016781 caagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 12016685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 12016989 - 12016893
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||||||||||||||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  12016989 caagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 12016893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 43943679 - 43943775
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||||||||||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  43943679 caagtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 43943775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 125 - 224
Target Start/End: Original strand, 39110722 - 39110821
Alignment:
Q  125 tcaagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctc 224  Q
    ||||||||||||||||||||| |||| |||||||||| || || |||| || | ||||| |||||| ||| |||| |||||||||  |||||||||||||    
T  39110722 tcaagtctcacatcggatagataagaatcttgagaagagtatgtaaagaggaggcaatcctcaccttacaagccgattttgtaagattgagttaggcctc 39110821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 224
Target Start/End: Original strand, 5488373 - 5488471
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctc 224  Q
    |||||| ||||||||||| | |||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||||    
T  5488373 caagtcccacatcggataaataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcctc 5488471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 220
Target Start/End: Complemental strand, 25753703 - 25753609
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttagg 220  Q
    |||||| |||||||||||||||||| |||||| ||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||    
T  25753703 caagtcccacatcggatagacaagactcttgataagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttagg 25753609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 128 - 237
Target Start/End: Complemental strand, 46529019 - 46528910
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgat 227  Q
    ||||||||||||||||||   ||||||||||||| || |  |||| || | || || |||||  ||| |||||||||||| |||||||||||||||||||    
T  46529019 agtctcacatcggatagattggattcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtatggatgagttaggcctcgat 46528920  T
Q  228 attcatgaca 237  Q
    |||| |||||    
T  46528919 attcgtgaca 46528910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 21498537 - 21498633
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||||||||||||||| |||||||||| || |  |||| |  |  |||| |||||| ||| |||||||||||||||||||||||||||    
T  21498537 caagtcccacatcggatagacaagactcttgagaagagtatataaagagaaggtaatcctcaccttacaagccggttttgtaaggatgagttaggcc 21498633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 130 - 222
Target Start/End: Original strand, 23018480 - 23018572
Alignment:
Q  130 tctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||||||||||||| | || |||||||||| || |  |||| || | || || |||||| ||| |||||||||||||||||||||||||||    
T  23018480 tctcacatcggatagatatgactcttgagaagagtttataaagaggaggcattcctcaccttacaagccggttttgtaaggatgagttaggcc 23018572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 222
Target Start/End: Complemental strand, 27634423 - 27634328
Alignment:
Q  127 aagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    ||||| ||||||||||||| |||| |||||||||| || |  |||| || | ||||  |||||| ||| |||| ||||||||||||||||||||||    
T  27634423 aagtcccacatcggatagataagactcttgagaagagtatataaagaggaggcaattctcaccttacaagccgattttgtaaggatgagttaggcc 27634328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 126 - 221
Target Start/End: Complemental strand, 49380978 - 49380883
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggc 221  Q
    |||||||||||||||||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| ||||||||||| | ||| ||||||||    
T  49380978 caagtctcacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtgatgataagttaggc 49380883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 196 - 230
Target Start/End: Original strand, 33912119 - 33912153
Alignment:
Q  196 gccggttttgtaaggatgagttaggcctcgatatt 230  Q
    |||||||||||||||||||||||||||||||||||    
T  33912119 gccggttttgtaaggatgagttaggcctcgatatt 33912153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 29113462 - 29113551
Alignment:
Q  133 cacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| || ||||||||||||||||||||||||    
T  29113462 cacatcagatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagctggttttgtaaggatgagttaggcc 29113551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 224
Target Start/End: Original strand, 15665161 - 15665257
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctc 224  Q
    |||| ||||||||||||| | || |||||||||| || |  | || || | || || |||||| ||| |||||||||||||||||||||||||||||    
T  15665161 agtcccacatcggatagataggactcttgagaagagtttatatagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggcctc 15665257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 17222721 - 17222669
Alignment:
Q  170 aagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||||| ||||| |||||| ||| |||||||||||||||||| ||||||||    
T  17222721 aagtgggggcaatcctcacctcacaagccggttttgtaaggatgtgttaggcc 17222669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 28395184 - 28395279
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||||| ||||||| |||| |||||| ||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  28395184 caagtcccacattggatagataagactcttga-aagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 28395279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 39110912 - 39111004
Alignment:
Q  125 tcaagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagtt 217  Q
    ||||||| ||||||||||||| |||| |||||||||| || |  |||| || | ||||| || ||| ||| ||||||||||||||| ||||||    
T  39110912 tcaagtcccacatcggatagataagactcttgagaagagtatataaagaggagacaatcctcgccttacaagccggttttgtaaggttgagtt 39111004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 11290177 - 11290280
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgat 227  Q
    |||| ||||||||||||| | || |||||||||| || |  |||| || | || || |||||  ||| |||||||||||| |||||||||||||||| ||    
T  11290177 agtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcattcctcaccgtacaagccggttttgtatggatgagttaggcctcaat 11290276  T
Q  228 attc 231  Q
    ||||    
T  11290277 attc 11290280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 171 - 222
Target Start/End: Complemental strand, 27634584 - 27634533
Alignment:
Q  171 agtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    ||||||| ||||| |||||| ||| ||||||||||||| |||||||||||||    
T  27634584 agtgggggcaatcctcacctcacaagccggttttgtaacgatgagttaggcc 27634533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 222
Target Start/End: Original strand, 990555 - 990649
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||| ||||||||||||| || | |||||||||| || |  |||| || | || || |||||| ||| | |||||||||||||||||||||||||    
T  990555 agtcccacatcggatagataacactcttgagaagagtttataaagaggaggcactcctcaccttacaagtcggttttgtaaggatgagttaggcc 990649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 172 - 222
Target Start/End: Complemental strand, 2221035 - 2220985
Alignment:
Q  172 gtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||||| |||||| ||| |||||||||||||||| ||||||||||    
T  2221035 gtgggggcaatcctcacctcacaagccggttttgtaaggacgagttaggcc 2220985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 222
Target Start/End: Complemental strand, 29669459 - 29669365
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||| ||||||||||||| |  | |||||||||| || |  |||| || | || || |||||| ||| |||||||||||||||||||||||||||    
T  29669459 agtcccacatcggatagatagcactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggcc 29669365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 222
Target Start/End: Original strand, 51469489 - 51469583
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||| ||||||||||||| | || |||||||||| || |  |||| || | || || |||||| ||| ||||||| |||||||||||||||||||    
T  51469489 agtcccacatcggatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttgtgtaaggatgagttaggcc 51469583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 222
Target Start/End: Original strand, 53740190 - 53740284
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||| ||||||||||||| |  | |||||||||| || |  |||| || | || || |||||| ||| |||||||||||||||||||||||||||    
T  53740190 agtcccacatcggatagatagtactcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggcc 53740284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 21497722 - 21497685
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  21497722 tcaccttacaagccggttttgtaaggatgagttaggcc 21497685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 21498252 - 21498289
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  21498252 tcaccttacaagccggttttgtaaggatgagttaggcc 21498289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 237
Target Start/End: Original strand, 26941937 - 26941978
Alignment:
Q  196 gccggttttgtaaggatgagttaggcctcgatattcatgaca 237  Q
    |||||||||||||||||| ||||||||| ||||||| |||||    
T  26941937 gccggttttgtaaggatgggttaggcctagatattcctgaca 26941978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 36558505 - 36558468
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  36558505 tcaccttacaagccggttttgtaaggatgagttaggcc 36558468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 41176771 - 41176808
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  41176771 tcaccttacaagccggttttgtaaggatgagttaggcc 41176808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 43972420 - 43972457
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  43972420 tcaccttacaagccggttttgtaaggatgagttaggcc 43972457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 45427291 - 45427254
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  45427291 tcaccttacaagccggttttgtaaggatgagttaggcc 45427254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 50858077 - 50858114
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  50858077 tcaccttacaagccggttttgtaaggatgagttaggcc 50858114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 128 - 237
Target Start/End: Complemental strand, 50868109 - 50868000
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgat 227  Q
    |||| ||||||||||||| | || |||||||||| || |  |||| || | || || |||||  ||| |||||||||||| |||||||| ||||||| ||    
T  50868109 agtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcattcctcaccgtacaagccggttttgtatggatgagtcaggcctcaat 50868010  T
Q  228 attcatgaca 237  Q
    |||| |||||    
T  50868009 attcgtgaca 50868000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 51470548 - 51470585
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  51470548 tcaccttacaagccggttttgtaaggatgagttaggcc 51470585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 52214680 - 52214717
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  52214680 tcaccttacaagccggttttgtaaggatgagttaggcc 52214717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 27634150 - 27634098
Alignment:
Q  170 aagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||||| ||||| |||||| |||  ||| ||||||||||||||||||||||    
T  27634150 aagtgggggcaatcctcacctcacaaaccgattttgtaaggatgagttaggcc 27634098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 221
Target Start/End: Complemental strand, 28496544 - 28496508
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggc 221  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  28496544 tcaccttacaagccggttttgtaaggatgagttaggc 28496508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 31254476 - 31254424
Alignment:
Q  170 aagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||||| ||||| |||||| |||  |||||||||| |||||||||||||||    
T  31254476 aagtgggggcaatcctcaccttacaaaccggttttgtgaggatgagttaggcc 31254424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 52827330 - 52827234
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||||||||| ||||||| | || |||||| ||| || |  |||| || | || || |||||| ||| ||||||||||||||||||||| |||||    
T  52827330 caagtctcacattggatagataggactcttgataagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagtcaggcc 52827234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 206
Target Start/End: Complemental strand, 53559403 - 53559323
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgt 206  Q
    |||||| ||||||||||||| || | |||||||||| || |  ||||||||| ||||| |||||| ||| |||| ||||||    
T  53559403 caagtcccacatcggatagataaaactcttgagaagagtatataaagtgggggcaatcctcaccttacaagccgattttgt 53559323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 49; Significance: 5e-19; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 9264391 - 9264295
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||||||||||||||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  9264391 caagtcccacatcggatagacaagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 9264295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 50692329 - 50692425
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||||||||||||||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  50692329 caagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 50692425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 4191220 - 4191124
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||||||||||||||| |||||||||| || |  |||| || | ||||| | |||| ||| |||||||||||||||||||||||||||    
T  4191220 caagtcccacatcggatagacaagactcttgagaagagtttataaagaggagacaatcctgaccttacaagccggttttgtaaggatgagttaggcc 4191124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 9264184 - 9264088
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||||||||||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  9264184 caagtcccacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 9264088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 22339747 - 22339843
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||||||||||||||| |||||||||| || |  |||| || | ||||| |||||| ||| | |||||||||||||||||||||||||    
T  22339747 caagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagtcggttttgtaaggatgagttaggcc 22339843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 39078869 - 39078773
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| || ||||||||||||||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  39078869 caagtcccatatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 39078773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 221
Target Start/End: Complemental strand, 39956773 - 39956677
Alignment:
Q  125 tcaagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggc 221  Q
    ||||||| |||||| ||||||||||| |||||||||| || |  |||| || | ||||| |||||| ||| ||||||||||||||||||||||||||    
T  39956773 tcaagtcccacatcagatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggc 39956677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 49477540 - 49477636
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||||||||||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  49477540 caagtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 49477636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 50692532 - 50692628
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||||||||||||||| |||||| ||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  50692532 caagtcccacatcggatagacaagactcttgataagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 50692628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 222
Target Start/End: Complemental strand, 21832296 - 21832201
Alignment:
Q  127 aagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||||||||||||||||||||| |||||||||  || |  ||||  | | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  21832296 aagtctcacatcggatagacaagactcttgagaaaagtttataaagatgaggcaatcctcacctcacaagccggttttgtaaggatgagttaggcc 21832201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 222
Target Start/End: Complemental strand, 51642732 - 51642637
Alignment:
Q  127 aagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    ||||| ||||||||||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  51642732 aagtcccacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 51642637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 9264598 - 9264502
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||||||||||||| |||| |||||||||| || |  |||| || | ||||| |||| | ||| |||||||||||||||||||||||||||    
T  9264598 caagtcccacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcactttacaagccggttttgtaaggatgagttaggcc 9264502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 22407746 - 22407650
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||||||||||||||| ||| |||||| || |  |||| || | || || |||||| ||| |||||||||||||||||||||||||||    
T  22407746 caagtcccacatcggatagacaagactctcgagaagagtatataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggcc 22407650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 126 - 221
Target Start/End: Original strand, 42258916 - 42259011
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggc 221  Q
    |||||| ||||||||||||| ||||||||||||||| || |  |||| || | ||||| |||||| ||| |||| ||||| |||||||||||||||    
T  42258916 caagtcccacatcggatagataagattcttgagaagagtatataaagaggaggcaatcctcaccttacaagccgattttgcaaggatgagttaggc 42259011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 127 - 221
Target Start/End: Original strand, 37223582 - 37223676
Alignment:
Q  127 aagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggc 221  Q
    ||||| ||||||||||||| |||| || ||||||| || |  |||| || | |||||||||||| ||| |||||||||||||||| |||||||||    
T  37223582 aagtcccacatcggatagataagactcctgagaagagtttataaagaggaggcaatcatcaccttacaagccggttttgtaaggaagagttaggc 37223676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 126 - 224
Target Start/End: Complemental strand, 51338539 - 51338441
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctc 224  Q
    |||||| |||||| |||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||| ||||    
T  51338539 caagtcccacatcagatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttagtcctc 51338441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 10453791 - 10453706
Alignment:
Q  136 atcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggc 221  Q
    |||||||||| | |||||||||||||||| |  |||| || | || || |||||| ||| ||||||||||||||||||||||||||    
T  10453791 atcggatagataggattcttgagaagggtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggc 10453706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 196 - 237
Target Start/End: Complemental strand, 10856654 - 10856613
Alignment:
Q  196 gccggttttgtaaggatgagttaggcctcgatattcatgaca 237  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  10856654 gccggttttgtaaggatgagttaggcctcgatattcgtgaca 10856613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 222
Target Start/End: Complemental strand, 21832790 - 21832693
Alignment:
Q  125 tcaagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    ||||||| |||||||||||||||||| |||||||||| || |  || | || | ||||| |||||| | | || ||||||||||||||||||||||||    
T  21832790 tcaagtcccacatcggatagacaagactcttgagaagagtttataaggaggagacaatcctcaccttatatgctggttttgtaaggatgagttaggcc 21832693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 54591563 - 54591470
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttag 219  Q
    |||||| |||||||||||||||||| |||||||||| || |  ||||  | | ||||| |||||| ||| |||||||||||||| |||||||||    
T  54591563 caagtcccacatcggatagacaagactcttgagaagagtttataaaggtgaggcaatcctcaccttacaagccggttttgtaagcatgagttag 54591470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 4029742 - 4029646
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||||||||||||| |||| |||||||||| || |  |||| ||   ||||| |||||| |||  ||||||||||||||||||||||||||    
T  4029742 caagtcccacatcggatagataagactcttgagaagagtttataaagaggatacaatcttcaccttacaaaccggttttgtaaggatgagttaggcc 4029646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 37058869 - 37058773
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||| ||||||||||| |||||||||| || |  |||| || |  |||| |||||| |||  ||||||||||||||||||||||||||    
T  37058869 caagtcccacatcagatagacaagactcttgagaagagtatataaagaggaggtaatcctcaccttacaaaccggttttgtaaggatgagttaggcc 37058773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 51642526 - 51642430
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| | ||||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  51642526 caagtcccacgttggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 51642430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 222
Target Start/End: Complemental strand, 22407538 - 22407443
Alignment:
Q  127 aagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    ||||| |||||||||||||||| | ||| |||||| || |  |||| || | || || |||||| ||| |||||||||||||||||||||||||||    
T  22407538 aagtcccacatcggatagacaaaactctcgagaagagtatataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggcc 22407443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 15820701 - 15820591
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgat 227  Q
    |||| ||||||||||||| | ||||||||||||| || |  || | || | || || |||||  ||| |||||||||||| |||||||||||||||||||    
T  15820701 agtcccacatcggatagataggattcttgagaagagtttataacgaggagacactcctcaccgtacaagccggttttgtagggatgagttaggcctcgat 15820602  T
Q  228 attcatgacac 238  Q
     | ||||||||    
T  15820601 ttccatgacac 15820591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 233
Target Start/End: Original strand, 9180376 - 9180481
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgat 227  Q
    |||| ||||||||||||| | ||||||||||||  || |  |||| || | || || |||||  ||| || |||||||||||||| ||||||||||||||    
T  9180376 agtcccacatcggatagataggattcttgagaaaagtttataaagaggagacactcctcaccgtacaagctggttttgtaaggatcagttaggcctcgat 9180475  T
Q  228 attcat 233  Q
    ||||||    
T  9180476 attcat 9180481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 229
Target Start/End: Complemental strand, 11244637 - 11244536
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgat 227  Q
    |||| ||||||||||||| | | ||||||||||| || |  |||| || | || || |||||  ||| ||||||||||||||||||||||||| ||||||    
T  11244637 agtcccacatcggatagataggtttcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtaaggatgagttaggtctcgat 11244538  T
Q  228 at 229  Q
    ||    
T  11244537 at 11244536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 196 - 233
Target Start/End: Complemental strand, 16051563 - 16051526
Alignment:
Q  196 gccggttttgtaaggatgagttaggcctcgatattcat 233  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  16051563 gccggttttgtaaggatgagttaggtctcgatattcat 16051526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 237
Target Start/End: Complemental strand, 48511735 - 48511626
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgat 227  Q
    |||| ||||||||||||| | || |||||||||| || |  |||| || | || || |||||  ||| |||||||||||| |||||||||||||||| ||    
T  48511735 agtcccacatcggatagataggaatcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtatggatgagttaggcctcaat 48511636  T
Q  228 attcatgaca 237  Q
    |||| |||||    
T  48511635 attcgtgaca 48511626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 39956565 - 39956469
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||| ||||||||||| |||| ||||| || |  |||| || | ||||| |||||| ||| ||| ||||||||||||||| |||||||    
T  39956565 caagtcccacatcagatagacaagaatcttaagaagagtttataaagaggagacaatcctcaccttacaagccagttttgtaaggatgaattaggcc 39956469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 218
Target Start/End: Complemental strand, 53640270 - 53640178
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagtta 218  Q
    |||||| |||||| |||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| ||||||| |||||||||||||||    
T  53640270 caagtcccacatcagatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttatgtaaggatgagtta 53640178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 210
Target Start/End: Original strand, 54495537 - 54495621
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaagg 210  Q
    |||||| ||||||||||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||    
T  54495537 caagtcccacatcggatagataagactcttgagaagagtttataaagaggagacaatcctcaccttacaagccggttttgtaagg 54495621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 10450744 - 10450641
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgat 227  Q
    |||| ||||||||||||| | | ||||||||||| || |  |||| || | || || |||||  ||| |||||||||||  |||||||||||||||||||    
T  10450744 agtcccacatcggatagataggtttcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtggggatgagttaggcctcgat 10450645  T
Q  228 attc 231  Q
    ||||    
T  10450644 attc 10450641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 133 - 224
Target Start/End: Original strand, 11414377 - 11414467
Alignment:
Q  133 cacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctc 224  Q
    ||||||||||| | |||| |||||||||| || |  |||| || | ||||| |||||| | | |||||||||||||||||||||||||||||    
T  11414377 cacatcggata-ataagactcttgagaagagtttataaagaggagacaatcctcaccttagaagccggttttgtaaggatgagttaggcctc 11414467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 222
Target Start/End: Original strand, 49477386 - 49477429
Alignment:
Q  179 caatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    ||||| |||||| ||| |||||||||||||||||||||||||||    
T  49477386 caatcctcaccttacaagccggttttgtaaggatgagttaggcc 49477429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 233
Target Start/End: Complemental strand, 16045395 - 16045361
Alignment:
Q  199 ggttttgtaaggatgagttaggcctcgatattcat 233  Q
    |||||||||||||||||||||| ||||||||||||    
T  16045395 ggttttgtaaggatgagttaggtctcgatattcat 16045361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 233
Target Start/End: Complemental strand, 16060910 - 16060876
Alignment:
Q  199 ggttttgtaaggatgagttaggcctcgatattcat 233  Q
    |||||||||||||||||||||| ||||||||||||    
T  16060910 ggttttgtaaggatgagttaggtctcgatattcat 16060876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 3985838 - 3985875
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  3985838 tcaccttacaagccggttttgtaaggatgagttaggcc 3985875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 19820573 - 19820528
Alignment:
Q  179 caatcatcacctaacacgccggttttgtaaggatgagttaggcctc 224  Q
    ||||| |||||| |||  ||||||||||||||||||||||||||||    
T  19820573 caatcctcaccttacaaaccggttttgtaaggatgagttaggcctc 19820528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 241
Target Start/End: Complemental strand, 40769940 - 40769895
Alignment:
Q  196 gccggttttgtaaggatgagttaggcctcgatattcatgacacaaa 241  Q
    |||||||||||| |||||||||||||||| |||||| || ||||||    
T  40769940 gccggttttgtatggatgagttaggcctcaatattcgtgtcacaaa 40769895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 44573704 - 44573741
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  44573704 tcaccttacaagccggttttgtaaggatgagttaggcc 44573741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 44574001 - 44574038
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  44574001 tcaccttacaagccggttttgtaaggatgagttaggcc 44574038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 51338442 - 51338405
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  51338442 tcaccttacaagccggttttgtaaggatgagttaggcc 51338405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 233
Target Start/End: Original strand, 53966329 - 53966366
Alignment:
Q  196 gccggttttgtaaggatgagttaggcctcgatattcat 233  Q
    |||||||||||| |||||||||||||||| ||||||||    
T  53966329 gccggttttgtatggatgagttaggcctcaatattcat 53966366  T

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Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 34992583 - 34992679
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||| |||||| |||| |||||||||| || |  |||| || | ||||| ||| || ||| |||||||||||  ||||||||||||||    
T  34992583 caagtcccacatcagatagataagactcttgagaagagtttataaagaggaggcaatcctcatctcacaagccggttttgtgcggatgagttaggcc 34992679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 5e-19; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 20999087 - 20998991
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||||||||||||||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  20999087 caagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 20998991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 34775363 - 34775459
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||||||||||||||| ||||||||||  | |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  34775363 caagtcccacatcggatagacaagactcttgagaagaatttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 34775459  T

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Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 16006983 - 16007076
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttag 219  Q
    |||||| |||||||||||||||||| |||||||||| || |  |||| || |  |||| |||||| ||| ||||||||||||||||||||||||    
T  16006983 caagtcccacatcggatagacaagactcttgagaagagtatataaagaggaggtaatcctcaccttacaagccggttttgtaaggatgagttag 16007076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 33985867 - 33985773
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||||||||||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  33985867 caagtcccacatcggatagataagactcttgagaagagtat--aaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 33985773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 218
Target Start/End: Complemental strand, 883699 - 883607
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagtta 218  Q
    |||||| ||||||||||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||    
T  883699 caagtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagtta 883607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 883856 - 883952
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| || ||||||||||||||| |||||||||| || |  ||||  | | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  883856 caagtcccatatcggatagacaagactcttgagaagagtttataaaggagaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 883952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 12431904 - 12432000
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||||||||||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||| ||||||    
T  12431904 caagtcccacatcggatagataagactcttgagaagagtttataaagaggagacaatcctcaccttacaagccggttttgtaaggatgagctaggcc 12432000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 17727410 - 17727506
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||||||||||||| |||| |||||||||| || |  |||| |  | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  17727410 caagtcccacatcggatagataagactcttgagaagagtttataaagagaaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 17727506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 19860043 - 19860139
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||||||||||||||| |||||||||| || |  |||| || | |||||  ||||| ||| ||||||||||||||||||| |||||||    
T  19860043 caagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatccacaccttacaagccggttttgtaaggatgatttaggcc 19860139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 25621383 - 25621287
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||||||||||||||||| |||| |||||||||| || |  |||| ||   ||| | |||||| ||| |||||||||||||||||||||||||||    
T  25621383 caagtctcacatcggatagataagactcttgagaagagtatataaagaggaaacaaccctcaccttacaagccggttttgtaaggatgagttaggcc 25621287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 231
Target Start/End: Complemental strand, 32810965 - 32810869
Alignment:
Q  135 catcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgatattc 231  Q
    ||||||||||| | ||||||||| ||| || |  |||| || | |||||||||||| ||| |||||||||||  |||||||||||||||||||||||    
T  32810965 catcggatagataggattcttgataagagtttataaagaggagacaatcatcaccttacaagccggttttgtggggatgagttaggcctcgatattc 32810869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 10862154 - 10862051
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgat 227  Q
    |||| ||||||||||||| | ||||||||||||| || |  |||| || | || ||||||||  ||| |||||||||||||||||||||||| |||| ||    
T  10862154 agtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcatcaccgtacaagccggttttgtaaggatgagttagacctccat 10862055  T
Q  228 attc 231  Q
    ||||    
T  10862054 attc 10862051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 128 - 222
Target Start/End: Complemental strand, 3976567 - 3976473
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||| ||||||||||||| || |||||||||||| || |  |||| || | || || |||||| ||| |||||||||||||||||||||||||||    
T  3976567 agtcccacatcggatagataatattcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggcc 3976473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 237
Target Start/End: Original strand, 936820 - 936929
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgat 227  Q
    |||||||||||||||||| | || |||||||||| || |  |||| || | || || |||||  ||| ||| ||||||||  ||||||||||||||||||    
T  936820 agtctcacatcggatagataggaatcttgagaagagtttataaagaggagacactcctcaccgtacaagccagttttgtatagatgagttaggcctcgat 936919  T
Q  228 attcatgaca 237  Q
    ||||||||||    
T  936920 attcatgaca 936929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 222
Target Start/End: Complemental strand, 3435585 - 3435488
Alignment:
Q  125 tcaagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    ||||||| ||||||||||||| |||| |||||||||| || |  | || || | ||||| |||||| |||  ||||||||||||||||||||||||||    
T  3435585 tcaagtcccacatcggatagataagactcttgagaagagtttatacagaggaggcaatcctcaccttacaaaccggttttgtaaggatgagttaggcc 3435488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 884063 - 884159
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||||||||||  ||| |||||||||| || |  |||| || | ||||| |||||| ||| ||||||||||||||| |||||||||||    
T  884063 caagtcccacatcggatagatgagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggttgagttaggcc 884159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 40009980 - 40010076
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||||||||||||| || | |||||||||| |  | ||||| || | ||||| |||||| ||| |||||||||||||||||| ||||||||    
T  40009980 caagtcccacatcggatagataaaactcttgagaagagcatagaaagaggaggcaatcctcaccttacaagccggttttgtaaggatgtgttaggcc 40010076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 196 - 231
Target Start/End: Original strand, 17325246 - 17325281
Alignment:
Q  196 gccggttttgtaaggatgagttaggcctcgatattc 231  Q
    ||||||||||||||||||||||||||||||||||||    
T  17325246 gccggttttgtaaggatgagttaggcctcgatattc 17325281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 170 - 224
Target Start/End: Complemental strand, 93789 - 93735
Alignment:
Q  170 aagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctc 224  Q
    |||||||| ||||| |||||| ||| ||||||||||| |||||||||||||||||    
T  93789 aagtgggggcaatcctcacctcacaagccggttttgtgaggatgagttaggcctc 93735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 219
Target Start/End: Complemental strand, 27545207 - 27545121
Alignment:
Q  133 cacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttag 219  Q
    ||||||||||||| |||| |||||||||| || |  |||| || | ||||| |||||| |||  |||||||||||||||||||||||    
T  27545207 cacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaaaccggttttgtaaggatgagttag 27545121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 126 - 219
Target Start/End: Original strand, 29684017 - 29684110
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttag 219  Q
    |||||| | |||| ||||||||||| |||||||||| || |  |||| || | ||||| |||||| ||| ||||||||||||||||| ||||||    
T  29684017 caagtcccgcatcagatagacaagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggataagttag 29684110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 33986066 - 33985977
Alignment:
Q  133 cacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    ||||||||||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||| ||||| ||||    
T  33986066 cacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggaagagttgggcc 33985977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 93192 - 93140
Alignment:
Q  170 aagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||||| || || |||||| ||| |||||||||||||||||||||||||||    
T  93192 aagtgggggcactcctcaccttacaagccggttttgtaaggatgagttaggcc 93140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 10862314 - 10862417
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgat 227  Q
    |||| ||||||||||||| |||||| || ||||| || |  |||| || | || ||||||||  ||| ||| ||||||||| | ||||||||||||||||    
T  10862314 agtcccacatcggatagataagattttttagaagagtttataaagaggagacactcatcaccgtacaagccagttttgtaaaggtgagttaggcctcgat 10862413  T
Q  228 attc 231  Q
    ||||    
T  10862414 attc 10862417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 196 - 231
Target Start/End: Original strand, 39420773 - 39420808
Alignment:
Q  196 gccggttttgtaaggatgagttaggcctcgatattc 231  Q
    |||||||||||| |||||||||||||||||||||||    
T  39420773 gccggttttgtacggatgagttaggcctcgatattc 39420808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 171 - 221
Target Start/End: Complemental strand, 18607077 - 18607027
Alignment:
Q  171 agtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggc 221  Q
    ||||||| |||||||||||| | | ||||||||||||||||||| ||||||    
T  18607077 agtggggacaatcatcacctcaaaagccggttttgtaaggatgaattaggc 18607027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 33532832 - 33532722
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgat 227  Q
    |||| ||||||||||||| | ||||||||||||| || |  |||| || | || || |||||  ||| |||||||||||| || ||||||||| || |||    
T  33532832 agtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtagggttgagttaggtcttgat 33532733  T
Q  228 attcatgacac 238  Q
    |||| ||||||    
T  33532732 attcgtgacac 33532722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 901988 - 902025
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  901988 tcaccttacaagccggttttgtaaggatgagttaggcc 902025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 11969117 - 11969154
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  11969117 tcaccttacaagccggttttgtaaggatgagttaggcc 11969154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 21214240 - 21214203
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  21214240 tcaccttacaagccggttttgtaaggatgagttaggcc 21214203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 25286299 - 25286262
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  25286299 tcaccttacaagccggttttgtaaggatgagttaggcc 25286262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 237
Target Start/End: Complemental strand, 28193599 - 28193562
Alignment:
Q  200 gttttgtaaggatgagttaggcctcgatattcatgaca 237  Q
    |||||||||||||||||||| ||||||||||| |||||    
T  28193599 gttttgtaaggatgagttagacctcgatattcgtgaca 28193562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 42768373 - 42768336
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  42768373 tcaccttacaagccggttttgtaaggatgagttaggcc 42768336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 43195849 - 43195886
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  43195849 tcaccttacaagccggttttgtaaggatgagttaggcc 43195886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 93516 - 93468
Alignment:
Q  170 aagtggggtcaatcatcacctaacacgccggttttgtaaggatgagtta 218  Q
    |||||||| ||||| |||||| ||| ||||||||||| |||||||||||    
T  93516 aagtgggggcaatcctcacctcacaagccggttttgtgaggatgagtta 93468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 126 - 206
Target Start/End: Original strand, 10570941 - 10571021
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgt 206  Q
    |||||| |||||| |||||| |||| |||||||||| || |  ||||||| | ||||| |||||| ||| |||||||||||    
T  10570941 caagtcccacatcagatagataagactcttgagaagagtatataaagtggaggcaatcttcaccttacaagccggttttgt 10571021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 13839358 - 13839322
Alignment:
Q  125 tcaagtctcacatcggatagacaagattcttgagaag 161  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  13839358 tcaagtttcacatcggatagacaagactcttgagaag 13839322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 220
Target Start/End: Original strand, 25441728 - 25441796
Alignment:
Q  152 tcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttagg 220  Q
    |||||||||| || |  |||| |||| || || |||||| ||| |||||||||||||||||||||||||    
T  25441728 tcttgagaagagtttataaagagggggcactcctcaccttacaagccggttttgtaaggatgagttagg 25441796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 170 - 222
Target Start/End: Complemental strand, 37812567 - 37812515
Alignment:
Q  170 aagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||||| ||||| |||||| ||| | || ||||||||||||||||||||||    
T  37812567 aagtgggggcaatcctcacctcacaagtcgattttgtaaggatgagttaggcc 37812515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 5e-19; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 29273323 - 29273227
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||||||||||||||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||||||    
T  29273323 caagtcccacatcggatagacaagactcttgagaagagtttataaaggggaggcaatcctcaccttacaagccggttttgtaaggatgagttaggcc 29273227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 43361650 - 43361557
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttag 219  Q
    |||||| |||||||||||||||||| |||||||||| || |  |||| || | ||||| |||||| ||| ||||||||||||||||||||||||    
T  43361650 caagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagttag 43361557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 126 - 219
Target Start/End: Complemental strand, 43361855 - 43361762
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttag 219  Q
    |||||| |||||||||||||||||| |||||||||| || |  |||| ||   ||||| |||||| ||| ||||||||||||||||||||||||    
T  43361855 caagtcccacatcggatagacaagactcttgagaagagtttataaagaggaagcaatcctcaccttacaagccggttttgtaaggatgagttag 43361762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 15392031 - 15392127
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||||||||||||| |||| |||||||||| || |  |||| || | ||||| |||| | ||| |||||||||||||||||||||||||||    
T  15392031 caagtcccacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcactttacaagccggttttgtaaggatgagttaggcc 15392127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 238
Target Start/End: Original strand, 38474297 - 38474401
Alignment:
Q  134 acatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgatattcat 233  Q
    |||||||||||| | ||||||||| ||| || |  |||| || | || || |||||| ||| ||||||||||||||||||||||||||||  ||||||||    
T  38474297 acatcggatagataggattcttgacaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggcctttatattcat 38474396  T
Q  234 gacac 238  Q
    |||||    
T  38474397 gacac 38474401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 218
Target Start/End: Complemental strand, 39649182 - 39649090
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagtta 218  Q
    |||||| ||||||||||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||    
T  39649182 caagtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagtta 39649090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 218
Target Start/End: Complemental strand, 52846947 - 52846855
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagtta 218  Q
    |||||| ||||||||||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| |||||||||||||||||||||||    
T  52846947 caagtcccacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccggttttgtaaggatgagtta 52846855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 128 - 231
Target Start/End: Original strand, 17294986 - 17295089
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgat 227  Q
    |||| ||||||||||||| | ||||||||||||| || |  |||| || | || || |||||  ||| |||||||||||| |||||||||||||||||||    
T  17294986 agtcccacatcggatagataggattcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtagggatgagttaggcctcgat 17295085  T
Q  228 attc 231  Q
    ||||    
T  17295086 attc 17295089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 9381112 - 9381201
Alignment:
Q  133 cacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||||||||||||||| |||||||||| || |  |||| |  | ||||| |||||| ||| ||||| |||||||||||||||||||||    
T  9381112 cacatcggatagacaagactcttgagaagagtataaaaagagaaggcaatcctcaccttacaagccggctttgtaaggatgagttaggcc 9381201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 128 - 221
Target Start/End: Original strand, 11590428 - 11590521
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggc 221  Q
    |||| |||||||||||||||||| |||||||||| || |  |||| || | ||||| |||||| ||| ||||||||||| | ||||||||||||    
T  11590428 agtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcacctcacaagccggttttgtgatgatgagttaggc 11590521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 231
Target Start/End: Original strand, 29228461 - 29228559
Alignment:
Q  133 cacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcgatattc 231  Q
    ||||||||||||| | || |||||||||| || |  |||| || | || || |||||  ||| |||||||||||| |||||||||||||||||||||||    
T  29228461 cacatcggatagataggaatcttgagaagagtttataaagaggaggcactcctcaccgtacaagccggttttgtagggatgagttaggcctcgatattc 29228559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 15391832 - 15391921
Alignment:
Q  133 cacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    ||||||||||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| ||| ||||||||||||||||| |||||    
T  15391832 cacatcggatagataagactcttgagaagagtatataaagaggaggcaatcctcaccttacaagccagttttgtaaggatgagtaaggcc 15391921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 128 - 221
Target Start/End: Complemental strand, 19937139 - 19937046
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggc 221  Q
    |||| ||||||||||||| |  |||||||||||| || |  |||| || | || || |||||| ||| ||||||||||||||||||||||||||    
T  19937139 agtcccacatcggatagatagaattcttgagaagagtttataaagaggaggcactcctcaccttacaagccggttttgtaaggatgagttaggc 19937046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 29272952 - 29272907
Alignment:
Q  179 caatcatcacctaacacgccggttttgtaaggatgagttaggcctc 224  Q
    ||||| |||||| ||| |||||||||||||||||||||||||||||    
T  29272952 caatcctcaccttacaagccggttttgtaaggatgagttaggcctc 29272907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 199 - 231
Target Start/End: Original strand, 12287927 - 12287959
Alignment:
Q  199 ggttttgtaaggatgagttaggcctcgatattc 231  Q
    |||||||||||||||||||||||||||||||||    
T  12287927 ggttttgtaaggatgagttaggcctcgatattc 12287959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 218
Target Start/End: Complemental strand, 48558419 - 48558327
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagtta 218  Q
    |||||| || |||||||||| |||| |||||||||| || |  |||| ||   ||||| |||||| ||| |||||||||||||||||||||||    
T  48558419 caagtcccatatcggatagataagactcttgagaagagtatataaagaggaagcaatcctcaccttacaagccggttttgtaaggatgagtta 48558327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 227
Target Start/End: Original strand, 51722261 - 51722361
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaa-agtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctcga 226  Q
    |||| ||||||||||||| | ||||||||||||| || |  || || || | || || |||||  ||| |||||||||||||||||||||||||||||||    
T  51722261 agtcccacatcggatagataggattcttgagaagagtttataagagaggaggcactcctcaccgtacaagccggttttgtaaggatgagttaggcctcga 51722360  T
Q  227 t 227  Q
    |    
T  51722361 t 51722361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 127 - 222
Target Start/End: Complemental strand, 2997153 - 2997058
Alignment:
Q  127 aagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    ||||| ||||||||||||| || | |||||||||| || |  |||| || |  |||  |||||| ||| |||||||||||||||||||||||||||    
T  2997153 aagtcccacatcggatagataaaactcttgagaagagtatataaagaggaggtaatactcacctcacaagccggttttgtaaggatgagttaggcc 2997058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 179 - 222
Target Start/End: Complemental strand, 29273111 - 29273068
Alignment:
Q  179 caatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    ||||| |||||| ||| |||||||||||||||||||||||||||    
T  29273111 caatcctcaccttacaagccggttttgtaaggatgagttaggcc 29273068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 222
Target Start/End: Complemental strand, 4022221 - 4022127
Alignment:
Q  128 agtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||| ||||||||||||| | || |||||||||| || |  |||| || | || || |||||| ||| ||| |||||||||||||||||||||||    
T  4022221 agtcccacatcggatagataggactcttgagaagagtttataaagaggaggcactcctcaccttacaagccagttttgtaaggatgagttaggcc 4022127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 463122 - 463085
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  463122 tcaccttacaagccggttttgtaaggatgagttaggcc 463085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 2104299 - 2104262
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  2104299 tcaccttacaagccggttttgtaaggatgagttaggcc 2104262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 2997352 - 2997263
Alignment:
Q  133 cacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    ||||||||||||| |||| |||||||||| || |  ||||  | | ||||| |||||| | | ||||||||||||| |||||||||||||    
T  2997352 cacatcggatagataagactcttgagaagagtatataaagatgaggcaatcctcacctcataagccggttttgtaaagatgagttaggcc 2997263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 11149462 - 11149425
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  11149462 tcaccttacaagccggttttgtaaggatgagttaggcc 11149425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 20735587 - 20735624
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  20735587 tcaccttacaagccggttttgtaaggatgagttaggcc 20735624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 36332177 - 36332214
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||| |||||||||||||||||||||||||||    
T  36332177 tcaccttacaagccggttttgtaaggatgagttaggcc 36332214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 36332676 - 36332713
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||| ||||||||||||||||||||||||    
T  36332676 tcaccttacacgctggttttgtaaggatgagttaggcc 36332713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 43423292 - 43423381
Alignment:
Q  133 cacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    ||||||||||||| || | |||||||||| || |  |||| || | || || |||||| ||| ||| |||||||||||||||||||||||    
T  43423292 cacatcggatagataacactcttgagaagagtttataaagaggaggcactcctcaccttacaagccagttttgtaaggatgagttaggcc 43423381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 185 - 221
Target Start/End: Original strand, 31305776 - 31305812
Alignment:
Q  185 tcacctaacacgccggttttgtaaggatgagttaggc 221  Q
    |||||| ||| ||||||||||||||||||||||||||    
T  31305776 tcaccttacaagccggttttgtaaggatgagttaggc 31305812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 126 - 224
Target Start/End: Complemental strand, 21361 - 21263
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcctc 224  Q
    |||||| |||||||||||||||||| |||||||||| || |  |||| || | ||||| |||||| ||| |  ||||||||||||||||||||||||||    
T  21361 caagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagttggttttgtaaggatgagttaggcctc 21263  T

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Target: scaffold0434 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 133 - 222
Target Start/End: Original strand, 13319 - 13408
Alignment:
Q  133 cacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||||||||||||||| |||||||||| || |  |||| || | ||||| |||||| ||| ||||||||||| |||||||||||||||    
T  13319 cacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtgaggatgagttaggcc 13408  T

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Target: scaffold0434; HSP #2
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 13519 - 13615
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| || ||||||||||||||| |||||||||| || |  |||| || | ||||| |||||| ||| ||||||||||  |||||||||||||||    
T  13519 caagtcccaaatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgcgaggatgagttaggcc 13615  T

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Target: scaffold0989 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 3045 - 2949
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| |||||||||||||||||| |||||||||| || |  |||| || | ||||| |||| | ||| || ||||||||||||||||||||||||    
T  3045 caagtcccacatcggatagacaagactcttgagaagagtttataaagaggaggcaatcctcactttacaagctggttttgtaaggatgagttaggcc 2949  T

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Target: scaffold0029 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 126 - 222
Target Start/End: Original strand, 76858 - 76954
Alignment:
Q  126 caagtctcacatcggatagacaagattcttgagaagggtctggaaagtggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    |||||| ||||||||||||| |||| |||||||||| || |  |||| || | ||||| |||||| ||| ||||||||||||| |||||||||||||    
T  76858 caagtcccacatcggatagataagactcttgagaagagtttataaagaggaggcaatcctcaccttacaagccggttttgtaaagatgagttaggcc 76954  T

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Target: scaffold0060 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 222
Target Start/End: Original strand, 20593 - 20642
Alignment:
Q  173 tggggtcaatcatcacctaacacgccggttttgtaaggatgagttaggcc 222  Q
    ||||| ||||| |||||| ||| || ||||||||||||||||||||||||    
T  20593 tgggggcaatcctcaccttacaagctggttttgtaaggatgagttaggcc 20642  T

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