View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14038_low_6 (Length: 589)

Name: NF14038_low_6
Description: NF14038
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14038_low_6
NF14038_low_6
[»] chr1 (102 HSPs)
chr1 (211-589)||(10233276-10233656)
chr1 (137-266)||(49938734-49938864)
chr1 (159-288)||(2295106-2295235)
chr1 (129-288)||(3233946-3234106)
chr1 (129-264)||(24915006-24915142)
chr1 (129-271)||(27976574-27976725)
chr1 (132-288)||(1432497-1432654)
chr1 (129-288)||(14576585-14576744)
chr1 (162-241)||(15477578-15477657)
chr1 (129-241)||(17603362-17603475)
chr1 (159-288)||(29904761-29904890)
chr1 (129-288)||(6556950-6557111)
chr1 (130-265)||(51688685-51688823)
chr1 (129-288)||(13809977-13810137)
chr1 (129-239)||(30286499-30286611)
chr1 (192-288)||(38001639-38001734)
chr1 (159-261)||(3887590-3887692)
chr1 (159-288)||(5720935-5721064)
chr1 (130-239)||(37631539-37631649)
chr1 (164-249)||(37473418-37473503)
chr1 (129-288)||(473143-473302)
chr1 (137-280)||(14331970-14332112)
chr1 (128-266)||(27970247-27970387)
chr1 (216-288)||(50644186-50644258)
chr1 (131-262)||(51929496-51929628)
chr1 (132-266)||(2777874-2778008)
chr1 (163-258)||(51695456-51695551)
chr1 (159-288)||(5741616-5741745)
chr1 (163-261)||(7941620-7941718)
chr1 (148-288)||(37842287-37842427)
chr1 (494-542)||(16297223-16297271)
chr1 (167-286)||(7069434-7069553)
chr1 (129-251)||(41195162-41195284)
chr1 (493-535)||(7918155-7918197)
chr1 (162-260)||(27820156-27820253)
chr1 (196-266)||(37517119-37517189)
chr1 (163-248)||(7136970-7137054)
chr1 (177-266)||(27145689-27145777)
chr1 (231-288)||(33204325-33204382)
chr1 (137-247)||(40977375-40977487)
chr1 (129-241)||(41184628-41184741)
chr1 (493-541)||(2218298-2218346)
chr1 (440-484)||(32047023-32047067)
chr1 (134-267)||(36872716-36872846)
chr1 (136-227)||(42174841-42174933)
chr1 (494-542)||(42359391-42359439)
chr1 (220-271)||(9572049-9572100)
chr1 (191-266)||(11941304-11941379)
chr1 (162-288)||(33186318-33186445)
chr1 (166-241)||(38503443-38503518)
chr1 (493-540)||(40258874-40258921)
chr1 (495-541)||(11634066-11634112)
chr1 (159-281)||(27146193-27146315)
chr1 (216-277)||(489257-489318)
chr1 (159-252)||(5709637-5709729)
chr1 (163-248)||(10744315-10744399)
chr1 (133-260)||(12287151-12287279)
chr1 (130-226)||(27820330-27820427)
chr1 (129-214)||(47432075-47432160)
chr1 (497-541)||(1209823-1209867)
chr1 (493-541)||(6427545-6427593)
chr1 (493-541)||(9828125-9828173)
chr1 (163-247)||(10199381-10199464)
chr1 (219-287)||(38247397-38247465)
chr1 (493-541)||(40917830-40917878)
chr1 (494-541)||(1486646-1486693)
chr1 (196-259)||(10666772-10666834)
chr1 (216-259)||(12763389-12763432)
chr1 (171-258)||(31517702-31517788)
chr1 (183-242)||(36872299-36872358)
chr1 (131-185)||(39596578-39596633)
chr1 (210-249)||(41505745-41505784)
chr1 (163-253)||(5591933-5592022)
chr1 (184-266)||(7119891-7119972)
chr1 (493-535)||(22947806-22947848)
chr1 (138-247)||(34290224-34290333)
chr1 (163-241)||(45975704-45975782)
chr1 (132-201)||(49888749-49888819)
chr1 (164-241)||(10280664-10280740)
chr1 (243-288)||(15784411-15784456)
chr1 (493-538)||(16812629-16812674)
chr1 (493-538)||(21365993-21366038)
chr1 (493-538)||(22515828-22515873)
chr1 (181-242)||(36872458-36872519)
chr1 (204-261)||(37617423-37617480)
chr1 (386-435)||(40663760-40663809)
chr1 (196-289)||(42575399-42575492)
chr1 (147-286)||(43230705-43230843)
chr1 (133-248)||(1509734-1509850)
chr1 (498-534)||(13011172-13011208)
chr1 (493-541)||(17408772-17408820)
chr1 (505-541)||(18190061-18190097)
chr1 (493-541)||(19562557-19562604)
chr1 (493-541)||(20157285-20157333)
chr1 (497-541)||(26830657-26830701)
chr1 (493-541)||(29144321-29144369)
chr1 (216-288)||(36514607-36514679)
chr1 (493-541)||(37598901-37598949)
chr1 (228-288)||(39976141-39976201)
chr1 (163-259)||(43338130-43338225)
chr1 (493-541)||(46940749-46940797)
chr1 (216-288)||(51190905-51190977)
[»] chr7 (83 HSPs)
chr7 (82-281)||(33601965-33602166)
chr7 (129-287)||(33601342-33601500)
chr7 (129-288)||(19302494-19302650)
chr7 (130-288)||(27863656-27863815)
chr7 (129-280)||(17944282-17944434)
chr7 (129-288)||(48470023-48470183)
chr7 (132-281)||(34744010-34744160)
chr7 (132-259)||(420342-420470)
chr7 (159-266)||(21568448-21568555)
chr7 (163-288)||(34035931-34036056)
chr7 (129-280)||(19022524-19022676)
chr7 (129-243)||(30570907-30571022)
chr7 (159-288)||(11619089-11619218)
chr7 (129-241)||(39967899-39968012)
chr7 (128-271)||(45593505-45593650)
chr7 (163-253)||(38499879-38499969)
chr7 (163-287)||(36517593-36517715)
chr7 (129-288)||(46280211-46280363)
chr7 (135-280)||(49019853-49020000)
chr7 (191-281)||(35056717-35056807)
chr7 (191-288)||(5947283-5947380)
chr7 (150-266)||(19214359-19214476)
chr7 (129-259)||(17248534-17248662)
chr7 (129-260)||(20526425-20526557)
chr7 (205-261)||(27288003-27288059)
chr7 (493-541)||(32287404-32287452)
chr7 (129-223)||(48507701-48507797)
chr7 (493-544)||(1433526-1433577)
chr7 (131-288)||(4970723-4970882)
chr7 (159-233)||(39629943-39630017)
chr7 (493-541)||(5409772-5409820)
chr7 (163-247)||(5947198-5947282)
chr7 (205-261)||(22940014-22940070)
chr7 (493-541)||(29763130-29763178)
chr7 (493-540)||(21880223-21880270)
chr7 (159-246)||(28614443-28614530)
chr7 (129-224)||(45338428-45338523)
chr7 (128-252)||(3308218-3308344)
chr7 (162-251)||(3836652-3836739)
chr7 (169-230)||(20428494-20428555)
chr7 (198-287)||(34464153-34464242)
chr7 (493-554)||(35749944-35750005)
chr7 (493-541)||(598278-598326)
chr7 (493-541)||(6490786-6490834)
chr7 (493-541)||(7133213-7133261)
chr7 (493-541)||(9778575-9778623)
chr7 (493-541)||(17852070-17852118)
chr7 (231-287)||(18765366-18765422)
chr7 (493-541)||(30813867-30813915)
chr7 (493-541)||(43027405-43027453)
chr7 (497-541)||(43250074-43250118)
chr7 (161-253)||(48131565-48131656)
chr7 (493-540)||(1401094-1401141)
chr7 (177-260)||(20526888-20526971)
chr7 (133-223)||(38138475-38138566)
chr7 (499-541)||(18215144-18215186)
chr7 (229-287)||(18962515-18962573)
chr7 (147-224)||(28341052-28341129)
chr7 (494-540)||(28943351-28943397)
chr7 (163-253)||(30535577-30535666)
chr7 (216-254)||(33552817-33552855)
chr7 (129-266)||(33678759-33678897)
chr7 (493-535)||(35862027-35862069)
chr7 (129-288)||(37064399-37064555)
chr7 (159-241)||(45790404-45790485)
chr7 (177-266)||(3927963-3928052)
chr7 (220-261)||(14768395-14768436)
chr7 (493-538)||(24339726-24339771)
chr7 (503-544)||(27093364-27093405)
chr7 (503-544)||(27184896-27184937)
chr7 (177-233)||(28900903-28900960)
chr7 (129-237)||(39279941-39280050)
chr7 (129-201)||(39907782-39907855)
chr7 (129-188)||(7467588-7467648)
chr7 (493-541)||(14729773-14729821)
chr7 (128-171)||(20234461-20234505)
chr7 (493-541)||(21138932-21138980)
chr7 (493-541)||(28155624-28155672)
chr7 (496-540)||(40287306-40287350)
chr7 (162-238)||(43250681-43250756)
chr7 (129-188)||(43694601-43694661)
chr7 (163-266)||(44989630-44989734)
chr7 (453-489)||(46781691-46781727)
[»] chr8 (69 HSPs)
chr8 (129-281)||(26771244-26771397)
chr8 (128-277)||(38648329-38648479)
chr8 (129-288)||(10758188-10758347)
chr8 (129-288)||(27028810-27028970)
chr8 (134-288)||(30251385-30251540)
chr8 (129-261)||(18133635-18133768)
chr8 (129-288)||(35534544-35534702)
chr8 (159-288)||(12976223-12976351)
chr8 (169-288)||(1058008-1058126)
chr8 (131-264)||(29168012-29168146)
chr8 (163-288)||(31716158-31716283)
chr8 (131-269)||(6881908-6882047)
chr8 (198-267)||(28763417-28763486)
chr8 (176-288)||(35643919-35644031)
chr8 (128-241)||(25930531-25930646)
chr8 (163-281)||(35749508-35749626)
chr8 (182-247)||(8146362-8146427)
chr8 (176-252)||(10120783-10120859)
chr8 (493-541)||(29510234-29510282)
chr8 (163-278)||(1930049-1930164)
chr8 (161-280)||(43045664-43045783)
chr8 (191-281)||(32840924-32841014)
chr8 (129-247)||(37945576-37945694)
chr8 (163-288)||(43717865-43717993)
chr8 (129-241)||(16825516-16825628)
chr8 (129-241)||(29205787-29205899)
chr8 (199-288)||(36963285-36963374)
chr8 (493-541)||(36450695-36450743)
chr8 (159-261)||(16347200-16347303)
chr8 (493-544)||(22652054-22652105)
chr8 (493-544)||(29447040-29447091)
chr8 (205-288)||(40859714-40859796)
chr8 (494-541)||(44067597-44067644)
chr8 (493-542)||(30067969-30068018)
chr8 (493-542)||(40064031-40064080)
chr8 (176-249)||(42893460-42893533)
chr8 (496-544)||(4498370-4498418)
chr8 (150-241)||(9956792-9956884)
chr8 (493-541)||(38487158-38487206)
chr8 (204-288)||(40981159-40981243)
chr8 (493-544)||(8343034-8343085)
chr8 (148-258)||(12782146-12782257)
chr8 (147-249)||(13958054-13958156)
chr8 (493-544)||(16641910-16641961)
chr8 (493-540)||(18407790-18407837)
chr8 (493-544)||(29447522-29447573)
chr8 (204-287)||(41589641-41589724)
chr8 (129-187)||(42043377-42043436)
chr8 (132-241)||(10114471-10114581)
chr8 (494-544)||(16987980-16988030)
chr8 (216-266)||(27754470-27754520)
chr8 (159-249)||(33808313-33808403)
chr8 (493-535)||(34127173-34127215)
chr8 (496-541)||(5813662-5813707)
chr8 (191-240)||(10383927-10383975)
chr8 (216-288)||(11376769-11376842)
chr8 (493-538)||(15816059-15816104)
chr8 (159-252)||(43504761-43504853)
chr8 (493-541)||(2035818-2035866)
chr8 (191-243)||(3254267-3254318)
chr8 (493-541)||(8343397-8343445)
chr8 (137-188)||(11861791-11861843)
chr8 (497-541)||(12570443-12570487)
chr8 (497-541)||(12570669-12570713)
chr8 (181-241)||(13459677-13459736)
chr8 (493-541)||(14134769-14134817)
chr8 (493-537)||(17751730-17751774)
chr8 (493-537)||(17760717-17760761)
chr8 (191-251)||(42215275-42215334)
[»] chr5 (79 HSPs)
chr5 (129-288)||(16937814-16937974)
chr5 (129-261)||(16457937-16458070)
chr5 (128-288)||(10639931-10640092)
chr5 (130-288)||(40426745-40426904)
chr5 (129-261)||(29925820-29925953)
chr5 (175-251)||(3735126-3735202)
chr5 (159-287)||(12857637-12857765)
chr5 (132-261)||(32009674-32009805)
chr5 (129-247)||(39105443-39105562)
chr5 (191-288)||(6521119-6521217)
chr5 (162-271)||(42500191-42500298)
chr5 (159-287)||(12857270-12857398)
chr5 (137-288)||(43300865-43301017)
chr5 (133-251)||(25461074-25461193)
chr5 (129-253)||(2568636-2568761)
chr5 (148-253)||(1464986-1465091)
chr5 (159-288)||(9107100-9107229)
chr5 (163-288)||(9202679-9202804)
chr5 (163-287)||(15246847-15246971)
chr5 (176-260)||(32859679-32859762)
chr5 (176-260)||(32861851-32861934)
chr5 (205-281)||(32942650-32942726)
chr5 (164-288)||(35445775-35445898)
chr5 (150-288)||(11700163-11700301)
chr5 (493-540)||(19820329-19820376)
chr5 (163-277)||(7984983-7985097)
chr5 (159-253)||(37954696-37954790)
chr5 (163-288)||(7674662-7674786)
chr5 (163-288)||(7705929-7706054)
chr5 (132-251)||(6587076-6587195)
chr5 (228-288)||(15015922-15015982)
chr5 (493-541)||(30098407-30098455)
chr5 (176-260)||(32862635-32862718)
chr5 (129-288)||(12425550-12425712)
chr5 (493-540)||(38464314-38464361)
chr5 (163-279)||(4014362-4014480)
chr5 (204-253)||(3520632-3520681)
chr5 (163-276)||(19460330-19460442)
chr5 (176-240)||(34669708-34669773)
chr5 (176-241)||(35446082-35446147)
chr5 (217-266)||(39248166-39248215)
chr5 (495-544)||(39268541-39268590)
chr5 (223-288)||(39594881-39594946)
chr5 (195-288)||(41419365-41419458)
chr5 (493-541)||(2419937-2419985)
chr5 (493-541)||(2436981-2437029)
chr5 (493-541)||(14873592-14873640)
chr5 (493-541)||(32766873-32766921)
chr5 (225-288)||(32941545-32941609)
chr5 (167-243)||(42646685-42646761)
chr5 (493-541)||(42893430-42893478)
chr5 (191-246)||(706505-706560)
chr5 (206-241)||(2973522-2973557)
chr5 (191-266)||(7808547-7808622)
chr5 (500-547)||(17088355-17088402)
chr5 (493-540)||(19552477-19552524)
chr5 (494-541)||(21190998-21191045)
chr5 (198-281)||(31038333-31038416)
chr5 (198-281)||(31047557-31047640)
chr5 (493-544)||(39698619-39698670)
chr5 (217-288)||(41534506-41534577)
chr5 (493-544)||(43564948-43564999)
chr5 (216-250)||(499701-499735)
chr5 (204-278)||(6096602-6096676)
chr5 (164-254)||(29845401-29845489)
chr5 (159-233)||(39477893-39477967)
chr5 (216-254)||(42646957-42646995)
chr5 (150-267)||(13697711-13697828)
chr5 (149-241)||(17368675-17368767)
chr5 (220-261)||(17560173-17560214)
chr5 (209-278)||(32372672-32372741)
chr5 (224-261)||(41981661-41981698)
chr5 (163-238)||(3280696-3280771)
chr5 (493-541)||(21576686-21576734)
chr5 (219-251)||(24030144-24030176)
chr5 (505-541)||(26312839-26312875)
chr5 (194-246)||(32022116-32022168)
chr5 (493-541)||(35017113-35017161)
chr5 (494-534)||(43001882-43001922)
[»] chr3 (83 HSPs)
chr3 (137-287)||(18405763-18405914)
chr3 (129-281)||(30443872-30444025)
chr3 (128-276)||(53789406-53789553)
chr3 (129-288)||(20880455-20880615)
chr3 (129-286)||(402475-402633)
chr3 (129-281)||(39980708-39980861)
chr3 (129-266)||(21367646-21367784)
chr3 (163-288)||(34610737-34610862)
chr3 (196-288)||(31365119-31365211)
chr3 (159-288)||(24085269-24085398)
chr3 (129-288)||(584025-584185)
chr3 (129-288)||(13715503-13715665)
chr3 (129-240)||(36631030-36631142)
chr3 (163-282)||(466207-466326)
chr3 (129-251)||(20170502-20170625)
chr3 (163-258)||(45541585-45541679)
chr3 (149-286)||(22203429-22203566)
chr3 (129-260)||(20257514-20257647)
chr3 (129-248)||(46778162-46778281)
chr3 (159-250)||(901934-902025)
chr3 (177-288)||(9832686-9832797)
chr3 (163-281)||(3845501-3845618)
chr3 (131-288)||(37689212-37689368)
chr3 (191-280)||(37795637-37795726)
chr3 (493-544)||(34185053-34185104)
chr3 (216-258)||(24624276-24624318)
chr3 (129-260)||(31365268-31365391)
chr3 (129-221)||(35959454-35959547)
chr3 (163-288)||(39602142-39602266)
chr3 (222-267)||(43046738-43046783)
chr3 (147-227)||(46478684-46478767)
chr3 (494-541)||(24204983-24205030)
chr3 (494-541)||(25775577-25775624)
chr3 (166-281)||(38902083-38902197)
chr3 (191-277)||(42799909-42799993)
chr3 (163-241)||(46031004-46031082)
chr3 (128-209)||(47132309-47132391)
chr3 (191-241)||(49556900-49556950)
chr3 (493-542)||(1389907-1389956)
chr3 (191-288)||(26878242-26878339)
chr3 (493-538)||(49651717-49651762)
chr3 (216-253)||(54837001-54837038)
chr3 (178-258)||(944591-944671)
chr3 (129-232)||(4401026-4401127)
chr3 (493-541)||(11610579-11610627)
chr3 (493-541)||(18427019-18427067)
chr3 (493-541)||(25074865-25074913)
chr3 (493-541)||(27505321-27505369)
chr3 (493-541)||(40052382-40052430)
chr3 (129-196)||(44061046-44061114)
chr3 (493-541)||(52369857-52369905)
chr3 (493-541)||(55401145-55401193)
chr3 (494-541)||(4987222-4987269)
chr3 (493-540)||(20503536-20503583)
chr3 (493-528)||(21861658-21861693)
chr3 (191-262)||(26911627-26911698)
chr3 (162-233)||(28795839-28795910)
chr3 (162-277)||(37389196-37389311)
chr3 (493-540)||(40993276-40993323)
chr3 (129-287)||(46886624-46886783)
chr3 (495-541)||(12100339-12100385)
chr3 (129-186)||(30956659-30956717)
chr3 (129-186)||(30972471-30972529)
chr3 (163-201)||(33883768-33883806)
chr3 (499-540)||(3631755-3631796)
chr3 (247-288)||(5448542-5448583)
chr3 (492-541)||(15999950-15999999)
chr3 (493-542)||(16789586-16789635)
chr3 (493-554)||(17276784-17276845)
chr3 (494-527)||(40150527-40150560)
chr3 (218-251)||(47904049-47904082)
chr3 (497-541)||(1509637-1509681)
chr3 (493-533)||(3730109-3730149)
chr3 (493-541)||(14216973-14217021)
chr3 (493-541)||(14223102-14223150)
chr3 (496-528)||(21256952-21256984)
chr3 (216-288)||(24684753-24684825)
chr3 (209-261)||(34034158-34034210)
chr3 (216-288)||(34235024-34235096)
chr3 (220-260)||(34637944-34637984)
chr3 (492-540)||(37077441-37077489)
chr3 (493-541)||(41961580-41961628)
chr3 (209-261)||(42545356-42545408)
[»] chr4 (90 HSPs)
chr4 (129-288)||(17822796-17822956)
chr4 (134-287)||(21731588-21731742)
chr4 (165-280)||(13126515-13126630)
chr4 (162-288)||(25904154-25904280)
chr4 (129-261)||(50681047-50681180)
chr4 (159-288)||(54426053-54426182)
chr4 (129-279)||(53294054-53294205)
chr4 (158-288)||(29657393-29657523)
chr4 (159-266)||(30668321-30668426)
chr4 (137-266)||(22030190-22030320)
chr4 (159-288)||(26796-26924)
chr4 (134-277)||(2244032-2244179)
chr4 (129-288)||(27043761-27043921)
chr4 (165-288)||(24169279-24169402)
chr4 (159-261)||(39603128-39603230)
chr4 (191-288)||(41336802-41336899)
chr4 (137-233)||(55414406-55414503)
chr4 (493-541)||(3947702-3947750)
chr4 (196-288)||(15173234-15173326)
chr4 (176-260)||(21523585-21523668)
chr4 (129-288)||(29388593-29388753)
chr4 (137-250)||(46588042-46588157)
chr4 (159-250)||(46592178-46592269)
chr4 (131-236)||(7839344-7839450)
chr4 (182-288)||(49003806-49003912)
chr4 (140-241)||(50662716-50662818)
chr4 (493-542)||(18513176-18513225)
chr4 (191-280)||(49939890-49939979)
chr4 (163-288)||(52315128-52315253)
chr4 (133-288)||(35571562-35571718)
chr4 (191-266)||(56249566-56249640)
chr4 (129-261)||(25332753-25332887)
chr4 (169-251)||(55064855-55064937)
chr4 (143-266)||(40830982-40831106)
chr4 (493-538)||(53381531-53381576)
chr4 (129-269)||(54069367-54069508)
chr4 (163-280)||(55302263-55302380)
chr4 (493-541)||(23292927-23292975)
chr4 (204-288)||(42403954-42404037)
chr4 (131-253)||(2996554-2996676)
chr4 (493-540)||(11931362-11931409)
chr4 (135-209)||(16199991-16200066)
chr4 (493-540)||(17876237-17876284)
chr4 (494-541)||(22440559-22440606)
chr4 (148-266)||(49202643-49202762)
chr4 (163-277)||(1706636-1706750)
chr4 (493-535)||(40784029-40784071)
chr4 (132-241)||(41512633-41512743)
chr4 (129-261)||(20108988-20109121)
chr4 (495-589)||(28084545-28084640)
chr4 (493-541)||(941315-941363)
chr4 (493-541)||(19482749-19482797)
chr4 (493-541)||(22234820-22234868)
chr4 (493-541)||(24343583-24343631)
chr4 (129-241)||(37863933-37864043)
chr4 (493-541)||(40965341-40965389)
chr4 (493-541)||(42640594-42640642)
chr4 (493-540)||(715546-715593)
chr4 (493-540)||(752872-752919)
chr4 (190-260)||(3069932-3070003)
chr4 (493-540)||(11596298-11596345)
chr4 (179-286)||(23459658-23459764)
chr4 (204-279)||(25903860-25903934)
chr4 (191-254)||(43886097-43886159)
chr4 (221-288)||(49940098-49940165)
chr4 (217-288)||(55437144-55437215)
chr4 (163-232)||(1407970-1408040)
chr4 (492-542)||(17425347-17425397)
chr4 (175-241)||(20109611-20109677)
chr4 (216-266)||(20719770-20719820)
chr4 (163-281)||(22662024-22662142)
chr4 (163-281)||(22666503-22666621)
chr4 (138-251)||(29912936-29913049)
chr4 (225-287)||(40174633-40174695)
chr4 (198-288)||(43505984-43506074)
chr4 (459-488)||(1338301-1338330)
chr4 (492-541)||(30982807-30982856)
chr4 (441-485)||(41107-41151)
chr4 (493-541)||(944603-944651)
chr4 (493-541)||(2361916-2361964)
chr4 (497-541)||(3712458-3712502)
chr4 (492-528)||(4383449-4383485)
chr4 (509-541)||(10133779-10133811)
chr4 (129-188)||(15177233-15177293)
chr4 (493-521)||(23386248-23386276)
chr4 (493-541)||(24613631-24613679)
chr4 (163-243)||(28614785-28614864)
chr4 (497-541)||(30838291-30838335)
chr4 (493-541)||(35161106-35161154)
chr4 (215-251)||(39178235-39178271)
[»] chr2 (88 HSPs)
chr2 (129-281)||(41851514-41851667)
chr2 (129-287)||(15757590-15757750)
chr2 (129-281)||(45229491-45229643)
chr2 (129-287)||(1625879-1626038)
chr2 (131-280)||(43279466-43279616)
chr2 (129-250)||(41812061-41812181)
chr2 (129-280)||(18066107-18066259)
chr2 (158-288)||(750679-750809)
chr2 (129-281)||(39659447-39659600)
chr2 (129-261)||(41241091-41241223)
chr2 (159-267)||(7035519-7035627)
chr2 (167-258)||(33981140-33981231)
chr2 (132-253)||(5745751-5745873)
chr2 (167-288)||(7928229-7928351)
chr2 (147-288)||(26202025-26202167)
chr2 (163-261)||(41293121-41293219)
chr2 (129-276)||(12464416-12464564)
chr2 (176-288)||(15305701-15305813)
chr2 (204-280)||(30331806-30331882)
chr2 (169-288)||(31561673-31561792)
chr2 (129-247)||(32592566-32592684)
chr2 (163-288)||(4606939-4607064)
chr2 (175-288)||(13325596-13325709)
chr2 (129-288)||(2416292-2416452)
chr2 (137-288)||(20952342-20952494)
chr2 (493-540)||(18840954-18841001)
chr2 (129-258)||(33319775-33319903)
chr2 (209-288)||(42419853-42419932)
chr2 (216-258)||(5902511-5902553)
chr2 (205-255)||(28677624-28677673)
chr2 (179-288)||(449877-449986)
chr2 (128-267)||(12289774-12289915)
chr2 (164-253)||(16451133-16451222)
chr2 (156-253)||(33192209-33192304)
chr2 (198-266)||(24100977-24101045)
chr2 (493-541)||(37419824-37419872)
chr2 (163-271)||(40682343-40682450)
chr2 (216-288)||(42659142-42659214)
chr2 (493-560)||(18622654-18622720)
chr2 (162-241)||(20926516-20926594)
chr2 (163-281)||(26143580-26143696)
chr2 (129-251)||(26626852-26626975)
chr2 (493-544)||(44860398-44860449)
chr2 (494-540)||(2438661-2438707)
chr2 (143-288)||(9174808-9174954)
chr2 (191-277)||(19608575-19608661)
chr2 (216-250)||(40776067-40776101)
chr2 (216-258)||(44606072-44606114)
chr2 (162-243)||(1647249-1647329)
chr2 (493-542)||(10535686-10535735)
chr2 (160-277)||(10619162-10619279)
chr2 (219-288)||(27317449-27317518)
chr2 (129-253)||(36114398-36114523)
chr2 (129-237)||(40279176-40279285)
chr2 (177-241)||(2227194-2227258)
chr2 (162-269)||(12194965-12195073)
chr2 (493-541)||(26769592-26769640)
chr2 (493-541)||(28596539-28596587)
chr2 (162-266)||(36534781-36534885)
chr2 (493-541)||(38117100-38117148)
chr2 (181-241)||(43570446-43570505)
chr2 (493-540)||(11223794-11223841)
chr2 (493-544)||(24975256-24975307)
chr2 (129-242)||(41407280-41407395)
chr2 (215-281)||(7043668-7043734)
chr2 (494-544)||(19942332-19942382)
chr2 (205-247)||(20933787-20933829)
chr2 (133-289)||(29628672-29628830)
chr2 (220-258)||(32837393-32837431)
chr2 (191-249)||(33503049-33503106)
chr2 (198-288)||(38916240-38916330)
chr2 (222-268)||(44590097-44590143)
chr2 (216-249)||(1801734-1801767)
chr2 (129-253)||(23955999-23956120)
chr2 (164-241)||(23974471-23974547)
chr2 (216-253)||(32106766-32106803)
chr2 (174-251)||(43529827-43529903)
chr2 (191-251)||(787374-787433)
chr2 (177-253)||(11863929-11864005)
chr2 (493-541)||(15972943-15972991)
chr2 (462-490)||(28122105-28122133)
chr2 (216-252)||(29430824-29430860)
chr2 (216-288)||(31744365-31744437)
chr2 (557-589)||(36409631-36409663)
chr2 (493-541)||(37559047-37559095)
chr2 (129-224)||(39073684-39073780)
chr2 (163-271)||(42457962-42458070)
chr2 (493-541)||(42511323-42511371)
[»] chr6 (52 HSPs)
chr6 (132-271)||(20368129-20368268)
chr6 (131-233)||(34430447-34430550)
chr6 (182-266)||(848022-848106)
chr6 (163-271)||(31813175-31813283)
chr6 (493-554)||(31959207-31959268)
chr6 (163-233)||(9763574-9763644)
chr6 (132-271)||(6536597-6536734)
chr6 (141-285)||(24982696-24982841)
chr6 (208-253)||(30926578-30926623)
chr6 (176-279)||(9912131-9912234)
chr6 (177-288)||(34430743-34430853)
chr6 (132-250)||(35099019-35099137)
chr6 (495-541)||(8389411-8389457)
chr6 (129-253)||(2735048-2735173)
chr6 (129-237)||(9093538-9093647)
chr6 (493-542)||(9107300-9107349)
chr6 (167-244)||(31624108-31624184)
chr6 (493-541)||(8776909-8776957)
chr6 (217-269)||(10645335-10645387)
chr6 (493-541)||(34595204-34595252)
chr6 (161-241)||(35070628-35070708)
chr6 (162-287)||(2455004-2455126)
chr6 (129-199)||(6909892-6909963)
chr6 (129-243)||(18076175-18076297)
chr6 (129-259)||(24626274-24626397)
chr6 (238-288)||(35069543-35069593)
chr6 (218-259)||(26559200-26559241)
chr6 (216-288)||(33089572-33089645)
chr6 (211-271)||(160911-160971)
chr6 (216-280)||(30536570-30536634)
chr6 (176-288)||(34910340-34910452)
chr6 (191-258)||(769180-769246)
chr6 (493-540)||(4878014-4878060)
chr6 (493-544)||(7248436-7248487)
chr6 (493-544)||(10294185-10294236)
chr6 (493-540)||(10339055-10339102)
chr6 (493-544)||(17841530-17841581)
chr6 (191-266)||(19411502-19411577)
chr6 (493-540)||(34894969-34895016)
chr6 (495-541)||(9025448-9025494)
chr6 (493-539)||(16833380-16833426)
chr6 (129-201)||(837234-837307)
chr6 (216-288)||(31624324-31624399)
chr6 (493-541)||(7938170-7938218)
chr6 (493-541)||(8365449-8365497)
chr6 (557-589)||(8805576-8805608)
chr6 (493-541)||(16766778-16766826)
chr6 (493-541)||(17327591-17327639)
chr6 (493-541)||(28152168-28152216)
chr6 (493-541)||(31385000-31385048)
chr6 (194-258)||(32976023-32976086)
chr6 (216-288)||(34404657-34404729)
[»] scaffold0652 (1 HSPs)
scaffold0652 (493-541)||(403-451)
[»] scaffold0057 (2 HSPs)
scaffold0057 (216-287)||(24688-24759)
scaffold0057 (231-288)||(44115-44172)
[»] scaffold0221 (1 HSPs)
scaffold0221 (163-280)||(22245-22362)
[»] scaffold0050 (1 HSPs)
scaffold0050 (163-236)||(58756-58829)
[»] scaffold0128 (1 HSPs)
scaffold0128 (493-543)||(32772-32822)
[»] scaffold0020 (1 HSPs)
scaffold0020 (493-541)||(135264-135312)
[»] scaffold0004 (1 HSPs)
scaffold0004 (492-540)||(92893-92941)
[»] scaffold0003 (2 HSPs)
scaffold0003 (493-541)||(236915-236963)
scaffold0003 (493-541)||(241675-241723)
[»] scaffold0793 (1 HSPs)
scaffold0793 (493-540)||(4822-4869)
[»] scaffold0528 (1 HSPs)
scaffold0528 (198-281)||(920-1003)
[»] scaffold0009 (1 HSPs)
scaffold0009 (499-538)||(188473-188512)
[»] scaffold0007 (1 HSPs)
scaffold0007 (494-541)||(225199-225246)
[»] scaffold0320 (1 HSPs)
scaffold0320 (461-490)||(17275-17304)
[»] scaffold0306 (1 HSPs)
scaffold0306 (494-535)||(13482-13523)
[»] scaffold0152 (1 HSPs)
scaffold0152 (494-535)||(21804-21845)
[»] scaffold0053 (1 HSPs)
scaffold0053 (493-541)||(8868-8916)
[»] scaffold0019 (1 HSPs)
scaffold0019 (493-541)||(71806-71854)


Alignment Details
Target: chr1 (Bit Score: 346; Significance: 0; HSPs: 102)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 346; E-Value: 0
Query Start/End: Original strand, 211 - 589
Target Start/End: Complemental strand, 10233656 - 10233276
Alignment:
Q  211 aaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataaggaataaacagccaatttagtcc 310  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10233656 aaaaatgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataaggaataaacagccaatttagtcc 10233557  T
Q  311 ccaaactatctctcactcaccaattcggtcattgatctattgaaatcaactaaaactccctaaactatactctaatccatcaatttgataactcagtaaa 410  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10233556 ccaaactatctctcactcaccaattcggtcattgatctatttaaatcaactaaaactccctaaactatactctcatccatcaatttgataactcagtaaa 10233457  T
Q  411 ctgatttagggaccaaattgatggatgaaatgagagtatggtttaggaacattttagttgattttaatagtttagggaccgatatgaagcacggacactc 510  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10233456 ctgatttagggaccaaattgatggatgaaatgagagtatggtttaggaacattttagtttattttaatagtttagggaccgatatgaagcacggacactc 10233357  T
Q  511 ctctgattaggtgtgtcctggtgtcggacacatgaccccgacaccaacacagacac--ataattacactaaattatgtgat 589  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||  ||||||||||| |||||||||||    
T  10233356 ctctgattaggtgtgtcctggtgtcggacacatgacaccgacaccaacacagacacatataattacactgaattatgtgat 10233276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 49938734 - 49938864
Alignment:
Q  137 tttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcata 235  Q
    ||||||||| || ||||||| ||||| ||||||||| ||||||||||||||||  |||| ||||||| |||| |||||| ||||||||||||||||||||    
T  49938734 tttttgtatatgttataagttgtttttataagctatattagagaacttatgaaaataagttgaaaaaagcttttgaaaattgtcataagctgttttcata 49938833  T
Q  236 agttcttccaaacagtcttacaaaacatatg 266  Q
    |||||| ||||||| ||| ||||||| ||||    
T  49938834 agttctcccaaacaatctcacaaaacttatg 49938864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 159 - 288
Target Start/End: Original strand, 2295106 - 2295235
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaa 258  Q
    ||||||||||||| | ||||||||| ||||  |||| |||| |  ||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  2295106 ttttataagctatatcagagaacttgtgaaaataagttgaatagagcttatgaaaattgtcataagctgttttcataagttctcccaaacagtctcacaa 2295205  T
Q  259 aacatatgtcagtggataagctctaataag 288  Q
    ||| |||| |||| ||||||||| ||||||    
T  2295206 aacttatgccagtagataagctcaaataag 2295235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 129 - 288
Target Start/End: Complemental strand, 3234106 - 3233946
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||||| |||||||||| ||||| ||||||||| || |||||||||||||  ||||  ||||||  |||||||||| ||| ||||| ||    
T  3234106 ttaaattgtttttgtatatgctataagttgtttttataagctatattggagaacttatgaaaataagtagaaaaaaacttatgaaaactgttataagttg 3234007  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    |||||||||||||| || |||||||| ||||||| || | || | ||||||||| ||||||    
T  3234006 ttttcataagttctccctaacagtctcacaaaacttacggcactagataagctcaaataag 3233946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 129 - 264
Target Start/End: Complemental strand, 24915142 - 24915006
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||||| |||||||||  ||||| ||||||| |||| |||||||| ||||  |||| ||||||| ||||||||||| ||||||||| ||    
T  24915142 ttaaattgtttttgtatatgctataagctgttttcataagctgtcttggagaacttgtgaaaataagttgaaaaaagcttatgaaaaatgtcataagttg 24915043  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacata 264  Q
    ||||||||| || | |||||||| || ||||||||||    
T  24915042 ttttcataaattgtcccaaacagcctcacaaaacata 24915006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 129 - 271
Target Start/End: Original strand, 27976574 - 27976725
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaactta---------tgaatttaagctgaaaaaggcttatgaaaagtgt 218  Q
    ||||||||||||||||| |||||||||| ||||| |||||||||||| |||||||||         ||||  |||||||||||| ||||||||||| |||    
T  27976574 ttaaattgtttttgtatatgctataagttgttttcataagctatcttcgagaacttaatgaaataatgaaaataagctgaaaaaagcttatgaaaaatgt 27976673  T
Q  219 cataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagt 271  Q
    |||||||| |||||| ||||| ||||||||||||| ||||||| |||||||||    
T  27976674 cataagctattttcaaaagtt-ttccaaacagtctaacaaaacttatgtcagt 27976725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 132 - 288
Target Start/End: Original strand, 1432497 - 1432654
Alignment:
Q  132 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttt 230  Q
    |||||||||| |||  ||||||| | ||||| |||| ||||||| |||||||||||||  |||||| |  | | |||||||| | ||||||| ||| |||    
T  1432497 aattgtttttttataagctataaattgttttcataaactatcttggagaacttatgaaagtaagctaagtatgtcttatgaacaatgtcatacgctattt 1432596  T
Q  231 tcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||||||||||||||||||||| ||||||  |||||| |||||||||||| ||||||    
T  1432597 tcataagttcttccaaacagtctcacaaaatttatgtcggtggataagctcaaataag 1432654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 129 - 288
Target Start/End: Complemental strand, 14576744 - 14576585
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||||| |||||||| |  |||| ||||||||| ||||||||||| ||||  |||||||||||| |||| |||||| ||||||||||||    
T  14576744 ttaaattgtttttgtatatgctataatttttttttataagctatattagagaactt-tgaaaataagctgaaaaaagcttttgaaaattgtcataagctg 14576646  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    |||||| ||||| | |||||||||   ||||||  || | |||| ||||||||| ||||||    
T  14576645 ttttcacaagttgtcccaaacagtgccacaaaatttaagccagtagataagctcaaataag 14576585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 15477578 - 15477657
Alignment:
Q  162 tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttct 241  Q
    |||||| ||| ||||||||||||||||| |||||||||||| |||| |||||| ||||||||||||||||||||||||||    
T  15477578 tataagttatattagagaacttatgaatataagctgaaaaaagcttttgaaaattgtcataagctgttttcataagttct 15477657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 129 - 241
Target Start/End: Complemental strand, 17603475 - 17603362
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||||| |||||||||| ||||| ||||||||| || |||||||| ||||  |||| || |||| | ||||||||| ||||||||||||    
T  17603475 ttaaattgtttttgtatatgctataagttgtttttataagctatattggagaacttctgaaaataagttgtaaaaagtttatgaaaattgtcataagctg 17603376  T
Q  228 ttttcataagttct 241  Q
    ||||| ||||||||    
T  17603375 ttttcgtaagttct 17603362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 159 - 288
Target Start/End: Original strand, 29904761 - 29904890
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaa 258  Q
    |||||||| |||| ||| ||||||||||||  |||| ||||||| |||| |||||| || ||||||||||||| |||||||||  |||||||||| ||||    
T  29904761 ttttataaactatattatagaacttatgaaaataaggtgaaaaaagcttttgaaaattgccataagctgtttttataagttctctcaaacagtctcacaa 29904860  T
Q  259 aacatatgtcagtggataagctctaataag 288  Q
    ||| ||||  ||| ||||||||| ||||||    
T  29904861 aacttatgcaagtagataagctcaaataag 29904890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 129 - 288
Target Start/End: Original strand, 6556950 - 6557111
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggc-ttatgaaaagtgtcataagct 226  Q
    ||||||||||||||||| || ||||||| ||||| ||||| ||| ||| |||||||||||   |||||| |||||  | || |||||| |||||||||||    
T  6556950 ttaaattgtttttgtatatgttataagttgtttttataagttatattaaagaacttatgacaataagctaaaaaaaaccttttgaaaactgtcataagct 6557049  T
Q  227 gttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
     ||||||||||||||  |||| ||||| ||||||| ||||| ||| |||||| || ||||||    
T  6557050 attttcataagttctctcaaatagtctcacaaaacttatgttagtagataagttcaaataag 6557111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 130 - 265
Target Start/End: Original strand, 51688685 - 51688823
Alignment:
Q  130 taaattgtttttgtatttgctataagtggtttta-taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataa---gc 225  Q
    |||||||||||||||  |||||||||| |||||  ||||||||| | |||| |||||||| |||||||||||||  ||| |||||||||||||||   ||    
T  51688685 taaattgtttttgtacatgctataagttgttttcgtaagctatcgtggaga-cttatgaaattaagctgaaaaaaacttctgaaaagtgtcataagctgc 51688783  T
Q  226 tgttttcataagttcttccaaacagtcttacaaaacatat 265  Q
    || ||||||||||||| |||| |||| | |||||||||||    
T  51688784 tgctttcataagttctcccaagcagtttaacaaaacatat 51688823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 129 - 288
Target Start/End: Original strand, 13809977 - 13810137
Alignment:
Q  129 ttaaattgtttttgtatttgctata-agtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||||| ||||||| | || |||||||| |||| ||||||||||| ||||  |||||| | |||  ||| |||||| |||||||| |||    
T  13809977 ttaaattgtttttgtatatgctatatattgtttttataaactatattagagaacttgtgaaaataagctaagaaaaacttttgaaaattgtcataaactg 13810076  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    | ||||||||||||   ||| ||||| ||||||| || |||||| ||||||| | ||||||    
T  13810077 tattcataagttctctaaaagagtctcacaaaacttacgtcagtagataagcacaaataag 13810137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 129 - 239
Target Start/End: Complemental strand, 30286611 - 30286499
Alignment:
Q  129 ttaaattgtttttgtat-ttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagct 226  Q
    ||||||||||||||||| ||||||||||| ||||| ||||||||| ||  |||||| |  || || || ||||||| ||||||||||| |||||||||||    
T  30286611 ttaaattgtttttgtatgttgctataagttgtttttataagctattttgaagaactaagaaaatttagttgaaaaaagcttatgaaaattgtcataagct 30286512  T
Q  227 gttttcataagtt 239  Q
    |||||||||||||    
T  30286511 gttttcataagtt 30286499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 192 - 288
Target Start/End: Original strand, 38001639 - 38001734
Alignment:
Q  192 aagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||||||||   |||||||| || ||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||| ||||| ||| ||||||    
T  38001639 aagctgaaaacaacttatgaacag-gtcataagctgttttcataagttctcccaaacagtctcacaaaacttatgtcagttgataaactcaaataag 38001734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 261
Target Start/End: Complemental strand, 3887692 - 3887590
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaa 258  Q
    ||||| |||||| ||  |||||||||||||  |||| | ||||  ||||||||| | ||||||||| ||||||||||||||||||||||||| |||||||    
T  3887692 ttttacaagctagctaggagaacttatgaaaataagttaaaaacagcttatgaacaatgtcataagatgttttcataagttcttccaaacagccttacaa 3887593  T
Q  259 aac 261  Q
    |||    
T  3887592 aac 3887590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 288
Target Start/End: Original strand, 5720935 - 5721064
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaagg-cttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttaca 257  Q
    ||||||||||||| ||||||||| ||||||  | ||||||||||   |||||||||  |||||||||||||||||||||||||| ||||||||||  |||    
T  5720935 ttttataagctatattagagaacatatgaaaatcagctgaaaaaatacttatgaaat-tgtcataagctgttttcataagttctcccaaacagtccaaca 5721033  T
Q  258 aaacatatgtcagtggataagctctaataag 288  Q
    |||| ||||  ||| | ||||||| ||||||    
T  5721034 aaacttatgcaagtagttaagctcaaataag 5721064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 130 - 239
Target Start/End: Complemental strand, 37631649 - 37631539
Alignment:
Q  130 taaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgt 228  Q
    |||||||||||||| | || ||| || || |||| |||||||| || |||||||||||||  |||||||||||| |||| |||||| ||||| |||||||    
T  37631649 taaattgtttttgtgtatgatattagctgtttttgtaagctatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgtcagaagctgt 37631550  T
Q  229 tttcataagtt 239  Q
    |||||||||||    
T  37631549 tttcataagtt 37631539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 164 - 249
Target Start/End: Original strand, 37473418 - 37473503
Alignment:
Q  164 taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaaca 249  Q
    |||| |||||| |||||||||||||  ||||||| |||| ||||||||||| ||||||||| |||||||| ||||||| |||||||    
T  37473418 taagttatcttggagaacttatgaaaataagctggaaaaagcttatgaaaaatgtcataagttgttttcaaaagttctcccaaaca 37473503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 288
Target Start/End: Original strand, 473143 - 473302
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    |||||||||||| || | |||||||||| ||||| ||||| | | || |||||||||||||  |||| ||||||| ||||||||||| ||| |||||||     
T  473143 ttaaattgttttcgtgtatgctataagttgtttttataagttctattggagaacttatgaaaataagttgaaaaaagcttatgaaaattgt-ataagctt 473241  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    |||||||||||||| |||||  || | ||| ||| |||| |||| |||| |||| ||||||    
T  473242 ttttcataagttctcccaaaatgtttcacagaacttatgccagtagataggctcaaataag 473302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 280
Target Start/End: Original strand, 14331970 - 14332112
Alignment:
Q  137 tttttgtatttgctataagtggttttataa-gctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcata 235  Q
    ||||||||| |||||||||| ||||   || |||||||| ||| |||| |||| ||||||||||||| ||| | |||| |||||||||  ||||||||||    
T  14331970 tttttgtatatgctataagttgtttccaaatgctatcttggaggactt-tgaaattaagctgaaaaaagctaacgaaa-gtgtcataatttgttttcata 14332067  T
Q  236 agttcttccaaacagtcttacaaaacatatgtcagtggataagct 280  Q
    |||||  || |||||||| |||||||||||| |||| ||||||||    
T  14332068 agttcacccgaacagtctcacaaaacatatgacagtagataagct 14332112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 128 - 266
Target Start/End: Complemental strand, 27970387 - 27970247
Alignment:
Q  128 attaaattgtttttgtatttgctataagtggtttt-ataagctatcttagag-aacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagc 225  Q
    |||||||||||||||||| |||||||||| ||||  |||| |||| || | | ||||||||||  ||| |||||||| ||||||||||| |||||||| |    
T  27970387 attaaattgtttttgtatatgctataagttgtttccataaactatttttggggaacttatgaaaataaactgaaaaaagcttatgaaaaatgtcataaac 27970288  T
Q  226 tgttttcataagttcttccaaacagtcttacaaaacatatg 266  Q
     ||||| ||||||||| ||||| ||| | ||||||| ||||    
T  27970287 cgtttttataagttctcccaaagagtatcacaaaacttatg 27970247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 50644258 - 50644186
Alignment:
Q  216 tgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    |||| |||| |||||||||||||||| ||||||||||| ||||||||||||| ||| ||||||||| ||||||    
T  50644258 tgtcgtaagttgttttcataagttctcccaaacagtctcacaaaacatatgttagtagataagctcaaataag 50644186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 131 - 262
Target Start/End: Complemental strand, 51929628 - 51929496
Alignment:
Q  131 aaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgtt 229  Q
    ||||||||||| ||| |||  |||| || |||||||| |||| || ||||||||||| |  |||| ||||||| ||||||||||| ||||||||||||||    
T  51929628 aaattgtttttatatatgccttaagctgtttttataaactatattggagaacttatggaaataagttgaaaaaagcttatgaaaattgtcataagctgtt 51929529  T
Q  230 ttcataagttcttccaaacagtcttacaaaaca 262  Q
    ||||| | |||| ||||||| ||| ||| ||||    
T  51929528 ttcatgaattctcccaaacaatctcacagaaca 51929496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 132 - 266
Target Start/End: Original strand, 2777874 - 2778008
Alignment:
Q  132 aattgtttttgtatttgctataagtggtttta-taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttt 230  Q
    |||||| |||||||  ||||||||  |||||| |||| || ||| |||||||||||||  ||||||||||| |||||||||| |  |||||||| || ||    
T  2777874 aattgtctttgtataagctataagctgttttaataagttaacttggagaacttatgaaaataagctgaaaacggcttatgaata-cgtcataagttggtt 2777972  T
Q  231 tcataagttcttccaaacagtcttacaaaacatatg 266  Q
    ||||||||||| | ||||||||| ||||||| ||||    
T  2777973 tcataagttctcctaaacagtctcacaaaacttatg 2778008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 163 - 258
Target Start/End: Complemental strand, 51695551 - 51695456
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaa 258  Q
    |||||||||||| ||||| |||||||  |||||||||||  ||||||||| | ||| ||||| |||||  ||||||||||||||||||||| ||||    
T  51695551 ataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaacaatgtgataagttgtttatataagttcttccaaacagtctcacaa 51695456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 159 - 288
Target Start/End: Original strand, 5741616 - 5741745
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaagg-cttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttaca 257  Q
    ||||||||||||| ||||||||||||||||  | ||||||||||   |||||||||  ||||||||| |||||||||||||||| |||||||||   |||    
T  5741616 ttttataagctatattagagaacttatgaaaatcagctgaaaaaatacttatgaaat-tgtcataagttgttttcataagttctcccaaacagttcaaca 5741714  T
Q  258 aaacatatgtcagtggataagctctaataag 288  Q
    |||| ||||  ||| | ||||||| ||||||    
T  5741715 aaacttatgcaagtagttaagctcaaataag 5741745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 163 - 261
Target Start/End: Original strand, 7941620 - 7941718
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaac 261  Q
    ||||||||| |  |||||||||||||  |||| ||||||  ||||  ||| | ||||||||||||||||||||| |||||||||||||||| |||||||    
T  7941620 ataagctatttcggagaacttatgaaaataagttgaaaatagcttcggaacaatgtcataagctgttttcataaattcttccaaacagtctcacaaaac 7941718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 288
Target Start/End: Complemental strand, 37842427 - 37842287
Alignment:
Q  148 gctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaa 246  Q
    ||||||||| ||||| ||||||||||||  ||||||||| ||  |||||||||||  ||||||||| | |||||| || |||||||||||||||| |  |    
T  37842427 gctataagttgttttcataagctatcttgaagaacttataaaaataagctgaaaactgcttatgaaca-tgtcattagatgttttcataagttctactga 37842329  T
Q  247 acagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||| | || |||| ||| ||||| ||||||||| ||||||    
T  37842328 acagtgtcaccaaacttatatcagtagataagctcaaataag 37842287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 494 - 542
Target Start/End: Original strand, 16297223 - 16297271
Alignment:
Q  494 atgaagcacggacactcctctgattaggtgtgtcctggtgtcggacaca 542  Q
    |||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  16297223 atgaagcacggacactcctcggattaggcgtgtcctggtgtcggacaca 16297271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 167 - 286
Target Start/End: Original strand, 7069434 - 7069553
Alignment:
Q  167 gctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatg 266  Q
    |||||||| |||||||  ||||  |||  |||||||  |||||||| | || ||||||||||||| ||||||||||||||| |||||||||||||  ||     
T  7069434 gctatcttggagaactagtgaaaataatttgaaaaaaacttatgaacaatggcataagctgttttgataagttcttccaaatagtcttacaaaactaatt 7069533  T
Q  267 tcagtggataagctctaata 286  Q
    | ||| ||||||||| ||||    
T  7069534 ttagtagataagctcaaata 7069553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 129 - 251
Target Start/End: Complemental strand, 41195284 - 41195162
Alignment:
Q  129 ttaaattgtttttgtatttgctat-aagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||| ||||||||||| | |||| || || ||| |||| ||||||| |||||||||||||  |||||||||||| |||||| |||| |||||||||||     
T  41195284 ttaaactgtttttgtatatactatcaactgttttcataaactatcttggagaacttatgaaaataagctgaaaaaagcttattaaaa-tgtcataagcta 41195186  T
Q  228 ttttcataagttcttccaaacagt 251  Q
    |||  | ||||||| |||||||||    
T  41195185 tttataaaagttctcccaaacagt 41195162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 493 - 535
Target Start/End: Original strand, 7918155 - 7918197
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtc 535  Q
    ||||||||||||||||||||| |||||||||||||||||||||    
T  7918155 tatgaagcacggacactcctcggattaggtgtgtcctggtgtc 7918197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 162 - 260
Target Start/End: Complemental strand, 27820253 - 27820156
Alignment:
Q  162 tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaa 260  Q
    |||||||||||||| |||| |||||||  |||||||||||  ||||||||| | ||| ||||||| ||||||||| |||| | ||||||||| ||||||    
T  27820253 tataagctatcttaaagaatttatgaaaataagctgaaaatagcttatgaacaatgtaataagct-ttttcataaattctccaaaacagtctcacaaaa 27820156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 196 - 266
Target Start/End: Complemental strand, 37517189 - 37517119
Alignment:
Q  196 tgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatg 266  Q
    ||||||| |||| |||||| ||||||||||||||||| ||||||||| || ||||||| ||||||| ||||    
T  37517189 tgaaaaaagcttttgaaaattgtcataagctgttttcgtaagttctttcatacagtctcacaaaacttatg 37517119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 163 - 248
Target Start/End: Complemental strand, 7137054 - 7136970
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaac 248  Q
    |||||||||||| |||||||||||||  |||||||||||   |||||||| | ||||||||||  ||||||||||||||| |||||    
T  7137054 ataagctatcttggagaacttatgaaaataagctgaaaataacttatgaata-tgtcataagcgattttcataagttctttcaaac 7136970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 177 - 266
Target Start/End: Complemental strand, 27145777 - 27145689
Alignment:
Q  177 agaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatg 266  Q
    ||||||||||||  ||||||||||||  |||||||| | |||||||||  |||||| |||||||||||||| ||||| ||||||| ||||    
T  27145777 agaacttatgaaaataagctgaaaaaa-cttatgaacaatgtcataagtcgttttcttaagttcttccaaaaagtctcacaaaacttatg 27145689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 231 - 288
Target Start/End: Complemental strand, 33204382 - 33204325
Alignment:
Q  231 tcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||||||||| ||||||||||| ||||||| ||||||||| ||||||||| ||||||    
T  33204382 tcataagttctcccaaacagtctcacaaaacttatgtcagtagataagctcaaataag 33204325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 137 - 247
Target Start/End: Complemental strand, 40977487 - 40977375
Alignment:
Q  137 tttttgtatttgctataag--tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcat 234  Q
    ||||||||| |||||||||  |  |||||||||| || | ||||||| ||||||  ||||||| |||| |||| |||||| ||||||||  |||||||||    
T  40977487 tttttgtatatgctataaggttaattttataagccatataagagaacatatgaaaataagctggaaaaagcttttgaaaattgtcataaattgttttcat 40977388  T
Q  235 aagttcttccaaa 247  Q
    ||||||| |||||    
T  40977387 aagttctcccaaa 40977375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 241
Target Start/End: Complemental strand, 41184741 - 41184628
Alignment:
Q  129 ttaaattgtttttgtatttgctataagt-ggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||||| |  ||||| | |||||||||  | || || || ||||||||||  |||| |||||||  |||||||||| |||||||||||     
T  41184741 ttaaattgtttttgtatatattataatttggttttatataccatattggaaaacttatgaaaataagttgaaaaaaacttatgaaaattgtcataagcta 41184642  T
Q  228 ttttcataagttct 241  Q
    ||||||||||||||    
T  41184641 ttttcataagttct 41184628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 2218346 - 2218298
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| ||||||| ||||||| |||||||||||    
T  2218346 tatgaagcacggacactcctcagattaggcgtgtcctagtgtcggacac 2218298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 440 - 484
Target Start/End: Complemental strand, 32047067 - 32047023
Alignment:
Q  440 atgagagtatggtttaggaacattttagttgattttaatagttta 484  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||    
T  32047067 atgagagtatggtttaggaacatttaagttgatttaaatagttta 32047023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 134 - 267
Target Start/End: Original strand, 36872716 - 36872846
Alignment:
Q  134 ttgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttc 232  Q
    |||||||||||| ||||||||| || ||||| ||||||| ||  ||||||||||||  |||| ||||||| |||||| |||| ||||||||   ||||||    
T  36872716 ttgtttttgtatgtgctataagttgtttttacaagctatattgcagaacttatgaaaataagttgaaaaa-gcttatcaaaattgtcataa---gttttc 36872811  T
Q  233 ataagttcttccaaacagtcttacaaaacatatgt 267  Q
    |||| |||| | |||||||||  |||||| |||||    
T  36872812 ataaattctccaaaacagtctcgcaaaacttatgt 36872846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 227
Target Start/End: Original strand, 42174841 - 42174933
Alignment:
Q  136 gtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    |||||||||| |||||||||| ||||| ||||| ||| || |||||||||||||  |||| | ||||  ||||||||||| ||||||||||||    
T  42174841 gtttttgtatatgctataagttgtttttataagttatattggagaacttatgaaaataagttaaaaacagcttatgaaaattgtcataagctg 42174933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 494 - 542
Target Start/End: Original strand, 42359391 - 42359439
Alignment:
Q  494 atgaagcacggacactcctctgattaggtgtgtcctggtgtcggacaca 542  Q
    |||||||||||||||||||| ||||||| |||||| |||||||||||||    
T  42359391 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggacaca 42359439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 220 - 271
Target Start/End: Complemental strand, 9572100 - 9572049
Alignment:
Q  220 ataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagt 271  Q
    |||||||||||||||||||||| ||||||||||| ||||| | |||||||||    
T  9572100 ataagctgttttcataagttctcccaaacagtctcacaaatcttatgtcagt 9572049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 191 - 266
Target Start/End: Original strand, 11941304 - 11941379
Alignment:
Q  191 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatg 266  Q
    |||||||||||  ||||||||| | ||| ||||||| |||||||||| ||| ||||||||||| ||| ||||||||    
T  11941304 taagctgaaaacagcttatgaacaatgttataagctattttcataagctctcccaaacagtctcacataacatatg 11941379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 162 - 288
Target Start/End: Original strand, 33186318 - 33186445
Alignment:
Q  162 tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagt-gtcataagctgttttcataagttcttccaaacagtcttacaaaa 260  Q
    ||||| |||| |||||||||||||  |  |||||||||||| |||| |||||| | ||||||| | ||||||||||||||| | | ||||||| ||||||    
T  33186318 tataatctatattagagaacttatataaataagctgaaaaaagcttttgaaaaattgtcataaccagttttcataagttctcctagacagtctcacaaaa 33186417  T
Q  261 catatgtcagtggataagctctaataag 288  Q
    | |||| ||  |||||| ||| ||||||    
T  33186418 cttatgccaacggataaactcaaataag 33186445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 166 - 241
Target Start/End: Complemental strand, 38503518 - 38503443
Alignment:
Q  166 agctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttct 241  Q
    ||||||||| |||||||||||||  |||||||||||   |||||||| | ||||||| ||||||| ||||||||||    
T  38503518 agctatcttggagaacttatgaaaataagctgaaaacaacttatgaacaatgtcataggctgtttccataagttct 38503443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 40258874 - 40258921
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggaca 540  Q
    ||||||||| ||||||||||| ||||||| ||||||||||||||||||    
T  40258874 tatgaagcatggacactcctcggattaggcgtgtcctggtgtcggaca 40258921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 495 - 541
Target Start/End: Original strand, 11634066 - 11634112
Alignment:
Q  495 tgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    |||||||||||||||| || |||| ||||||||||||||||||||||    
T  11634066 tgaagcacggacactcttcggatttggtgtgtcctggtgtcggacac 11634112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 159 - 281
Target Start/End: Complemental strand, 27146315 - 27146193
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaa 258  Q
    |||| ||| |||||||  |||||||| |||  |||| ||||||  ||||||||| | ||||||||| ||||| | |||||||||||||  ||||| ||||    
T  27146315 ttttgtaaactatcttgaagaacttacgaaagtaagttgaaaacagcttatgaacaatgtcataagttgtttccttaagttcttccaacaagtctcacaa 27146216  T
Q  259 aacatatgtcagtggataagctc 281  Q
    ||| |||| || | |||||||||    
T  27146215 aacttatgccaatagataagctc 27146193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 216 - 277
Target Start/End: Original strand, 489257 - 489318
Alignment:
Q  216 tgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataa 277  Q
    ||||||||| |||||||||||||| ||| ||||||||||||||||  ||||| ||| |||||    
T  489257 tgtcataagttgttttcataagtttttctaaacagtcttacaaaaattatgttagtagataa 489318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 5709637 - 5709729
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtc 252  Q
    ||||| ||||||| || |||||||| ||||  |||| |||||||| |||||||||| || || ||||| ||||||||| |||| ||||||||||    
T  5709637 ttttagaagctatattggagaacttgtgaaaataagttgaaaaag-cttatgaaaattgccaaaagctattttcataaattctcccaaacagtc 5709729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 163 - 248
Target Start/End: Original strand, 10744315 - 10744399
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaac 248  Q
    ||||||| ||||||||||||||| ||  |||| ||||||  ||||||||| | || ||||||||||||||| ||||||| ||||||    
T  10744315 ataagctgtcttagagaacttataaaaataagatgaaaacagcttatgaaca-tgccataagctgttttcacaagttctcccaaac 10744399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 133 - 260
Target Start/End: Complemental strand, 12287279 - 12287151
Alignment:
Q  133 attgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataag-ctgttt 230  Q
    ||||||||||||| |||||||||| |||||  ||||||||||||  |||||||  ||  |||||||||||   |||||||||| || |||||| || |||    
T  12287279 attgtttttgtatatgctataagttgttttcttaagctatcttatggaacttacaaaaataagctgaaaacaacttatgaaaa-tgccataagactattt 12287181  T
Q  231 tcataagttcttccaaacagtcttacaaaa 260  Q
    ||| ||||||| |||| |||||| ||||||    
T  12287180 tcacaagttctcccaagcagtctcacaaaa 12287151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 130 - 226
Target Start/End: Complemental strand, 27820427 - 27820330
Alignment:
Q  130 taaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagct 226  Q
    |||||||||| |||||  |||||| | || |||||||||||||||| ||||| |||||||  |||||||||||  ||||||||| | |||| ||||||    
T  27820427 taaattgtttatgtataagctatatgctgtttttataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaacaatgtcgtaagct 27820330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 129 - 214
Target Start/End: Original strand, 47432075 - 47432160
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaa 214  Q
    |||||||||||||| || |||||||||  |||||||||| ||| ||  |||| |||||||  |||||||||||| |||| ||||||    
T  47432075 ttaaattgtttttgaatatgctataaggtgttttataagttatattgaagaatttatgaaaataagctgaaaaaagcttgtgaaaa 47432160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 497 - 541
Target Start/End: Complemental strand, 1209867 - 1209823
Alignment:
Q  497 aagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||| ||||| ||| |||||||||||||||||||||||||||    
T  1209867 aagcacgaacacttctcggattaggtgtgtcctggtgtcggacac 1209823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 6427593 - 6427545
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    |||||||||||||||||| || ||||||| |||||| ||||||||||||    
T  6427593 tatgaagcacggacactcatcagattaggcgtgtcccggtgtcggacac 6427545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 9828173 - 9828125
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| ||||||  |||||| ||||||||||||    
T  9828173 tatgaagcacggacactcctcggattagacgtgtcccggtgtcggacac 9828125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 10199464 - 10199381
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaa 247  Q
    ||||||||| ||||||| ||||||||  |||||||||||   |||||||| | ||||||||||| ||||||| |||||| |||||    
T  10199464 ataagctattttagagagcttatgaaaataagctgaaaacaacttatgaaca-tgtcataagctattttcatgagttctcccaaa 10199381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 287
Target Start/End: Original strand, 38247397 - 38247465
Alignment:
Q  219 cataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataa 287  Q
    ||||||||||||||||||||||| |||||||||   ||||||| |||| |||| |||||| || |||||    
T  38247397 cataagctgttttcataagttctcccaaacagtgacacaaaacttatgccagtagataagttcaaataa 38247465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 40917878 - 40917830
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||| ||||| ||||||| |||||| ||||||||||||    
T  40917878 tatgaagcacggacagtcctcggattaggcgtgtcccggtgtcggacac 40917830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 541
Target Start/End: Original strand, 1486646 - 1486693
Alignment:
Q  494 atgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||| |||||||||| ||||||| |||||| ||||||||||||    
T  1486646 atgaagcacagacactcctcggattaggcgtgtcccggtgtcggacac 1486693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 259
Target Start/End: Original strand, 10666772 - 10666834
Alignment:
Q  196 tgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaa 259  Q
    ||||||| ||||||||| | ||||||| ||| ||||||| |||||||||||||||||| |||||    
T  10666772 tgaaaaaagcttatgaacaatgtcataggct-ttttcatcagttcttccaaacagtctcacaaa 10666834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 216 - 259
Target Start/End: Original strand, 12763389 - 12763432
Alignment:
Q  216 tgtcataagctgttttcataagttcttccaaacagtcttacaaa 259  Q
    ||||||||||||||||| |||||||| | |||||||||||||||    
T  12763389 tgtcataagctgttttcgtaagttctccaaaacagtcttacaaa 12763432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 258
Target Start/End: Complemental strand, 31517788 - 31517702
Alignment:
Q  171 tcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaa 258  Q
    |||| |||| ||||||||  |||||||||||  ||||||||| | |||||| || |||||| ||||||||| ||||||||||| ||||    
T  31517788 tcttggagagcttatgaaaataagctgaaaacagcttatgaaca-tgtcatgagttgttttgataagttctcccaaacagtctcacaa 31517702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 183 - 242
Target Start/End: Original strand, 36872299 - 36872358
Alignment:
Q  183 tatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttctt 242  Q
    |||||| ||||| ||||||| ||||||||||| | | ||||||||||||||||| |||||    
T  36872299 tatgaaattaagttgaaaaaagcttatgaaaattataataagctgttttcataaattctt 36872358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 185
Target Start/End: Original strand, 39596578 - 39596633
Alignment:
Q  131 aaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttat 185  Q
    |||||||||||||||  |||||||| ||||||||||||||||||| |||| |||||    
T  39596578 aaattgtttttgtataagctataagatggttttataagctatcttggagagcttat 39596633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 249
Target Start/End: Original strand, 41505745 - 41505784
Alignment:
Q  210 gaaaagtgtcataagctgttttcataagttcttccaaaca 249  Q
    ||||| |||||||||||||||||||||||||| |||||||    
T  41505745 gaaaattgtcataagctgttttcataagttctcccaaaca 41505784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 253
Target Start/End: Complemental strand, 5592022 - 5591933
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtct 253  Q
    ||||| ||||||||| |||||||| |  |||  |||||| |||||||| |  ||||||||||||||||||||||| |||  ||||||||||    
T  5592022 ataagatatcttagataacttatggaaataaattgaaaacggcttatgcac-gtgtcataagctgttttcataagctctctcaaacagtct 5591933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 184 - 266
Target Start/End: Complemental strand, 7119972 - 7119891
Alignment:
Q  184 atgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatg 266  Q
    |||||| ||||||||||   ||||||||| | | ||||||| ||||||||||| ||||| |||||||||| ||||||| ||||    
T  7119972 atgaatataagctgaaagcagcttatgaaga-tatcataagttgttttcataaattcttgcaaacagtctcacaaaacttatg 7119891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 493 - 535
Target Start/End: Complemental strand, 22947848 - 22947806
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtc 535  Q
    ||||||||||||||||||||| ||||||| |||||| ||||||    
T  22947848 tatgaagcacggacactcctcggattaggcgtgtccaggtgtc 22947806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 34290224 - 34290333
Alignment:
Q  138 ttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataa 236  Q
    ||||||||  ||||||||  ||||| ||||||||||||  ||||||||||||  |||||||||||   |||||||| | ||||||||||| |||| ||||    
T  34290224 ttttgtataagctataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaata-tgtcataagcttttttaataa 34290322  T
Q  237 gttcttccaaa 247  Q
     |||| |||||    
T  34290323 attctcccaaa 34290333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 45975704 - 45975782
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttct 241  Q
    |||||||||||| ||||| |||||||  |||||||||||  ||||||||| | ||| |||  ||||||||||| |||||    
T  45975704 ataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaataatgttatacactgttttcatatgttct 45975782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 201
Target Start/End: Original strand, 49888749 - 49888819
Alignment:
Q  132 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaa 201  Q
    ||||||||| ||||  ||||| ||| ||||| ||||||||||||||||||||||||||  ||||| |||||    
T  49888749 aattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataagccgaaaa 49888819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 241
Target Start/End: Original strand, 10280664 - 10280740
Alignment:
Q  164 taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttct 241  Q
    |||||||||||  ||||||||||||  |||||||| ||| ||||||||| | ||  ||||| ||||||||||||||||    
T  10280664 taagctatcttcaagaacttatgaaaataagctgacaaaagcttatgaaca-tgaaataagttgttttcataagttct 10280740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 243 - 288
Target Start/End: Original strand, 15784411 - 15784456
Alignment:
Q  243 ccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||||||||||||||||| ||||| ||| ||||||||| ||||||    
T  15784411 ccaaacagtcttacaaaacttatgttagtagataagctcaaataag 15784456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 538
Target Start/End: Complemental strand, 16812674 - 16812629
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcgga 538  Q
    ||||||||||||||||||||| ||||||| |||||| ||| |||||    
T  16812674 tatgaagcacggacactcctcagattaggcgtgtcccggtttcgga 16812629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 538
Target Start/End: Original strand, 21365993 - 21366038
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcgga 538  Q
    ||||||||||||||||||||| ||||||| |||||  |||||||||    
T  21365993 tatgaagcacggacactcctcggattaggcgtgtctcggtgtcgga 21366038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 538
Target Start/End: Original strand, 22515828 - 22515873
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcgga 538  Q
    ||||||||||||||||||||| ||||||| |||||  |||||||||    
T  22515828 tatgaagcacggacactcctcggattaggcgtgtctcggtgtcgga 22515873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 242
Target Start/End: Original strand, 36872458 - 36872519
Alignment:
Q  181 cttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttctt 242  Q
    ||||||||| |||| | ||||| ||||||||||| | ||||||||||| ||||||| |||||    
T  36872458 cttatgaatataagttaaaaaaagcttatgaaaattttcataagctgtattcataaattctt 36872519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 261
Target Start/End: Complemental strand, 37617480 - 37617423
Alignment:
Q  204 gcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaac 261  Q
    ||||||||||  ||||| ||||||||||||||| ||||  |||||||||| |||||||    
T  37617480 gcttatgaaatttgtcaaaagctgttttcataaattctcgcaaacagtctcacaaaac 37617423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 435
Target Start/End: Original strand, 40663760 - 40663809
Alignment:
Q  386 tccatcaatttgataactcagtaaactgatttagggaccaaattgatgga 435  Q
    |||||||||||| |  |||||| ||||| |||||||||||||||||||||    
T  40663760 tccatcaatttggtcgctcagttaactggtttagggaccaaattgatgga 40663809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 196 - 289
Target Start/End: Complemental strand, 42575492 - 42575399
Alignment:
Q  196 tgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataagg 289  Q
    ||||||| ||||||||||| ||||||||| |||||| |||| || |  ||||||| || ||||||  ||||  ||| ||||||||| |||||||    
T  42575492 tgaaaaaagcttatgaaaactgtcataagttgtttttataaattttctcaaacagcctcacaaaatttatgctagtagataagctcaaataagg 42575399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 286
Target Start/End: Complemental strand, 43230843 - 43230705
Alignment:
Q  147 tgctataagtggtt-ttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttcca 245  Q
    |||||||||| ||| ||||| ||||| || ||||||| |||||  |||| ||||||| |||||| |||| |||||  |||||||||||||| |||| | |    
T  43230843 tgctataagttgttcttataggctatattggagaactaatgaaaataagttgaaaaaagcttataaaaactgtca--agctgttttcataaattctccta 43230746  T
Q  246 aacagtcttacaaaacatatgtcagtggataagctctaata 286  Q
    |||| |||   ||||| |||| |||| || |||||| ||||    
T  43230745 aacaatctcgtaaaacttatgccagtagagaagctcaaata 43230705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 133 - 248
Target Start/End: Original strand, 1509734 - 1509850
Alignment:
Q  133 attgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgtttt 231  Q
    ||||||||||||| ||  |||||| ||||| ||||||| | || |||||||| || |  |||| ||||||| |||||||| || |  ||||||||||||     
T  1509734 attgtttttgtatatgtaataagttgtttttataagctctgttggagaacttgtgtaaataagttgaaaaaagcttatgagaatttccataagctgtttc 1509833  T
Q  232 cataagttcttccaaac 248  Q
    || ||||||| ||||||    
T  1509834 caaaagttctaccaaac 1509850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 498 - 534
Target Start/End: Original strand, 13011172 - 13011208
Alignment:
Q  498 agcacggacactcctctgattaggtgtgtcctggtgt 534  Q
    |||||||||||||||| |||||||||||| |||||||    
T  13011172 agcacggacactcctcggattaggtgtgttctggtgt 13011208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 17408820 - 17408772
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    |||||||||| ||||||| || |||||||||| || |||||||||||||    
T  17408820 tatgaagcacagacactcttcagattaggtgtatcttggtgtcggacac 17408772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 505 - 541
Target Start/End: Original strand, 18190061 - 18190097
Alignment:
Q  505 acactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||| |||||||||||||| ||||||||||||    
T  18190061 acactcctcggattaggtgtgtcccggtgtcggacac 18190097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 19562557 - 19562604
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||| ||||||||| ||||||||||||||  |||||||||||    
T  19562557 tatgaagcacg-acactcctcggattaggtgtgtccctgtgtcggacac 19562604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 20157285 - 20157333
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||| |||||||  ||||||||||||  ||||||||||||    
T  20157285 tatgaagcacggatactcctcaaattaggtgtgtctcggtgtcggacac 20157333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 541
Target Start/End: Complemental strand, 26830701 - 26830657
Alignment:
Q  497 aagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||||||| |||||| ||| ||| ||||    
T  26830701 aagcacggacactcctctgattaggcgtgtcccggtatcgaacac 26830657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 29144321 - 29144369
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    |||||||||||||||||| || ||||||| |||| | ||||||||||||    
T  29144321 tatgaagcacggacactcttcggattaggcgtgttccggtgtcggacac 29144369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 36514679 - 36514607
Alignment:
Q  216 tgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||||||| | |||||||||||||| || |||||||| | ||||| |||| |||| ||||| ||| ||||||    
T  36514679 tgtcataagttattttcataagttctccctaacagtctcaaaaaacttatggcagtagataaactcaaataag 36514607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 37598949 - 37598901
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| ||||||| ||||||   ||||||||||    
T  37598949 tatgaagcacggacactcctcggattaggcgtgtcccattgtcggacac 37598901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 228 - 288
Target Start/End: Complemental strand, 39976201 - 39976141
Alignment:
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||||||||||||  |||||||| | ||||||| ||||||||| ||||| ||| ||||||    
T  39976201 ttttcataagttctctcaaacagtttcacaaaacttatgtcagtagataatctcaaataag 39976141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 259
Target Start/End: Original strand, 43338130 - 43338225
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaa 259  Q
    |||||||| | | |||| ||||||||  || ||||||||  | ||||||| | ||||||||||||||| |||||||||||| ||| | |||||||||    
T  43338130 ataagctaacatggagagcttatgaaaataggctgaaaatagattatgaaca-tgtcataagctgtttccataagttcttctaaataatcttacaaa 43338225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 46940749 - 46940797
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||| ||||||||| ||||||| |||| | ||||||||||||    
T  46940749 tatgaagcacgaacactcctcggattaggcgtgttccggtgtcggacac 46940797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 51190905 - 51190977
Alignment:
Q  216 tgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||||||||  |||| |||||||||   |||||||||  ||||||||||||||||  |||||||| ||||||    
T  51190905 tgtcataagccatttttataagttctcttaaacagtctcgcaaaacatatgtcagtatataagctcaaataag 51190977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 130; Significance: 4e-67; HSPs: 83)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 82 - 281
Target Start/End: Complemental strand, 33602166 - 33601965
Alignment:
Q  82 gatctggaaaatcaacgtaacag--caatttcgttatagnnnnnnngtattaaattgtttttgtatttgctataagtggttttataagctatcttagaga 179  Q
    |||||||||||||||||||||||  ||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33602166 gatctggaaaatcaacgtaacagagcaatttcgttatagtttttttgtattaaattgtttttgtatttgctataagtggttttataagctatcttagaga 33602067  T
Q  180 acttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagc 279  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |   ||| ||||| | ||||| |||| |||| |||||||    
T  33602066 acttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttttcgaaaagagtctcataaaacttatgccagtagataagc 33601967  T
Q  280 tc 281  Q
    ||    
T  33601966 tc 33601965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 129 - 287
Target Start/End: Complemental strand, 33601500 - 33601342
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgt 228  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  33601500 ttaaattatttttgtatttgctataagttgttttataagctatcttagagaacttatgaatttaagctgaaaaaagcttatgaaaagtgtcataagctgt 33601401  T
Q  229 tttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataa 287  Q
    |||||||||||||   ||| ||||| ||||||| |||| || | ||||||||| |||||    
T  33601400 tttcataagttctcgaaaagagtctcacaaaacttatgccaatagataagctcaaataa 33601342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 129 - 288
Target Start/End: Complemental strand, 19302650 - 19302494
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||||| || ||||||| ||||| |||||||||     ||||||||||||  |||| ||||||| | ||||||||| ||||||||||||    
T  19302650 ttaaattgtttttgtatatgttataagttgtttttataagctata----agaacttatgaaaataagttgaaaaaagtttatgaaaattgtcataagctg 19302555  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||||||| |||| ||||| | ||| ||||||| ||||||||| ||||||||| ||||||    
T  19302554 ttttcataaattctcccaaatattctcacaaaacttatgtcagtagataagctcaaataag 19302494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 130 - 288
Target Start/End: Complemental strand, 27863815 - 27863656
Alignment:
Q  130 taaattgtttttgtatttgctataagtggtttta-taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgt 228  Q
    |||||| | ||||||| |||||||||| |||||| ||| |||| ||||||||||||||||  |||||||||||| | || |||||| | ||  |||||||    
T  27863815 taaattttatttgtatatgctataagttgttttaataaactatattagagaacttatgaacataagctgaaaaaagtttttgaaaattttctcaagctgt 27863716  T
Q  229 tttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    |||||||||||||  |||| ||||| ||||||| |||| |||||||||||||| ||||||    
T  27863715 tttcataagttctctcaaatagtctcacaaaacttatgccagtggataagctcaaataag 27863656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 129 - 280
Target Start/End: Complemental strand, 17944434 - 17944282
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||||| || | ||||| ||||| ||||| |||||| || || ||||||| ||||||||||||| || |||||||||||||||||||||    
T  17944434 ttaaattgtttttgtatatgttgtaagttgttttcataagttatcttggataatttatgaaattaagctgaaaaaagcatatgaaaagtgtcataagctg 17944335  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagct 280  Q
    |||| ||||||| |   ||||||||| ||||| | |||| |||| ||||||||    
T  17944334 tttttataagttgtctgaaacagtctcacaaagcttatgccagtagataagct 17944282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 129 - 288
Target Start/End: Original strand, 48470023 - 48470183
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||||| |  ||||||| ||||| ||||||||| ||  | ||||||||||  |||||| ||||| ||||||||||| || |||||||||    
T  48470023 ttaaattgtttttgtatataatataagttgttttcataagctattttgaataacttatgaacataagctcaaaaaagcttatgaaaaatgccataagctg 48470122  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    |||||||||||||| ||||||| ||| | ||||| ||||||  | ||||||||| ||||||    
T  48470123 ttttcataagttctcccaaacaatctcataaaacttatgtctatagataagctcaaataag 48470183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 132 - 281
Target Start/End: Original strand, 34744010 - 34744160
Alignment:
Q  132 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttt 230  Q
    |||||||||||||| || ||||||| ||||| ||||||||| || |||||||||| ||  ||||  |||||| |||| |||||| ||||||||| | |||    
T  34744010 aattgtttttgtatatggtataagttgttttcataagctatattggagaacttataaaaataaggcgaaaaaagcttgtgaaaattgtcataagttcttt 34744109  T
Q  231 tcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctc 281  Q
    |||| |||||||||||||||||| ||||| | ||||| ||| |||||||||    
T  34744110 tcattagttcttccaaacagtctcacaaatcttatgttagtagataagctc 34744160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 132 - 259
Target Start/End: Original strand, 420342 - 420470
Alignment:
Q  132 aattgtttttgtatttgctataagtggtttta-taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttt 230  Q
    |||||||||||||| |||||||||| ||||   |||||||| || |||||||||||||  |||| ||||||||||||  ||||| ||||||||  |||||    
T  420342 aattgtttttgtatatgctataagttgtttccgtaagctatattggagaacttatgaaaataagttgaaaaaggctttagaaaactgtcataaattgttt 420441  T
Q  231 tcataagttcttccaaacagtcttacaaa 259  Q
    ||||||||||| ||||||||||| |||||    
T  420442 tcataagttctcccaaacagtctcacaaa 420470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 159 - 266
Target Start/End: Complemental strand, 21568555 - 21568448
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaa 258  Q
    ||||||||||||| || ||||||||||| |  |||| ||||||  ||||||||||| ||| |||||||||||||||||||||| ||||||||||| ||||    
T  21568555 ttttataagctatattggagaacttatggaactaagttgaaaagagcttatgaaaattgttataagctgttttcataagttctcccaaacagtctcacaa 21568456  T
Q  259 aacatatg 266  Q
    || |||||    
T  21568455 aatatatg 21568448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 163 - 288
Target Start/End: Original strand, 34035931 - 34036056
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaaca 262  Q
    |||||||||||||||||||||  |||  |||| ||||||   |||||||| | ||||||||| | |||||||||||||||||||  ||||| |||| |||    
T  34035931 ataagctatcttagagaacttgcgaaaataagttgaaaacaacttatgaacaatgtcataagttattttcataagttcttccaagtagtctcacaataca 34036030  T
Q  263 tatgtcagtggataagctctaataag 288  Q
    ||||||||| ||||||||| ||||||    
T  34036031 tatgtcagtagataagctcaaataag 34036056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 129 - 280
Target Start/End: Complemental strand, 19022676 - 19022524
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||  ||  |||||||||| ||||| ||||||||| || |||||||||||||  |||| |||| |   |||||||||| ||||||||| ||    
T  19022676 ttaaattgttttaataaatgctataagttgtttttataagctatattggagaacttatgaaaataagttgaagacaacttatgaaaattgtcataagttg 19022577  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagct 280  Q
    ||||||||| |||| ||||||| ||| |||||||  |||||||| ||||||||    
T  19022576 ttttcataaattctcccaaacaatctcacaaaactcatgtcagtagataagct 19022524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 129 - 243
Target Start/End: Complemental strand, 30571022 - 30570907
Alignment:
Q  129 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||| ||||||||| ||||||||| |  |||||||| |||  || ||||||||||||| ||||  ||||||| ||||||||||| ||||||||||||    
T  30571022 ttaaattatttttgtatatgctataagctatttttataacctacattggagaacttatgaaattaacatgaaaaaagcttatgaaaattgtcataagctg 30570923  T
Q  228 ttttcataagttcttc 243  Q
    |||||| |||||||||    
T  30570922 ttttcacaagttcttc 30570907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 288
Target Start/End: Complemental strand, 11619218 - 11619089
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaa 258  Q
    ||||||||||||  || ||||||||||||| ||||| ||||||| ||||||||||| ||||||||| ||||||||||| |||| |||| | || | |  |    
T  11619218 ttttataagctacgttggagaacttatgaaattaagttgaaaaaagcttatgaaaattgtcataagttgttttcataaattctcccaatctgtttcatga 11619119  T
Q  259 aacatatgtcagtggataagctctaataag 288  Q
    | | ||||||||| ||||||||| ||||||    
T  11619118 agcttatgtcagtagataagctcaaataag 11619089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 129 - 241
Target Start/End: Original strand, 39967899 - 39968012
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    |||||||||||| ||| | ||||||||| ||||| ||||||||||| |||||||| |||||  |||| ||||||  ||||||||| | || |||||||||    
T  39967899 ttaaattgttttcgtactagctataagttgttttcataagctatctgagagaactaatgaaaataagttgaaaacagcttatgaacaatgccataagctg 39967998  T
Q  228 ttttcataagttct 241  Q
    ||||||||||||||    
T  39967999 ttttcataagttct 39968012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 128 - 271
Target Start/End: Original strand, 45593505 - 45593650
Alignment:
Q  128 attaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctg-aaaaaggcttatgaaaagtgtcataagc 225  Q
    |||||||  ||||||||| ||||||||| |  |||| ||||||||||| ||||||||| |||  ||| ||| ||||| ||||||||||| |||||| ||     
T  45593505 attaaatattttttgtatatgctataagctatttttctaagctatcttggagaacttacgaaaataaactggaaaaaagcttatgaaaaatgtcatcaga 45593604  T
Q  226 tgttttcataagttcttccaaacagtcttacaaaacatatgtcagt 271  Q
    |||||| ||||||||| ||||||||||| ||||| | |||||||||    
T  45593605 tgtttttataagttctcccaaacagtctcacaaagcttatgtcagt 45593650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 163 - 253
Target Start/End: Complemental strand, 38499969 - 38499879
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtct 253  Q
    |||||| ||||| |||||||||||||  ||||||| |||| ||||||||||| |||||||||||||||| | ||||||| ||||| |||||    
T  38499969 ataagcaatcttggagaacttatgaaaataagctggaaaaagcttatgaaaaatgtcataagctgttttgaaaagttctcccaaagagtct 38499879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 163 - 287
Target Start/End: Original strand, 36517593 - 36517715
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaaca 262  Q
    |||||||||||| ||||| |||||||  ||| |||||||  ||||||||| | |||||  ||||||||| ||||||||| ||||||||||||| |||||     
T  36517593 ataagctatcttggagaaattatgaaaataaactgaaaatagcttatgaacaatgtca--agctgttttaataagttctcccaaacagtcttagaaaact 36517690  T
Q  263 tatgtcagtggataagctctaataa 287  Q
    |||| |||| | ||||||| |||||    
T  36517691 tatgccagtagctaagctcaaataa 36517715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 129 - 288
Target Start/End: Complemental strand, 46280363 - 46280211
Alignment:
Q  129 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||||| ||||||||| || ||||||||||||| || |||||||||||||  || ||||||||| |||           | ||||||||    
T  46280363 ttaaattgtttttgtatatgctataagctgtttttataagctatattggagaacttatgaaaataggctgaaaaaagct-----------tgataagctg 46280275  T
Q  228 ttttc---ataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    |||||   ||||||||| ||||||||||| ||||||||||||||||  ||||| ||| ||||||    
T  46280274 ttttcataataagttctcccaaacagtctcacaaaacatatgtcagcagataaactcaaataag 46280211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 135 - 280
Target Start/End: Original strand, 49019853 - 49020000
Alignment:
Q  135 tgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttc- 232  Q
    ||||||||||| ||||||||| |  ||||||||| ||| ||  ||||||||||||  ||| | |||||| | || |||||| | ||||||||| |||||     
T  49019853 tgtttttgtatatgctataagctatttttataagttatattgtagaacttatgaaaataaaccgaaaaaagattgtgaaaattttcataagcttttttcc 49019952  T
Q  233 ataagttcttccaaacagtcttacaaaacatatgtcagtggataagct 280  Q
    | ||||||| ||||||||||| ||||||||||||||||  ||||||||    
T  49019953 acaagttctcccaaacagtctcacaaaacatatgtcagcagataagct 49020000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 191 - 281
Target Start/End: Original strand, 35056717 - 35056807
Alignment:
Q  191 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctc 281  Q
    |||| ||||||| ||||||  |||||||||||| ||||||| ||||||||| ||||||||| |||| |||| ||||| ||| |||||||||    
T  35056717 taagttgaaaaaagcttattgaaagtgtcataatctgtttttataagttctcccaaacagttttactaaacgtatgttagtagataagctc 35056807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 191 - 288
Target Start/End: Original strand, 5947283 - 5947380
Alignment:
Q  191 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||||| |||| || |||||||| |||||||||||| ||||| ||||||||||||||||||| | ||||| |||  || | ||||||||| ||||||    
T  5947283 taagctgtaaaaagcatatgaaaaatgtcataagctggtttcaaaagttcttccaaacagtctcataaaacttataccaatagataagctcaaataag 5947380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 150 - 266
Target Start/End: Complemental strand, 19214476 - 19214359
Alignment:
Q  150 tataagtggttt-tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaac 248  Q
    ||||||| |||| |||||||||| ||  ||||||||||||  |||| ||||| | | ||||||||| ||||||  |||||||||||||||||| ||||||    
T  19214476 tataagttgtttgtataagctatattgtagaacttatgaaaataagttgaaacaagtttatgaaaattgtcatttgctgttttcataagttctcccaaac 19214377  T
Q  249 agtcttacaaaacatatg 266  Q
    | ||| ||||||| ||||    
T  19214376 aatctcacaaaacttatg 19214359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 129 - 259
Target Start/End: Original strand, 17248534 - 17248662
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    |||||||||||||||||  ||||||||   |||| |||||  |||||||||||||||||||  |||| | ||  || |||||||| | ||| ||||||||    
T  17248534 ttaaattgtttttgtataagctataagctcttttcataag--atcttagagaacttatgaaaataaggtaaatcag-cttatgaacaatgttataagctg 17248630  T
Q  228 ttttcataagttcttccaaacagtcttacaaa 259  Q
    |||| ||||||||| |||||||||||||||||    
T  17248631 tttttataagttctcccaaacagtcttacaaa 17248662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 129 - 260
Target Start/End: Original strand, 20526425 - 20526557
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||| | ||||||  |||||||||  ||||| ||||||||| || ||||||| |||||  |||||| ||||  ||||| ||||| ||| |||| |||    
T  20526425 ttaaattatgtttgtacatgctataagctgttttcataagctattttggagaactaatgaaaataagctaaaaacagcttacgaaaaatgtgataaactg 20526524  T
Q  228 ttttcataagttcttccaaacagtcttacaaaa 260  Q
    ||||||||||||||  |||||||||| ||||||    
T  20526525 ttttcataagttctctcaaacagtctcacaaaa 20526557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 205 - 261
Target Start/End: Original strand, 27288003 - 27288059
Alignment:
Q  205 cttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaac 261  Q
    |||||||||| ||| |||||||||||||||||||||||||||| ||||| |||||||    
T  27288003 cttatgaaaattgttataagctgttttcataagttcttccaaatagtctcacaaaac 27288059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 32287404 - 32287452
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  32287404 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacac 32287452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 129 - 223
Target Start/End: Original strand, 48507701 - 48507797
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatc-ttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataa 223  Q
    ||||||||||||||||| ||||||||   ||||| |||||| ||| |||||||||||||||| |||||||||||||  ||||| |||| ||||||||    
T  48507701 ttaaattgtttttgtatatgctataaactgttttcataagccatccttagagaacttatgaaattaagctgaaaaatacttataaaaaatgtcataa 48507797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 493 - 544
Target Start/End: Complemental strand, 1433577 - 1433526
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacacatg 544  Q
    ||||||||||||||||||||| ||||||  ||||||||||||||||||||||    
T  1433577 tatgaagcacggacactcctcggattagacgtgtcctggtgtcggacacatg 1433526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 131 - 288
Target Start/End: Complemental strand, 4970882 - 4970723
Alignment:
Q  131 aaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttat-gaaaagtgtcataagctgt 228  Q
    ||||||||||||||| ||||||||||  |||| ||||| ||| ||||||||||||||||  ||| |||||      || | ||||| || |||||| |||    
T  4970882 aaattgtttttgtatatgctataagttctttttataagatatattagagaacttatgaaaataaactgaatttttttttttgaaaattgccataagttgt 4970783  T
Q  229 tttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||||||||||| ||||||||||| |||| || |||||||   ||||||||| ||||||    
T  4970782 tttcataagttctcccaaacagtctcacaagacttatgtcacgagataagctcaaataag 4970723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 159 - 233
Target Start/End: Complemental strand, 39630017 - 39629943
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttca 233  Q
    |||| |||||||| ||  ||||||||||| | |||| ||||||| ||||||||||| ||||||||||||||||||    
T  39630017 ttttttaagctatattgaagaacttatgactataagttgaaaaaagcttatgaaaattgtcataagctgttttca 39629943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 5409772 - 5409820
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| ||||||| |||||| ||||||||||||    
T  5409772 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacac 5409820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 247
Target Start/End: Original strand, 5947198 - 5947282
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaa 247  Q
    |||||||||||  ||||| |||||||  |||||||||||  ||||||||||| || ||||||||| ||||| ||||||| |||||    
T  5947198 ataagctatctaggagaagttatgaaaataagctgaaaagagcttatgaaaaatgccataagctggtttcaaaagttctaccaaa 5947282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 205 - 261
Target Start/End: Complemental strand, 22940070 - 22940014
Alignment:
Q  205 cttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaac 261  Q
    |||||||||| ||| ||||| |||||||||||||||||||||| ||||| |||||||    
T  22940070 cttatgaaaattgttataagttgttttcataagttcttccaaatagtctcacaaaac 22940014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 29763130 - 29763178
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| ||||||| |||||||| ||||||||||    
T  29763130 tatgaagcacggacactcctcggattaggcgtgtcctgatgtcggacac 29763178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 21880270 - 21880223
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggaca 540  Q
    ||||||||||||||||| ||| ||||||| ||||||||||||||||||    
T  21880270 tatgaagcacggacacttctcggattaggcgtgtcctggtgtcggaca 21880223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 246
Target Start/End: Original strand, 28614443 - 28614530
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaa 246  Q
    ||||| ||||| | || ||||||||||||| |||| |||||||| |||| |||||| ||| ||| | |||||||||||||||| ||||    
T  28614443 ttttaaaagctgtattggagaacttatgaaattaaactgaaaaaagcttgtgaaaattgttatatgttgttttcataagttctcccaa 28614530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 129 - 224
Target Start/End: Original strand, 45338428 - 45338523
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataag 224  Q
    ||||||||||||||||| |||| ||||| ||||| |||||||| || ||||||| |||||  |||| |||||||  || || |||| |||||||||    
T  45338428 ttaaattgtttttgtatatgctgtaagttgttttttaagctatattggagaactgatgaaaataagttgaaaaaaactaataaaaattgtcataag 45338523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 252
Target Start/End: Complemental strand, 3308344 - 3308218
Alignment:
Q  128 attaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatga-aaagtgtcataagc 225  Q
    |||||||||||| | ||| |||||||||   |||| | ||| ||| || |||||||||| ||  |||||||||||| |||||||| ||| || |||||||    
T  3308344 attaaattgtttatttatatgctataagatattttcagaagttatgtttgagaacttattaaaataagctgaaaaaagcttatgagaaaatggcataagc 3308245  T
Q  226 tgttttcataagttcttccaaacagtc 252  Q
    | |||||| ||||||| ||||||||||    
T  3308244 tattttcaaaagttctcccaaacagtc 3308218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 251
Target Start/End: Complemental strand, 3836739 - 3836652
Alignment:
Q  162 tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagt 251  Q
    ||||||||||||| |||| || |||||  |||| |||| | |||||||| ||  ||||||||||| |||||||||||||| |||||||||    
T  3836739 tataagctatcttggagagctaatgaaaataagttgaagacggcttatgtaa--tgtcataagctattttcataagttctcccaaacagt 3836652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 169 - 230
Target Start/End: Original strand, 20428494 - 20428555
Alignment:
Q  169 tatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttt 230  Q
    |||||||| ||||||| |||  |||||||||||| |||||||| || |||||||||||||||    
T  20428494 tatcttagggaacttacgaaaataagctgaaaaaagcttatgagaactgtcataagctgttt 20428555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 198 - 287
Target Start/End: Complemental strand, 34464242 - 34464153
Alignment:
Q  198 aaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataa 287  Q
    ||||| |||| |||||| ||||||||||||||||||||||| || ||||| ||||||  ||||  ||||||| | ||||| ||| |||||    
T  34464242 aaaaaagcttgtgaaaattgtcataagctgttttcataagtcctcccaaaaagtcttgtaaaatttatgtcaatagataaactcaaataa 34464153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 493 - 554
Target Start/End: Complemental strand, 35750005 - 35749944
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacacatgaccccgacac 554  Q
    |||||||||| |||||||||| || ||||||||||| ||| ||||||||| ||| |||||||    
T  35750005 tatgaagcacagacactcctccgactaggtgtgtcccggtttcggacacacgacaccgacac 35749944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 598326 - 598278
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||| ||| ||||||| |||||| ||||||||||||    
T  598326 tatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacac 598278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 6490834 - 6490786
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| ||||| | |||||| ||||||||||||    
T  6490834 tatgaagcacggacactcctcggattaagcgtgtcccggtgtcggacac 6490786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 7133213 - 7133261
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    |||||||||||||| |||||| ||||||||||||||  |||||||||||    
T  7133213 tatgaagcacggacgctcctcagattaggtgtgtcccagtgtcggacac 7133261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 9778623 - 9778575
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||  ||||||| |||||| ||||||||||||    
T  9778623 tatgaagcacggacactccttggattaggcgtgtcccggtgtcggacac 9778575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 17852118 - 17852070
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    |||||||||||||||||||||  ||||||||||||  ||||||||||||    
T  17852118 tatgaagcacggacactcctcgaattaggtgtgtctcggtgtcggacac 17852070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 231 - 287
Target Start/End: Original strand, 18765366 - 18765422
Alignment:
Q  231 tcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataa 287  Q
    ||||||||||| ||||||||||| ||||||| ||||||| | ||||||||| |||||    
T  18765366 tcataagttctcccaaacagtctcacaaaacttatgtcaatagataagctcaaataa 18765422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 30813915 - 30813867
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| ||||||| |||| ||| ||||||||||    
T  30813915 tatgaagcacggacactcctcggattaggcgtgttctgatgtcggacac 30813867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 43027405 - 43027453
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    |||||||||||||||||| || ||||||| |||||| ||||||||||||    
T  43027405 tatgaagcacggacactcatcggattaggcgtgtcccggtgtcggacac 43027453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 497 - 541
Target Start/End: Complemental strand, 43250118 - 43250074
Alignment:
Q  497 aagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    |||||||||||||||||  |||||| |||||||||||||||||||    
T  43250118 aagcacggacactcctcgaattaggcgtgtcctggtgtcggacac 43250074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 253
Target Start/End: Original strand, 48131565 - 48131656
Alignment:
Q  161 ttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtct 253  Q
    |||||| ||||| | |||| ||||||| | |||||||||||  | ||||||||| ||||||||  | ||||| ||||||||||||||||||||    
T  48131565 ttataatctatcctggagagcttatgagtataagctgaaaatagtttatgaaaa-tgtcataacttattttcgtaagttcttccaaacagtct 48131656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 1401141 - 1401094
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggaca 540  Q
    ||||||||| ||||||||||| |||||||||||||| | |||||||||    
T  1401141 tatgaagcatggacactcctcagattaggtgtgtcccgatgtcggaca 1401094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 177 - 260
Target Start/End: Complemental strand, 20526971 - 20526888
Alignment:
Q  177 agaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaa 260  Q
    ||||||||||||  |||||||||||   ||||| || | | ||||||||||||||||| ||||||  |||||||||| ||||||    
T  20526971 agaacttatgaaaataagctgaaaagatcttataaacaatctcataagctgttttcatcagttctctcaaacagtctcacaaaa 20526888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 223
Target Start/End: Complemental strand, 38138566 - 38138475
Alignment:
Q  133 attgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataa 223  Q
    |||| |||||||| |||||||||| ||||| || |||||| ||   |||||||||||  |||| ||||||| ||||||||||| ||||||||    
T  38138566 attgattttgtatatgctataagttgtttttattagctatattgacgaacttatgaaaataagttgaaaaaagcttatgaaaattgtcataa 38138475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 499 - 541
Target Start/End: Original strand, 18215144 - 18215186
Alignment:
Q  499 gcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||| ||||||| |||||| ||||||||||||    
T  18215144 gcacggacactcctcagattaggcgtgtcccggtgtcggacac 18215186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 229 - 287
Target Start/End: Complemental strand, 18962573 - 18962515
Alignment:
Q  229 tttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataa 287  Q
    ||||||||||||| | ||||||||| ||||||| ||||||||| |||||| || |||||    
T  18962573 tttcataagttctccaaaacagtctaacaaaacttatgtcagtagataagatcgaataa 18962515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 147 - 224
Target Start/End: Complemental strand, 28341129 - 28341052
Alignment:
Q  147 tgctataagtggttt-tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataag 224  Q
    |||||||||| |||| ||||| |||| ||||||||||||||||  ||||||| |||| |||| |||||| |||||||||    
T  28341129 tgctataagttgtttgtataaactatattagagaacttatgaa-ataagctggaaaaagcttttgaaaattgtcataag 28341052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 540
Target Start/End: Original strand, 28943351 - 28943397
Alignment:
Q  494 atgaagcacggacactcctctgattaggtgtgtcctggtgtcggaca 540  Q
    |||||||||||||||||||| ||||||||||||  |||| |||||||    
T  28943351 atgaagcacggacactcctcagattaggtgtgttatggtttcggaca 28943397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 253
Target Start/End: Original strand, 30535577 - 30535666
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtct 253  Q
    ||||||||||||| ||||| ||||||  ||| |||||||  ||||| ||| | | ||||||| |||||||||||||||| | |||||||||    
T  30535577 ataagctatcttatagaacatatgaaaataacctgaaaacagcttacgaaca-tatcataagttgttttcataagttctccaaaacagtct 30535666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 254
Target Start/End: Complemental strand, 33552855 - 33552817
Alignment:
Q  216 tgtcataagctgttttcataagttcttccaaacagtctt 254  Q
    ||||||||||||||||| |||||||| ||||||||||||    
T  33552855 tgtcataagctgttttcgtaagttctcccaaacagtctt 33552817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 266
Target Start/End: Original strand, 33678759 - 33678897
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    |||||| |||||||||   ||||||||  ||||| |||||||||||| || ||||| ||||  |||| ||||||   || ||||| | ||| ||||| ||    
T  33678759 ttaaatggtttttgtaaaagctataagctgttttcataagctatcttggaaaacttgtgaaaataagttgaaaacatctcatgaacaatgttataagttg 33678858  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatg 266  Q
    |||||||||||||| |||||  |||| ||||||| ||||    
T  33678859 ttttcataagttctcccaaattgtctcacaaaacttatg 33678897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 493 - 535
Target Start/End: Complemental strand, 35862069 - 35862027
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtc 535  Q
    ||||||||||||||||||||| ||||||| ||||||| |||||    
T  35862069 tatgaagcacggacactcctcggattaggcgtgtcctcgtgtc 35862027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 288
Target Start/End: Complemental strand, 37064555 - 37064399
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttta-taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    |||||||||||||  || |||||||||  |||||  |||||||| |||||| |||||||||  ||||||||||||   ||||||||  |||| ||||  |    
T  37064555 ttaaattgtttttacatatgctataagctgttttcgtaagctattttagaggacttatgaaaataagctgaaaaa--tttatgaaa--tgtcgtaagtgg 37064460  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||||||||| || || |||| ||| ||| ||| ||| ||||| |||||| || ||||||    
T  37064459 ttttcataagtgctcccgaacaatctaacagaacttatatcagtagataagatcaaataag 37064399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 45790485 - 45790404
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttct 241  Q
    |||||||| |||| || || ||||||||||  |||||||||||| |||| | |||| ||||||||| | ||||||||||||||    
T  45790485 ttttataaactatattggataacttatgaaaataagctgaaaaa-gcttttaaaaattgtcataagttattttcataagttct 45790404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 266
Target Start/End: Complemental strand, 3928052 - 3927963
Alignment:
Q  177 agaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatg 266  Q
    ||||||||||||  |||| ||||||| ||||||||||| ||||||||  |||||| | || ||||  |||| ||||| ||||||| ||||    
T  3928052 agaacttatgaaaataagttgaaaaaagcttatgaaaattgtcataaattgttttaaaaaattctctcaaatagtctcacaaaacttatg 3927963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 261
Target Start/End: Original strand, 14768395 - 14768436
Alignment:
Q  220 ataagctgttttcataagttcttccaaacagtcttacaaaac 261  Q
    |||||||||||||||||| ||||||||||||| | |||||||    
T  14768395 ataagctgttttcataagctcttccaaacagtgtcacaaaac 14768436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 538
Target Start/End: Complemental strand, 24339771 - 24339726
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcgga 538  Q
    |||||||||||| |||||||| ||||||| |||||| |||||||||    
T  24339771 tatgaagcacgggcactcctcggattaggcgtgtcccggtgtcgga 24339726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 544
Target Start/End: Original strand, 27093364 - 27093405
Alignment:
Q  503 ggacactcctctgattaggtgtgtcctggtgtcggacacatg 544  Q
    |||||||| || ||||||||||||||| ||||||||||||||    
T  27093364 ggacactcatcggattaggtgtgtcctagtgtcggacacatg 27093405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 503 - 544
Target Start/End: Complemental strand, 27184937 - 27184896
Alignment:
Q  503 ggacactcctctgattaggtgtgtcctggtgtcggacacatg 544  Q
    |||||||| || ||||||||||||||| ||||||||||||||    
T  27184937 ggacactcatcggattaggtgtgtcctagtgtcggacacatg 27184896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 177 - 233
Target Start/End: Original strand, 28900903 - 28900960
Alignment:
Q  177 agaacttatgaatttaagctgaaaaaggcttatga-aaagtgtcataagctgttttca 233  Q
    ||||||||||||  ||||||||||||| |||| || ||| ||||||||||||||||||    
T  28900903 agaacttatgaaaataagctgaaaaagccttacgagaaaatgtcataagctgttttca 28900960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 237
Target Start/End: Original strand, 39279941 - 39280050
Alignment:
Q  129 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||| ||||| || |||| | || ||| ||||  |||||| |||||||| ||||  |||||||||||| ||||||| ||| ||  ||||||||    
T  39279941 ttaaattgtttgtgtatatgttataggctgatttcataaattatcttggagaacttttgaaaataagctgaaaaaagcttatgtaaaatgctataagctg 39280040  T
Q  228 ttttcataag 237  Q
    |||| |||||    
T  39280041 tttttataag 39280050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 201
Target Start/End: Original strand, 39907782 - 39907855
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaa 201  Q
    |||||||||||||||||  |||||||   ||||| |||| ||||||||||||||| |||||  |||||||||||    
T  39907782 ttaaattgtttttgtataagctataaactgttttcataaactatcttagagaactaatgaaaataagctgaaaa 39907855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 129 - 188
Target Start/End: Original strand, 7467588 - 7467648
Alignment:
Q  129 ttaaattgttttt-gtatttgctataagtggttttataagctatcttagagaacttatgaa 188  Q
    ||||||||||||| |||| ||||||||||| ||| | ||| |||||||| |||||||||||    
T  7467588 ttaaattgttttttgtatatgctataagtgatttcagaagttatcttagtgaacttatgaa 7467648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 14729821 - 14729773
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||| ||||||||||||| ||||| | |||||| ||||||||||||    
T  14729821 tatgaagtacggacactcctcggattaagcgtgtcccggtgtcggacac 14729773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 128 - 171
Target Start/End: Original strand, 20234461 - 20234505
Alignment:
Q  128 attaaattgtttttgtatttgctataagtggtttta-taagctat 171  Q
    ||||||||||||||||| ||||||||||| |||||| ||||||||    
T  20234461 attaaattgtttttgtaattgctataagttgttttactaagctat 20234505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 21138932 - 21138980
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||| |||||||  |||||| | |||||||||||||||||||    
T  21138932 tatgaagcacgaacactcccttgattaagcgtgtcctggtgtcggacac 21138980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 28155672 - 28155624
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||| ||||  ||||||| ||||||||||||| |||||    
T  28155672 tatgaagcacggacattccttggattaggcgtgtcctggtgtccgacac 28155624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 540
Target Start/End: Original strand, 40287306 - 40287350
Alignment:
Q  496 gaagcacggacactcctctgattaggtgtgtcctggtgtcggaca 540  Q
    |||||||||||||||||| |||||||  ||||| |||||||||||    
T  40287306 gaagcacggacactcctcggattaggcatgtcccggtgtcggaca 40287350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 162 - 238
Target Start/End: Complemental strand, 43250756 - 43250681
Alignment:
Q  162 tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagt 238  Q
    |||||||||| || |||| ||||||||| ||| |||||||   |||| ||| | |||||||||||||||||||||||    
T  43250756 tataagctattttggagagcttatgaatataaactgaaaacaacttacgaaca-tgtcataagctgttttcataagt 43250681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 43694661 - 43694601
Alignment:
Q  129 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaa 188  Q
    ||||||||||||||||| ||||||||| || ||||||||||||| |   ||||||||||||    
T  43694661 ttaaattgtttttgtatatgctataagctgtttttataagctatatcgaagaacttatgaa 43694601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 266
Target Start/End: Complemental strand, 44989734 - 44989630
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaag-gcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaac 261  Q
    ||||| ||||||  |||| |||||||  ||||||| ||||  |||| |||| | ||||| ||| |||||||||||||| | ||||||||||| |||||||    
T  44989734 ataagatatcttgtagaaattatgaaaataagctgcaaaacagcttgtgaacaatgtcagaagttgttttcataagttttcccaaacagtctcacaaaac 44989635  T
Q  262 atatg 266  Q
     ||||    
T  44989634 ttatg 44989630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 453 - 489
Target Start/End: Complemental strand, 46781727 - 46781691
Alignment:
Q  453 ttaggaacattttagttgattttaatagtttagggac 489  Q
    ||||| |||||||||||||||||||||| ||||||||    
T  46781727 ttagggacattttagttgattttaatagattagggac 46781691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 2e-38; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 129 - 281
Target Start/End: Original strand, 26771244 - 26771397
Alignment:
Q  129 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||||| ||||||||| |  ||||||||| ||| ||||||||||||||||  |||| |||||||||||| |||||| ||||||||||||    
T  26771244 ttaaattgtttttgtatatgctataagctttttttataagatatattagagaacttatgaaaataagttgaaaaaggcttttgaaaattgtcataagctg 26771343  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctc 281  Q
    |||||||||||||| ||||||||||| ||||||| |||| | || |||||||||    
T  26771344 ttttcataagttctcccaaacagtctcacaaaacttatgcccgtagataagctc 26771397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 128 - 277
Target Start/End: Original strand, 38648329 - 38648479
Alignment:
Q  128 attaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagct 226  Q
    ||||| |||||||||||| || ||| ||| ||||| ||||||||||||  |||||||||||| ||| ||| ||||| |||||||| || |||||| ||||    
T  38648329 attaacttgtttttgtatatgttatgagttgttttcataagctatcttgtagaacttatgaaattacgcttaaaaaagcttatgagaactgtcatgagct 38648428  T
Q  227 gttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataa 277  Q
    ||||||||||| ||| ||||||||||| ||||||| ||||||||| |||||    
T  38648429 gttttcataaggtctcccaaacagtctcacaaaacttatgtcagtagataa 38648479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 129 - 288
Target Start/End: Complemental strand, 10758347 - 10758188
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggt-tttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||||| |||||||||| || |||||||||||| ||||  ||||||||||   ||||||||||| |||| |||||| ||||||||||||    
T  10758347 ttaaattgtttttgtatatgctataagttgtctttataagctatattagc-aacttatgaaaacaagctgaaaaaagcttttgaaaattgtcataagctg 10758249  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||||||| ||||  |||||||||| ||||||| ||||| ||  |||||| || ||||||    
T  10758248 ttttcataaattctatcaaacagtctcacaaaacttatgttagcagataagttcaaataag 10758188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 129 - 288
Target Start/End: Original strand, 27028810 - 27028970
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||| ||||| |||||||||  ||||| |||||||||||| |||| ||||||||  |||||||||||  ||||||||||| |||| |||||||    
T  27028810 ttaaattgtttgtgtatatgctataagctgttttcataagctatcttggagagcttatgaaaataagctgaaaatagcttatgaaaaatgtcctaagctg 27028909  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    |||||| || |||| ||||||| ||| || |||| |||| |||||||||| ||| ||||||    
T  27028910 ttttcagaatttctcccaaacaatctcactaaacttatgccagtggataaactcaaataag 27028970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 134 - 288
Target Start/End: Complemental strand, 30251540 - 30251385
Alignment:
Q  134 ttgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttc 232  Q
    ||||| |||||| || ||||||  ||||| |||||||||||| ||  |||||||||  ||||||| |||| ||||||||||| ||  |||||||||||||    
T  30251540 ttgttattgtatatgttataagctgttttcataagctatcttggaccacttatgaaaataagctgtaaaaagcttatgaaaaatgcaataagctgttttc 30251441  T
Q  233 ataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
     |||||||| ||||||||||| || |||| ||||||||| ||||||||| ||||||    
T  30251440 gtaagttctcccaaacagtctcacgaaacttatgtcagtagataagctcaaataag 30251385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 129 - 261
Target Start/End: Original strand, 18133635 - 18133768
Alignment:
Q  129 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    |||||||| |||||||| | ||||||| ||||||||||| |||| || |||||||||||||  |||||||||||| |||| |||||| ||| ||||||||    
T  18133635 ttaaattgcttttgtatatcctataagctggttttataaactatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgttataagctg 18133734  T
Q  228 ttttcataagttcttccaaacagtcttacaaaac 261  Q
     ||||| ||| ||| ||||||||||| |||||||    
T  18133735 atttcacaagctctcccaaacagtctcacaaaac 18133768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 129 - 288
Target Start/End: Complemental strand, 35534702 - 35534544
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||||| |  |||| || ||||| ||||| ||| || |||||||||||||  ||||| |||||| |||| | |||| ||||||||||||    
T  35534702 ttaaattgtttttgtatgt--tatatgttgttttcataagttatattggagaacttatgaaagtaagccgaaaaaagcttgttaaaattgtcataagctg 35534605  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    |||||| |||||||  |||||||||| ||||||| ||||| ||| ||||||||| ||||||    
T  35534604 ttttcacaagttctctcaaacagtctcacaaaacttatgttagtagataagctcaaataag 35534544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 159 - 288
Target Start/End: Original strand, 12976223 - 12976351
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaa 258  Q
    ||||||||||||| |||||||||||||||| | ||||||||||| |||| |||||| ||| | |||||||| ||||||||||| | ||||||||| ||||    
T  12976223 ttttataagctatattagagaacttatgaaat-aagctgaaaaaagcttttgaaaattgttagaagctgttctcataagttctactaaacagtctcacaa 12976321  T
Q  259 aacatatgtcagtggataagctctaataag 288  Q
    | | ||||  ||| ||||||||| ||||||    
T  12976322 accttatgctagtagataagctcaaataag 12976351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 1058126 - 1058008
Alignment:
Q  169 tatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtc 268  Q
    |||||| |||||||||||||  ||||| ||||||  || ||||||| |||||||||| ||||||| ||||||| ||||||||||| ||||||| |||||     
T  1058126 tatcttggagaacttatgaaaataagcggaaaaaa-ctaatgaaaaatgtcataagcagttttcaaaagttctcccaaacagtctcacaaaacttatgta 1058028  T
Q  269 agtggataagctctaataag 288  Q
    ||| ||||||||| ||||||    
T  1058027 agtagataagctcaaataag 1058008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 131 - 264
Target Start/End: Complemental strand, 29168146 - 29168012
Alignment:
Q  131 aaattgtttttgtatttgctataagtggtttta-taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgtt 229  Q
    ||||| ||||||||| |||||||||  |||||  | ||||||||| ||||||||||| |  |||||||| |||   ||||||||| |||||||| |||||    
T  29168146 aaattatttttgtatatgctataagctgttttcctgagctatcttggagaacttatggaaataagctgagaaacatttatgaaaaatgtcataatctgtt 29168047  T
Q  230 ttcataagttcttccaaacagtcttacaaaacata 264  Q
    || ||||||||| ||||||||||| ||||||||||    
T  29168046 tttataagttctcccaaacagtctcacaaaacata 29168012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 163 - 288
Target Start/End: Complemental strand, 31716283 - 31716158
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaaca 262  Q
    |||||||||||| ||||| ||||  |  |||||||||||| ||||||||| | |||||||||||||||||| ||||||| | ||||||||| | |||| |    
T  31716283 ataagctatcttggagaagttatagaaataagctgaaaaaagcttatgaagaatgtcataagctgttttcaaaagttctccgaaacagtctcaaaaaaaa 31716184  T
Q  263 tatgtcagtggataagctctaataag 288  Q
    |||| || | ||||||||| ||||||    
T  31716183 tatgccaatagataagctcaaataag 31716158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 131 - 269
Target Start/End: Original strand, 6881908 - 6882047
Alignment:
Q  131 aaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaag-gcttatgaaaagtgtcataagctgtt 229  Q
    ||||||||||| ||| |||||||||  |||||||||||||  || |||||||||||||  |||||  |||||  |||| | |||| | |||| |||||||    
T  6881908 aaattgtttttatatatgctataagctgttttataagctaaattggagaacttatgaaaataagcaaaaaaaaagcttgttaaaattatcatgagctgtt 6882007  T
Q  230 ttcataagttcttccaaacagtcttacaaaacatatgtca 269  Q
    |||||| ||||| ||||||||||| ||||||| |||||||    
T  6882008 ttcataggttctcccaaacagtctcacaaaacttatgtca 6882047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 198 - 267
Target Start/End: Original strand, 28763417 - 28763486
Alignment:
Q  198 aaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgt 267  Q
    ||||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||| ||||||| |||||    
T  28763417 aaaaaagcttatgaaaattgttataagctgttttcataagttctcccaaacagtctcacaaaacttatgt 28763486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 288
Target Start/End: Complemental strand, 35644031 - 35643919
Alignment:
Q  176 gagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggat 275  Q
    |||| ||||||||  |||| ||||||| ||||||||||| |||||||| || |||||||||||| | ||||||||||| ||||||  |||| |||| |||    
T  35644031 gagagcttatgaaaataagttgaaaaaagcttatgaaaattgtcataaactattttcataagttatcccaaacagtctcacaaaaattatgccagtagat 35643932  T
Q  276 aagctctaataag 288  Q
    |||| | ||||||    
T  35643931 aagcccaaataag 35643919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 128 - 241
Target Start/End: Complemental strand, 25930646 - 25930531
Alignment:
Q  128 attaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtca-taagc 225  Q
    |||||| ||||||||||| |||| ||| | ||||| |||||||||||| |||||||| |||   |||||||||||| ||||| ||||||||||| ||||     
T  25930646 attaaaatgtttttgtatatgctttaaattgttttcataagctatcttggagaacttgtgatagtaagctgaaaaaagcttacgaaaagtgtcattaaga 25930547  T
Q  226 tgttttcataagttct 241  Q
    | ||||||||||||||    
T  25930546 ttttttcataagttct 25930531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 163 - 281
Target Start/End: Complemental strand, 35749626 - 35749508
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaaca 262  Q
    ||||||||||||| ||||||||||||  || | ||||||| | ||||||||| ||  | ||||||||||||||||||||  ||||||| ||  ||||||     
T  35749626 ataagctatcttaaagaacttatgaaaatatgttgaaaaaagtttatgaaaaatgctacaagctgttttcataagttctctcaaacagcctcgcaaaact 35749527  T
Q  263 tatgtcagtggataagctc 281  Q
    ||||||| | |||||||||    
T  35749526 tatgtcaatagataagctc 35749508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 8146362 - 8146427
Alignment:
Q  182 ttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaa 247  Q
    ||||||| |||||||| ||||  ||||||||||||||||||| ||||||||||||||||| |||||    
T  8146362 ttatgaaattaagctggaaaaaacttatgaaaagtgtcataaactgttttcataagttctcccaaa 8146427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 176 - 252
Target Start/End: Original strand, 10120783 - 10120859
Alignment:
Q  176 gagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtc 252  Q
    |||||||||||||  |||||||||||  || ||||| || ||||||||||||||||||||||||||  |||||||||    
T  10120783 gagaacttatgaaaataagctgaaaacagcatatgataaatgtcataagctgttttcataagttctctcaaacagtc 10120859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 29510234 - 29510282
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  29510234 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacac 29510282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 163 - 278
Target Start/End: Original strand, 1930049 - 1930164
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaaca 262  Q
    |||||||||||| | || ||| ||||  |||||||||||  ||||||||| | |||||||| ||||||||| ||||||| ||||| | | | |||||||     
T  1930049 ataagctatcttggtgaccttgtgaaaataagctgaaaacagcttatgaacaatgtcataaactgttttcacaagttctcccaaataatgtcacaaaact 1930148  T
Q  263 tatgtcagtggataag 278  Q
    ||||||||| ||||||    
T  1930149 tatgtcagtagataag 1930164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 161 - 280
Target Start/End: Complemental strand, 43045783 - 43045664
Alignment:
Q  161 ttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaa 260  Q
    |||||| |||| || |||||||||||||  |||| ||||||| |||||| |||| |||  ||||||||||||||||| ||| | ||||||||| |||||     
T  43045783 ttataaactatattggagaacttatgaaaataagttgaaaaaagcttattaaaattgttgtaagctgttttcataagatctccaaaacagtctcacaaat 43045684  T
Q  261 catatgtcagtggataagct 280  Q
    | ||||  ||| ||||||||    
T  43045683 cttatgctagtagataagct 43045664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 191 - 281
Target Start/End: Complemental strand, 32841014 - 32840924
Alignment:
Q  191 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctc 281  Q
    |||||||||||   |||||||| | ||||||||| |||||||||||||||| |||||||||||  |||||| | ||| ||| |||||||||    
T  32841014 taagctgaaaacaacttatgaacaatgtcataagttgttttcataagttctcccaaacagtctcgcaaaacttgtgtgagtagataagctc 32840924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 129 - 247
Target Start/End: Original strand, 37945576 - 37945694
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgt 228  Q
    |||||||  |||||||| |||||||  || ||||||||||||| ||  | ||||| ||||  |||| | ||||| ||||||| ||| |||||||||||||    
T  37945576 ttaaattaattttgtatatgctatagttgtttttataagctatattgtacaacttctgaaaataagttaaaaaatgcttatggaaattgtcataagctgt 37945675  T
Q  229 tttcataagttcttccaaa 247  Q
    ||||| ||||||| |||||    
T  37945676 tttcagaagttctcccaaa 37945694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 163 - 288
Target Start/End: Complemental strand, 43717993 - 43717865
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtc---ataagctgttttcataagttcttccaaacagtcttacaaa 259  Q
    |||||||||||| |||||||||||||  |||||| ||||  ||||||||    ||||   |||  ||||||||||||||||| ||||| ||||| |||||    
T  43717993 ataagctatcttggagaacttatgaaagtaagctaaaaacagcttatgagcgatgtcctcatagtctgttttcataagttctcccaaatagtctcacaaa 43717894  T
Q  260 acatatgtcagtggataagctctaataag 288  Q
    || ||||||| | ||||||||| ||||||    
T  43717893 acttatgtcaatagataagctcaaataag 43717865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 241
Target Start/End: Complemental strand, 16825628 - 16825516
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggttt-tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||| |  | ||||||| |||| || ||||||| ||   |||||||||||  |||| |||||||| |||||||||| |||||||||||     
T  16825628 ttaaattgtttttgtttacgttataagttgtttctacaagctatattgccgaacttatgaaaataagttgaaaaag-cttatgaaaattgtcataagcta 16825530  T
Q  228 ttttcataagttct 241  Q
    ||||||||||||||    
T  16825529 ttttcataagttct 16825516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 241
Target Start/End: Original strand, 29205787 - 29205899
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||||| ||||||||||  |||| |||| |||| || ||||| |||||||  || | | |||||| |||||||||| ||||||| ||||    
T  29205787 ttaaattgtttttgtatatgctataagttattttcataaactattttggagaatttatgaaagtaggttaaaaaag-cttatgaaaaatgtcatacgctg 29205885  T
Q  228 ttttcataagttct 241  Q
    |||| |||||||||    
T  29205886 ttttaataagttct 29205899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 199 - 288
Target Start/End: Complemental strand, 36963374 - 36963285
Alignment:
Q  199 aaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    |||| |||| |||||| ||||| ||||||||||  |||||||| ||||||||||| ||||||| |||| |||| ||| ||||| ||||||    
T  36963374 aaaaagcttttgaaaattgtcaaaagctgtttttgtaagttctcccaaacagtctcacaaaacttatgccagtagattagctcaaataag 36963285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 36450695 - 36450743
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    |||||||||| |||||||||| ||||||| |||||||||||||||||||    
T  36450695 tatgaagcacagacactcctcggattaggcgtgtcctggtgtcggacac 36450743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 159 - 261
Target Start/End: Original strand, 16347200 - 16347303
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtca-taagctgttttcataagttcttccaaacagtcttaca 257  Q
    |||||||| |||||||   ||||||||||  |||||||||| || ||||||||||||||||| |||  ||||||||||||  |  ||||||||||| |||    
T  16347200 ttttataaactatcttgttgaacttatgatattaagctgaataaagcttatgaaaagtgtcattaacttgttttcataaggccacccaaacagtctcaca 16347299  T
Q  258 aaac 261  Q
    ||||    
T  16347300 aaac 16347303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 493 - 544
Target Start/End: Complemental strand, 22652105 - 22652054
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacacatg 544  Q
    ||||||||||||||||||||| ||||||  |||||| |||||||||||||||    
T  22652105 tatgaagcacggacactcctcggattagacgtgtcccggtgtcggacacatg 22652054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 493 - 544
Target Start/End: Original strand, 29447040 - 29447091
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacacatg 544  Q
    ||||||||||||||||||||  ||||||| ||||||||||||| ||||||||    
T  29447040 tatgaagcacggacactcctaggattaggcgtgtcctggtgtcagacacatg 29447091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 205 - 288
Target Start/End: Complemental strand, 40859796 - 40859714
Alignment:
Q  205 cttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    |||||||||| |||||||||||||||||||||| ||| | |||||| || ||||||| ||||| ||  ||||||||| ||||||    
T  40859796 cttatgaaaattgtcataagctgttttcataag-tctccaaaacagcctcacaaaacttatgttagcagataagctcaaataag 40859714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 494 - 541
Target Start/End: Complemental strand, 44067644 - 44067597
Alignment:
Q  494 atgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||||    
T  44067644 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacac 44067597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 493 - 542
Target Start/End: Original strand, 30067969 - 30068018
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacaca 542  Q
    |||||||||||||||||| || ||||||||||||||  ||||||||||||    
T  30067969 tatgaagcacggacactcatcggattaggtgtgtcccagtgtcggacaca 30068018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 493 - 542
Target Start/End: Complemental strand, 40064080 - 40064031
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacaca 542  Q
    |||| |||||||||||||||| |||||| ||||||| |||||||||||||    
T  40064080 tatgtagcacggacactcctcggattagatgtgtcccggtgtcggacaca 40064031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 176 - 249
Target Start/End: Complemental strand, 42893533 - 42893460
Alignment:
Q  176 gagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaaca 249  Q
    |||||||||||||  |||||||||||| |||||| ||  |  |||||||||||||| ||||||||| |||||||    
T  42893533 gagaacttatgaaaataagctgaaaaaagcttattaagcgcatcataagctgtttttataagttctcccaaaca 42893460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 496 - 544
Target Start/End: Complemental strand, 4498418 - 4498370
Alignment:
Q  496 gaagcacggacactcctctgattaggtgtgtcctggtgtcggacacatg 544  Q
    |||||||||||||||||||||||||||||||   ||||||||| |||||    
T  4498418 gaagcacggacactcctctgattaggtgtgtttcggtgtcggatacatg 4498370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 150 - 241
Target Start/End: Complemental strand, 9956884 - 9956792
Alignment:
Q  150 tataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttct 241  Q
    ||||||| ||||| |||| ||||||| |||||||||||||  |||||||||||   |||||||| | || ||||| || ||||||||||||||    
T  9956884 tataagttgttttcataatctatcttggagaacttatgaaaataagctgaaaactacttatgaacaatgccataaactattttcataagttct 9956792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 38487158 - 38487206
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    |||||||||| |||||||||| ||||| |||||||| ||||||||||||    
T  38487158 tatgaagcacagacactcctcggattatgtgtgtccgggtgtcggacac 38487206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 204 - 288
Target Start/End: Original strand, 40981159 - 40981243
Alignment:
Q  204 gcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||||||||| ||||||||| |||||||| | ||||| |||||||| ||  ||||||||||  |||| ||||||| | ||||||    
T  40981159 gcttatgaaaaatgtcataagttgttttcaaatgttctcccaaacagcctcgcaaaacatataccagtagataagcccaaataag 40981243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 544
Target Start/End: Complemental strand, 8343085 - 8343034
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacacatg 544  Q
    |||||||||| ||||||| || ||||||| |||||| |||||||||||||||    
T  8343085 tatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacacatg 8343034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 148 - 258
Target Start/End: Complemental strand, 12782257 - 12782146
Alignment:
Q  148 gctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaa 246  Q
    ||||||||| ||||| ||||| |||||||||  | |||||||  | |||||||||  ||||||||| | |||||||  || |||||||||||||||| ||    
T  12782257 gctataagttgttttcataagatatcttagatcatttatgaaacttagctgaaaagagcttatgaacaatgtcatagcctattttcataagttcttcaaa 12782158  T
Q  247 acagtcttacaa 258  Q
    | ||||| ||||    
T  12782157 atagtctcacaa 12782146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 249
Target Start/End: Complemental strand, 13958156 - 13958054
Alignment:
Q  147 tgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttcca 245  Q
    |||||||||  ||||| ||||| ||||| ||| || |||||||| ||| ||| |||| ||||||||||| ||||||||  |||||||| ||||||| |||    
T  13958156 tgctataagctgttttcataagttatctcagaaaaattatgaatataaactggaaaaagcttatgaaaa-tgtcataatttgttttcaaaagttctccca 13958058  T
Q  246 aaca 249  Q
    ||||    
T  13958057 aaca 13958054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 544
Target Start/End: Original strand, 16641910 - 16641961
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacacatg 544  Q
    |||||||||| |||||||||| |||||||||||||| |||||  ||||||||    
T  16641910 tatgaagcacagacactcctcggattaggtgtgtcccggtgttagacacatg 16641961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 18407837 - 18407790
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggaca 540  Q
    |||||||||||||||||||||  |||||| ||||||| ||||||||||    
T  18407837 tatgaagcacggacactcctccaattaggcgtgtcctagtgtcggaca 18407790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 544
Target Start/End: Complemental strand, 29447573 - 29447522
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacacatg 544  Q
    ||||||||||||||||||||| ||||||   ||||| |||||||||||||||    
T  29447573 tatgaagcacggacactcctccgattagacctgtcccggtgtcggacacatg 29447522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 287
Target Start/End: Original strand, 41589641 - 41589724
Alignment:
Q  204 gcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataa 287  Q
    |||| |||||| ||| ||||| |||||||||||||||| | ||||||||| | ||| | ||||||||| || |||||| |||||    
T  41589641 gcttttgaaaattgttataagttgttttcataagttctccaaaacagtctcaaaaagcttatgtcagtagacaagctcaaataa 41589724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 42043436 - 42043377
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatga 187  Q
    |||||||||||||| || || ||||||| ||||| |||||||||||||||||||| ||||    
T  42043436 ttaaattgtttttggatatgatataagttgttttcataagctatcttagagaactaatga 42043377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 10114471 - 10114581
Alignment:
Q  132 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttt 230  Q
    ||||||||| ||||  ||||||||  ||||| || |||||| || |||||| ||||||  |||||||||||  || ||||| || ||| ||||| |||||    
T  10114471 aattgttttggtataagctataagctgttttcattagctatattggagaacatatgaaaataagctgaaaacagcatatgataaatgttataagttgttt 10114570  T
Q  231 tcataagttct 241  Q
    |||||||||||    
T  10114571 tcataagttct 10114581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 544
Target Start/End: Complemental strand, 16988030 - 16987980
Alignment:
Q  494 atgaagcacggacactcctctgattaggtgtgtcctggtgtcggacacatg 544  Q
    |||||||||||||||||||| ||||||| |||||| ||||| || ||||||    
T  16988030 atgaagcacggacactcctcggattaggggtgtcccggtgttgggcacatg 16987980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 266
Target Start/End: Original strand, 27754470 - 27754520
Alignment:
Q  216 tgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatg 266  Q
    |||||||| ||||||||||||||||| ||||| ||||| ||||||| ||||    
T  27754470 tgtcataaactgttttcataagttctcccaaatagtctcacaaaacttatg 27754520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 249
Target Start/End: Original strand, 33808313 - 33808403
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaaca 249  Q
    |||| |||||||||| |  |||||||||||  |||||| ||||   |||||||| | | ||||||||| |||||||||||||| |||||||    
T  33808313 ttttgtaagctatctcaatgaacttatgaaaataagctaaaaacaacttatgaacaatatcataagctattttcataagttctcccaaaca 33808403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 493 - 535
Target Start/End: Original strand, 34127173 - 34127215
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtc 535  Q
    ||||||||||||||||||||  |||||||||||||| ||||||    
T  34127173 tatgaagcacggacactccttggattaggtgtgtccaggtgtc 34127215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 496 - 541
Target Start/End: Complemental strand, 5813707 - 5813662
Alignment:
Q  496 gaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||  |||||| |||||| ||||||||||||    
T  5813707 gaagcacggacactcctccaattaggcgtgtcccggtgtcggacac 5813662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 191 - 240
Target Start/End: Original strand, 10383927 - 10383975
Alignment:
Q  191 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttc 240  Q
    ||||||| |||  ||||||||||| |||||||||||||||||||||||||    
T  10383927 taagctgtaaacagcttatgaaaa-tgtcataagctgttttcataagttc 10383975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 11376769 - 11376842
Alignment:
Q  216 tgtcataagctgttttcataagttcttccaaacagtcttacaa-aacatatgtcagtggataagctctaataag 288  Q
    ||||| ||||| |||||||||||||| ||||| ||||| |||| ||| ||| ||||| ||||||||| ||||||    
T  11376769 tgtcacaagctattttcataagttctcccaaatagtctcacaagaacttatatcagtagataagctcaaataag 11376842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 538
Target Start/End: Original strand, 15816059 - 15816104
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcgga 538  Q
    ||||||||||||||||| ||| ||||||| |||||| |||||||||    
T  15816059 tatgaagcacggacacttctcggattaggcgtgtcccggtgtcgga 15816104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 159 - 252
Target Start/End: Original strand, 43504761 - 43504853
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtc 252  Q
    |||||||||||||||| ||||||||||| |  |||||||||||  |||||| |||   ||| |||| ||||||||| |||||| | ||||||||    
T  43504761 ttttataagctatcttggagaacttatggaaataagctgaaaacagcttat-aaacaagtcgtaagttgttttcatcagttctccgaaacagtc 43504853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 2035866 - 2035818
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    |||||||||||||| || ||| |||||||||| ||| ||||||||||||    
T  2035866 tatgaagcacggacgctactcggattaggtgtctcccggtgtcggacac 2035818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 191 - 243
Target Start/End: Original strand, 3254267 - 3254318
Alignment:
Q  191 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttc 243  Q
    |||||||||||  ||||||||| | ||||||||||||||||| ||||||||||    
T  3254267 taagctgaaaacagcttatgaaca-tgtcataagctgttttcttaagttcttc 3254318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 8343445 - 8343397
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    |||||||||| ||||||| || ||||||| |||||| ||||||||||||    
T  8343445 tatgaagcacagacactcttcggattaggcgtgtcccggtgtcggacac 8343397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 137 - 188
Target Start/End: Original strand, 11861791 - 11861843
Alignment:
Q  137 tttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaa 188  Q
    ||||||||| |||||||||| ||||| |||||||||  |||||||||||||||    
T  11861791 tttttgtatatgctataagttgtttttataagctataatagagaacttatgaa 11861843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 541
Target Start/End: Original strand, 12570443 - 12570487
Alignment:
Q  497 aagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||| || || ||||||| |||||||||||||||||||    
T  12570443 aagcacggacaatcttcagattaggcgtgtcctggtgtcggacac 12570487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 541
Target Start/End: Original strand, 12570669 - 12570713
Alignment:
Q  497 aagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||| || || ||||||| |||||||||||||||||||    
T  12570669 aagcacggacaatcttcagattaggcgtgtcctggtgtcggacac 12570713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 181 - 241
Target Start/End: Original strand, 13459677 - 13459736
Alignment:
Q  181 cttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttct 241  Q
    ||||||||  || ||||||||  | ||||||||| ||||||||||||||||||||||||||    
T  13459677 cttatgaaaataggctgaaaacagtttatgaaaa-tgtcataagctgttttcataagttct 13459736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 14134817 - 14134769
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    |||||| ||||||||||||||  |||||| ||||||||||| |||||||    
T  14134817 tatgaaacacggacactcctcgaattaggcgtgtcctggtgacggacac 14134769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 537
Target Start/End: Complemental strand, 17751774 - 17751730
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcgg 537  Q
    |||||||| |||||||||||| ||||||| |||||| ||||||||    
T  17751774 tatgaagcgcggacactcctcggattaggcgtgtcccggtgtcgg 17751730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 537
Target Start/End: Complemental strand, 17760761 - 17760717
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcgg 537  Q
    |||||||| |||||||||||| ||||||| |||||| ||||||||    
T  17760761 tatgaagcgcggacactcctcggattaggcgtgtcccggtgtcgg 17760717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 42215334 - 42215275
Alignment:
Q  191 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagt 251  Q
    |||||||||||  ||||||||| |  |||||||||||||||||| |||||| |||||||||    
T  42215334 taagctgaaaacagcttatgaacaa-gtcataagctgttttcattagttctcccaaacagt 42215275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 8e-38; HSPs: 79)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 129 - 288
Target Start/End: Complemental strand, 16937974 - 16937814
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||||| |||||||||| ||||| ||| ||||| || ||||||||| |||  |||||||||||| ||||||||||  ||||||||||||    
T  16937974 ttaaattgtttttgtatatgctataagttgtttttatacgctatattggagaacttaggaaaataagctgaaaaaagcttatgaaatttgtcataagctg 16937875  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    |||||||||||||||||||||| ||| ||||||| ||||  ||| ||||||||| ||||||    
T  16937874 ttttcataagttcttccaaacactctcacaaaacttatgctagtagataagctcaaataag 16937814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 129 - 261
Target Start/End: Complemental strand, 16458070 - 16457937
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||||| |||||||||| ||||| || |||||  || |||||||| ||||  ||| |||||||  ||||||||||| ||||||||||||    
T  16458070 ttaaattgtttttgtatatgctataagttgtttttatgagctaaattggagaacttgtgaaaataaactgaaaagagcttatgaaaactgtcataagctg 16457971  T
Q  228 ttttcataagttcttccaaacagtcttacaaaac 261  Q
    |||||||||||||| ||||||||||| |||||||    
T  16457970 ttttcataagttctcccaaacagtctcacaaaac 16457937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 128 - 288
Target Start/End: Original strand, 10639931 - 10640092
Alignment:
Q  128 attaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagct 226  Q
    |||||||||||||||||| ||  || ||| ||||  |||| |||| || |||||||||||||  ||||||  |||| ||||||||||| |||||||||||    
T  10639931 attaaattgtttttgtatatgtgatgagttgtttacataaactattttggagaacttatgaaaataagctagaaaaagcttatgaaaaatgtcataagct 10640030  T
Q  227 gttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||||||||||||| ||||||| | | ||||||| ||||||||| ||||| ||| ||||||    
T  10640031 gttttcataagttctcccaaacaatatcacaaaacttatgtcagtagataaactcaaataag 10640092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 130 - 288
Target Start/End: Original strand, 40426745 - 40426904
Alignment:
Q  130 taaattgtttttgtatttgctataagtggtttta-taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgt 228  Q
    ||||||||||||||||||||| ||||  ||||   |||||| |||| ||||||||| |||  |||||| ||||| ||||||||||| || ||||||||||    
T  40426745 taaattgtttttgtatttgctgtaagctgtttccgtaagctgtcttggagaacttacgaaaataagcttaaaaaagcttatgaaaaatggcataagctgt 40426844  T
Q  229 tttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    |||||||||  |  ||||||||||| ||||||  ||||||| | ||||||||| ||||||    
T  40426845 tttcataagcacccccaaacagtctcacaaaatttatgtcattagataagctcaaataag 40426904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 129 - 261
Target Start/End: Original strand, 29925820 - 29925953
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||| ||||| |||||||||| ||||  ||||||||| || |||||||||||||  |||| |||||||  |  ||||| | ||||||||||||    
T  29925820 ttaaattgtttctgtatgtgctataagttgtttacataagctatattggagaacttatgaaaataagttgaaaaaaacacatgaacattgtcataagctg 29925919  T
Q  228 ttttcataagttcttccaaacagtcttacaaaac 261  Q
    |||||||||||||| |||||| |||| |||||||    
T  29925920 ttttcataagttctcccaaacggtctcacaaaac 29925953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 175 - 251
Target Start/End: Complemental strand, 3735202 - 3735126
Alignment:
Q  175 agagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagt 251  Q
    ||||||||||||||  |||||||||||| |||| |||||| ||||||||||||||||||| |||||| |||||||||    
T  3735202 agagaacttatgaagataagctgaaaaaagcttttgaaaattgtcataagctgttttcatcagttctaccaaacagt 3735126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 159 - 287
Target Start/End: Complemental strand, 12857765 - 12857637
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaa 258  Q
    ||||||||||||| || |||||||||||||  |||||||||||| | || |||||| ||||||||| |||||||||||||||| |  |||||| | ||||    
T  12857765 ttttataagctatattggagaacttatgaaaataagctgaaaaaaggttgtgaaaattgtcataagttgttttcataagttctccggaacagtttcacaa 12857666  T
Q  259 aacatatgtcagtggataagctctaataa 287  Q
    ||| || |||| | ||| ||||| |||||    
T  12857665 aacttacgtcaatagatgagctcaaataa 12857637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 132 - 261
Target Start/End: Original strand, 32009674 - 32009805
Alignment:
Q  132 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggctt-atgaaaagtgtcataagctgtt 229  Q
    ||||||| |||||| |||||||| | ||||| ||||||||| || |||||||||||||   ||| | ||||| |||| ||||||| ||||| ||||||||    
T  32009674 aattgttcttgtatatgctataaattgtttttataagctatattggagaacttatgaaaacaagttcaaaaaagctttatgaaaattgtcacaagctgtt 32009773  T
Q  230 ttcataagttcttccaaacagtcttacaaaac 261  Q
    |||||||||| ||||||| ||||| |||||||    
T  32009774 ttcataagtttttccaaatagtctcacaaaac 32009805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 129 - 247
Target Start/End: Original strand, 39105443 - 39105562
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    |||||||||||| ||||  |||||||   ||||| |||||||||||| |||||||||||||  |||||| ||||  ||||||||| | ||||||||||||    
T  39105443 ttaaattgttttcgtataagctataatctgttttcataagctatcttggagaacttatgaaaataagctaaaaatagcttatgaacaatgtcataagctg 39105542  T
Q  228 ttttcataagttcttccaaa 247  Q
    ||||||||| |||| |||||    
T  39105543 ttttcataaattctcccaaa 39105562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 191 - 288
Target Start/End: Original strand, 6521119 - 6521217
Alignment:
Q  191 taagctgaaaaaggcttatgaaaagtgtcataag-ctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||| |||||| |||| |||||| ||||||||| | ||||||||||||||| ||||||| ||| ||||||||||||||||| | | ||||||||||||    
T  6521119 taagccgaaaaaagcttgtgaaaattgtcataagtccgttttcataagttctcccaaacaatctcacaaaacatatgtcagtagttcagctctaataag 6521217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 162 - 271
Target Start/End: Complemental strand, 42500298 - 42500191
Alignment:
Q  162 tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaac 261  Q
    |||||||||| || |||||||||||||  |||| |||||||| |||||||||| |||| |||| ||||| ||||||||| |||||| ||||| |||||||    
T  42500298 tataagctatattggagaacttatgaaaataagttgaaaaag-cttatgaaaattgtcgtaagttgtttccataagttc-tccaaagagtctcacaaaac 42500201  T
Q  262 atatgtcagt 271  Q
     |||||||||    
T  42500200 ttatgtcagt 42500191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 159 - 287
Target Start/End: Complemental strand, 12857398 - 12857270
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaa 258  Q
    ||||||||||||| || |||||||||  ||  |||||||||||| |||| |||||| ||||||||| |||||||||||||||| |  || ||| | ||||    
T  12857398 ttttataagctatattggagaacttacaaaaataagctgaaaaaagcttgtgaaaattgtcataagttgttttcataagttctccggaaaagtttcacaa 12857299  T
Q  259 aacatatgtcagtggataagctctaataa 287  Q
    ||| || |||| | ||||||||| |||||    
T  12857298 aacttacgtcaatagataagctcaaataa 12857270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 288
Target Start/End: Original strand, 43300865 - 43301017
Alignment:
Q  137 tttttgtatttgctataagtggtttta-taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcata 235  Q
    ||||||||| | |||||||| |||||  ||||||||||| |||||||||||||  |||||||||| | ||||||  ||| ||||||| |||||||| |||    
T  43300865 tttttgtatatcctataagttgtttttgtaagctatcttggagaacttatgaaaataagctgaaacatgcttatataaaatgtcataggctgtttttata 43300964  T
Q  236 agttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    | |||| || |||||||| | ||||| |||| || |  |||||||| ||||||    
T  43300965 acttctccccaacagtctcataaaacttatgccattatataagctcaaataag 43301017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 133 - 251
Target Start/End: Original strand, 25461074 - 25461193
Alignment:
Q  133 attgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgtttt 231  Q
    ||||||||||||| || ||||||| ||||| ||||||| | || ||||||| |||||  |||||||||||| | ||||||||| || ||||||||| ||     
T  25461074 attgtttttgtatatgttataagttgttttcataagctctattggagaactgatgaaaataagctgaaaaacgtttatgaaaattgccataagctgattc 25461173  T
Q  232 cataagttcttccaaacagt 251  Q
    || ||||||| |||||||||    
T  25461174 caaaagttctaccaaacagt 25461193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 129 - 253
Target Start/End: Original strand, 2568636 - 2568761
Alignment:
Q  129 ttaaattgttttt-gtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagct 226  Q
    ||||||||||||| ||||  ||||||||| ||||| |||||||||| | |||| || |||||  |||||| ||||   |||||||| | |||||||||||    
T  2568636 ttaaattgtttttcgtataagctataagttgttttcataagctatcatggagagctaatgaaaataagctaaaaataacttatgaata-tgtcataagct 2568734  T
Q  227 gttttcataagttcttccaaacagtct 253  Q
    ||||||||||||||||| |||||||||    
T  2568735 gttttcataagttcttctaaacagtct 2568761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 148 - 253
Target Start/End: Complemental strand, 1465091 - 1464986
Alignment:
Q  148 gctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaa 247  Q
    |||||||||  |||||||||||||||| ||| |||| ||||  |||||||||||   |||||||  | || ||||||||||||||||||||||| || ||    
T  1465091 gctataagttattttataagctatcttggaggacttgtgaaaataagctgaaaacaacttatgagcaatgccataagctgttttcataagttctcccgaa 1464992  T
Q  248 cagtct 253  Q
    ||||||    
T  1464991 cagtct 1464986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 159 - 288
Target Start/End: Original strand, 9107100 - 9107229
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaa 258  Q
    |||| |||| ||| || |||||||||||||  | ||| |||||| | || |||||| |||| |||||||||||||| |||||| ||||||| ||| ||||    
T  9107100 ttttgtaagttatattggagaacttatgaaaattagcagaaaaaagtttgtgaaaattgtcctaagctgttttcatgagttctcccaaacattctcacaa 9107199  T
Q  259 aacatatgtcagtggataagctctaataag 288  Q
    ||| ||||||| | ||||| ||| ||||||    
T  9107200 aacttatgtcactagataaactcaaataag 9107229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 288
Target Start/End: Complemental strand, 9202804 - 9202679
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaaca 262  Q
    ||||| ||||||  ||||||||||||  ||||||| |||  ||||||||| | ||||||||||||||| ||| |||| | | ||| |||||||||||||     
T  9202804 ataagttatcttgaagaacttatgaaaataagctggaaacagcttatgaacaatgtcataagctgtttccattagttttccgaaatagtcttacaaaact 9202705  T
Q  263 tatgtcagtggataagctctaataag 288  Q
    |||| |||  ||||||||| ||||||    
T  9202704 tatgccaggagataagctcaaataag 9202679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 163 - 287
Target Start/End: Original strand, 15246847 - 15246971
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaaca 262  Q
    |||||||||||||||||| | || ||  |||| || ||||  ||||||||   ||||||||| || ||||||||||||| ||||||| ||| | |||||     
T  15246847 ataagctatcttagagaaatgataaaaataagttgcaaaaaacttatgaatgatgtcataagttgctttcataagttctcccaaacattctaataaaact 15246946  T
Q  263 tatgtcagtggataagctctaataa 287  Q
    ||||||||| ||||||||| |||||    
T  15246947 tatgtcagtagataagctcaaataa 15246971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 176 - 260
Target Start/End: Complemental strand, 32859762 - 32859679
Alignment:
Q  176 gagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaa 260  Q
    ||||| |||||||  ||||||||||||| |||||||||| |||| |||| ||||||||||| |||||||||||||| | ||||||    
T  32859762 gagaagttatgaaaataagctgaaaaag-cttatgaaaaatgtcgtaagttgttttcataaattcttccaaacagtgtcacaaaa 32859679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 176 - 260
Target Start/End: Complemental strand, 32861934 - 32861851
Alignment:
Q  176 gagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaa 260  Q
    ||||| |||||||  ||||||||||||| |||||||||| |||| |||| ||||||||||| |||||||||||||| | ||||||    
T  32861934 gagaagttatgaaaataagctgaaaaag-cttatgaaaaatgtcgtaagttgttttcataaattcttccaaacagtgtcacaaaa 32861851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 32942650 - 32942726
Alignment:
Q  205 cttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctc 281  Q
    |||||||||| ||||||||||||| ||||||| |||| ||||||||||  ||||||| ||||||||| || ||||||    
T  32942650 cttatgaaaaatgtcataagctgtattcataaattctcccaaacagtcaaacaaaacttatgtcagtagaaaagctc 32942726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 164 - 288
Target Start/End: Complemental strand, 35445898 - 35445775
Alignment:
Q  164 taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacat 263  Q
    ||||||||||| ||||| |||||||  |||| |||||| | || ||||| | ||| ||||||||||||||||| ||||  |||| ||||| ||||||| |    
T  35445898 taagctatcttggagaatttatgaaaataaggtgaaaatgcctaatgaaca-tgttataagctgttttcataaattctgtcaaagagtctcacaaaactt 35445800  T
Q  264 atgtcagtggataagctctaataag 288  Q
    |||||||| ||||| ||| ||||||    
T  35445799 atgtcagtagataaactcaaataag 35445775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 288
Target Start/End: Original strand, 11700163 - 11700301
Alignment:
Q  150 tataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaac 248  Q
    ||||||| ||||| ||| |||||| | |||||||||||||  |||| ||||| |   ||||||| | ||||||||| ||||| ||||||||||   ||||    
T  11700163 tataagttgttttgatatgctatcgtggagaacttatgaaaataagatgaaacaat-ttatgaacaatgtcataagttgtttccataagttctgtgaaac 11700261  T
Q  249 agtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||| ||||||| |||| |||||||||||||| ||||||    
T  11700262 agtctcacaaaacttatgccagtggataagctcaaataag 11700301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 19820329 - 19820376
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggaca 540  Q
    ||||||||||||||||||||||||||||| |||||| |||||||||||    
T  19820329 tatgaagcacggacactcctctgattaggcgtgtcccggtgtcggaca 19820376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 163 - 277
Target Start/End: Original strand, 7984983 - 7985097
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaaca 262  Q
    |||||||||||| ||||| |||||||  |||||||||||  ||||||||| |  |||| ||||||||||| |||| ||| ||||| ||||| ||||| |     
T  7984983 ataagctatcttggagaatttatgaaaataagctgaaaacagcttatgaacaacgtcacaagctgttttcttaagctctcccaaatagtctcacaaagct 7985082  T
Q  263 tatgtcagtggataa 277  Q
    |||| |||| |||||    
T  7985083 tatgccagtagataa 7985097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 159 - 253
Target Start/End: Original strand, 37954696 - 37954790
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtct 253  Q
    ||||||||||||| || |||||| ||||||  |||| ||||||| ||| ||||||| | |||||||||||||||||||  ||| || ||||||||    
T  37954696 ttttataagctatattggagaacatatgaaaataagttgaaaaaagctaatgaaaattttcataagctgttttcataaactctcccgaacagtct 37954790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 163 - 288
Target Start/End: Original strand, 7674662 - 7674786
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaaca 262  Q
    |||||||||||| ||||| || ||||  |||||||||||   ||||| || | ||||||||| ||||| ||||||||||||||| |||||| |||||||     
T  7674662 ataagctatcttggagaatttgtgaaaataagctgaaaacaccttataaaca-tgtcataagttgtttccataagttcttccaagcagtctcacaaaact 7674760  T
Q  263 tatgtcagtggataagctctaataag 288  Q
    || ||  || ||||||||| ||||||    
T  7674761 taagtaggtagataagctcaaataag 7674786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 163 - 288
Target Start/End: Complemental strand, 7706054 - 7705929
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaaca 262  Q
    ||||||||| || |||||||| ||||  ||||| |||||| ||   |||||| |||||||||||||||||||||||||| ||||| ||  | |||||||     
T  7706054 ataagctatattggagaacttgtgaaaataagccgaaaaaagcaggtgaaaactgtcataagctgttttcataagttctcccaaagagcgtcacaaaact 7705955  T
Q  263 tatgtcagtggataagctctaataag 288  Q
    ||||  ||| |||| |||| ||||||    
T  7705954 tatgctagtagatatgctcaaataag 7705929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 132 - 251
Target Start/End: Complemental strand, 6587195 - 6587076
Alignment:
Q  132 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttt 230  Q
    ||||||||| ||||  ||||||||| ||||| |||||||||  | |||||||| ||||  ||||||| |||  |||||||||   |||||||||||||||    
T  6587195 aattgttttcgtataagctataagttgttttcataagctatagtggagaacttgtgaaaataagctgtaaacagcttatgaacc-tgtcataagctgttt 6587097  T
Q  231 tcataagttcttccaaacagt 251  Q
    |  ||||||||||||||||||    
T  6587096 ttttaagttcttccaaacagt 6587076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 288
Target Start/End: Original strand, 15015922 - 15015982
Alignment:
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    |||||||||||||| ||||||||||| ||||| | ||||||||| ||||||||| ||||||    
T  15015922 ttttcataagttctcccaaacagtctcacaaagcttatgtcagtagataagctcaaataag 15015982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 30098455 - 30098407
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||| ||||| ||||||||||||||||||||| |||||    
T  30098455 tatgaagcacggacattcctcggattaggtgtgtcctggtgtctgacac 30098407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 176 - 260
Target Start/End: Complemental strand, 32862718 - 32862635
Alignment:
Q  176 gagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaa 260  Q
    ||||| |||||||  ||||||| ||||| |||||||||| |||| |||| ||||||||||| |||||||||||||| | ||||||    
T  32862718 gagaagttatgaaaataagctggaaaag-cttatgaaaaatgtcgtaagttgttttcataaattcttccaaacagtgtcacaaaa 32862635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 129 - 288
Target Start/End: Original strand, 12425550 - 12425712
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    |||||||||||| ||||  ||||||||  ||||| | |||||||||| |||||||||||||  |||| ||||||   |||||  | | |||  || | ||    
T  12425550 ttaaattgttttcgtataagctataagctgttttcacaagctatcttggagaacttatgaaaataagttgaaaacaacttattgacaatgttttaggttg 12425649  T
Q  228 ttttcata--agttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||||||  |||||| ||||||||||| ||||||| |||| |||| ||||||||| ||||||    
T  12425650 ttttcatataagttctcccaaacagtctcacaaaacttatgacagtagataagctcaaataag 12425712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 38464314 - 38464361
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggaca 540  Q
    |||||||||| |||||||||| |||||||||||||| |||||||||||    
T  38464314 tatgaagcacagacactcctcggattaggtgtgtcccggtgtcggaca 38464361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 279
Target Start/End: Complemental strand, 4014480 - 4014362
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtg-tcataagctgtttt-cataagttcttccaaacagtcttacaaaa 260  Q
    |||||||||||| |||||||||||||  |||||||||||  ||||||||| ||||   |||| |||||||  | ||||||||||||||||| | ||||||    
T  4014480 ataagctatcttggagaacttatgaaaataagctgaaaacagcttatgaacagtgaaaataacctgttttaaacaagttcttccaaacagtgtcacaaaa 4014381  T
Q  261 catatgtcagtggataagc 279  Q
      |||| |||| |||||||    
T  4014380 tttatgccagtagataagc 4014362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 204 - 253
Target Start/End: Original strand, 3520632 - 3520681
Alignment:
Q  204 gcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtct 253  Q
    |||||||||||  |||||||| |||||||||||||||| |||||||||||    
T  3520632 gcttatgaaaaaagtcataagatgttttcataagttctcccaaacagtct 3520681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 163 - 276
Target Start/End: Complemental strand, 19460442 - 19460330
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaaca 262  Q
    ||||| ||||||  ||||||||||||  |||||||||| || |||||||||| | ||||||| ||||| || ||||||| | ||||||||| || ||||     
T  19460442 ataagttatcttcaagaacttatgaaaataagctgaaacag-cttatgaaaaatatcataagttgtttccaaaagttctcctaaacagtctcactaaact 19460344  T
Q  263 tatgtcagtggata 276  Q
    |||| |||| ||||    
T  19460343 tatgccagtagata 19460330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 176 - 240
Target Start/End: Complemental strand, 34669773 - 34669708
Alignment:
Q  176 gagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagct-gttttcataagttc 240  Q
    |||||||| |||| ||||||||||||| ||||||||||| |||||| || | ||||||||||||||    
T  34669773 gagaacttctgaaattaagctgaaaaaagcttatgaaaaatgtcattagttagttttcataagttc 34669708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 176 - 241
Target Start/End: Original strand, 35446082 - 35446147
Alignment:
Q  176 gagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttct 241  Q
    |||||||||||||  |||||||||||| ||||| ||||| |||||||| ||||||||  |||||||    
T  35446082 gagaacttatgaaaataagctgaaaaaagcttacgaaaaatgtcataaactgttttcgaaagttct 35446147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 217 - 266
Target Start/End: Original strand, 39248166 - 39248215
Alignment:
Q  217 gtcataagctgttttcataagttcttccaaacagtcttacaaaacatatg 266  Q
    ||||||||||||||| ||||||||| ||||||||||| ||||||| ||||    
T  39248166 gtcataagctgtttttataagttctcccaaacagtctcacaaaacttatg 39248215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 495 - 544
Target Start/End: Original strand, 39268541 - 39268590
Alignment:
Q  495 tgaagcacggacactcctctgattaggtgtgtcctggtgtcggacacatg 544  Q
    ||||||||||||||||||| ||||||| ||||||  ||||||||||||||    
T  39268541 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacatg 39268590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 223 - 288
Target Start/End: Original strand, 39594881 - 39594946
Alignment:
Q  223 agctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||||||||||||||| | ||||||| ||| ||||||| |||||| || ||||||||| ||||||    
T  39594881 agctgttttcataagttgtcccaaacaatctaacaaaacttatgtcggtagataagctcaaataag 39594946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 195 - 288
Target Start/End: Original strand, 41419365 - 41419458
Alignment:
Q  195 ctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    |||||||  ||| ||||| | |||||||||||||||||| ||||| | ||||||| ||| ||||||  ||||||||| ||| ||||| ||||||    
T  41419365 ctgaaaatagctcatgaacaatgtcataagctgttttcacaagttatcccaaacaatctcacaaaatttatgtcagtagattagctcaaataag 41419458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 2419985 - 2419937
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    |||||||||||||||||| || |||||||||||||| || |||||||||    
T  2419985 tatgaagcacggacactcatcggattaggtgtgtcccggggtcggacac 2419937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 2437029 - 2436981
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||| ||||||||| ||||||| ||||| |||||||||||||    
T  2437029 tatgaagcacgaacactcctcggattaggcgtgtcttggtgtcggacac 2436981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 14873640 - 14873592
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| ||||||| |||||| ||||| ||||||    
T  14873640 tatgaagcacggacactcctcggattaggcgtgtcccggtgttggacac 14873592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 32766873 - 32766921
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| ||||||  || ||||||||||||||||    
T  32766873 tatgaagcacggacactcctcagattagacgtatcctggtgtcggacac 32766921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 288
Target Start/End: Original strand, 32941545 - 32941609
Alignment:
Q  225 ctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggat-aagctctaataag 288  Q
    ||||||||||||||||| |||||| |||| ||| ||| ||||||||| ||| |||||||||||||    
T  32941545 ctgttttcataagttctcccaaacggtctcacagaacttatgtcagtagataaagctctaataag 32941609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 167 - 243
Target Start/End: Original strand, 42646685 - 42646761
Alignment:
Q  167 gctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttc 243  Q
    |||||||| ||||||||||| |  ||| || ||||| ||||||||||| |||| ||| || ||||||||||||||||    
T  42646685 gctatcttcgagaacttatggaaataaactaaaaaaagcttatgaaaaatgtcctaaacttttttcataagttcttc 42646761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 42893478 - 42893430
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||| |||||||||||  |||||| |||||||||||||||||||    
T  42893478 tatgaagcatggacactcctcatattaggcgtgtcctggtgtcggacac 42893430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 246
Target Start/End: Original strand, 706505 - 706560
Alignment:
Q  191 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaa 246  Q
    |||||||||||  ||||||||| | |||||||| || |||||||||||||||||||    
T  706505 taagctgaaaatagcttatgaacaatgtcataaactattttcataagttcttccaa 706560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 241
Target Start/End: Complemental strand, 2973557 - 2973522
Alignment:
Q  206 ttatgaaaagtgtcataagctgttttcataagttct 241  Q
    ||||||||| ||||||||||||||||||||||||||    
T  2973557 ttatgaaaattgtcataagctgttttcataagttct 2973522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 266
Target Start/End: Original strand, 7808547 - 7808622
Alignment:
Q  191 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatg 266  Q
    |||||||||||  ||||||||| | ||| ||||||| |||||||||| ||| ||||||||||| | | ||||||||    
T  7808547 taagctgaaaacagcttatgaacaatgttataagctattttcataagctctcccaaacagtctcaaataacatatg 7808622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 500 - 547
Target Start/End: Complemental strand, 17088402 - 17088355
Alignment:
Q  500 cacggacactcctctgattaggtgtgtcctggtgtcggacacatgacc 547  Q
    |||||||||||||| ||||||| |||||| |||||||||||| |||||    
T  17088402 cacggacactcctcggattaggcgtgtcccggtgtcggacacgtgacc 17088355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 19552477 - 19552524
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggaca 540  Q
    |||||| |||||||||||||| ||||||||||||||  ||||||||||    
T  19552477 tatgaaacacggacactcctcggattaggtgtgtccaagtgtcggaca 19552524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 541
Target Start/End: Original strand, 21190998 - 21191045
Alignment:
Q  494 atgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    |||||||||||||||||||| ||||||| |||||| || |||||||||    
T  21190998 atgaagcacggacactcctcggattaggcgtgtcccggagtcggacac 21191045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 281
Target Start/End: Original strand, 31038333 - 31038416
Alignment:
Q  198 aaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctc 281  Q
    ||||| ||||||||||| ||||||||||| |||| ||||||| | | ||||||| | ||||||| |||| | || |||||||||    
T  31038333 aaaaaagcttatgaaaaatgtcataagctatttttataagttgtccaaaacagtatcacaaaacttatgccggtagataagctc 31038416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 281
Target Start/End: Original strand, 31047557 - 31047640
Alignment:
Q  198 aaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctc 281  Q
    ||||| ||||||||||| ||||||||||| |||| ||||||| | | ||||||| | ||||||| |||| | || |||||||||    
T  31047557 aaaaaagcttatgaaaaatgtcataagctatttttataagttgtccaaaacagtatcacaaaacttatgccggtagataagctc 31047640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 544
Target Start/End: Complemental strand, 39698670 - 39698619
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacacatg 544  Q
    ||||||||||||||||||||| ||||||| |||||  ||||||||| |||||    
T  39698670 tatgaagcacggacactcctcggattaggcgtgtctcggtgtcggatacatg 39698619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 288
Target Start/End: Original strand, 41534506 - 41534577
Alignment:
Q  217 gtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||||||||||||||| ||||| | ||||||| ||| ||||||  ||||||||| ||| ||||| ||||||    
T  41534506 gtcataagctgttttcacaagttatcccaaacaatctcacaaaatttatgtcagtagattagctcaaataag 41534577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 544
Target Start/End: Complemental strand, 43564999 - 43564948
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacacatg 544  Q
    ||||||||||||||||| ||| ||||||| |||||| || ||||||||||||    
T  43564999 tatgaagcacggacacttctcggattaggcgtgtcccggcgtcggacacatg 43564948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 499735 - 499701
Alignment:
Q  216 tgtcataagctgttttcataagttcttccaaacag 250  Q
    |||||||||||||||||||||||||| ||||||||    
T  499735 tgtcataagctgttttcataagttctcccaaacag 499701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 6096602 - 6096676
Alignment:
Q  204 gcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataag 278  Q
    ||||||||| | ||||| ||||||||| | ||||||||||| || ||||| ||||||| |||| |||| ||||||    
T  6096602 gcttatgaacaatgtcacaagctgtttacgtaagttcttcctaaaagtctcacaaaacttatgccagtagataag 6096676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 164 - 254
Target Start/End: Complemental strand, 29845489 - 29845401
Alignment:
Q  164 taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtctt 254  Q
    ||||||||||| ||||| |||||||| |||||||||||  ||||||  || || ||||||||| |||||||||||||| ||| | ||||||    
T  29845489 taagctatcttggagaagttatgaatataagctgaaaacagcttat-taacgtatcataagct-ttttcataagttctcccagagagtctt 29845401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 159 - 233
Target Start/End: Original strand, 39477893 - 39477967
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttca 233  Q
    ||||||||||||| ||||||||||| ||||  ||||| ||||||  ||| |||||| |||||| |||||| ||||    
T  39477893 ttttataagctatgttagagaacttctgaaaataagcagaaaaaaacttttgaaaattgtcatcagctgtgttca 39477967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 254
Target Start/End: Original strand, 42646957 - 42646995
Alignment:
Q  216 tgtcataagctgttttcataagttcttccaaacagtctt 254  Q
    ||||||||||| |||||||||||||||||||| ||||||    
T  42646957 tgtcataagctattttcataagttcttccaaatagtctt 42646995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 267
Target Start/End: Complemental strand, 13697828 - 13697711
Alignment:
Q  150 tataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaaca 249  Q
    ||||||| |||||||||||||| || ||||| |||||||  |||| |||||||  |||||||||| || |  ||  ||||| ||| | ||||| ||||||    
T  13697828 tataagttgttttataagctatgttggagaagttatgaaaataagttgaaaaaaacttatgaaaactgccgcaaattgtttacatgatttctttcaaaca 13697729  T
Q  250 gtcttacaaaacatatgt 267  Q
     |||| |||||| |||||    
T  13697728 atctttcaaaacttatgt 13697711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 241
Target Start/End: Original strand, 17368675 - 17368767
Alignment:
Q  149 ctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttct 241  Q
    |||||||| ||||| |||||||||||| ||||  ||||| |  |||||||||||  || |||||| | ||||||||| ||||||||||||||||    
T  17368675 ctataagttgttttcataagctatcttggagaggttatggaaataagctgaaaactgcatatgaaca-tgtcataagttgttttcataagttct 17368767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 261
Target Start/End: Complemental strand, 17560214 - 17560173
Alignment:
Q  220 ataagctgttttcataagttcttccaaacagtcttacaaaac 261  Q
    |||||||||||||||||| ||||||||||||| | |||||||    
T  17560214 ataagctgttttcataagctcttccaaacagtgtcacaaaac 17560173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 209 - 278
Target Start/End: Original strand, 32372672 - 32372741
Alignment:
Q  209 tgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataag 278  Q
    |||||| ||| || || |||||| | ||||||||||||||||||| ||||||| |||| |||| ||||||    
T  32372672 tgaaaaatgtaattagttgttttaaaaagttcttccaaacagtctcacaaaacttatgccagtagataag 32372741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 224 - 261
Target Start/End: Complemental strand, 41981698 - 41981661
Alignment:
Q  224 gctgttttcataagttcttccaaacagtcttacaaaac 261  Q
    |||||||||||||||||| ||||||||||| |||||||    
T  41981698 gctgttttcataagttctcccaaacagtctcacaaaac 41981661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 238
Target Start/End: Complemental strand, 3280771 - 3280696
Alignment:
Q  163 ataagctatcttagagaactt-atgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagt 238  Q
    |||||||||||| |||||||| |||||  ||| || ||||  ||||||||| | |||||||||||||||||||||||    
T  3280771 ataagctatctttgagaactttatgaaaataaactaaaaagagcttatgaaga-tgtcataagctgttttcataagt 3280696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 21576686 - 21576734
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| ||||||| ||||||  ||||| |||||    
T  21576686 tatgaagcacggacactcctcggattaggcgtgtcccagtgtcagacac 21576734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 24030176 - 24030144
Alignment:
Q  219 cataagctgttttcataagttcttccaaacagt 251  Q
    ||||||||||||||||||||||| |||||||||    
T  24030176 cataagctgttttcataagttctcccaaacagt 24030144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 505 - 541
Target Start/End: Complemental strand, 26312875 - 26312839
Alignment:
Q  505 acactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  26312875 acactcctcggattaggtgtgtcctggtgtcagacac 26312839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 246
Target Start/End: Original strand, 32022116 - 32022168
Alignment:
Q  194 gctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaa 246  Q
    ||||||||| |||| |||||| |||| |||| ||||||| |||||||||||||    
T  32022116 gctgaaaaaagcttgtgaaaattgtcttaagatgttttcgtaagttcttccaa 32022168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 35017161 - 35017113
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| ||||||| |||||| | ||| ||||||    
T  35017161 tatgaagcacggacactcctcggattaggcgtgtcccgatgttggacac 35017113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 494 - 534
Target Start/End: Complemental strand, 43001922 - 43001882
Alignment:
Q  494 atgaagcacggacactcctctgattaggtgtgtcctggtgt 534  Q
    |||||||||||||||||||| ||||||| |||||| |||||    
T  43001922 atgaagcacggacactcctcggattaggcgtgtccaggtgt 43001882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 80; Significance: 3e-37; HSPs: 83)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 137 - 287
Target Start/End: Complemental strand, 18405914 - 18405763
Alignment:
Q  137 tttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcata 235  Q
    ||||||||| |||||||||| ||||| |||||||||||| ||||||||||||| |||||||  |||| | |||||||||||||| | | |||||||||||    
T  18405914 tttttgtatatgctataagttgttttcataagctatcttggagaacttatgaaattaagcttgaaaaagattatgaaaagtgtcgtgaactgttttcata 18405815  T
Q  236 agttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataa 287  Q
    ||||||| |||||||||| ||||||| ||||||||| ||||||||| |||||    
T  18405814 agttcttgcaaacagtctcacaaaacttatgtcagtagataagctcaaataa 18405763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 129 - 281
Target Start/End: Original strand, 30443872 - 30444025
Alignment:
Q  129 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    |||||||| |||||||| ||||||||| || |||||||| |||| || |||||||||||||  |||||||||||| |||| |||||| ||||||||||||    
T  30443872 ttaaattgcttttgtatatgctataagctgtttttataaactatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaattgtcataagctg 30443971  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctc 281  Q
    |||||||||| ||| ||||||||||| || |||  |||| |||| |||||||||    
T  30443972 ttttcataagctctaccaaacagtctcaccaaatttatgccagtagataagctc 30444025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 128 - 276
Target Start/End: Complemental strand, 53789553 - 53789406
Alignment:
Q  128 attaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagct 226  Q
    |||||| |||||| |||| |||||||||| ||| | |||||||||| | ||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  53789553 attaaaatgttttggtatatgctataagttgttatcataagctatcatggagaacttatgaaattaagctgaaaaaagcttatgaaaagtgtcataagct 53789454  T
Q  227 gttttcataagttcttccaaacagtcttacaaaacatatgtcagtggata 276  Q
    |||| || |||||||  |||  ||||| ||||||| ||||||||| ||||    
T  53789453 gtttccaaaagttctctcaa--agtctcacaaaacttatgtcagtagata 53789406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 129 - 288
Target Start/End: Original strand, 20880455 - 20880615
Alignment:
Q  129 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||||| ||||||||  || ||||| ||||||| || |||||||||||||  |||||| ||||| ||||||||||| ||||||||||||    
T  20880455 ttaaattgtttttgtatatgctataaactgtttttaaaagctatattggagaacttatgaaaataagctcaaaaaagcttatgaaaattgtcataagctg 20880554  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    |||||||| ||||| ||||| ||||| |  |||| ||||  ||| ||||||||| ||||||    
T  20880555 ttttcataggttctcccaaatagtctaaggaaacttatgcaagtagataagctcaaataag 20880615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 129 - 286
Target Start/End: Complemental strand, 402633 - 402475
Alignment:
Q  129 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    |||||||||||| ||||  | |||||| || |||||||| |||||||  ||||||| |||| ||||||||||||  ||||||||| | ||||||||||||    
T  402633 ttaaattgttttcgtataagttataagctgtttttataatctatcttgaagaacttgtgaaattaagctgaaaacagcttatgaacaatgtcataagctg 402534  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaata 286  Q
    |||||||| ||||| |||||||||||| |||||| ||||| ||| ||||| ||| ||||    
T  402533 ttttcatacgttctcccaaacagtcttgcaaaacttatgttagttgataaactcaaata 402475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 129 - 281
Target Start/End: Original strand, 39980708 - 39980861
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    |||||||||||||| |  |||||||||| ||||| ||||||||| || |||||||||||||  |||| ||||||| ||||||||||   |||||||||||    
T  39980708 ttaaattgtttttgaacatgctataagttgtttttataagctatattggagaacttatgaaaataagttgaaaaaagcttatgaaaccagtcataagctg 39980807  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctc 281  Q
    ||||||||||||||   ||||||||| ||||||| ||||  ||| |||||||||    
T  39980808 ttttcataagttctcttaaacagtctcacaaaacttatgctagtagataagctc 39980861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 129 - 266
Target Start/End: Original strand, 21367646 - 21367784
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    |||||||||||| ||||    ||||||| ||||| |||||||||||| |||||||||||||  |||||||||||  |||| |||| | ||||||||||||    
T  21367646 ttaaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaaaataagctgaaaacagcttgtgaacaatgtcataagctg 21367745  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatg 266  Q
    |||||||||||||| ||||||||||  ||||||| ||||    
T  21367746 ttttcataagttctcccaaacagtcccacaaaacttatg 21367784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 163 - 288
Target Start/End: Complemental strand, 34610862 - 34610737
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaaca 262  Q
    |||||||||||| | |||||||||||  | |||||||||   |||||||| | |||||||||| ||||||||||||||| ||||| |||  ||||||||     
T  34610862 ataagctatcttggcgaacttatgaaaatcagctgaaaaccacttatgaacaatgtcataagcagttttcataagttctcccaaatagttgtacaaaact 34610763  T
Q  263 tatgtcagtggataagctctaataag 288  Q
    ||||||||| ||||||||| ||||||    
T  34610762 tatgtcagtagataagctcaaataag 34610737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 196 - 288
Target Start/End: Complemental strand, 31365211 - 31365119
Alignment:
Q  196 tgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||||| ||||||||||| |||||||||||| ||||||||||||| ||||||||||| ||||||| |||| || | ||||||||| ||||||    
T  31365211 tgaaaaaagcttatgaaaattgtcataagctgctttcataagttctcccaaacagtctcacaaaacttatgccaatagataagctcaaataag 31365119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 288
Target Start/End: Complemental strand, 24085398 - 24085269
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaa 258  Q
    |||| ||||||||||| |||||||| ||||  |||||||||||  || |||||| |||  ||||||||||||||||||||||| | || |||||| ||||    
T  24085398 ttttgtaagctatcttggagaacttgtgaaaataagctgaaaacagcgtatgaacagtaccataagctgttttcataagttctccaaaccagtctcacaa 24085299  T
Q  259 aacatatgtcagtggataagctctaataag 288  Q
    ||| |||| | || ||||||||| ||||||    
T  24085298 aacttatgccggtagataagctcaaataag 24085269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 129 - 288
Target Start/End: Original strand, 584025 - 584185
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtg-gttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    |||||||||||||||   ||||||||||  |||| ||||||||||||  |||||||||||| ||||||| ||| |  | |||||||| || | |||||||    
T  584025 ttaaattgtttttgttcatgctataagttagtttcataagctatcttgaagaacttatgaaattaagcttaaagaaacctatgaaaactgccgtaagctg 584124  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||||||| |||| | ||||||||| ||| ||| ||||  ||| ||||||||| ||||||    
T  584125 ttttcataaattctccaaaacagtctcacagaacttatgctagtagataagctcaaataag 584185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 129 - 288
Target Start/End: Complemental strand, 13715665 - 13715503
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt---ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagc 225  Q
    |||| ||| |||||||| || ||||||| |||||   |||||| || || || ||||||||||  |||| ||||||| ||||||||||  ||||||||||    
T  13715665 ttaatttgattttgtatatgatataagttgtttttatataagcgatattggacaacttatgaaaataagttgaaaaatgcttatgaaagttgtcataagc 13715566  T
Q  226 tgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||||   ||||||| ||||||||||| ||||||||||||  ||| |||||| || ||||||    
T  13715565 tgttttaggaagttctaccaaacagtctcacaaaacatatgctagtagataagatcaaataag 13715503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 129 - 240
Target Start/End: Complemental strand, 36631142 - 36631030
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||||  |||||||||| ||||| || |||||| || |||||||||||||  ||||| |||||| |||| ||||||  |||||||||||    
T  36631142 ttaaattgtttttgtacatgctataagttgtttttatgagctatattggagaacttatgaaaataagcagaaaaaagcttttgaaaatcgtcataagctg 36631043  T
Q  228 ttttcataagttc 240  Q
     ||||||||||||    
T  36631042 gtttcataagttc 36631030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 163 - 282
Target Start/End: Original strand, 466207 - 466326
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaaca 262  Q
    ||||||||| || |||||||||||||  |||||| ||||| ||||| ||||| ||| | ||||||||||  |||||| | ||||||||||| ||||||      
T  466207 ataagctatgttggagaacttatgaaaataagctaaaaaaagcttaagaaaaatgttaaaagctgtttttgtaagttatcccaaacagtctcacaaaatc 466306  T
Q  263 tatgtcagtggataagctct 282  Q
    ||||||||||| ||||||||    
T  466307 tatgtcagtggttaagctct 466326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 129 - 251
Target Start/End: Original strand, 20170502 - 20170625
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||||| |||||||||| ||||| | ||| ||| || ||||||| |||||  |||| ||||||| ||||||||||| |  ||| |||||    
T  20170502 ttaaattgtttttgtatatgctataagttgtttttacaagttatttttgagaactaatgaaaataagttgaaaaaagcttatgaaaaatcccattagctg 20170601  T
Q  228 ttttcataagttcttccaaacagt 251  Q
    ||||| |||||||| |||||||||    
T  20170602 ttttcttaagttctcccaaacagt 20170625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 163 - 258
Target Start/End: Original strand, 45541585 - 45541679
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaa 258  Q
    |||||||||||| || |||||||||   ||| |||||||  ||||||||| | |||||||||||||||||||||||||||| ||||||||||||||    
T  45541585 ataagctatcttggataacttatgagaataacctgaaaacagcttatgaaca-tgtcataagctgttttcataagttcttctaaacagtcttacaa 45541679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 286
Target Start/End: Original strand, 22203429 - 22203566
Alignment:
Q  149 ctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaa 247  Q
    |||||||| ||||| |||||||||||| |||||||||||||  ||| ||| |  | ||||| | ||| ||||||||||||||||||||||||| ||||||    
T  22203429 ctataagttgttttcataagctatcttggagaacttatgaaaataaactgcattaagcttaagtaaaatgtcataagctgttttcataagttc-tccaaa 22203527  T
Q  248 cagtcttacaaaacatatgtcagtggataagctctaata 286  Q
    |||||| ||||||   ||||| || ||||||||| ||||    
T  22203528 cagtctcacaaaattaatgtcggtagataagctcgaata 22203566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 129 - 260
Target Start/End: Original strand, 20257514 - 20257647
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggttttat-aagctatcttagagaacttatgaatt-taagctgaaaaaggcttatgaaaagtgtcataagct 226  Q
    ||||||||||||||||| |||||||||| ||||| | ||||||| || |||| ||||||||   |||| |  ||||  |||||||||| |||||| ||||    
T  20257514 ttaaattgtttttgtatatgctataagttgttttttgaagctatattggagagcttatgaaaaataagttttaaaaaacttatgaaaattgtcattagct 20257613  T
Q  227 gttttcataagttcttccaaacagtcttacaaaa 260  Q
    | ||||||||||||| ||||||||||| ||||||    
T  20257614 gctttcataagttctcccaaacagtctcacaaaa 20257647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 248
Target Start/End: Complemental strand, 46778281 - 46778162
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||| | ||||||||   ||||| |||| ||||||| || |||||||||| | |||||||| ||  |||||||||| ||||||||| ||    
T  46778281 ttaaattgtttttgtttatgctataaactgttttcataaactatcttggacaacttatgaaat-aagctgaacaaaacttatgaaaaatgtcataagttg 46778183  T
Q  228 ttttcataagttcttccaaac 248  Q
    |||||||||||||| ||||||    
T  46778182 ttttcataagttctcccaaac 46778162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 159 - 250
Target Start/End: Original strand, 901934 - 902025
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacag 250  Q
    ||||||||||||| || |||||||||||||  |||| ||||||| ||||||| ||| ||| || ||||||||||||||||| | ||||||||    
T  901934 ttttataagctatattggagaacttatgaaaataagttgaaaaaagcttatggaaaatgttattagctgttttcataagttttcccaaacag 902025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 177 - 288
Target Start/End: Complemental strand, 9832797 - 9832686
Alignment:
Q  177 agaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggata 276  Q
    ||||||||| ||| |||| ||||||| | |||||||||  | ||||||||||||||| ||||||| ||||||||| | ||||||| ||||||| |  |||    
T  9832797 agaacttataaatataagttgaaaaaagtttatgaaaaaaggcataagctgttttcaaaagttctcccaaacagtttgacaaaacttatgtcaataaata 9832698  T
Q  277 agctctaataag 288  Q
    ||||| ||||||    
T  9832697 agctcaaataag 9832686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 163 - 281
Target Start/End: Complemental strand, 3845618 - 3845501
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaaca 262  Q
    ||||| |||||| |||||||||||||  |||||||||||| | |||| |||| |||||||| |||| |||| | |||||  |||||||||| |||||||     
T  3845618 ataagttatcttggagaacttatgaaaataagctgaaaaaagattat-aaaaatgtcataatctgtcttcagatgttctatcaaacagtctcacaaaact 3845520  T
Q  263 tatgtcagtggataagctc 281  Q
    |||| |||| |||||||||    
T  3845519 tatgccagtagataagctc 3845501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 131 - 288
Target Start/End: Original strand, 37689212 - 37689368
Alignment:
Q  131 aaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgtt 229  Q
    ||||||||||||||| ||||||| || ||||| || || ||| | |||| |||||||||  |||| ||||||| |||| |||||| ||||||||||||||    
T  37689212 aaattgtttttgtatatgctataggttgtttttatgag-tatatcagagcacttatgaaaataagttgaaaaaagctt-tgaaaattgtcataagctgtt 37689309  T
Q  230 ttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||| |||||||| ||| ||||| | ||| ||| ||| |||||  |||||||| ||||||    
T  37689310 ttcttaagttctcccatacagtatcacagaacctatttcagtaaataagctcaaataag 37689368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 191 - 280
Target Start/End: Original strand, 37795637 - 37795726
Alignment:
Q  191 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagct 280  Q
    |||||||||||  ||||| ||| |  ||| |||| |||||| |||||| ||||||||||||||||||| || ||||||||||||||||||    
T  37795637 taagctgaaaatagcttaggaacaacgtcgtaagttgttttaataagtccttccaaacagtcttacaagacttatgtcagtggataagct 37795726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 493 - 544
Target Start/End: Original strand, 34185053 - 34185104
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacacatg 544  Q
    ||||||||||||||||||||| ||||||| |||||| |||||||||||||||    
T  34185053 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacacatg 34185104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 216 - 258
Target Start/End: Original strand, 24624276 - 24624318
Alignment:
Q  216 tgtcataagctgttttcataagttcttccaaacagtcttacaa 258  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  24624276 tgtcataagctgttttcataagctcttccaaacagtcttacaa 24624318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 129 - 260
Target Start/End: Complemental strand, 31365391 - 31365268
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgt 228  Q
    ||||||||||||||||| |||||||||| ||||        || || ||||| |||||||  | || ||||||||  ||||||||| |||||||||||||    
T  31365391 ttaaattgtttttgtatatgctataagttgttt--------atattggagaatttatgaaaatgagttgaaaaagatttatgaaaattgtcataagctgt 31365300  T
Q  229 tttcataagttcttccaaacagtcttacaaaa 260  Q
     |||||||||||| ||||||||| | ||||||    
T  31365299 attcataagttctcccaaacagtgtcacaaaa 31365268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 221
Target Start/End: Complemental strand, 35959547 - 35959454
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggttt-tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcat 221  Q
    ||||||| ||||||||| |||| ||||| |||| |||||||||| |||||||| || ||||  |||||||||||| |||| |||||| ||||||    
T  35959547 ttaaattatttttgtatatgctgtaagttgtttctataagctatattagagaatttttgaaaataagctgaaaaaagcttttgaaaattgtcat 35959454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 163 - 288
Target Start/End: Complemental strand, 39602266 - 39602142
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaaca 262  Q
    |||||||||||| |||||||||||||  |||| ||||||    ||||||| | ||||||||||||| |||||||| ||||||||| || || |||||||     
T  39602266 ataagctatctttgagaacttatgaaaataagttgaaaacaatttatgaaca-tgtcataagctgtcttcataagctcttccaaatagcctcacaaaact 39602168  T
Q  263 tatgtcagtggataagctctaataag 288  Q
     ||| |||| | ||||||| ||||||    
T  39602167 gatgccagtagctaagctcaaataag 39602142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 222 - 267
Target Start/End: Original strand, 43046738 - 43046783
Alignment:
Q  222 aagctgttttcataagttcttccaaacagtcttacaaaacatatgt 267  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||    
T  43046738 aagctgttttcataagttctcccaaacagtctcacaaaacatatgt 43046783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 227
Target Start/End: Original strand, 46478684 - 46478767
Alignment:
Q  147 tgctataagt-ggttttataagctatct--tagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    |||||||||| ||||||||||||||| |  | |||||||||||||  |||| ||||||| ||||||||||| ||||||||||||    
T  46478684 tgctataagttggttttataagctatatattggagaacttatgaaaataagttgaaaaaagcttatgaaaactgtcataagctg 46478767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 494 - 541
Target Start/End: Original strand, 24204983 - 24205030
Alignment:
Q  494 atgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||  |||||| |||||||||||||||||||    
T  24204983 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcggacac 24205030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 494 - 541
Target Start/End: Complemental strand, 25775624 - 25775577
Alignment:
Q  494 atgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    |||||||||| ||||||||| ||||||| |||||||||||||||||||    
T  25775624 atgaagcacgaacactcctcggattaggcgtgtcctggtgtcggacac 25775577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 166 - 281
Target Start/End: Original strand, 38902083 - 38902197
Alignment:
Q  166 agctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatat 265  Q
    |||||||||  |||||| |||||  |||| ||||||   | |||||| | ||||||| ||||||||||||| |||||||||||||| || |||||| |||    
T  38902083 agctatcttgaagaactcatgaaaataagttgaaaacaacgtatgaacaatgtcatatgctgttttcataaattcttccaaacagt-ttgcaaaacttat 38902181  T
Q  266 gtcagtggataagctc 281  Q
    | |||| |||||||||    
T  38902182 gccagtagataagctc 38902197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 191 - 277
Target Start/End: Complemental strand, 42799993 - 42799909
Alignment:
Q  191 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataa 277  Q
    |||||||||||  |||| |||||| |||||| |  |||||||||||||||| ||||| ||| | ||||||||||||||||| |||||    
T  42799993 taagctgaaaa--gcttttgaaaactgtcatgacatgttttcataagttctcccaaagagtttcacaaaacatatgtcagtagataa 42799909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 46031004 - 46031082
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttct 241  Q
    |||| ||||||| |||||||||| ||  |||||||||||  ||||||||| | ||||||| ||||||||| ||||||||    
T  46031004 ataaactatcttggagaacttattaaaataagctgaaaacagcttatgaataatgtcataggctgttttcgtaagttct 46031082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 209
Target Start/End: Original strand, 47132309 - 47132391
Alignment:
Q  128 attaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttat 209  Q
    |||||||||||||||||| ||||||| | || ||||||||||||| || ||||| |||||||  |||| ||||||| ||||||    
T  47132309 attaaattgtttttgtatatgctataggttgtttttataagctatattggagaagttatgaaaataagttgaaaaaagcttat 47132391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 241
Target Start/End: Original strand, 49556900 - 49556950
Alignment:
Q  191 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttct 241  Q
    |||| ||||||| ||||||||||| ||||||||||||||||||||| ||||    
T  49556900 taagttgaaaaaagcttatgaaaattgtcataagctgttttcataaattct 49556950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 493 - 542
Target Start/End: Complemental strand, 1389956 - 1389907
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacaca 542  Q
    ||||||||||||||||||||  |||||||  |||||||||||||||||||    
T  1389956 tatgaagcacggacactccttggattaggcatgtcctggtgtcggacaca 1389907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 191 - 288
Target Start/End: Original strand, 26878242 - 26878339
Alignment:
Q  191 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    |||||||||||  | ||||||| | ||||||||||| |||||| |||||||  |||||||| | ||  ||| ||||||||| ||||||||| ||||||    
T  26878242 taagctgaaaacagtttatgaacaatgtcataagctattttcacaagttctctcaaacagtttcacgcaacttatgtcagtagataagctcgaataag 26878339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 493 - 538
Target Start/End: Original strand, 49651717 - 49651762
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcgga 538  Q
    ||||||||||||||||| ||| |||||||||||||| |||||||||    
T  49651717 tatgaagcacggacacttctcggattaggtgtgtcccggtgtcgga 49651762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 216 - 253
Target Start/End: Complemental strand, 54837038 - 54837001
Alignment:
Q  216 tgtcataagctgttttcataagttcttccaaacagtct 253  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  54837038 tgtcataagctgttttcataaattcttccaaacagtct 54837001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 178 - 258
Target Start/End: Original strand, 944591 - 944671
Alignment:
Q  178 gaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaa 258  Q
    |||| ||||||  |||| ||||||| | ||||| ||| ||||||||||| |||||||||||| | |||||||||| |||||    
T  944591 gaacatatgaaagtaagttgaaaaaagattatggaaattgtcataagctattttcataagttttcccaaacagtcatacaa 944671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 4401026 - 4401127
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgt 228  Q
    ||||||| |||| |||| |||||||||| ||||||  || ||| || |||||||||||||  |||| | ||||  ||||||| ||| |||||||||||||    
T  4401026 ttaaattattttcgtatatgctataagttgtttta--agttatattggagaacttatgaaaataagttaaaaacagcttatggaaattgtcataagctgt 4401123  T
Q  229 tttc 232  Q
    ||||    
T  4401124 tttc 4401127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 11610627 - 11610579
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| ||||||| |||||| | ||||||||||    
T  11610627 tatgaagcacggacactcctcagattaggcgtgtcccgatgtcggacac 11610579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 18427067 - 18427019
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    |||||| |||||||||||||| |||||||||||||| |||| |||||||    
T  18427067 tatgaaacacggacactcctcagattaggtgtgtcccggtgccggacac 18427019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 25074913 - 25074865
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||| ||||||||| ||||||||||||||  |||||||||||    
T  25074913 tatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacac 25074865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 27505369 - 27505321
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| |||||||  ||||| ||||||||||||    
T  27505369 tatgaagcacggacactcctcggattaggcatgtcccggtgtcggacac 27505321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 40052430 - 40052382
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||| ||||||||| ||||||| |||||| ||||||||||||    
T  40052430 tatgaagcacgaacactcctcggattaggcgtgtcccggtgtcggacac 40052382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 196
Target Start/End: Complemental strand, 44061114 - 44061046
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagct 196  Q
    ||||||||||||| |||  ||||||||| ||||| ||| | |||||||||||||||||||| |||||||    
T  44061114 ttaaattgtttttctataagctataagttgttttcatatgatatcttagagaacttatgaaattaagct 44061046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 52369905 - 52369857
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| || ||||||||||| ||||| ||||||    
T  52369905 tatgaagcacggacactcctcggaataggtgtgtcccggtgttggacac 52369857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 55401193 - 55401145
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| ||||||| |||||  ||||||||||||    
T  55401193 tatgaagcacggacactcctcggattaggcgtgtctcggtgtcggacac 55401145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 541
Target Start/End: Original strand, 4987222 - 4987269
Alignment:
Q  494 atgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    |||||| ||||||||||||| ||||||| |||||| ||||||||||||    
T  4987222 atgaagtacggacactcctcggattaggcgtgtcccggtgtcggacac 4987269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 20503583 - 20503536
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggaca 540  Q
    ||||||||||||||||||||| ||||||| |||||| |||||| ||||    
T  20503583 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcagaca 20503536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 528
Target Start/End: Complemental strand, 21861693 - 21861658
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcc 528  Q
    ||||||||||||||||||||| ||||||||||||||    
T  21861693 tatgaagcacggacactcctcggattaggtgtgtcc 21861658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 262
Target Start/End: Original strand, 26911627 - 26911698
Alignment:
Q  191 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaaca 262  Q
    |||| |||||||  |||||||||| ||||||||||||||||||||  || | |||||| |||| ||||||||    
T  26911627 taagttgaaaaaaacttatgaaaattgtcataagctgttttcatatattatcccaaacggtctcacaaaaca 26911698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 233
Target Start/End: Complemental strand, 28795910 - 28795839
Alignment:
Q  162 tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttca 233  Q
    |||||||||| ||||||||||||||||  |||||||||||  ||||| ||||| ||||| || | |||||||    
T  28795910 tataagctatattagagaacttatgaaaataagctgaaaagagcttaagaaaattgtcaaaaaccgttttca 28795839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 277
Target Start/End: Original strand, 37389196 - 37389311
Alignment:
Q  162 tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaac 261  Q
    ||||||||||||| ||| ||||||||   |||||| |||   || | |||| | ||||||||| |||||||||||||||| || || ||||| |||||||    
T  37389196 tataagctatcttggagtacttatgagaataagctaaaagcagcatttgaacaatgtcataagttgttttcataagttctcccgaagagtctcacaaaac 37389295  T
Q  262 atatgtcagtggataa 277  Q
     |||||| || |||||    
T  37389296 ttatgtctgtagataa 37389311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 40993276 - 40993323
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggaca 540  Q
    ||||||||| ||||||||||| ||||||| |||||| |||||||||||    
T  40993276 tatgaagcatggacactcctcggattaggcgtgtcccggtgtcggaca 40993323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 287
Target Start/End: Complemental strand, 46886783 - 46886624
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||| |||||||||  ||||||||  ||||| |||||||||||| |||||||| ||||  ||| ||||| |   |||| ||| | || |||||||||    
T  46886783 ttaaattatttttgtatgagctataagctgttttcataagctatcttggagaacttttgaaaataacctgaacataacttacgaacaatgccataagctg 46886684  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataa 287  Q
    ||||||| || ||  |||||||||||  |||||  |||| |||  ||||||||| |||||    
T  46886683 ttttcatcagctcacccaaacagtctctcaaaatttatgccagcagataagctcaaataa 46886624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 495 - 541
Target Start/End: Complemental strand, 12100385 - 12100339
Alignment:
Q  495 tgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    |||||||||| |||||||| || ||||||||||| ||||||||||||    
T  12100385 tgaagcacgggcactcctcggactaggtgtgtcccggtgtcggacac 12100339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 30956717 - 30956659
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatg 186  Q
    |||||||||||||||||  ||||||||| ||||| | |||||||||| |||||||||||    
T  30956717 ttaaattgtttttgtataggctataagttgttttcaaaagctatcttggagaacttatg 30956659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 129 - 186
Target Start/End: Complemental strand, 30972529 - 30972471
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatg 186  Q
    |||||||||||||||||  ||||||||| ||||| | |||||||||| |||||||||||    
T  30972529 ttaaattgtttttgtataggctataagttgttttcaaaagctatcttggagaacttatg 30972471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 201
Target Start/End: Complemental strand, 33883806 - 33883768
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaa 201  Q
    ||||||||||||||||||||||||||  |||||||||||    
T  33883806 ataagctatcttagagaacttatgaaaataagctgaaaa 33883768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 540
Target Start/End: Complemental strand, 3631796 - 3631755
Alignment:
Q  499 gcacggacactcctctgattaggtgtgtcctggtgtcggaca 540  Q
    ||||||||||||||| || |||| ||||||||||||||||||    
T  3631796 gcacggacactcctcggactaggcgtgtcctggtgtcggaca 3631755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 247 - 288
Target Start/End: Original strand, 5448542 - 5448583
Alignment:
Q  247 acagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||||||||||||| ||||||||| ||||||||| ||||||    
T  5448542 acagtcttacaaaacttatgtcagtagataagctcaaataag 5448583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 492 - 541
Target Start/End: Original strand, 15999950 - 15999999
Alignment:
Q  492 atatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    |||||| ||||||||||||||  ||||||| |||||| ||||||||||||    
T  15999950 atatgatgcacggacactccttggattaggcgtgtcccggtgtcggacac 15999999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 542
Target Start/End: Original strand, 16789586 - 16789635
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacaca 542  Q
    ||||||||| ||||||||||  |||||||||||||| | |||||||||||    
T  16789586 tatgaagcatggacactcctaggattaggtgtgtcccgttgtcggacaca 16789635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 493 - 554
Target Start/End: Complemental strand, 17276845 - 17276784
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacacatgaccccgacac 554  Q
    ||||||||||||||||| ||| ||||||||| |||  |||||||||||| || | |||||||    
T  17276845 tatgaagcacggacacttctcggattaggtgcgtctcggtgtcggacacgtgtcaccgacac 17276784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 527
Target Start/End: Original strand, 40150527 - 40150560
Alignment:
Q  494 atgaagcacggacactcctctgattaggtgtgtc 527  Q
    |||||||||||||||||||| |||||||||||||    
T  40150527 atgaagcacggacactcctcggattaggtgtgtc 40150560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 251
Target Start/End: Complemental strand, 47904082 - 47904049
Alignment:
Q  218 tcataagctgttttcataagttcttccaaacagt 251  Q
    |||||||||||||||||||||||| |||||||||    
T  47904082 tcataagctgttttcataagttctcccaaacagt 47904049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 541
Target Start/End: Complemental strand, 1509681 - 1509637
Alignment:
Q  497 aagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||| ||||||| |||| | ||||||||||||    
T  1509681 aagcacggacactcctccgattaggcgtgtaccggtgtcggacac 1509637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 533
Target Start/End: Original strand, 3730109 - 3730149
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtg 533  Q
    ||||||||| ||||||||||| |||||||||||||| ||||    
T  3730109 tatgaagcatggacactcctcggattaggtgtgtcccggtg 3730149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 14217021 - 14216973
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||| ||| ||||||||||||||  |||||| ||||    
T  14217021 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacac 14216973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 14223150 - 14223102
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||| ||| ||||||||||||||  |||||| ||||    
T  14223150 tatgaagcacggacacttctcggattaggtgtgtcccagtgtcgtacac 14223102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 496 - 528
Target Start/End: Original strand, 21256952 - 21256984
Alignment:
Q  496 gaagcacggacactcctctgattaggtgtgtcc 528  Q
    |||||||||||||||||| ||||||||||||||    
T  21256952 gaagcacggacactcctcggattaggtgtgtcc 21256984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 24684825 - 24684753
Alignment:
Q  216 tgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||||||| |||||||||||||||  |||||  |||| | ||||| |||| |||| ||||||||| ||||||    
T  24684825 tgtcataagttgttttcataagttcaaccaaaatgtctcaaaaaacttatgccagtagataagctcaaataag 24684753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 261
Target Start/End: Original strand, 34034158 - 34034210
Alignment:
Q  209 tgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaac 261  Q
    |||||| |||| ||||||||||||||||||||| | ||| ||||| |||||||    
T  34034158 tgaaaactgtcctaagctgttttcataagttctcctaaagagtctcacaaaac 34034210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 34235096 - 34235024
Alignment:
Q  216 tgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||||||||||| ||||||||||||  ||||| |||   |||||| ||||| ||| ||||||||| ||||||    
T  34235096 tgtcataagctgtattcataagttctctcaaacggtcacgcaaaacttatgttagtagataagctcgaataag 34235024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 220 - 260
Target Start/End: Complemental strand, 34637984 - 34637944
Alignment:
Q  220 ataagctgttttcataagttcttccaaacagtcttacaaaa 260  Q
    |||||||||||||||||||||| ||||||| ||| ||||||    
T  34637984 ataagctgttttcataagttctcccaaacaatctcacaaaa 34637944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 492 - 540
Target Start/End: Complemental strand, 37077489 - 37077441
Alignment:
Q  492 atatgaagcacggacactcctctgattaggtgtgtcctggtgtcggaca 540  Q
    |||||||||||||||| ||||  ||||||||||||||  ||||||||||    
T  37077489 atatgaagcacggacattccttggattaggtgtgtccccgtgtcggaca 37077441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 41961580 - 41961628
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||| ||| ||||||| ||||||  |||||||||||    
T  41961580 tatgaagcacggacacttctcggattaggcgtgtcccagtgtcggacac 41961628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 261
Target Start/End: Complemental strand, 42545408 - 42545356
Alignment:
Q  209 tgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaac 261  Q
    |||||| | ||||||||||||||||| |||||| ||||| ||||| |||||||    
T  42545408 tgaaaattatcataagctgttttcatgagttctcccaaatagtctaacaaaac 42545356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 2e-35; HSPs: 90)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 129 - 288
Target Start/End: Complemental strand, 17822956 - 17822796
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    |||||||||| || ||| |||||||||| ||||| |||||||||||| |||||||||||||  |||||| ||||| ||||||||||| ||||||||||||    
T  17822956 ttaaattgttattttatatgctataagttgttttcataagctatcttggagaacttatgaaaataagctaaaaaaagcttatgaaaaatgtcataagctg 17822857  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    |||||||| ||||| | ||| ||||| ||| ||| ||||||||| ||||||||| ||||||    
T  17822856 ttttcatatgttctcctaaatagtctcacagaacttatgtcagtagataagctcaaataag 17822796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 134 - 287
Target Start/End: Complemental strand, 21731742 - 21731588
Alignment:
Q  134 ttgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttc 232  Q
    |||||||||||| |||||||||| ||||| ||||||||| || ||||| |||||||  |||| ||||||| | ||||||||| ||| |||||||||||||    
T  21731742 ttgtttttgtatgtgctataagttgtttttataagctatattggagaatttatgaaagtaagttgaaaaaagtttatgaaaattgtgataagctgttttc 21731643  T
Q  233 ataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataa 287  Q
    ||||||||| ||||||| ||| ||||||| ||||||||| |||| |||| |||||    
T  21731642 ataagttctcccaaacaatctcacaaaacttatgtcagtagatatgctcaaataa 21731588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 165 - 280
Target Start/End: Complemental strand, 13126630 - 13126515
Alignment:
Q  165 aagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacata 264  Q
    |||||||||| |||||||||||||  |||||||||||| |||||||| || |||||||||||||||| ||||||||||||||||||||| ||||||| ||    
T  13126630 aagctatcttcgagaacttatgaaaataagctgaaaaaagcttatgataaatgtcataagctgtttttataagttcttccaaacagtctcacaaaactta 13126531  T
Q  265 tgtcagtggataagct 280  Q
    ||| ||| | ||||||    
T  13126530 tgttagtaggtaagct 13126515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 162 - 288
Target Start/End: Complemental strand, 25904280 - 25904154
Alignment:
Q  162 tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaac 261  Q
    |||||||| | || |||||||||| ||  |||||||||||| ||||||||||| || ||||||||||||||||||| ||| ||||||||||| ||||||     
T  25904280 tataagctgttttggagaacttataaaaataagctgaaaaaagcttatgaaaaatggcataagctgttttcataagctctcccaaacagtctcacaaaat 25904181  T
Q  262 atatgtcagtggataagctctaataag 288  Q
     ||||||| ||||||||||| ||||||    
T  25904180 ttatgtcattggataagctcaaataag 25904154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 129 - 261
Target Start/End: Complemental strand, 50681180 - 50681047
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggttt-tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||||| |||||||||| |||| |||||||||| || ||||| |||||||  |||  ||||||| ||||||||||| |||||| | |||    
T  50681180 ttaaattgtttttgtatatgctataagttgtttatataagctatattggagaaattatgaaaataaattgaaaaaagcttatgaaaattgtcattaactg 50681081  T
Q  228 ttttcataagttcttccaaacagtcttacaaaac 261  Q
    ||||||||||||||  |||||||||| |||||||    
T  50681080 ttttcataagttctctcaaacagtctcacaaaac 50681047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 159 - 288
Target Start/End: Original strand, 54426053 - 54426182
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaa 258  Q
    |||||||| |||| || |||||||||||||  |||  ||||||| ||||||||||| ||||||||||||||||| |||||||| |||| |||||| ||||    
T  54426053 ttttataatctatattggagaacttatgaaaataacttgaaaaaagcttatgaaaattgtcataagctgttttcctaagttctcccaagcagtctcacaa 54426152  T
Q  259 aacatatgtcagtggataagctctaataag 288  Q
    ||| |||| |||| ||||||||| ||||||    
T  54426153 aacttatgccagtagataagctcaaataag 54426182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 129 - 279
Target Start/End: Complemental strand, 53294205 - 53294054
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||||| |||||||||| ||||| |||| |||| ||||||||||||||||   ||||||||||  |||| ||||||   ||||||  ||    
T  53294205 ttaaattgtttttgtatatgctataagttgtttttataaactatattagagaacttatgaaaacaagctgaaaatagcttttgaaaaccatcataatttg 53294106  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagc 279  Q
    ||||||| |||| | |||||||||||||||||||  |||||||| |||||||    
T  53294105 ttttcatgagttttcccaaacagtcttacaaaactcatgtcagtagataagc 53294054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 158 - 288
Target Start/End: Original strand, 29657393 - 29657523
Alignment:
Q  158 gttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttaca 257  Q
    |||||| ||||||| |||||||| ||||||| ||||||| ||||| |||| |||||| ||||||||||||||||||||||||||  ||| || ||| |||    
T  29657393 gttttacaagctatattagagaagttatgaaattaagctcaaaaatgcttttgaaaattgtcataagctgttttcataagttctctcaagcaatctcaca 29657492  T
Q  258 aaacatatgtcagtggataagctctaataag 288  Q
    |||| | |||  || ||||||||| ||||||    
T  29657493 aaacttgtgttggtagataagctcaaataag 29657523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 159 - 266
Target Start/End: Complemental strand, 30668426 - 30668321
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaa 258  Q
    |||||||||||||||| || |  ||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||| ||||| | ||    
T  30668426 ttttataagctatcttggatagtttatgaaattaagctgaaaaag-cttatgaaaagtgtcataagctgttttcacaagttc-tccaaaaagtctcaaaa 30668329  T
Q  259 aacatatg 266  Q
    ||| ||||    
T  30668328 aacttatg 30668321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 137 - 266
Target Start/End: Original strand, 22030190 - 22030320
Alignment:
Q  137 tttttgtatttgctataagtggtt-ttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcata 235  Q
    ||||||||| |||||||||| ||| ||| ||| ||  ||||||||||||||||  ||| |||| ||| |||| |||||| ||||||||||||||||||||    
T  22030190 tttttgtatatgctataagttgttcttacaagttaaattagagaacttatgaaaataacctgagaaaagcttttgaaaattgtcataagctgttttcata 22030289  T
Q  236 agttcttccaaacagtcttacaaaacatatg 266  Q
    |||||| ||||| || || ||||||| ||||    
T  22030290 agttctcccaaataggctcacaaaacttatg 22030320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 159 - 288
Target Start/End: Complemental strand, 26924 - 26796
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaa 258  Q
    ||||||||||||| || |||||||||||||  ||| ||||||||| ||| |||||  ||||||||||||||||||||| ||||   ||||||||| ||||    
T  26924 ttttataagctatattggagaacttatgaaaataatctgaaaaag-cttgtgaaatttgtcataagctgttttcataatttctcggaaacagtctaacaa 26826  T
Q  259 aacatatgtcagtggataagctctaataag 288  Q
    | | |||| |||| ||||||||| ||||||    
T  26825 agcttatgccagttgataagctcaaataag 26796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 134 - 277
Target Start/End: Original strand, 2244032 - 2244179
Alignment:
Q  134 ttgtttttgtatt-tgctataagtggtttta---taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgtt 229  Q
    ||||||||||||| |||||||||| ||||||   |||||||| || |||||||||||||  |||| ||||||| | ||||||| | ||||||||||||||    
T  2244032 ttgtttttgtattatgctataagttgttttaatataagctatattggagaacttatgaaaataaggtgaaaaaagtttatgaatattgtcataagctgtt 2244131  T
Q  230 ttcataagttcttccaaacagtcttacaaaacatatgtcagtggataa 277  Q
    || | || |||| ||||||||| | | ||||| ||||||||| |||||    
T  2244132 tttaaaaattctcccaaacagtttcaaaaaacttatgtcagtagataa 2244179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 129 - 288
Target Start/End: Complemental strand, 27043921 - 27043761
Alignment:
Q  129 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    |||||||||||| ||||  |||||||| || |||||||| ||||||| |||||| ||||||| |||||| ||||    ||||| |   || ||||||||     
T  27043921 ttaaattgttttcgtataagctataagatgtttttataaactatcttggagaacgtatgaatataagctaaaaacaatttatggacgatgccataagcta 27043822  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||| ||||| |||||||||||||| | ||||||| ||||||||| ||||||||| ||||||    
T  27043821 tttgcataacttcttccaaacagtttcacaaaacttatgtcagtagataagctcaaataag 27043761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 165 - 288
Target Start/End: Original strand, 24169279 - 24169402
Alignment:
Q  165 aagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacata 264  Q
    |||||||||| |||| ||||||||  |||| |||||||  |||||||||| ||||||||||| |||| | |||||||  |||| ||||| ||||||| ||    
T  24169279 aagctatcttggagagcttatgaaaataagttgaaaaaatcttatgaaaaatgtcataagctatttttaaaagttctctcaaatagtctcacaaaactta 24169378  T
Q  265 tgtcagtggataagctctaataag 288  Q
    || |||| ||||| ||||||||||    
T  24169379 tgccagtagataaactctaataag 24169402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 159 - 261
Target Start/End: Complemental strand, 39603230 - 39603128
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaa 258  Q
    ||||||||| ||| || |||||||||||||  |||  | ||||| |||||| |||| ||||||||||||||||| |||||||| ||||||||||| ||||    
T  39603230 ttttataaggtatattggagaacttatgaaaataacttaaaaaaagcttataaaaattgtcataagctgttttcctaagttctcccaaacagtctcacaa 39603131  T
Q  259 aac 261  Q
    |||    
T  39603130 aac 39603128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 191 - 288
Target Start/End: Original strand, 41336802 - 41336899
Alignment:
Q  191 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    |||| ||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||  ||| ||||||| ||||| ||| ||||| ||| ||||||    
T  41336802 taagttgaaaaaagcttatgaaaactgtcataagctgttttcttaagttcttcctaactatctcacaaaacttatgtgagtagataaactcaaataag 41336899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 137 - 233
Target Start/End: Complemental strand, 55414503 - 55414406
Alignment:
Q  137 tttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttca 233  Q
    |||||| || |||||||| | ||||| ||||| |||||| |||||||||||||  |||| ||||||| ||||||||||| ||||||||||||||||||    
T  55414503 tttttgcatatgctataaattgttttcataagttatcttggagaacttatgaaaataagttgaaaaaagcttatgaaaaatgtcataagctgttttca 55414406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 3947702 - 3947750
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3947702 tatgaagcacggacactcctcggattaggtgtgtcctggtgtcggacac 3947750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 196 - 288
Target Start/End: Complemental strand, 15173326 - 15173234
Alignment:
Q  196 tgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    |||||||  |||||||||| ||||||||||| |||||||||  ||| ||||||||||| ||||||| ||||||||| |||||| || ||||||    
T  15173326 tgaaaaaaacttatgaaaattgtcataagctattttcataaagtctcccaaacagtctcacaaaacttatgtcagtagataagttcaaataag 15173234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 260
Target Start/End: Original strand, 21523585 - 21523668
Alignment:
Q  176 gagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaa 260  Q
    ||||| |||||||  ||||||||||||| |||||||||| ||||||||| ||||||||||| |||||||||||||| | ||||||    
T  21523585 gagaagttatgaaaataagctgaaaaag-cttatgaaaaatgtcataagttgttttcataaattcttccaaacagtgtcacaaaa 21523668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 288
Target Start/End: Original strand, 29388593 - 29388753
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||||  ||  |||||| ||||| |||||||||  | ||||| |||||||  |||| ||||||  || ||| |||| |||||||| |||    
T  29388593 ttaaattgtttttgtagatgtgataagtagtttttataagctatactggagaatttatgaaaataagttgaaaagagcatataaaaattgtcataaactg 29388692  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
     |||| |||||||| ||||||| ||||||||||| ||||| ||| |||||| || ||||||    
T  29388693 ctttcgtaagttctcccaaacaatcttacaaaacttatgttagtagataaggtcaaataag 29388753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 137 - 250
Target Start/End: Complemental strand, 46588157 - 46588042
Alignment:
Q  137 tttttgtatttgctataagtggtttt--ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcat 234  Q
    ||||| ||| |||||||||| |||||  ||||| ||| || |||||||||||||  |||| || |||||||||||||||| ||||||||| | ||||| |    
T  46588157 tttttatatatgctataagttgttttttataagttatattggagaacttatgaaaataagttggaaaaggcttatgaaaattgtcataagttattttcgt 46588058  T
Q  235 aagttcttccaaacag 250  Q
    ||||||| ||||||||    
T  46588057 aagttctaccaaacag 46588042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 159 - 250
Target Start/End: Complemental strand, 46592269 - 46592178
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacag 250  Q
    ||||||||| ||| || |||||||||||||  |||| || |||||||||||||||| ||||||||| | ||||  |||||||||||||||||    
T  46592269 ttttataagttatattggagaacttatgaaaataagttggaaaaggcttatgaaaattgtcataagttatttttgtaagttcttccaaacag 46592178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 131 - 236
Target Start/End: Complemental strand, 7839450 - 7839344
Alignment:
Q  131 aaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgtt 229  Q
    ||||||||||||||| |||||||| | ||||| ||||||||  ||  |||||||| |||  |||| ||||||| ||||||||||| ||||||||| ||||    
T  7839450 aaattgtttttgtatatgctataaattgtttttataagctagattgaagaacttacgaaaataagttgaaaaaagcttatgaaaattgtcataagttgtt 7839351  T
Q  230 ttcataa 236  Q
    |||||||    
T  7839350 ttcataa 7839344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 182 - 288
Target Start/End: Complemental strand, 49003912 - 49003806
Alignment:
Q  182 ttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctc 281  Q
    ||||||| |||||||| |||| ||||||||| | ||||||| ||| ||||||||  |||| |||||| || | ||||||| || ||||||||||||||||    
T  49003912 ttatgaaattaagctggaaaaagcttatgaacaatgtcatacgctcttttcatattttctcccaaaccgtttcacaaaacttacgtcagtggataagctc 49003813  T
Q  282 taataag 288  Q
     ||||||    
T  49003812 aaataag 49003806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 140 - 241
Target Start/End: Complemental strand, 50662818 - 50662716
Alignment:
Q  140 ttgtatttgctataagtggttt-tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagt 238  Q
    |||||| |||||||||| |||| |||||||||| || ||||| || ||||  |||| ||||||| ||||||||||| |||||| | ||||||||||||||    
T  50662818 ttgtatatgctataagttgtttatataagctatattggagaaattgtgaaaataagttgaaaaaagcttatgaaaattgtcattaactgttttcataagt 50662719  T
Q  239 tct 241  Q
    |||    
T  50662718 tct 50662716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 493 - 542
Target Start/End: Original strand, 18513176 - 18513225
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacaca 542  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||    
T  18513176 tatgaagcacggacactcctcagattaggcgtgtcctggtgtcggacaca 18513225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 191 - 280
Target Start/End: Complemental strand, 49939979 - 49939890
Alignment:
Q  191 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagct 280  Q
    |||||||||||  ||||||||| | ||||||||||| |||||||||||||||||||| ||||| ||||| | ||||  ||| ||||||||    
T  49939979 taagctgaaaacagcttatgaacaatgtcataagctcttttcataagttcttccaaatagtctcacaaagcttatgctagtagataagct 49939890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 288
Target Start/End: Complemental strand, 52315253 - 52315128
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaaca 262  Q
    ||||||||| || || ||||||||||  ||||||||||    |||||||| | ||| ||||| |||||| ||||||||||||||||| ||| |||||||     
T  52315253 ataagctattttggaaaacttatgaaaataagctgaaagcaacttatgaataatgtgataagttgttttgataagttcttccaaacaatctcacaaaact 52315154  T
Q  263 tatgtcagtggataagctctaataag 288  Q
    || |||||| ||||| ||| ||||||    
T  52315153 tacgtcagtagataaactcaaataag 52315128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 133 - 288
Target Start/End: Complemental strand, 35571718 - 35571562
Alignment:
Q  133 attgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgtttt 231  Q
    |||||||| ||||  ||||||||  ||||| ||||||||||||||||||||| ||||  |||| |||||   ||| ||||| ||||| ||||||||||||    
T  35571718 attgttttcgtataagctataagctgttttcataagctatcttagagaacttgtgaaaataagttgaaaccagctcatgaacagtgtaataagctgtttt 35571619  T
Q  232 cataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
     | ||||||| ||||||  ||  ||||||| ||||  ||| ||||||||| ||||||    
T  35571618 taaaagttctcccaaactatcccacaaaacttatgctagtagataagctcaaataag 35571562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 191 - 266
Target Start/End: Original strand, 56249566 - 56249640
Alignment:
Q  191 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatg 266  Q
    |||| ||||||| ||||||||||| |||||||||||||||| ||||||| ||||||||| ||| ||||||| ||||    
T  56249566 taagttgaaaaaagcttatgaaaa-tgtcataagctgttttgataagttgttccaaacaatctcacaaaacttatg 56249640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 129 - 261
Target Start/End: Original strand, 25332753 - 25332887
Alignment:
Q  129 ttaaattgtttttgtatttgctataag-tggttttataagctatcttag-agaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagct 226  Q
    |||||||||||||||||  ||| |||| |  |||||||||||||||||  ||||||||||||  |||||||||||   |||||||| | || |||||| |    
T  25332753 ttaaattgtttttgtataagctctaagctatttttataagctatcttatcagaacttatgaaaataagctgaaaacaacttatgaataatgccataagtt 25332852  T
Q  227 gttttcataagttcttccaaacagtcttacaaaac 261  Q
    ||||||  ||||||| ||||| ||||| |||||||    
T  25332853 gttttcgcaagttctcccaaatagtctcacaaaac 25332887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 169 - 251
Target Start/End: Original strand, 55064855 - 55064937
Alignment:
Q  169 tatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagt 251  Q
    |||||| |||||||||||||  |||| ||||||| |||  |||||| ||||||||| |||||||| ||||||| |||||||||    
T  55064855 tatcttggagaacttatgaaaataagatgaaaaaagctattgaaaaatgtcataagttgttttcaaaagttctcccaaacagt 55064937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 143 - 266
Target Start/End: Complemental strand, 40831106 - 40830982
Alignment:
Q  143 tatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttt-tcataagttc 240  Q
    ||||||| |||||| ||||| ||||||||  || |||||||||||||  |||| ||||||| |||||| |||  |||| |||||||||| |||||| |||    
T  40831106 tatttgcaataagttgtttttataagctagattggagaacttatgaa-ataagttgaaaaaagcttataaaagttgtcgtaagctgtttctcataatttc 40831008  T
Q  241 ttccaaacagtcttacaaaacatatg 266  Q
    |||| |||||||| ||||||| ||||    
T  40831007 ttccgaacagtctcacaaaacttatg 40830982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 493 - 538
Target Start/End: Original strand, 53381531 - 53381576
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcgga 538  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||    
T  53381531 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcgga 53381576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 269
Target Start/End: Complemental strand, 54069508 - 54069367
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||||| |||||||| | ||||| ||||| ||| ||  ||||| ||||||  |||| | ||||  ||||||||||| |||  |||||||    
T  54069508 ttaaattgtttttgtatatgctataatttgtttttataagttatattgaagaacatatgaaaataagttaaaaacagcttatgaaaattgttgtaagctg 54069409  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtca 269  Q
    |||||| || | || ||||||||||  ||||||| |||||||    
T  54069408 ttttcaaaaatcctaccaaacagtcccacaaaacttatgtca 54069367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 163 - 280
Target Start/End: Original strand, 55302263 - 55302380
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaaca 262  Q
    ||||||||| || || ||||||||||  |||||||||||| ||||| ||||| |||||||||||||||  ||||||| | |  ||||| || |||||||     
T  55302263 ataagctatgttggaaaacttatgaaaataagctgaaaaaagcttacgaaaattgtcataagctgtttctataagttttccggaacaggctcacaaaact 55302362  T
Q  263 tatgtcagtggataagct 280  Q
    |||| || | ||||||||    
T  55302363 tatgccattagataagct 55302380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 23292927 - 23292975
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| ||||||| |||||| ||||||||||||    
T  23292927 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacac 23292975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 288
Target Start/End: Complemental strand, 42404037 - 42403954
Alignment:
Q  204 gcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||||||||| |||||||||||||||||| || |||| ||||| || |  ||||||| ||||||||| ||||||||| ||||||    
T  42404037 gcttatgaaaattgtcataagctgttttcagaaattctcccaaatag-cacacaaaacttatgtcagttgataagctcaaataag 42403954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 131 - 253
Target Start/End: Original strand, 2996554 - 2996676
Alignment:
Q  131 aaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgtt 229  Q
    ||||||||||| |||  | ||||||| ||||| |||||||||||| |||| | ||||||  |||| ||||||| ||||||| | | ||||||||| ||||    
T  2996554 aaattgtttttatataagttataagttgttttcataagctatcttggagagcgtatgaaaataagttgaaaaaagcttatggaca-tgtcataagttgtt 2996652  T
Q  230 ttcataagttcttccaaacagtct 253  Q
    |||||||| |||  ||||||||||    
T  2996653 ttcataagctctctcaaacagtct 2996676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 11931409 - 11931362
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggaca 540  Q
    |||||||||||||||||||   ||||||||||||||||||||||||||    
T  11931409 tatgaagcacggacactccatggattaggtgtgtcctggtgtcggaca 11931362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 135 - 209
Target Start/End: Complemental strand, 16200066 - 16199991
Alignment:
Q  135 tgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttat 209  Q
    ||||||||||| |||||||||  ||||| |||||||||||| ||| |||||||||  |||||| ||||||||||||    
T  16200066 tgtttttgtatatgctataagctgttttcataagctatcttggaggacttatgaaaataagctaaaaaaggcttat 16199991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 17876284 - 17876237
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggaca 540  Q
    |||||||||| |||||||||  ||||||||||||||||||||||||||    
T  17876284 tatgaagcacagacactccttggattaggtgtgtcctggtgtcggaca 17876237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 494 - 541
Target Start/End: Original strand, 22440559 - 22440606
Alignment:
Q  494 atgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    |||||||||||||||||||| ||||||| ||||||| |||||||||||    
T  22440559 atgaagcacggacactcctcggattaggcgtgtcctagtgtcggacac 22440606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 148 - 266
Target Start/End: Original strand, 49202643 - 49202762
Alignment:
Q  148 gctataagtggtttta-taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaa 246  Q
    ||||||||| |||||  ||||||||||| || |||| |||||  |||| ||||||   |||||||| | ||| |||| ||| ||| ||||||||||||||    
T  49202643 gctataagttgttttcgtaagctatcttggataactaatgaaaataagttgaaaacaacttatgaacaatgtgataatctggttttataagttcttccaa 49202742  T
Q  247 acagtcttacaaaacatatg 266  Q
    ||||||| ||||||| ||||    
T  49202743 acagtctcacaaaacttatg 49202762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 163 - 277
Target Start/End: Original strand, 1706636 - 1706750
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaaca 262  Q
    |||| ||||||| || | ||||||||  |||| || |||  ||||||||| | || |||||||||||||||||| ||||  ||||| |||| |||||||     
T  1706636 ataaactatcttggacagcttatgaaaataagttggaaatagcttatgaacaatgccataagctgttttcataatttctctcaaaccgtctcacaaaact 1706735  T
Q  263 tatgtcagtggataa 277  Q
    ||||||||| |||||    
T  1706736 tatgtcagtagataa 1706750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 493 - 535
Target Start/End: Complemental strand, 40784071 - 40784029
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtc 535  Q
    ||||||||||||||||||||| |||||||||||||| ||||||    
T  40784071 tatgaagcacggacactcctcggattaggtgtgtcccggtgtc 40784029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 132 - 241
Target Start/End: Original strand, 41512633 - 41512743
Alignment:
Q  132 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttt 230  Q
    |||||||||||  | |||||||||| ||||| ||||||| |||   ||||||||||||  |||| ||| ||| ||||||||||||||| ||||||||| |    
T  41512633 aattgtttttgcgtatgctataagttgttttcataagctttctggaagaacttatgaaaataagatgataaaagcttatgaaaagtgttataagctgtat 41512732  T
Q  231 tcataagttct 241  Q
    |  ||||||||    
T  41512733 ttgtaagttct 41512743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 129 - 261
Target Start/End: Original strand, 20108988 - 20109121
Alignment:
Q  129 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    |||| |||||||||||| || |||||| || ||||||||| ||| ||||||||||| ||||  | ||  |||||| |||| |||||  | ||| ||| ||    
T  20108988 ttaagttgtttttgtatatggtataagctgtttttataagatatattagagaacttttgaaaatgagtcgaaaaaagcttgtgaaatttttcacaaggtg 20109087  T
Q  228 ttttcataagttcttccaaacagtcttacaaaac 261  Q
    |||||||||||||| ||||||  ||| |||||||    
T  20109088 ttttcataagttctcccaaaccttctcacaaaac 20109121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 495 - 589
Target Start/End: Complemental strand, 28084640 - 28084545
Alignment:
Q  495 tgaagcacggacactcctctgattaggtgtgtcctggtgtcggacacatgaccccgacaccaacacagacac--ataattacactaaattatgtgat 589  Q
    ||||||||||||||||||| ||||||| ||||||  ||||||||||| || | |||||| | ||||||||||   |||||||| | |||||||||||    
T  28084640 tgaagcacggacactcctcggattaggcgtgtcccagtgtcggacacgtgtcaccgaca-cgacacagacacttgtaattacattgaattatgtgat 28084545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 941363 - 941315
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||| || || |||||||||||||||| ||||||||||    
T  941363 tatgaagcacggacagtcttcggattaggtgtgtcctgatgtcggacac 941315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 19482797 - 19482749
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||| ||||||||| ||||||||||||||  |||||||||||    
T  19482797 tatgaagcacgaacactcctcggattaggtgtgtcccagtgtcggacac 19482749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 22234820 - 22234868
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||| ||||| ||| |||||| ||||||||||||||||||||    
T  22234820 tatgaagcacgaacacttctcggattagctgtgtcctggtgtcggacac 22234868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 24343631 - 24343583
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| || |||| |||||| ||||||||||||    
T  24343631 tatgaagcacggacactcctcagaataggcgtgtcccggtgtcggacac 24343583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 129 - 241
Target Start/End: Complemental strand, 37864043 - 37863933
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgt 228  Q
    ||||||||||||||| |  | ||||||  |||| |||||||||||| | ||  ||||||||| ||| ||||||   ||||||||  ||||||||||||||    
T  37864043 ttaaattgtttttgtttaagatataagctgtttcataagctatcttggtgaggttatgaatt-aaggtgaaaacaacttatgaac-gtgtcataagctgt 37863946  T
Q  229 tttcataagttct 241  Q
    |||||||||||||    
T  37863945 tttcataagttct 37863933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 40965389 - 40965341
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    |||||||||| |||||||||| ||||||| ||||| |||||||||||||    
T  40965389 tatgaagcaccgacactcctcagattaggcgtgtcttggtgtcggacac 40965341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 42640642 - 42640594
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||| ||||||| ||||||| ||||||||||| |||||||    
T  42640642 tatgaagcacggaaactcctcggattaggcgtgtcctggtgccggacac 42640594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 715546 - 715593
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggaca 540  Q
    ||||||||||||||||||||| ||||||| ||||||  ||||||||||    
T  715546 tatgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 715593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 752872 - 752919
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggaca 540  Q
    ||||||||||||||||||||| ||||||| ||||||  ||||||||||    
T  752872 tatgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 752919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 190 - 260
Target Start/End: Complemental strand, 3070003 - 3069932
Alignment:
Q  190 ttaagctgaaaaaggcttatgaaaagtgtcataagctgttttc-ataagttcttccaaacagtcttacaaaa 260  Q
    ||||| ||||||| ||||||||||| ||||||||| ||||||| | ||||||  ||||||||||| ||||||    
T  3070003 ttaagttgaaaaaagcttatgaaaaatgtcataagatgttttcaaaaagttcacccaaacagtctcacaaaa 3069932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 11596298 - 11596345
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggaca 540  Q
    ||||||||||||||||||||| ||||||| |||||| | |||||||||    
T  11596298 tatgaagcacggacactcctcagattaggcgtgtcccgatgtcggaca 11596345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 179 - 286
Target Start/End: Original strand, 23459658 - 23459764
Alignment:
Q  179 aacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataag 278  Q
    ||||||||||| |||| ||||||   ||||| || | ||||||||||| |||||||||||||| | |||||||||||| | || ||||  ||| ||||||    
T  23459658 aacttatgaatataagttgaaaataacttattaaca-tgtcataagcttttttcataagttctccgaaacagtcttaccatacttatgctagtagataag 23459756  T
Q  279 ctctaata 286  Q
    ||| ||||    
T  23459757 ctcaaata 23459764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 279
Target Start/End: Original strand, 25903860 - 25903934
Alignment:
Q  204 gcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagc 279  Q
    ||||||||||| || |||||||||||| |||||||||| ||||  ||||| ||||||| ||||| ||| |||||||    
T  25903860 gcttatgaaaaatgccataagctgttt-cataagttctcccaataagtctcacaaaacttatgttagtagataagc 25903934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 254
Target Start/End: Complemental strand, 43886159 - 43886097
Alignment:
Q  191 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtctt 254  Q
    |||||||||||  ||||||||||| || ||||||||||||||||||||| ||  ||||||||||    
T  43886159 taagctgaaaatagcttatgaaaa-tgccataagctgttttcataagttatttgaaacagtctt 43886097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 221 - 288
Target Start/End: Complemental strand, 49940165 - 49940098
Alignment:
Q  221 taagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    |||||||||||||||||||||  |||||||||| ||||||| ||||| ||  | ||||||| ||||||    
T  49940165 taagctgttttcataagttctctcaaacagtctcacaaaacttatgttagcaggtaagctcaaataag 49940098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 217 - 288
Target Start/End: Original strand, 55437144 - 55437215
Alignment:
Q  217 gtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    |||||||| ||||||||||||||||| |||||| | | ||||||| |||| |||| ||||| ||| ||||||    
T  55437144 gtcataagttgttttcataagttctttcaaacaatttcacaaaacttatggcagtagataaactcaaataag 55437215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 232
Target Start/End: Original strand, 1407970 - 1408040
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaag-gcttatgaaaagtgtcataagctgttttc 232  Q
    |||||||||||  || || |||||||  ||||||||||||  ||||||||||| |||||||||||||||||    
T  1407970 ataagctatctaggaaaatttatgaagataagctgaaaaacagcttatgaaaaatgtcataagctgttttc 1408040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 542
Target Start/End: Original strand, 17425347 - 17425397
Alignment:
Q  492 atatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacaca 542  Q
    ||||||||||| |||||||||| ||||||| ||||||| ||||| ||||||    
T  17425347 atatgaagcacagacactcctcggattaggcgtgtccttgtgtctgacaca 17425397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 175 - 241
Target Start/End: Original strand, 20109611 - 20109677
Alignment:
Q  175 agagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttct 241  Q
    ||||||||||| ||  | ||| ||||||  |||||||||| |||||||||||||||||| |||||||    
T  20109611 agagaacttataaaaatcagcagaaaaaaacttatgaaaaatgtcataagctgttttcaaaagttct 20109677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 216 - 266
Target Start/End: Original strand, 20719770 - 20719820
Alignment:
Q  216 tgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatg 266  Q
    ||||||||||||||||| |||||||||||||| ||||  ||||||| ||||    
T  20719770 tgtcataagctgttttcttaagttcttccaaatagtcgcacaaaacttatg 20719820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 281
Target Start/End: Original strand, 22662024 - 22662142
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaaca 262  Q
    |||||||||| | ||||||||||||   ||||| |||||   || ||||  | |||||||| ||| ||||||||||||  ||||||||||| || ||||     
T  22662024 ataagctatcatggagaacttatgacaataagcagaaaacaactcatgatcaatgtcataaactgatttcataagttcccccaaacagtctcactaaact 22662123  T
Q  263 tatgtcagtggataagctc 281  Q
    || |||||| |||||||||    
T  22662124 tacgtcagtagataagctc 22662142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 163 - 281
Target Start/End: Original strand, 22666503 - 22666621
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaaca 262  Q
    |||||||||| | ||||||||||||   ||||| |||||   || ||||  | |||||||| ||| ||||||||||||  ||||||||||| || ||||     
T  22666503 ataagctatcatggagaacttatgacaataagcagaaaacaactcatgatcaatgtcataaactgatttcataagttcccccaaacagtctcactaaact 22666602  T
Q  263 tatgtcagtggataagctc 281  Q
    || |||||| |||||||||    
T  22666603 tacgtcagtagataagctc 22666621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 138 - 251
Target Start/End: Original strand, 29912936 - 29913049
Alignment:
Q  138 ttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataa 236  Q
    |||||||| || || |||| ||||| |||||||||||| || ||||||| ||  |||||||||||   || | ||||| ||||| ||||| |||||||||    
T  29912936 ttttgtatatgttaaaagtcgttttcataagctatcttggacaacttataaaaataagctgaaaagaactaaggaaaaatgtca-aagctattttcataa 29913034  T
Q  237 gttcttccaaacagt 251  Q
    ||||| |||||||||    
T  29913035 gttctcccaaacagt 29913049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 287
Target Start/End: Original strand, 40174633 - 40174695
Alignment:
Q  225 ctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataa 287  Q
    ||||||||||||||| | ||||||||||| ||||||| ||||| ||| ||||| ||| |||||    
T  40174633 ctgttttcataagttatcccaaacagtctcacaaaacttatgttagtagataaactcaaataa 40174695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 288
Target Start/End: Original strand, 43505984 - 43506074
Alignment:
Q  198 aaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||| ||||||||||| | ||||||||| ||||||  ||| || || |||||||| ||||||| | |||| |||||||| ||| ||||||    
T  43505984 aaaaaagcttatgaaaactctcataagctattttcacgagtcctccctaacagtctcacaaaacttttgtcggtggataaactcaaataag 43506074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 488
Target Start/End: Original strand, 1338301 - 1338330
Alignment:
Q  459 acattttagttgattttaatagtttaggga 488  Q
    ||||||||||||||||||||||||||||||    
T  1338301 acattttagttgattttaatagtttaggga 1338330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 492 - 541
Target Start/End: Original strand, 30982807 - 30982856
Alignment:
Q  492 atatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||| |  ||||||| |||||| ||||||||||||    
T  30982807 atatgaagcacggacactctttggattaggcgtgtcccggtgtcggacac 30982856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 441 - 485
Target Start/End: Original strand, 41107 - 41151
Alignment:
Q  441 tgagagtatggtttaggaacattttagttgattttaatagtttag 485  Q
    |||||| || ||||||| ||||||||||||||||||| |||||||    
T  41107 tgagagcatagtttagggacattttagttgattttaacagtttag 41151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 944603 - 944651
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    |||||||| | || ||||||| |||||||||||||| ||||||||||||    
T  944603 tatgaagctcagagactcctcagattaggtgtgtcccggtgtcggacac 944651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 2361916 - 2361964
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    |||||||||||||||||| || |||||||||||||  |||||| |||||    
T  2361916 tatgaagcacggacactcgtcagattaggtgtgtctcggtgtcagacac 2361964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 541
Target Start/End: Original strand, 3712458 - 3712502
Alignment:
Q  497 aagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||| ||||||  |||||| ||||||||||||    
T  3712458 aagcacggacactcctcagattagccgtgtcccggtgtcggacac 3712502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 492 - 528
Target Start/End: Complemental strand, 4383485 - 4383449
Alignment:
Q  492 atatgaagcacggacactcctctgattaggtgtgtcc 528  Q
    |||||||||||||||||||||| ||||||| ||||||    
T  4383485 atatgaagcacggacactcctcggattaggcgtgtcc 4383449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 509 - 541
Target Start/End: Complemental strand, 10133811 - 10133779
Alignment:
Q  509 tcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||| |||||||||||||||||||||||||||    
T  10133811 tcctcagattaggtgtgtcctggtgtcggacac 10133779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 129 - 188
Target Start/End: Complemental strand, 15177293 - 15177233
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtgg-ttttataagctatcttagagaacttatgaa 188  Q
    |||||||||| || ||| |||||||||||| |||||||||||||  ||||||||| |||||    
T  15177293 ttaaattgttcttctatgtgctataagtggtttttataagctatactagagaactaatgaa 15177233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 521
Target Start/End: Complemental strand, 23386276 - 23386248
Alignment:
Q  493 tatgaagcacggacactcctctgattagg 521  Q
    |||||||||||||||||||||||||||||    
T  23386276 tatgaagcacggacactcctctgattagg 23386248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 24613631 - 24613679
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||  ||||||  ||||||||||||| |||||    
T  24613631 tatgaagcacggacactcctaggattagacgtgtcctggtgtcagacac 24613679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 243
Target Start/End: Complemental strand, 28614864 - 28614785
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttc 243  Q
    |||||||||| |||||||||||||||  |||||||||||  ||||||| | | ||||||||  ||||| |||||| |||||    
T  28614864 ataagctatcctagagaacttatgaaaataagctgaaaagagcttatggata-tgtcataaattgtttccataagctcttc 28614785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 497 - 541
Target Start/End: Complemental strand, 30838335 - 30838291
Alignment:
Q  497 aagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||| | ||||| ||||| |||||||||||||    
T  30838335 aagcacggacactcctcgggttaggcgtgtcttggtgtcggacac 30838291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 35161154 - 35161106
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    |||||||||||||||||  || |||||||||||| | ||||||||||||    
T  35161154 tatgaagcacggacacttttcggattaggtgtgttccggtgtcggacac 35161106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 215 - 251
Target Start/End: Complemental strand, 39178271 - 39178235
Alignment:
Q  215 gtgtcataagctgttttcataagttcttccaaacagt 251  Q
    ||||||||||| ||||||||||||||| |||||||||    
T  39178271 gtgtcataagcggttttcataagttctcccaaacagt 39178235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 1e-33; HSPs: 88)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 129 - 281
Target Start/End: Original strand, 41851514 - 41851667
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||||| |||||||||| ||||| | |||||||||| ||||| ||||||| ||||||||| ||| ||||||||||||||||||||| ||    
T  41851514 ttaaattgtttttgtatatgctataagttgttttcagaagctatcttggagaatttatgaaattaagctgagaaaagcttatgaaaagtgtcataagttg 41851613  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctc 281  Q
    ||| ||||| |||| |||| |||||| ||||||| | ||||| | |||||||||    
T  41851614 tttccataaattctcccaatcagtctcacaaaacttttgtcaatagataagctc 41851667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 129 - 287
Target Start/End: Complemental strand, 15757750 - 15757590
Alignment:
Q  129 ttaaattgttttt-gtatttgctataagtggt-tttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagct 226  Q
    ||||||||||||| |||| |||||||||| || ||||||||||||   ||||||| ||||||  |||||||||||| |||| |||||| ||||||||||     
T  15757750 ttaaattgttttttgtatatgctataagttgtatttataagctatacaagagaacgtatgaaaataagctgaaaaaagcttctgaaaattgtcataagca 15757651  T
Q  227 gttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataa 287  Q
    |||||||||| |||| |||| |||||| ||||||| |||| ||||  |||||||| |||||    
T  15757650 gttttcataaattctcccaagcagtctcacaaaacttatgccagtaaataagctcaaataa 15757590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 129 - 281
Target Start/End: Original strand, 45229491 - 45229643
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgt 228  Q
    ||||||||||||||||| || ||| | || ||| |||||||||||| |||||||||||||  |||||||||||| ||| ||||||| ||||||||| | |    
T  45229491 ttaaattgtttttgtatatgttatcattgttttcataagctatcttcgagaacttatgaaaataagctgaaaaaagctaatgaaaaatgtcataaggtct 45229590  T
Q  229 tttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctc 281  Q
    ||||||||||||| |||||| || |  || ||| |||| |||| |||||||||    
T  45229591 tttcataagttctcccaaacggtgtggcataacttatgccagtagataagctc 45229643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 129 - 287
Target Start/End: Original strand, 1625879 - 1626038
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    |||||||||||| ||||  | ||||||| ||||| |||||||||||| ||||||||| |||  | |||||||||   |||||||| | |||||||||||     
T  1625879 ttaaattgttttcgtataagttataagttgttttcataagctatcttggagaacttacgaaaatcagctgaaaacatcttatgaacattgtcataagcta 1625978  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataa 287  Q
     |||||||||||||  |||| ||||||||||||| |||||||| |||||||||| |||||    
T  1625979 ctttcataagttctctcaaatagtcttacaaaacttatgtcaggggataagctcaaataa 1626038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 131 - 280
Target Start/End: Complemental strand, 43279616 - 43279466
Alignment:
Q  131 aaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgtt 229  Q
    |||||||||||||||  ||||||||| ||||| ||||||||| || |||||||| ||||  |||| ||||||| ||||||||||| ||||||||||||||    
T  43279616 aaattgtttttgtat--gctataagttgtttttataagctatattggagaacttgtgaaaataagttgaaaaaagcttatgaaaattgtcataagctgtt 43279519  T
Q  230 ttcataagt--tcttccaaacagtcttacaaaacatatgtcagtggataagct 280  Q
    ||||||| |  ||| ||||||||||| ||||||| ||||  ||| ||||||||    
T  43279518 ttcataaattctctcccaaacagtctcacaaaacttatgctagtagataagct 43279466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 129 - 250
Target Start/End: Complemental strand, 41812181 - 41812061
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgt 228  Q
    ||||||||||||||||| ||||| |||  |||| | |||||||||| || |||||| ||| | ||| ||||||| ||||||||||| |||||||||||||    
T  41812181 ttaaattgtttttgtatatgctacaagatgtttcaaaagctatcttggaaaacttaggaaat-aagttgaaaaaagcttatgaaaaatgtcataagctgt 41812083  T
Q  229 tttcataagttcttccaaacag 250  Q
    ||||| ||||||| ||||||||    
T  41812082 tttcaaaagttctcccaaacag 41812061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 129 - 280
Target Start/End: Original strand, 18066107 - 18066259
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||  |||  ||||||||  ||||| |||||||||||| ||||||||| |||  |||| ||||||  ||||||||  | ||||||||||||    
T  18066107 ttaaattgttttcatataagctataagctgttttcataagctatcttggagaacttaagaaaataaggtgaaaatagcttatgagcaatgtcataagctg 18066206  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagct 280  Q
    |||||||||||| | | ||||||| | ||||||| ||||||||| ||||||||    
T  18066207 ttttcataagttgtacaaaacagtttcacaaaacttatgtcagtagataagct 18066259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 158 - 288
Target Start/End: Original strand, 750679 - 750809
Alignment:
Q  158 gttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttaca 257  Q
    |||| |||||||||||| ||||||||||| |  |||||| ||||  ||||||||| | |||||| |||| ||||||||||||||| |||||| ||| |||    
T  750679 gtttcataagctatcttggagaacttatgcaaataagctcaaaacagcttatgaacaatgtcattagctcttttcataagttcttgcaaacactctcaca 750778  T
Q  258 aaacatatgtcagtggataagctctaataag 288  Q
    ||||||||| |||  ||||| ||| ||||||    
T  750779 aaacatatgccaggagataaactcaaataag 750809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 129 - 281
Target Start/End: Complemental strand, 39659600 - 39659447
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||| | || ||||| | ||||| ||||||||| ||||||||||||||||  |||| ||| ||| |||||  |||  ||||||||||||    
T  39659600 ttaaattgtttttgtctatgttataacttgtttttataagctatattagagaacttatgaagataaggtgacaaaagcttagaaaatttgtcataagctg 39659501  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctc 281  Q
    ||||| ||||||||  || |||| || || |||| ||||||||| |||||||||    
T  39659500 ttttcgtaagttctctcagacagcctcacgaaacttatgtcagtagataagctc 39659447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 129 - 261
Target Start/End: Complemental strand, 41241223 - 41241091
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||||| |||||||||| |||||  |||| |||||| || ||||| |||| ||||||||||||| ||||||| |||| || ||||  ||    
T  41241223 ttaaattgtttttgtatatgctataagtagttttcctaagttatcttggaaaacttgtgaaattaagctgaaaaaagcttatggaaag-gttataatttg 41241125  T
Q  228 ttttcataagttcttccaaacagtcttacaaaac 261  Q
    |||||| ||||||| ||||||| ||| |||||||    
T  41241124 ttttcacaagttctaccaaacaatctcacaaaac 41241091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 159 - 267
Target Start/End: Complemental strand, 7035627 - 7035519
Alignment:
Q  159 ttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaa 258  Q
    |||||||| ||||||| || ||||||||||  ||||| |||||   ||||||||  |||||||||||||||| |||||||||||| ||||||||| ||||    
T  7035627 ttttataaactatcttggaaaacttatgaaaataagcggaaaacaccttatgaactgtgtcataagctgtttccataagttcttcaaaacagtctcacaa 7035528  T
Q  259 aacatatgt 267  Q
    ||| |||||    
T  7035527 aacttatgt 7035519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 167 - 258
Target Start/End: Original strand, 33981140 - 33981231
Alignment:
Q  167 gctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaa 258  Q
    |||||||| ||||| ||||||| ||||| ||||||| |||||||||| ||||||||||| ||||||||||||| || || ||||||| ||||    
T  33981140 gctatcttggagaatttatgaaattaagttgaaaaaagcttatgaaatgtgtcataagccgttttcataagttttttcagacagtctcacaa 33981231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 132 - 253
Target Start/End: Complemental strand, 5745873 - 5745751
Alignment:
Q  132 aattgtttttgtatttgctataagtggttt-tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttt 230  Q
    |||||||||| ||| ||||||||||  ||| |||||||||| || ||| ||||| |||  | || || |||| ||||||||||| |||||||||||||||    
T  5745873 aattgtttttttatatgctataagttatttctataagctatatttgaggacttaggaaaattagttggaaaaagcttatgaaaattgtcataagctgttt 5745774  T
Q  231 tcataagttcttccaaacagtct 253  Q
    |||||| |||||| |||||||||    
T  5745773 tcataaattcttctaaacagtct 5745751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 167 - 288
Target Start/End: Complemental strand, 7928351 - 7928229
Alignment:
Q  167 gctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtc-ataagctgttttcataagttcttccaaacagtcttacaaaacatat 265  Q
    |||||||| |||||||||||||  |||||||||||   |||||||| | |||| |||||||||||||| |||||||| | |||||||| ||| ||| |||    
T  7928351 gctatcttggagaacttatgaaaataagctgaaaacaacttatgaacaatgtccataagctgttttcaaaagttctttctaacagtctcacacaacttat 7928252  T
Q  266 gtcagtggataagctctaataag 288  Q
    |||| | ||||||||| ||||||    
T  7928251 gtcaatagataagctcaaataag 7928229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 147 - 288
Target Start/End: Original strand, 26202025 - 26202167
Alignment:
Q  147 tgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttcca 245  Q
    |||||||||| ||||| ||||| ||| || |||||||||||||  |||| ||||||| ||||||||||| ||||||||| |||| |||||| ||||  ||    
T  26202025 tgctataagttgtttttataagatatattggagaacttatgaaaataagttgaaaaaagcttatgaaaattgtcataagttgttctcataaattctagca 26202124  T
Q  246 aacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    || | ||| ||||||| ||||||||  |||||| || ||||||    
T  26202125 aagaatctcacaaaacttatgtcagcagataagttcaaataag 26202167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 163 - 261
Target Start/End: Complemental strand, 41293219 - 41293121
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaac 261  Q
    |||||||||| | ||| |||||||||| |||||||||||  |||||||  || |||||||||||||||| ||||||||| ||||| ||||| |||||||    
T  41293219 ataagctatcctggagtacttatgaatataagctgaaaacagcttatgcgaaatgtcataagctgtttttataagttctcccaaatagtctcacaaaac 41293121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 129 - 276
Target Start/End: Complemental strand, 12464564 - 12464416
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||||| |||||||||   |||| |||||||||||| |||||||| ||||  |||||||||||| |||| |||||  |||| ||||||     
T  12464564 ttaaattgtttttgtatatgctataagctattttcataagctatcttggagaacttgtgaaaataagctgaaaaaagcttgtgaaatatgtcgtaagctt 12464465  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggata 276  Q
    ||||  |||| | | ||||||| ||| ||||||| ||||| ||| ||||    
T  12464464 tttttgtaagatgtcccaaacattctcacaaaacttatgttagtagata 12464416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 288
Target Start/End: Original strand, 15305701 - 15305813
Alignment:
Q  176 gagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggat 275  Q
    |||||||||||||  |||| |||||||  |||||||||| || |||||| |||| ||| ||||||| ||||||||| | ||||||| ||||||| | |||    
T  15305701 gagaacttatgaaaataagttgaaaaaaacttatgaaaattgccataagttgttgtcaaaagttctaccaaacagtttcacaaaacttatgtcaatagat 15305800  T
Q  276 aagctctaataag 288  Q
    |||||| ||||||    
T  15305801 aagctcaaataag 15305813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 204 - 280
Target Start/End: Original strand, 30331806 - 30331882
Alignment:
Q  204 gcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagct 280  Q
    |||| |||||| ||||||||| | |||||||||||||| ||||||||||| ||||||| ||||||||| ||||||||    
T  30331806 gcttgtgaaaattgtcataaggttttttcataagttctcccaaacagtctcacaaaacttatgtcagtagataagct 30331882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 169 - 288
Target Start/End: Complemental strand, 31561792 - 31561673
Alignment:
Q  169 tatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtc 268  Q
    |||||| |||||||||||||  |||||| ||| |  ||||||||||  |||||| |||||||||| ||||| | ||||||||| ||||||||| |||||     
T  31561792 tatcttggagaacttatgaaagtaagcttaaacaatcttatgaaaaacgtcatatgctgttttcaaaagttttcccaaacagttttacaaaacttatgtt 31561693  T
Q  269 agtggataagctctaataag 288  Q
    ||| ||||| ||| ||||||    
T  31561692 agtagataatctcaaataag 31561673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 129 - 247
Target Start/End: Original strand, 32592566 - 32592684
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    |||||||||||| ||||  ||||||||| ||||| |||||| || || |||||||||||||  |||| ||| ||| ||||||||||| |||| ||||||     
T  32592566 ttaaattgtttt-gtatacgctataagttgtttttataagcaatattggagaacttatgaaaataagttgagaaaagcttatgaaaattgtcgtaagcta 32592664  T
Q  228 ttttcataagttcttccaaa 247  Q
    |||||||||||||| |||||    
T  32592665 ttttcataagttctcccaaa 32592684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 163 - 288
Target Start/End: Original strand, 4606939 - 4607064
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaaca 262  Q
    |||||||||||| |||||||||||||  |||||| |||   ||| ||||| | ||||||||| |||||||| ||||||| ||||| ||||| |||||||     
T  4606939 ataagctatcttggagaacttatgaaaataagctaaaagcagctcatgaacaatgtcataagttgttttcacaagttctcccaaatagtctcacaaaact 4607038  T
Q  263 tatgtcagtggataagctctaataag 288  Q
    ||| |  || ||||||||| ||||||    
T  4607039 tatattggtagataagctcaaataag 4607064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 175 - 288
Target Start/End: Original strand, 13325596 - 13325709
Alignment:
Q  175 agagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtgga 274  Q
    ||||||||||||||  | |||||||||| |||||||  || |||||||||||||||||| ||||||| || |||| ||| | ||||| ||| ||| | ||    
T  13325596 agagaacttatgaaaatgagctgaaaaaagcttatgtgaaatgtcataagctgttttcaaaagttctcccgaacaatctcataaaacttatatcaattga 13325695  T
Q  275 taagctctaataag 288  Q
    ||||||| ||||||    
T  13325696 taagctcaaataag 13325709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 129 - 288
Target Start/End: Original strand, 2416292 - 2416452
Alignment:
Q  129 ttaaattgtttttgtatttgctataag-tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||  |||  |||||||| || ||||||||| ||| | ||||||||||||||  || |||||||   |||| |||| | || || ||||||    
T  2416292 ttaaattgttttgatataagctataagctgtttttataagttatataagagaacttatgaaagtatgctgaaattagcttgtgaacaatgacaaaagctg 2416391  T
Q  228 ttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    |||| |||||||||||||| |||| | ||||||| ||||| ||| ||||| ||| ||||||    
T  2416392 ttttaataagttcttccaagcagtttcacaaaacttatgttagtagataaactcaaataag 2416452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 137 - 288
Target Start/End: Original strand, 20952342 - 20952494
Alignment:
Q  137 tttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcata 235  Q
    ||||| ||| |||||||||| ||||| || |||||| || |||||||||||||  |||| ||||||| | | ||||||| || ||||| |||||||||||    
T  20952342 tttttttatatgctataagttgtttttattagctatattggagaacttatgaaaataagttgaaaaaagttaatgaaaattggcataaactgttttcata 20952441  T
Q  236 agttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||||   ||| ||||| ||||||| | || ||||  |||||||| ||||||    
T  20952442 agttctcttaaatagtctaacaaaacttttgccagtatataagctcaaataag 20952494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 18840954 - 18841001
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggaca 540  Q
    ||||||||||||||||||||| |||||||||||||| |||||||||||    
T  18840954 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggaca 18841001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 129 - 258
Target Start/End: Complemental strand, 33319903 - 33319775
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||| ||||||||||| | ||||||   ||||| |||| ||||||| |||||||||||||  |||||||||||| |||||| |||  |||||||||||     
T  33319903 ttaaactgtttttgtatatactataaactgttttcataaactatcttggagaacttatgaaaataagctgaaaaaagcttattaaa--tgtcataagcta 33319806  T
Q  228 ttttcataagttcttccaaacagtcttacaa 258  Q
    |||  | ||||||| ||||||||||| ||||    
T  33319805 tttataaaagttctcccaaacagtctcacaa 33319775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 288
Target Start/End: Original strand, 42419853 - 42419932
Alignment:
Q  209 tgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    |||||| ||||||||||||||||| |||||||| ||||||||||| | ||||| ||||||||  ||||| ||| ||||||    
T  42419853 tgaaaaatgtcataagctgttttcgtaagttctcccaaacagtctcaaaaaacttatgtcagaagataaactcaaataag 42419932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 216 - 258
Target Start/End: Complemental strand, 5902553 - 5902511
Alignment:
Q  216 tgtcataagctgttttcataagttcttccaaacagtcttacaa 258  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  5902553 tgtcataagctgttttcataagttcttccaaacagtctcacaa 5902511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 205 - 255
Target Start/End: Complemental strand, 28677673 - 28677624
Alignment:
Q  205 cttatgaaaagtgtcataagctgttttcataagttcttccaaacagtctta 255  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  28677673 cttatgaaaa-tgtcataagctgttttcataagttctcccaaacagtctta 28677624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 179 - 288
Target Start/End: Original strand, 449877 - 449986
Alignment:
Q  179 aacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataag 278  Q
    ||||||| || ||||| | ||||  ||||||||||| |||||||||||||||||| |||| || ||||||| ||| | ||||| ||||  ||| ||||||    
T  449877 aacttatcaaattaagttaaaaatagcttatgaaaaatgtcataagctgttttcaaaagtcctcccaaacaatctcataaaacttatgctagtagataag 449976  T
Q  279 ctctaataag 288  Q
    ||| ||||||    
T  449977 ctcaaataag 449986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 128 - 267
Target Start/End: Original strand, 12289774 - 12289915
Alignment:
Q  128 attaaattgtttttg-tatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagc 225  Q
    ||||||||||||||| ||  || ||||||| ||||| ||||  ||| || |||||||||||||  |||| ||||||| ||||||||| | |||||||| |    
T  12289774 attaaattgtttttggtacatgttataagttgtttttataatttatattggagaacttatgaaaataagttgaaaaaagcttatgaatattgtcataaac 12289873  T
Q  226 tgttttcataagttcttccaaacagtcttacaaaacatatgt 267  Q
    |||||| |  |||||| ||||||||| |||| |||| |||||    
T  12289874 tgtttttaatagttctcccaaacagtattacgaaacttatgt 12289915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 164 - 253
Target Start/End: Original strand, 16451133 - 16451222
Alignment:
Q  164 taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtct 253  Q
    ||||||||||| |||||||  ||||  |||||||||||  ||| ||||| | ||||||||| |||||||||||||||| |||||| ||||    
T  16451133 taagctatcttggagaactcgtgaaaataagctgaaaacagctcatgaacaatgtcataagttgttttcataagttctcccaaacggtct 16451222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 156 - 253
Target Start/End: Original strand, 33192209 - 33192304
Alignment:
Q  156 tggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtct 253  Q
    |||||| |||||||||| | |||| ||||| ||| |||||||||||  ||||||| | | |||||||| |||||||||||||||||| ||||||||||    
T  33192209 tggtttcataagctatcctggagagcttataaatataagctgaaaacagcttatggata-tgtcataaactgttttcataagttctt-caaacagtct 33192304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 198 - 266
Target Start/End: Original strand, 24100977 - 24101045
Alignment:
Q  198 aaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatg 266  Q
    ||||| ||||||||| | ||||||||| ||||| |||||||||| ||||||||||| ||||||| ||||    
T  24100977 aaaaaagcttatgaatattgtcataaggtgtttccataagttctcccaaacagtctcacaaaacttatg 24101045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 37419872 - 37419824
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| ||||||| |||||| ||||||||||||    
T  37419872 tatgaagcacggacactcctcggattaggcgtgtcccggtgtcggacac 37419824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 163 - 271
Target Start/End: Complemental strand, 40682450 - 40682343
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaaca 262  Q
    ||||| |||||| |||||||||||||  |||| ||||||   |||||||| | ||||||||||| |||| | ||||||| ||||||| ||| |||||||     
T  40682450 ataagatatctt-gagaacttatgaaaataagttgaaaacaacttatgaacaatgtcataagctattttaacaagttctcccaaacaatctcacaaaact 40682352  T
Q  263 tatgtcagt 271  Q
    |||||||||    
T  40682351 tatgtcagt 40682343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 42659214 - 42659142
Alignment:
Q  216 tgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    |||||||||||||||||| || |||| ||||||||||| ||||||| |||| ||||  |||||||| ||||||    
T  42659214 tgtcataagctgttttcaaaacttctcccaaacagtctcacaaaacttatgccagtaaataagctcaaataag 42659142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 493 - 560
Target Start/End: Complemental strand, 18622720 - 18622654
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacacatgaccccgacaccaacac 560  Q
    ||||||||||||||||||||| ||||| |||||||| ||||| ||||| |||| | ||||||||||||    
T  18622720 tatgaagcacggacactcctcggattaagtgtgtcccggtgtaggacatatga-cacgacaccaacac 18622654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 162 - 241
Target Start/End: Original strand, 20926516 - 20926594
Alignment:
Q  162 tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttct 241  Q
    |||||||||| ||||||||||||||||  |||| ||||||| ||| ||||||| |||||||| ||  |||||||||||||    
T  20926516 tataagctatattagagaacttatgaaaataagttgaaaaaagctaatgaaaattgtcataaact-atttcataagttct 20926594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 163 - 281
Target Start/End: Complemental strand, 26143696 - 26143580
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaaca 262  Q
    |||||||| ||| |||||||||||||  |||||||||||   | | |||| | || |||||| ||||||| |||||||| |||||||||||  |||||      
T  26143696 ataagctaacttggagaacttatgaaaataagctgaaaataacctgtgaacaatgacataagttgttttcgtaagttctcccaaacagtct--caaaatt 26143599  T
Q  263 tatgtcagtggataagctc 281  Q
    ||||||||| |||||||||    
T  26143598 tatgtcagtagataagctc 26143580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 129 - 251
Target Start/End: Original strand, 26626852 - 26626975
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    |||||||||||| ||||  |||| |||  ||||| ||||||||||||  ||||||||||||  ||| |||||||  | ||||||| | |||||||||||     
T  26626852 ttaaattgttttcgtataagctagaagctgttttcataagctatcttgcagaacttatgaaaataacctgaaaacagattatgaacaatgtcataagcta 26626951  T
Q  228 ttttcataagttcttccaaacagt 251  Q
    ||||| |||||||| ||| |||||    
T  26626952 ttttcgtaagttctcccatacagt 26626975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 493 - 544
Target Start/End: Complemental strand, 44860449 - 44860398
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacacatg 544  Q
    |||||||||||||||||||||  ||||||||||||| | |||||||||||||    
T  44860449 tatgaagcacggacactcctcgaattaggtgtgtcccgatgtcggacacatg 44860398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 494 - 540
Target Start/End: Original strand, 2438661 - 2438707
Alignment:
Q  494 atgaagcacggacactcctctgattaggtgtgtcctggtgtcggaca 540  Q
    |||||||||||||||||||| ||||||| |||||| |||||||||||    
T  2438661 atgaagcacggacactcctcggattaggcgtgtcccggtgtcggaca 2438707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 143 - 288
Target Start/End: Original strand, 9174808 - 9174954
Alignment:
Q  143 tatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttct 241  Q
    ||||| |||||||  ||||| ||||||||||||| ||| ||||||||  |||||||||||  ||||||||| | ||||||||| |||||| | |||  |     
T  9174808 tatttactataagctgttttcataagctatcttacagagcttatgaaaataagctgaaaatagcttatgaacaatgtcataagttgttttaacaagcccc 9174907  T
Q  242 tccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
      |||||||||| ||| ||| |||| || | ||||||||| ||||||    
T  9174908 ctcaaacagtctcacataacttatgccaatagataagctcaaataag 9174954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 191 - 277
Target Start/End: Complemental strand, 19608661 - 19608575
Alignment:
Q  191 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataa 277  Q
    |||||| ||||  ||||||||| | ||||||||||||| || |||||||||  |||||||||| | ||||| ||||||||| |||||    
T  19608661 taagctcaaaatagcttatgaagaatgtcataagctgtgtttataagttctcgcaaacagtctcataaaacctatgtcagtagataa 19608575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 250
Target Start/End: Complemental strand, 40776101 - 40776067
Alignment:
Q  216 tgtcataagctgttttcataagttcttccaaacag 250  Q
    |||||||||||||||||||||||||||||||||||    
T  40776101 tgtcataagctgttttcataagttcttccaaacag 40776067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 216 - 258
Target Start/End: Complemental strand, 44606114 - 44606072
Alignment:
Q  216 tgtcataagctgttttcataagttcttccaaacagtcttacaa 258  Q
    ||||||||| ||||||||||||||||||||||||||| |||||    
T  44606114 tgtcataagttgttttcataagttcttccaaacagtcgtacaa 44606072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 162 - 243
Target Start/End: Original strand, 1647249 - 1647329
Alignment:
Q  162 tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttc 243  Q
    ||||||||||  |||||| |||||| |  |||||||||||  ||||||||  | ||||||||||||||||||||||||||||    
T  1647249 tataagctattatagagagcttatggaaataagctgaaaacagcttatgagca-tgtcataagctgttttcataagttcttc 1647329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 493 - 542
Target Start/End: Original strand, 10535686 - 10535735
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacaca 542  Q
    ||||||||||| ||||||||| ||||||| ||||||||||||| ||||||    
T  10535686 tatgaagcacgaacactcctcggattaggcgtgtcctggtgtcagacaca 10535735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 160 - 277
Target Start/End: Complemental strand, 10619279 - 10619162
Alignment:
Q  160 tttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaa 259  Q
    |||||||||||  || ||| |||||||||  |||||||||||| |||   ||||| || |||||||||||||||| |||||| ||||   |||| |||||    
T  10619279 tttataagctagattggagtacttatgaaaataagctgaaaaatgctcgagaaaattgacataagctgttttcatgagttctcccaaggggtctcacaaa 10619180  T
Q  260 acatatgtcagtggataa 277  Q
    || | ||||||| |||||    
T  10619179 acttgtgtcagtagataa 10619162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 219 - 288
Target Start/End: Original strand, 27317449 - 27317518
Alignment:
Q  219 cataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    |||||| ||||||||||||||||  |||||||||| | ||||| |||||| || ||||||||| ||||||    
T  27317449 cataagttgttttcataagttctctcaaacagtctcataaaacttatgtcggtagataagctcaaataag 27317518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 129 - 253
Target Start/End: Original strand, 36114398 - 36114523
Alignment:
Q  129 ttaaattgtttttgtatttgctataagt-ggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    |||||||||||||||||| |||| || | ||||| |||||||||||| |||| ||||| ||  |||||| ||||  |||| |||| | | |||| || ||    
T  36114398 ttaaattgtttttgtattagctaaaaataggtttcataagctatcttggagatcttataaaaataagctaaaaacagcttttgaacaatttcattagttg 36114497  T
Q  228 ttttcataagttcttccaaacagtct 253  Q
    |||| | ||||||| |||||||||||    
T  36114498 ttttaacaagttctcccaaacagtct 36114523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 129 - 237
Target Start/End: Original strand, 40279176 - 40279285
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    |||||||||||| ||||  | ||||||| ||||| ||||||||| || |||||||||||||  | |||||||||  | ||||||| | || |||||| ||    
T  40279176 ttaaattgttttggtataagatataagttgttttcataagctatgttggagaacttatgaaaattagctgaaaatagtttatgaacaatgccataagttg 40279275  T
Q  228 ttttcataag 237  Q
    ||||||||||    
T  40279276 ttttcataag 40279285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 177 - 241
Target Start/End: Original strand, 2227194 - 2227258
Alignment:
Q  177 agaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttct 241  Q
    |||||||| |||  |||||||||||| | ||||||||| ||||||||||||||||  ||||||||    
T  2227194 agaacttacgaaaataagctgaaaaatgtttatgaaaaatgtcataagctgtttttttaagttct 2227258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 269
Target Start/End: Original strand, 12194965 - 12195073
Alignment:
Q  162 tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcat-aagctgttttcataagttcttccaaacagtcttacaaaa 260  Q
    |||||| ||| || |||||||| ||||  |||| ||||||| ||||||||||| |||||| |||||||||| |  |||||| ||||||||| | || |||    
T  12194965 tataagttatattggagaacttgtgaaaataagttgaaaaaagcttatgaaaattgtcataaagctgtttttaatagttctcccaaacagtatgacgaaa 12195064  T
Q  261 catatgtca 269  Q
    | |||||||    
T  12195065 cttatgtca 12195073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 26769640 - 26769592
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| ||||||| ||||||  |||||||||||    
T  26769640 tatgaagcacggacactcctcggattaggcgtgtcccagtgtcggacac 26769592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 28596587 - 28596539
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| ||||||| ||||||  |||||||||||    
T  28596587 tatgaagcacggacactcctcggattaggagtgtccgagtgtcggacac 28596539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 266
Target Start/End: Original strand, 36534781 - 36534885
Alignment:
Q  162 tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaac 261  Q
    |||||||||| |  ||||| | |||||  |||||||||||  | ||||||| | | | |||||||||||||||||||| | ||||||||||| |||||||    
T  36534781 tataagctatataggagaattaatgaaaataagctgaaaatagattatgaacaattttataagctgttttcataagttatcccaaacagtctcacaaaac 36534880  T
Q  262 atatg 266  Q
     ||||    
T  36534881 ttatg 36534885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 38117100 - 38117148
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    |||||||||||||||| |||| ||||||| |||||| ||||||||||||    
T  38117100 tatgaagcacggacacccctcggattaggcgtgtcccggtgtcggacac 38117148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 181 - 241
Target Start/End: Original strand, 43570446 - 43570505
Alignment:
Q  181 cttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttct 241  Q
    ||||||||  |||||| |||||| |||||||| | ||||||||||||||||||||||||||    
T  43570446 cttatgaaaataagctaaaaaag-cttatgaacaatgtcataagctgttttcataagttct 43570505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 11223794 - 11223841
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggaca 540  Q
    ||||||||||||||||||||| ||||||| |||||| |||||| ||||    
T  11223794 tatgaagcacggacactcctcagattaggcgtgtcccggtgtcagaca 11223841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 544
Target Start/End: Original strand, 24975256 - 24975307
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacacatg 544  Q
    ||||||||||||||||||||| |||||| | |||||  ||||||||||||||    
T  24975256 tatgaagcacggacactcctcagattagatttgtcccagtgtcggacacatg 24975307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 242
Target Start/End: Original strand, 41407280 - 41407395
Alignment:
Q  129 ttaaattgttttt-gtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagct 226  Q
    ||||||||||||| |||| ||||||||||  |||| ||||| | |||| |||||||| ||||  ||| || ||| | ||||||||||| || |||||||     
T  41407280 ttaaattgttttttgtatatgctataagttatttttataagttttctttgagaacttgtgaaaataaccttaaacaagcttatgaaaaatgccataagcc 41407379  T
Q  227 gttttcataagttctt 242  Q
    ||||| ||||||||||    
T  41407380 gttttaataagttctt 41407395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 215 - 281
Target Start/End: Complemental strand, 7043734 - 7043668
Alignment:
Q  215 gtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctc 281  Q
    |||||||||| | ||||||||||||||| |||||||| | ||||||| ||||| |||  ||||||||    
T  7043734 gtgtcataagttattttcataagttctttcaaacagtatcacaaaacttatgtaagtatataagctc 7043668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 494 - 544
Target Start/End: Complemental strand, 19942382 - 19942332
Alignment:
Q  494 atgaagcacggacactcctctgattaggtgtgtcctggtgtcggacacatg 544  Q
    |||||||| ||||||||||| ||||||| |||||| |||||| ||||||||    
T  19942382 atgaagcatggacactcctcggattaggcgtgtcccggtgtcagacacatg 19942332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 205 - 247
Target Start/End: Original strand, 20933787 - 20933829
Alignment:
Q  205 cttatgaaaagtgtcataagctgttttcataagttcttccaaa 247  Q
    |||||||||| |||||||| ||||||||||||||||| |||||    
T  20933787 cttatgaaaattgtcataaactgttttcataagttctcccaaa 20933829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 133 - 289
Target Start/End: Complemental strand, 29628830 - 29628672
Alignment:
Q  133 attgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgtttt 231  Q
    |||||||||||||  ||||||||| ||| | |||||||||||| || || ||||| |  |||||||||||    ||||||| | | | ||||| | ||||    
T  29628830 attgtttttgtataagctataagttgttctcataagctatcttggaaaatttatggaaataagctgaaaacaatttatgaacaattttataagatttttt 29628731  T
Q  232 c-ataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataagg 289  Q
      ||||||||||||| || |||| ||||||| |||| |||| ||||||||| |||||||    
T  29628730 ttataagttcttccagactgtctcacaaaacttatgacagtagataagctcaaataagg 29628672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 220 - 258
Target Start/End: Original strand, 32837393 - 32837431
Alignment:
Q  220 ataagctgttttcataagttcttccaaacagtcttacaa 258  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  32837393 ataagctgttttcataagttctcccaaacagtctcacaa 32837431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 191 - 249
Target Start/End: Original strand, 33503049 - 33503106
Alignment:
Q  191 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaaca 249  Q
    |||||||||||  ||||||||||| |||||||||||| |||||||| |||| |||||||    
T  33503049 taagctgaaaatagcttatgaaaa-tgtcataagctgatttcataaattctcccaaaca 33503106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 198 - 288
Target Start/End: Complemental strand, 38916330 - 38916240
Alignment:
Q  198 aaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||| |||||||||||||| | |||||| |||||||||||||| | |||||  || ||||||| ||||   || ||||||||| ||||||    
T  38916330 aaaaaagcttatgaaaagtggcgtaagcttttttcataagttctcctaaacaacctcacaaaacctatgctggtagataagctcaaataag 38916240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 268
Target Start/End: Original strand, 44590097 - 44590143
Alignment:
Q  222 aagctgttttcataagttcttccaaacagtcttacaaaacatatgtc 268  Q
    ||||||||||||||||||||| ||||| |||| ||||||| ||||||    
T  44590097 aagctgttttcataagttctttcaaacggtctcacaaaacttatgtc 44590143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 249
Target Start/End: Original strand, 1801734 - 1801767
Alignment:
Q  216 tgtcataagctgttttcataagttcttccaaaca 249  Q
    |||||||||||||||||||||||||| |||||||    
T  1801734 tgtcataagctgttttcataagttctcccaaaca 1801767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 253
Target Start/End: Complemental strand, 23956120 - 23955999
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgt 228  Q
    |||||||||||||||| ||  | ||||| |||||||||||| | ||  |||| |||||||  |||| ||||||| ||||||| ||| |||| ||||||      
T  23956120 ttaaattgtttttgtaatt--tttaagttgttttataagctgtattgaagaatttatgaaaataagttgaaaaaagcttatg-aaattgtcgtaagctta 23956024  T
Q  229 tttcataagttcttccaaacagtct 253  Q
    |||| || ||||| |||||||||||    
T  23956023 tttcgtatgttctcccaaacagtct 23955999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 164 - 241
Target Start/End: Complemental strand, 23974547 - 23974471
Alignment:
Q  164 taagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttct 241  Q
    |||||||| || |||||||||||||  | |||  |||||  ||| |||||| ||||||||||||||||||||||||||    
T  23974547 taagctatatttgagaacttatgaaaatgagccaaaaaaa-cttgtgaaaattgtcataagctgttttcataagttct 23974471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 253
Target Start/End: Complemental strand, 32106803 - 32106766
Alignment:
Q  216 tgtcataagctgttttcataagttcttccaaacagtct 253  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  32106803 tgtcataagctgttttcataagttctcacaaacagtct 32106766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 174 - 251
Target Start/End: Complemental strand, 43529903 - 43529827
Alignment:
Q  174 tagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagt 251  Q
    |||||| ||||||||  ||| |||||||  ||||||||| | || |||||||||||||||||| |||| |||||||||    
T  43529903 tagagagcttatgaaaataaactgaaaatagcttatgaaca-tggcataagctgttttcataaattctcccaaacagt 43529827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 191 - 251
Target Start/End: Original strand, 787374 - 787433
Alignment:
Q  191 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagt 251  Q
    |||||||||||  ||||||| | | ||||||||||||||||||||||||||  ||||||||    
T  787374 taagctgaaaacagcttatggaca-tgtcataagctgttttcataagttctcacaaacagt 787433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 11863929 - 11864005
Alignment:
Q  177 agaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtct 253  Q
    ||||||||| ||  |||| | ||||| | ||||||||| ||||||||| |||||||| | ||||| |||||||||||    
T  11863929 agaacttattaaaataagttaaaaaaagtttatgaaaaatgtcataagttgttttcaaatgttctcccaaacagtct 11864005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 15972991 - 15972943
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||| || || |||||||||||||| || |||||||||    
T  15972991 tatgaagcacggacattcttcggattaggtgtgtcccggcgtcggacac 15972943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 462 - 490
Target Start/End: Original strand, 28122105 - 28122133
Alignment:
Q  462 ttttagttgattttaatagtttagggacc 490  Q
    |||||||||||||||||||||||||||||    
T  28122105 ttttagttgattttaatagtttagggacc 28122133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 252
Target Start/End: Original strand, 29430824 - 29430860
Alignment:
Q  216 tgtcataagctgttttcataagttcttccaaacagtc 252  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  29430824 tgtcataagctattttcataagttcttccaaatagtc 29430860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 31744365 - 31744437
Alignment:
Q  216 tgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    |||| ||||||||||||| |||||||  |||||||||| | ||||| |||||| || ||||||| | ||||||    
T  31744365 tgtcttaagctgttttcaaaagttctctcaaacagtctcagaaaacttatgtcggtagataagcccaaataag 31744437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 557 - 589
Target Start/End: Original strand, 36409631 - 36409663
Alignment:
Q  557 acacagacacataattacactaaattatgtgat 589  Q
    |||| ||||||||||||||||||||||||||||    
T  36409631 acaccgacacataattacactaaattatgtgat 36409663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 37559095 - 37559047
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| ||||| | |||| | ||||||||||||    
T  37559095 tatgaagcacggacactcctcggattaagcgtgtaccggtgtcggacac 37559047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 129 - 224
Target Start/End: Complemental strand, 39073780 - 39073684
Alignment:
Q  129 ttaaattgtttttgtatttgctataagt-ggttttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataag 224  Q
    ||||||||||||||||| ||||||||||   ||||||||||||| || |||||||  ||||  |||| ||||  |  |||||||||| |||||||||    
T  39073780 ttaaattgtttttgtatatgctataagtaatttttataagctatattggagaactagtgaaaataagttgaacgaaacttatgaaaattgtcataag 39073684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 163 - 271
Target Start/End: Original strand, 42457962 - 42458070
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaaca 262  Q
    ||||||||||||||||||| ||||||  |||||||||||   |||||  ||| |||  |||| |||||||||||  ||| | ||||| ||| |||||||     
T  42457962 ataagctatcttagagaacatatgaaaataagctgaaaacaacttattgaaaatgttttaagttgttttcataaactctcctaaacactctcacaaaact 42458061  T
Q  263 tatgtcagt 271  Q
    |||| ||||    
T  42458062 tatgccagt 42458070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 42511323 - 42511371
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| ||||||  ||||||  |||||||||||    
T  42511323 tatgaagcacggacactcctcggattagccgtgtccctgtgtcggacac 42511371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 2e-23; HSPs: 52)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 132 - 271
Target Start/End: Complemental strand, 20368268 - 20368129
Alignment:
Q  132 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttt 230  Q
    ||||||||||||||  | ||||||| ||||| ||||||| |||| |||||||||||||  |||| |||||   ||||||||| | ||||||||| |||||    
T  20368268 aattgtttttgtatgagttataagttgttttcataagctttcttggagaacttatgaaaataagttgaaactagcttatgaaca-tgtcataagttgttt 20368170  T
Q  231 tcataagttcttccaaacagtcttacaaaacatatgtcagt 271  Q
    ||||||||||| ||||| ||||||||||||| |||||||||    
T  20368169 tcataagttctcccaaatagtcttacaaaacttatgtcagt 20368129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 131 - 233
Target Start/End: Complemental strand, 34430550 - 34430447
Alignment:
Q  131 aaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgtt 229  Q
    ||||||||||||||| || ||||||  ||||| |||||||||||| ||||| |||||||  |||||||||||| |||||||| || ||||||||||||||    
T  34430550 aaattgtttttgtatatgttataaggtgttttcataagctatcttggagaagttatgaaaataagctgaaaaaagcttatgataaatgtcataagctgtt 34430451  T
Q  230 ttca 233  Q
    ||||    
T  34430450 ttca 34430447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 182 - 266
Target Start/End: Original strand, 848022 - 848106
Alignment:
Q  182 ttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatg 266  Q
    |||||||  |||||||||||| ||||| ||||| |||||||||| ||||| ||||||||||||||||||||| ||||||| ||||    
T  848022 ttatgaaaataagctgaaaaaagcttaagaaaaatgtcataagcagtttttataagttcttccaaacagtctcacaaaacttatg 848106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 163 - 271
Target Start/End: Original strand, 31813175 - 31813283
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaaca 262  Q
    |||||||||||| |||||| ||||||  ||||||||||| |||||||||| | | ||||||||  |||||||||||||| ||||| ||||| |||||||     
T  31813175 ataagctatcttggagaacatatgaaaataagctgaaaacggcttatgaacaatctcataagcaattttcataagttctcccaaatagtctcacaaaact 31813274  T
Q  263 tatgtcagt 271  Q
    |||| ||||    
T  31813275 tatgccagt 31813283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 493 - 554
Target Start/End: Complemental strand, 31959268 - 31959207
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacacatgaccccgacac 554  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||||| | |||||||    
T  31959268 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacacatgtcgccgacac 31959207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 163 - 233
Target Start/End: Original strand, 9763574 - 9763644
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttca 233  Q
    ||||||||| ||  |||||||||||| ||||| ||||||| |||||| |||||||||||||||||||||||    
T  9763574 ataagctatattgtagaacttatgaaattaagttgaaaaaagcttatcaaaagtgtcataagctgttttca 9763644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 132 - 271
Target Start/End: Original strand, 6536597 - 6536734
Alignment:
Q  132 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttt 230  Q
    |||||||||||||| |||||||||| ||||| | ||||||| || ||||| |||||||  |||| ||||||| ||||||||||| ||   ||||||| ||    
T  6536597 aattgtttttgtatatgctataagttgtttttagaagctatattggagaatttatgaaaataagttgaaaaaagcttatgaaaattgctgtaagctg-tt 6536695  T
Q  231 tcataagttcttccaaacagtcttacaaaacatatgtcagt 271  Q
    | |||| |||| ||||||||||  ||||||| |||||||||    
T  6536696 tgataaattctcccaaacagtc--acaaaacttatgtcagt 6536734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 141 - 285
Target Start/End: Original strand, 24982696 - 24982841
Alignment:
Q  141 tgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagtt 239  Q
    ||||| |||||||||  ||||| ||||| ||| || ||||||||||||   |||||| ||||| ||| || |||| |||||||||||||| ||| | |||    
T  24982696 tgtatatgctataagctgttttcataagttattttggagaacttatgagggtaagctaaaaaaagctcattaaaaatgtcataagctgttctcaaatgtt 24982795  T
Q  240 cttccaaacagtcttacaaaacatatgtcagtggataagctctaat 285  Q
    || | ||||||||| ||||||| ||||| ||| |||||| ||||||    
T  24982796 ctccaaaacagtctcacaaaacttatgttagtagataagatctaat 24982841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 208 - 253
Target Start/End: Original strand, 30926578 - 30926623
Alignment:
Q  208 atgaaaagtgtcataagctgttttcataagttcttccaaacagtct 253  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  30926578 atgaaaattgtcataagctgttttcataagttcttccaaacagtct 30926623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 176 - 279
Target Start/End: Complemental strand, 9912234 - 9912131
Alignment:
Q  176 gagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggat 275  Q
    |||||||||||||  |||||| ||||  ||||||||| | |||||||||||| ||||||||||||| | ||||||||   |||||| ||| ||||| |||    
T  9912234 gagaacttatgaaaataagctcaaaacagcttatgaacaatgtcataagctggtttcataagttctccgaaacagtcgcccaaaacttatatcagtagat 9912135  T
Q  276 aagc 279  Q
    ||||    
T  9912134 aagc 9912131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 177 - 288
Target Start/End: Original strand, 34430743 - 34430853
Alignment:
Q  177 agaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggata 276  Q
    ||||||||||||  |||| |  |||| || |||||||| ||||||||| ||||||||||| || | ||||||| ||||||||||| ||| ||||| ||||    
T  34430743 agaacttatgaaaataagtttgaaaaagcatatgaaaattgtcataagttgttttcataaattatcccaaacaatcttacaaaacttat-tcagttgata 34430841  T
Q  277 agctctaataag 288  Q
    ||||| ||||||    
T  34430842 agctcaaataag 34430853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 132 - 250
Target Start/End: Original strand, 35099019 - 35099137
Alignment:
Q  132 aattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttt 230  Q
    |||||||||||||| || ||||||| ||||| |||||||||||||||| | || ||||  |||| |||||||  |||| ||||| |||||| ||||||||    
T  35099019 aattgtttttgtatatgttataagttgttttcataagctatcttagagtatttttgaaaataagttgaaaaa-acttacgaaaaatgtcattagctgttt 35099117  T
Q  231 tcataagttcttccaaacag 250  Q
    || ||| |||| ||||||||    
T  35099118 tcctaaattctcccaaacag 35099137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 495 - 541
Target Start/End: Original strand, 8389411 - 8389457
Alignment:
Q  495 tgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||| |||||||||||||| ||||||||||||    
T  8389411 tgaagcacggacactcctcggattaggtgtgtcccggtgtcggacac 8389457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 253
Target Start/End: Original strand, 2735048 - 2735173
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||| |||||||||   |||||||  ||||| |||||| |||||  | ||||||||||  ||||| |||||  ||||||||||| |||||||||| |    
T  2735048 ttaaattatttttgtataatctataagctgttttcataagcaatcttgaacaacttatgaaaataagccgaaaacagcttatgaaaaatgtcataagccg 2735147  T
Q  228 ttttcataagttcttccaaacagtct 253  Q
    |||||||||||| |  ||||||||||    
T  2735148 ttttcataagttatctcaaacagtct 2735173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 237
Target Start/End: Complemental strand, 9093647 - 9093538
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    |||||||||||| ||||  ||||||||  ||||| ||||||| |||||||||||||| |||  |||||||||||  | |||| || | |||||||||||     
T  9093647 ttaaattgttttcgtataagctataagctgttttcataagctgtcttagagaacttaagaaaataagctgaaaacaggttattaacaatgtcataagcta 9093548  T
Q  228 ttttcataag 237  Q
    ||||||||||    
T  9093547 ttttcataag 9093538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 493 - 542
Target Start/End: Original strand, 9107300 - 9107349
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacaca 542  Q
    |||||||||||| |||||||| |||||||||||||| |||||||||||||    
T  9107300 tatgaagcacgggcactcctcggattaggtgtgtcccggtgtcggacaca 9107349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 167 - 244
Target Start/End: Original strand, 31624108 - 31624184
Alignment:
Q  167 gctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttcc 244  Q
    |||||||| ||||| |||||||  |||| ||||||  ||||||||| | |||||||||||||||||||||||||||||    
T  31624108 gctatcttggagaaattatgaaaataagttgaaaacagcttatgaaca-tgtcataagctgttttcataagttcttcc 31624184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 8776909 - 8776957
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| |||||||||||||  ||||||||||||    
T  8776909 tatgaagcacggacactcctcggattaggtgtgtctcggtgtcggacac 8776957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 269
Target Start/End: Complemental strand, 10645387 - 10645335
Alignment:
Q  217 gtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtca 269  Q
    |||| ||| |||||||||||||||| ||||||||||||||||||| |||||||    
T  10645387 gtcaaaagttgttttcataagttctcccaaacagtcttacaaaacttatgtca 10645335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 34595252 - 34595204
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| |||||||||||||| |||||| |||||    
T  34595252 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcagacac 34595204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 161 - 241
Target Start/End: Complemental strand, 35070708 - 35070628
Alignment:
Q  161 ttataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttct 241  Q
    ||||||||||| || |||||||||||||   ||||  ||||| |||| |||||| ||||||||||||||||| ||||||||    
T  35070708 ttataagctattttggagaacttatgaaaacaagcccaaaaaagcttgtgaaaattgtcataagctgttttcgtaagttct 35070628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 162 - 287
Target Start/End: Original strand, 2455004 - 2455126
Alignment:
Q  162 tataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaac 261  Q
    |||||| ||| || ||||||| |||||  |||||||||||  | ||||||| | |||||||||   |||||| ||||||| ||||||||||| |||||||    
T  2455004 tataagttatgttggagaactaatgaaaataagctgaaaacaggttatgaacaatgtcataag---ttttcagaagttctcccaaacagtctcacaaaac 2455100  T
Q  262 atatgtcagtggataagctctaataa 287  Q
     ||||| ||| |||||| || |||||    
T  2455101 ttatgttagtagataagttcaaataa 2455126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 129 - 199
Target Start/End: Complemental strand, 6909963 - 6909892
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaa 199  Q
    ||||||||||||||||| |||||||||| ||||| ||||  |||||| ||||| ||||||| ||||||||||    
T  6909963 ttaaattgtttttgtatatgctataagttgttttcataacatatcttggagaatttatgaaattaagctgaa 6909892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 129 - 243
Target Start/End: Original strand, 18076175 - 18076297
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatctt--aga-----gaacttatgaatttaagctgaaaaaggcttatgaaaagtgtca 220  Q
    ||||||||||||| || ||||||||||| ||||| ||||||||| ||  |||     |||||||||||| |||| ||||||  ||| ||||||| |||||    
T  18076175 ttaaattgtttttctaattgctataagttgtttttataagctatattgaagaactaagaacttatgaatataagttgaaaacagctcatgaaaattgtca 18076274  T
Q  221 taagctgttttcataagttcttc 243  Q
    ||||||| |||||||| ||||||    
T  18076275 taagctggtttcataaattcttc 18076297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 129 - 259
Target Start/End: Original strand, 24626274 - 24626397
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctg 227  Q
    ||||||||||||||||| | |||||||| ||||| |||||||||||| ||| | |||        |||||||||| | ||||||| || |||||||||||    
T  24626274 ttaaattgtttttgtatattctataagttgttttcataagctatcttggagtaatta--------agctgaaaaaagtttatgaagagcgtcataagctg 24626365  T
Q  228 ttttcataagttcttccaaacagtcttacaaa 259  Q
    |||||| ||||| | ||||||| ||| |||||    
T  24626366 ttttcaaaagttttcccaaacattctcacaaa 24626397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 288
Target Start/End: Complemental strand, 35069593 - 35069543
Alignment:
Q  238 ttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||||| |||||||||||||||| ||||||||| ||||||||| ||||||    
T  35069593 ttcttccgaacagtcttacaaaacttatgtcagtagataagctcaaataag 35069543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 218 - 259
Target Start/End: Complemental strand, 26559241 - 26559200
Alignment:
Q  218 tcataagctgttttcataagttcttccaaacagtcttacaaa 259  Q
    ||||||| |||||||||||||||||||||||||||| |||||    
T  26559241 tcataagttgttttcataagttcttccaaacagtctcacaaa 26559200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 33089572 - 33089645
Alignment:
Q  216 tgtcataagctgttttcataagttcttccaaacagtcttacaaa-acatatgtcagtggataagctctaataag 288  Q
    |||| |||||||||||||||||||||   ||| ||||| ||||| |||||||||||| ||||||||| ||||||    
T  33089572 tgtcctaagctgttttcataagttctctgaaatagtctcacaaatacatatgtcagtagataagctcaaataag 33089645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 211 - 271
Target Start/End: Complemental strand, 160971 - 160911
Alignment:
Q  211 aaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagt 271  Q
    |||| ||||||||||||||||| || ||||||||||| ||||| ||||||| |||| ||||    
T  160971 aaaattgtcataagctgttttcgtatgttcttccaaatagtctaacaaaacttatgccagt 160911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 280
Target Start/End: Original strand, 30536570 - 30536634
Alignment:
Q  216 tgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagct 280  Q
    ||||||||||| ||||||||||| || ||||||||||| ||||||| || | |||| ||||||||    
T  30536570 tgtcataagctattttcataagtcctcccaaacagtctcacaaaacttacgccagtagataagct 30536634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 176 - 288
Target Start/End: Complemental strand, 34910452 - 34910340
Alignment:
Q  176 gagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggat 275  Q
    |||||||||||||  ||||| |||||   || ||||| | ||||||||||||||||||||  |||||||||||| |||  ||||||  || ||||| |||    
T  34910452 gagaacttatgaaagtaagcggaaaacaactcatgaacaatgtcataagctgttttcatagtttcttccaaacaatctcccaaaactgatatcagtagat 34910353  T
Q  276 aagctctaataag 288  Q
    || ||| ||||||    
T  34910352 aaactcaaataag 34910340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 258
Target Start/End: Original strand, 769180 - 769246
Alignment:
Q  191 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaa 258  Q
    |||| ||||||  ||||||||| | ||||||||| ||||||||||||||| |||||||||||| ||||    
T  769180 taagttgaaaacagcttatgaaca-tgtcataagatgttttcataagttcatccaaacagtctcacaa 769246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Complemental strand, 4878060 - 4878014
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggaca 540  Q
    ||||||||||||||||||||| ||||||| ||||||| ||||||||||    
T  4878060 tatgaagcacggacactcctcggattaggcgtgtcct-gtgtcggaca 4878014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 544
Target Start/End: Complemental strand, 7248487 - 7248436
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacacatg 544  Q
    ||||||||||||||||||||| |||| |  |||||| |||||||||||||||    
T  7248487 tatgaagcacggacactcctcggatttgacgtgtcccggtgtcggacacatg 7248436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 544
Target Start/End: Complemental strand, 10294236 - 10294185
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacacatg 544  Q
    |||||||||| |||||||||| |||||| |||||||| || |||||||||||    
T  10294236 tatgaagcacagacactcctcagattagctgtgtcctagtttcggacacatg 10294185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 10339055 - 10339102
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggaca 540  Q
    ||||||||||||||||||||| ||||||| ||||||  ||||||||||    
T  10339055 tatgaagcacggacactcctccgattaggcgtgtcccagtgtcggaca 10339102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 544
Target Start/End: Original strand, 17841530 - 17841581
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacacatg 544  Q
    ||||||||||||||||||||| ||||||| |||||   ||||||||||||||    
T  17841530 tatgaagcacggacactcctcggattaggcgtgtctcagtgtcggacacatg 17841581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 191 - 266
Target Start/End: Complemental strand, 19411577 - 19411502
Alignment:
Q  191 taagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatg 266  Q
    ||||| |||||| |||||||| || ||||||||||||||| || ||||||| ||||||| || || ||||| ||||    
T  19411577 taagccgaaaaaagcttatgagaactgtcataagctgtttacaaaagttctcccaaacattcatataaaacttatg 19411502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 34894969 - 34895016
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggaca 540  Q
    |||||||||||||||||||||  |||||||||||||  ||||||||||    
T  34894969 tatgaagcacggacactcctcatattaggtgtgtccctgtgtcggaca 34895016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 495 - 541
Target Start/End: Original strand, 9025448 - 9025494
Alignment:
Q  495 tgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||| ||| ||||||| |||||| ||||||||||||    
T  9025448 tgaagcacggacacttctcggattaggcgtgtcccggtgtcggacac 9025494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 493 - 539
Target Start/End: Complemental strand, 16833426 - 16833380
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggac 539  Q
    ||||||| || |||||||||| |||| ||||||||||||||||||||    
T  16833426 tatgaagtacagacactcctcggattcggtgtgtcctggtgtcggac 16833380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 129 - 201
Target Start/End: Complemental strand, 837307 - 837234
Alignment:
Q  129 ttaaattgtttttgtatttgctataagtggtttt-ataagctatcttagagaacttatgaatttaagctgaaaa 201  Q
    |||||||||||| || |  ||||||||| ||||| || ||||||||| |||||||||||||  |||||||||||    
T  837307 ttaaattgttttggtgtaagctataagtagttttcattagctatcttggagaacttatgaaaataagctgaaaa 837234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 288
Target Start/End: Original strand, 31624324 - 31624399
Alignment:
Q  216 tgtcataagctgttttcataagttcttccaaacagtcttacaaaaca---tatgtcagtggataagctctaataag 288  Q
    |||||| |||||||||||||| |||| |||||||||||  |||||||   |||||||||  |||||||| ||||||    
T  31624324 tgtcatgagctgttttcataaattctaccaaacagtctctcaaaacagcttatgtcagtatataagctcaaataag 31624399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 7938218 - 7938170
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| ||| ||| |||||  ||||||||||||    
T  7938218 tatgaagcacggacactcctcggatcaggcgtgtctcggtgtcggacac 7938170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 8365449 - 8365497
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||| ||||||| ||||||| ||||||  |||||||||||    
T  8365449 tatgaagcacggagactcctcggattaggcgtgtcccagtgtcggacac 8365497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 557 - 589
Target Start/End: Original strand, 8805576 - 8805608
Alignment:
Q  557 acacagacacataattacactaaattatgtgat 589  Q
    |||| ||||||||||||||||||||||||||||    
T  8805576 acaccgacacataattacactaaattatgtgat 8805608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 16766826 - 16766778
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||| || || ||||||| |||||| ||||||||||||    
T  16766826 tatgaagcacggacattcttcggattaggcgtgtcccggtgtcggacac 16766778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 17327591 - 17327639
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| ||||||| ||||||  ||||| |||||    
T  17327591 tatgaagcacggacactcctcggattaggcgtgtccctgtgtcagacac 17327639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 28152216 - 28152168
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||| ||||||||| |||||||  ||||| ||||||||||||    
T  28152216 tatgaagcacgaacactcctcggattaggcctgtcccggtgtcggacac 28152168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 31385048 - 31385000
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||  ||||||| |||||| ||||| ||||||    
T  31385048 tatgaagcacggacactccttggattaggcgtgtcccggtgtaggacac 31385000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 258
Target Start/End: Original strand, 32976023 - 32976086
Alignment:
Q  194 gctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaa 258  Q
    ||||||||  ||||||| ||| |||||||||||||||  ||||| ||||||||||||||| ||||    
T  32976023 gctgaaaacagcttatggaaa-tgtcataagctgtttctataagctcttccaaacagtctcacaa 32976086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 216 - 288
Target Start/End: Complemental strand, 34404729 - 34404657
Alignment:
Q  216 tgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||||||| | |||||||||||||| ||||| | ||  ||||||| ||||||||| ||||| ||| ||||||    
T  34404729 tgtcataagatattttcataagttctcccaaagactcacacaaaacttatgtcagttgataaactcaaataag 34404657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 403 - 451
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||| |||||||||||||| ||||||||||||    
T  403 tatgaagcacggacactcctcggattaggtgtgtcccggtgtcggacac 451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 216 - 287
Target Start/End: Original strand, 24688 - 24759
Alignment:
Q  216 tgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataa 287  Q
    |||||||||||||||| ||||||||| ||||||||||| |||||||||||| || | |||| |||| |||||    
T  24688 tgtcataagctgttttgataagttctcccaaacagtctcacaaaacatatgccaatagatacgctcaaataa 24759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 231 - 288
Target Start/End: Original strand, 44115 - 44172
Alignment:
Q  231 tcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctctaataag 288  Q
    ||||||||||| ||||||||||| |||||||||||| |||| | || |||| ||||||    
T  44115 tcataagttctcccaaacagtctcacaaaacatatgccagtaggtacgctcaaataag 44172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 163 - 280
Target Start/End: Original strand, 22245 - 22362
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaaca 262  Q
    ||||||||| || || ||||||||||  |||||||||||| ||||| ||||| |||||||||||||||  ||||||| | |  ||||| || |||||||     
T  22245 ataagctatgttggaaaacttatgaaaataagctgaaaaaagcttacgaaaattgtcataagctgtttctataagttttccggaacaggctcacaaaact 22344  T
Q  263 tatgtcagtggataagct 280  Q
    |||| || | ||||||||    
T  22345 tatgccattagataagct 22362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 163 - 236
Target Start/End: Original strand, 58756 - 58829
Alignment:
Q  163 ataagctatcttagagaacttatgaatttaagctgaaaaaggcttatgaaaagtgtcataagctgttttcataa 236  Q
    ||||||||| ||  |||||||||||| ||||| ||||||| ||||||||||| |||||||| ||| ||||||||    
T  58756 ataagctatgttgaagaacttatgaaattaagttgaaaaaagcttatgaaaattgtcataaactgctttcataa 58829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 493 - 543
Target Start/End: Complemental strand, 32822 - 32772
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacacat 543  Q
    |||||||||| |||||||||| ||||| |||||||| ||||||||||||||    
T  32822 tatgaagcaccgacactcctcggattatgtgtgtcccggtgtcggacacat 32772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 135264 - 135312
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||| |||| |||| ||||||| |||||||||||||||||||    
T  135264 tatgaagcacgaacacgcctcagattaggcgtgtcctggtgtcggacac 135312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 492 - 540
Target Start/End: Complemental strand, 92941 - 92893
Alignment:
Q  492 atatgaagcacggacactcctctgattaggtgtgtcctggtgtcggaca 540  Q
    |||||||||||||||||||||| ||||||| |||||| |||||| ||||    
T  92941 atatgaagcacggacactcctcggattaggcgtgtccaggtgtccgaca 92893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Original strand, 236915 - 236963
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    |||||||||| |||||||||| |||||||||||||| |||||| |||||    
T  236915 tatgaagcacagacactcctcagattaggtgtgtcccggtgtcagacac 236963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 241723 - 241675
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||| ||| ||||||| |||||| ||||||||||||    
T  241723 tatgaagcacggacacttctcggattaggcgtgtcccggtgtcggacac 241675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 493 - 540
Target Start/End: Original strand, 4822 - 4869
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggaca 540  Q
    ||||||||||||||||||||| ||||||| ||||||  ||||||||||    
T  4822 tatgaagcacggacactcctcggattaggcgtgtccctgtgtcggaca 4869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0528 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0528
Description:

Target: scaffold0528; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 198 - 281
Target Start/End: Complemental strand, 1003 - 920
Alignment:
Q  198 aaaaaggcttatgaaaagtgtcataagctgttttcataagttcttccaaacagtcttacaaaacatatgtcagtggataagctc 281  Q
    ||||| ||||||||||| ||||||||||| |||| ||||||| | | ||||||| | ||||||| |||| | || |||||||||    
T  1003 aaaaaagcttatgaaaaatgtcataagctatttttataagttgtccaaaacagtatcacaaaacttatgccggtagataagctc 920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 538
Target Start/End: Complemental strand, 188512 - 188473
Alignment:
Q  499 gcacggacactcctctgattaggtgtgtcctggtgtcgga 538  Q
    ||||||||||||||| ||||||| ||||||||||||||||    
T  188512 gcacggacactcctcggattaggcgtgtcctggtgtcgga 188473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 494 - 541
Target Start/End: Original strand, 225199 - 225246
Alignment:
Q  494 atgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||||||||||  |||||| |||||||||||||| ||||    
T  225199 atgaagcacggacactcctcgaattaggcgtgtcctggtgtcgaacac 225246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 461 - 490
Target Start/End: Original strand, 17275 - 17304
Alignment:
Q  461 attttagttgattttaatagtttagggacc 490  Q
    ||||||||||||||||||||||||||||||    
T  17275 attttagttgattttaatagtttagggacc 17304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 535
Target Start/End: Complemental strand, 13523 - 13482
Alignment:
Q  494 atgaagcacggacactcctctgattaggtgtgtcctggtgtc 535  Q
    |||||||||||||||||||  ||||||||||||||| |||||    
T  13523 atgaagcacggacactccttggattaggtgtgtcctagtgtc 13482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 494 - 535
Target Start/End: Original strand, 21804 - 21845
Alignment:
Q  494 atgaagcacggacactcctctgattaggtgtgtcctggtgtc 535  Q
    |||||||||||||||||||  ||||||||||||||| |||||    
T  21804 atgaagcacggacactccttggattaggtgtgtcctagtgtc 21845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 8916 - 8868
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    ||||||||||||| ||||||| ||||||| |||||  ||||||||||||    
T  8916 tatgaagcacggagactcctcagattaggcgtgtctcggtgtcggacac 8868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 493 - 541
Target Start/End: Complemental strand, 71854 - 71806
Alignment:
Q  493 tatgaagcacggacactcctctgattaggtgtgtcctggtgtcggacac 541  Q
    |||||||||| |||||||||| ||||||  |||||| ||||||||||||    
T  71854 tatgaagcaccgacactcctcggattagtcgtgtcccggtgtcggacac 71806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University