View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14038_low_28 (Length: 313)
Name: NF14038_low_28
Description: NF14038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14038_low_28 |
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Alignment Details
Target: chr7 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 1 - 296
Target Start/End: Complemental strand, 45703592 - 45703297
Alignment:
| Q |
1 |
ccacttgatgaatgaaaattaacattttaaaatgtgtgagatgtatgcatatgagagataggtaaccaaagagtttttggtctgaagttgtgagtacatc |
100 |
Q |
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| T |
45703592 |
ccacttgatgaatgaaaattaacattttaaaatgtgtgagatgtatgcatatgagagataggtaaccaaagagtttcaggtctgaagttgtgagtacatc |
45703493 |
T |
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| Q |
101 |
aacgtaattgatcaatagaagtctgtcaacacaacttcaagagaactatgaatgtttggagtggaaaaccaacaaactgctataatttcaaagttttcat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
45703492 |
aacgtaattgatcaatagaagtctgtcaacacaacttcaagagaactatgaatgtttggagtggaaaaccaacaaactgctataatttcaaagttttcat |
45703393 |
T |
|
| Q |
201 |
aactttggcgttcatgcatatcaagcaagaaaagattgatggtagggttgtaaaacgtgccttctttaatttggttatattgaacgagcaagaatt |
296 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
45703392 |
aactttggcgttcatgcatatcaagcaagaaaagattgatggtagggttgtaaaacgtgtcttctttaatttggttatattgaacgagcaagaatt |
45703297 |
T |
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