View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14040_low_31 (Length: 292)

Name: NF14040_low_31
Description: NF14040
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14040_low_31
NF14040_low_31
[»] chr7 (63 HSPs)
chr7 (15-275)||(5116564-5116824)
chr7 (125-275)||(3904675-3904826)
chr7 (106-275)||(47673983-47674152)
chr7 (22-230)||(8359273-8359481)
chr7 (22-213)||(22328347-22328538)
chr7 (106-257)||(26417294-26417444)
chr7 (106-275)||(27347776-27347945)
chr7 (106-275)||(48491538-48491707)
chr7 (106-214)||(23565101-23565209)
chr7 (109-249)||(36574558-36574697)
chr7 (109-275)||(30024775-30024941)
chr7 (106-275)||(4586120-4586289)
chr7 (106-275)||(8153301-8153470)
chr7 (106-220)||(18396332-18396446)
chr7 (106-275)||(31733009-31733178)
chr7 (114-214)||(43363519-43363621)
chr7 (106-275)||(47676176-47676345)
chr7 (105-229)||(4508745-4508869)
chr7 (106-214)||(6431992-6432099)
chr7 (106-214)||(22269994-22270101)
chr7 (106-275)||(26639280-26639453)
chr7 (106-275)||(14069873-14070042)
chr7 (106-275)||(14379901-14380070)
chr7 (106-275)||(31105433-31105602)
chr7 (106-257)||(23555017-23555168)
chr7 (22-214)||(29608758-29608947)
chr7 (106-229)||(1113662-1113785)
chr7 (98-186)||(6359984-6360071)
chr7 (106-186)||(32358094-32358173)
chr7 (106-257)||(35853892-35854042)
chr7 (106-257)||(41317474-41317624)
chr7 (200-275)||(1360286-1360361)
chr7 (108-214)||(38671264-38671369)
chr7 (100-275)||(43864203-43864378)
chr7 (106-160)||(19502253-19502306)
chr7 (106-214)||(4253568-4253677)
chr7 (106-159)||(24525542-24525594)
chr7 (106-214)||(34310756-34310863)
chr7 (106-214)||(496023-496130)
chr7 (106-214)||(2361012-2361119)
chr7 (106-214)||(2390303-2390410)
chr7 (106-214)||(3259016-3259123)
chr7 (106-214)||(25615874-25615981)
chr7 (106-275)||(36146448-36146617)
chr7 (106-214)||(41649051-41649157)
chr7 (106-214)||(48489452-48489559)
chr7 (106-214)||(48599374-48599481)
chr7 (106-257)||(29991032-29991181)
chr7 (101-159)||(31518978-31519035)
chr7 (106-160)||(43504194-43504248)
chr7 (106-214)||(4510588-4510695)
chr7 (106-214)||(4512430-4512537)
chr7 (118-214)||(18126665-18126760)
chr7 (100-155)||(2759231-2759285)
chr7 (117-160)||(5513717-5513760)
chr7 (151-214)||(13065482-13065545)
chr7 (106-160)||(25767000-25767053)
chr7 (106-160)||(39731443-39731497)
chr7 (124-162)||(40808661-40808699)
chr7 (106-160)||(48408878-48408932)
chr7 (124-189)||(27073862-27073927)
chr7 (124-189)||(27204386-27204451)
chr7 (121-176)||(4178833-4178886)
[»] chr5 (52 HSPs)
chr5 (22-262)||(316735-316974)
chr5 (124-275)||(35616129-35616280)
chr5 (117-260)||(10054867-10055009)
chr5 (124-262)||(30802802-30802939)
chr5 (45-275)||(3325873-3326104)
chr5 (24-214)||(10700608-10700795)
chr5 (106-257)||(25412739-25412888)
chr5 (114-177)||(30793194-30793257)
chr5 (22-229)||(27637570-27637776)
chr5 (106-275)||(28278276-28278444)
chr5 (106-275)||(42426275-42426444)
chr5 (106-214)||(213486-213593)
chr5 (106-229)||(3075698-3075821)
chr5 (106-214)||(13488224-13488331)
chr5 (114-229)||(13695738-13695854)
chr5 (106-214)||(16452101-16452208)
chr5 (106-214)||(33831701-33831808)
chr5 (106-275)||(533728-533897)
chr5 (106-275)||(8565986-8566155)
chr5 (106-275)||(42428470-42428639)
chr5 (114-186)||(9049390-9049461)
chr5 (106-186)||(13239800-13239879)
chr5 (105-169)||(33906069-33906133)
chr5 (106-214)||(38747026-38747133)
chr5 (106-214)||(39468589-39468696)
chr5 (106-214)||(40147282-40147389)
chr5 (106-275)||(28750695-28750864)
chr5 (106-160)||(37439216-37439269)
chr5 (106-159)||(5058121-5058173)
chr5 (106-186)||(538074-538153)
chr5 (114-214)||(31182993-31183091)
chr5 (106-176)||(13343120-13343188)
chr5 (106-176)||(32636883-32636952)
chr5 (106-186)||(30682962-30683043)
chr5 (124-209)||(32609561-32609646)
chr5 (124-160)||(5007806-5007842)
chr5 (124-160)||(32583340-32583376)
chr5 (95-159)||(42926967-42927030)
chr5 (106-189)||(8445761-8445844)
chr5 (106-229)||(16409480-16409603)
chr5 (106-221)||(26177895-26178010)
chr5 (106-160)||(36074083-36074135)
chr5 (95-186)||(42309964-42310054)
chr5 (106-160)||(9789264-9789318)
chr5 (114-176)||(16137074-16137136)
chr5 (106-160)||(18441688-18441742)
chr5 (106-176)||(30182647-30182716)
chr5 (116-158)||(31992247-31992289)
chr5 (116-220)||(22097879-22097981)
chr5 (106-159)||(27015599-27015651)
chr5 (195-275)||(4160591-4160671)
chr5 (117-149)||(40293569-40293601)
[»] chr4 (75 HSPs)
chr4 (130-275)||(32091438-32091583)
chr4 (106-257)||(33089856-33090007)
chr4 (114-275)||(34112775-34112938)
chr4 (22-275)||(38811147-38811397)
chr4 (53-262)||(21703822-21704032)
chr4 (22-214)||(12073413-12073603)
chr4 (106-275)||(26175676-26175845)
chr4 (107-257)||(22882791-22882941)
chr4 (107-257)||(22934455-22934605)
chr4 (22-204)||(26699399-26699580)
chr4 (63-212)||(33989867-33990016)
chr4 (106-214)||(8665429-8665536)
chr4 (106-275)||(31474109-31474279)
chr4 (106-257)||(56178677-56178827)
chr4 (106-220)||(12119553-12119668)
chr4 (124-259)||(41961393-41961528)
chr4 (114-275)||(54199954-54200115)
chr4 (22-229)||(379385-379591)
chr4 (106-275)||(6542219-6542390)
chr4 (106-214)||(27417005-27417112)
chr4 (106-275)||(5429638-5429807)
chr4 (107-275)||(6677428-6677597)
chr4 (106-275)||(36994483-36994652)
chr4 (22-229)||(46703505-46703712)
chr4 (106-275)||(47038451-47038618)
chr4 (106-214)||(2209734-2209842)
chr4 (100-275)||(12745470-12745645)
chr4 (106-214)||(41964436-41964544)
chr4 (128-241)||(44570427-44570539)
chr4 (106-275)||(48143001-48143171)
chr4 (115-212)||(6199921-6200020)
chr4 (106-214)||(9927498-9927605)
chr4 (106-257)||(34570454-34570604)
chr4 (106-214)||(40632466-40632573)
chr4 (106-229)||(50673887-50674009)
chr4 (106-274)||(3913408-3913576)
chr4 (108-214)||(24969133-24969238)
chr4 (106-220)||(37740640-37740753)
chr4 (106-214)||(4587979-4588087)
chr4 (133-257)||(53345195-53345319)
chr4 (100-176)||(12744081-12744156)
chr4 (114-214)||(35662462-35662561)
chr4 (106-214)||(54883041-54883148)
chr4 (106-213)||(8648161-8648267)
chr4 (109-229)||(21688253-21688374)
chr4 (106-176)||(12743965-12744034)
chr4 (106-176)||(12745354-12745423)
chr4 (106-275)||(48893678-48893851)
chr4 (106-159)||(6656032-6656084)
chr4 (106-214)||(26364257-26364364)
chr4 (116-257)||(35369495-35369631)
chr4 (106-275)||(36463429-36463598)
chr4 (106-177)||(51337122-51337192)
chr4 (106-275)||(52095402-52095571)
chr4 (95-220)||(5207871-5207996)
chr4 (106-176)||(5370123-5370192)
chr4 (106-275)||(44967869-44968038)
chr4 (95-187)||(37754989-37755081)
chr4 (106-214)||(41639447-41639554)
chr4 (106-214)||(46147431-46147538)
chr4 (106-214)||(52467394-52467501)
chr4 (100-159)||(29254570-29254628)
chr4 (106-229)||(29999846-29999969)
chr4 (108-211)||(50262743-50262845)
chr4 (116-158)||(8832254-8832296)
chr4 (106-176)||(12739590-12739659)
chr4 (106-176)||(12747796-12747865)
chr4 (106-152)||(35370096-35370142)
chr4 (106-160)||(37229761-37229814)
chr4 (114-160)||(52065672-52065718)
chr4 (114-159)||(5349986-5350031)
chr4 (114-159)||(13009492-13009536)
chr4 (114-159)||(45687230-45687274)
chr4 (129-213)||(48142440-48142525)
chr4 (122-158)||(19222384-19222420)
[»] chr2 (44 HSPs)
chr2 (61-258)||(30218039-30218236)
chr2 (22-257)||(33648148-33648383)
chr2 (101-263)||(42261520-42261685)
chr2 (74-205)||(24398087-24398218)
chr2 (106-275)||(36318049-36318218)
chr2 (106-257)||(5723296-5723445)
chr2 (106-257)||(36988116-36988266)
chr2 (95-267)||(42019899-42020073)
chr2 (106-257)||(38312218-38312368)
chr2 (63-229)||(7815272-7815436)
chr2 (106-275)||(17057409-17057578)
chr2 (106-275)||(17085392-17085561)
chr2 (106-214)||(723784-723891)
chr2 (106-275)||(13121728-13121895)
chr2 (114-229)||(26353189-26353304)
chr2 (106-214)||(45726950-45727057)
chr2 (114-275)||(42362311-42362472)
chr2 (106-214)||(1631772-1631879)
chr2 (106-257)||(2334458-2334608)
chr2 (106-214)||(6595046-6595153)
chr2 (106-214)||(33162490-33162597)
chr2 (114-214)||(35446932-35447031)
chr2 (106-275)||(29867828-29867997)
chr2 (106-275)||(34139810-34139980)
chr2 (106-275)||(36773521-36773690)
chr2 (106-223)||(4484370-4484487)
chr2 (106-223)||(30833357-30833474)
chr2 (130-257)||(7597074-7597202)
chr2 (114-214)||(41446160-41446260)
chr2 (106-214)||(42288150-42288257)
chr2 (106-257)||(4503173-4503323)
chr2 (114-275)||(11151639-11151800)
chr2 (114-275)||(11690460-11690621)
chr2 (198-263)||(42261749-42261817)
chr2 (106-262)||(28671902-28672059)
chr2 (106-214)||(14633865-14633973)
chr2 (106-186)||(17490188-17490267)
chr2 (114-214)||(41454255-41454355)
chr2 (106-221)||(32289577-32289692)
chr2 (106-160)||(45099830-45099882)
chr2 (211-257)||(5868428-5868474)
chr2 (124-186)||(34811279-34811341)
chr2 (124-213)||(4561110-4561199)
chr2 (106-159)||(7451194-7451246)
[»] chr6 (32 HSPs)
chr6 (106-268)||(25073535-25073697)
chr6 (22-229)||(5043632-5043838)
chr6 (114-257)||(4045401-4045544)
chr6 (106-275)||(9183071-9183240)
chr6 (106-214)||(3808748-3808856)
chr6 (106-214)||(2972979-2973086)
chr6 (106-214)||(21588952-21589059)
chr6 (106-214)||(21593685-21593792)
chr6 (106-257)||(5406240-5406389)
chr6 (106-257)||(5410565-5410714)
chr6 (106-257)||(5413434-5413583)
chr6 (107-214)||(17758044-17758150)
chr6 (106-214)||(26830163-26830270)
chr6 (106-275)||(28137448-28137617)
chr6 (106-229)||(31404715-31404837)
chr6 (106-160)||(5409109-5409162)
chr6 (106-229)||(17762995-17763118)
chr6 (106-210)||(26954326-26954429)
chr6 (106-160)||(3072799-3072853)
chr6 (124-186)||(5740055-5740117)
chr6 (106-176)||(30834576-30834645)
chr6 (106-160)||(33160392-33160445)
chr6 (106-159)||(2171572-2171624)
chr6 (22-214)||(22424783-22424974)
chr6 (22-161)||(26800662-26800798)
chr6 (106-186)||(603128-603207)
chr6 (106-214)||(3038943-3039050)
chr6 (118-221)||(12221155-12221258)
chr6 (107-160)||(2908533-2908586)
chr6 (106-143)||(16569113-16569150)
chr6 (106-159)||(33211225-33211277)
chr6 (106-158)||(9572667-9572719)
[»] scaffold0219 (1 HSPs)
scaffold0219 (53-275)||(27428-27652)
[»] chr8 (57 HSPs)
chr8 (106-262)||(32902213-32902369)
chr8 (55-256)||(7597592-7597795)
chr8 (106-262)||(11712040-11712197)
chr8 (130-275)||(3231859-3232005)
chr8 (106-214)||(40328800-40328908)
chr8 (50-268)||(29796304-29796524)
chr8 (106-275)||(8965731-8965900)
chr8 (106-214)||(30143361-30143468)
chr8 (106-214)||(40221766-40221873)
chr8 (114-275)||(4731617-4731778)
chr8 (106-275)||(18141780-18141948)
chr8 (106-275)||(27811237-27811406)
chr8 (106-257)||(34254371-34254520)
chr8 (106-275)||(43036382-43036551)
chr8 (95-268)||(19491728-19491900)
chr8 (106-257)||(42498171-42498322)
chr8 (126-249)||(10240139-10240263)
chr8 (124-268)||(41266935-41267080)
chr8 (106-229)||(1292503-1292626)
chr8 (106-257)||(3303710-3303860)
chr8 (106-229)||(18655405-18655528)
chr8 (106-257)||(33352128-33352278)
chr8 (106-214)||(42435031-42435138)
chr8 (107-214)||(4283545-4283651)
chr8 (106-275)||(15212745-15212914)
chr8 (106-257)||(34256547-34256696)
chr8 (106-220)||(12702674-12702787)
chr8 (127-262)||(40585686-40585822)
chr8 (106-213)||(1822313-1822421)
chr8 (106-213)||(1856758-1856866)
chr8 (106-257)||(40321058-40321208)
chr8 (106-176)||(5689330-5689399)
chr8 (179-257)||(7444930-7445008)
chr8 (106-257)||(30291584-30291735)
chr8 (106-214)||(1345411-1345518)
chr8 (106-229)||(41366654-41366777)
chr8 (106-275)||(44353752-44353921)
chr8 (106-176)||(1746259-1746327)
chr8 (106-176)||(17982712-17982781)
chr8 (106-176)||(44303914-44303983)
chr8 (117-214)||(11384006-11384102)
chr8 (106-214)||(4162518-4162624)
chr8 (116-176)||(9765804-9765863)
chr8 (114-214)||(30909389-30909487)
chr8 (124-262)||(33655361-33655499)
chr8 (105-160)||(8153833-8153887)
chr8 (106-141)||(10015173-10015208)
chr8 (106-213)||(10930239-10930345)
chr8 (106-176)||(19945399-19945469)
chr8 (106-160)||(3073913-3073966)
chr8 (108-158)||(10929865-10929914)
chr8 (117-186)||(11137074-11137146)
chr8 (106-176)||(31218316-31218385)
chr8 (106-143)||(4743254-4743291)
chr8 (106-214)||(6598993-6599100)
chr8 (106-214)||(6674446-6674553)
chr8 (122-158)||(40873729-40873765)
[»] chr3 (62 HSPs)
chr3 (106-257)||(40735361-40735511)
chr3 (126-275)||(35138765-35138915)
chr3 (117-275)||(26323124-26323283)
chr3 (106-275)||(44700518-44700687)
chr3 (124-275)||(8166514-8166667)
chr3 (106-259)||(33191807-33191959)
chr3 (108-275)||(46860432-46860600)
chr3 (124-262)||(2020121-2020250)
chr3 (106-212)||(54593727-54593832)
chr3 (22-262)||(20937629-20937868)
chr3 (106-229)||(7762270-7762393)
chr3 (106-214)||(30236146-30236253)
chr3 (106-275)||(40734457-40734626)
chr3 (114-213)||(25491015-25491114)
chr3 (106-257)||(45095142-45095291)
chr3 (114-275)||(1313852-1314014)
chr3 (106-214)||(49199509-49199617)
chr3 (106-229)||(6095639-6095762)
chr3 (106-214)||(22835042-22835149)
chr3 (106-214)||(34491233-34491340)
chr3 (106-214)||(46173378-46173485)
chr3 (106-221)||(7764478-7764592)
chr3 (106-275)||(29682318-29682487)
chr3 (106-275)||(44331504-44331673)
chr3 (88-261)||(1683450-1683620)
chr3 (106-275)||(9581242-9581410)
chr3 (106-176)||(19683929-19683998)
chr3 (108-275)||(5236498-5236665)
chr3 (106-223)||(9636166-9636282)
chr3 (106-229)||(32891108-32891232)
chr3 (106-214)||(43401841-43401949)
chr3 (117-229)||(54739004-54739116)
chr3 (22-159)||(55301929-55302064)
chr3 (106-214)||(760868-760975)
chr3 (106-275)||(29196426-29196596)
chr3 (106-186)||(29810917-29810996)
chr3 (114-275)||(31314404-31314565)
chr3 (106-176)||(23197979-23198048)
chr3 (106-176)||(23200178-23200247)
chr3 (106-216)||(23391949-23392058)
chr3 (124-214)||(24635278-24635368)
chr3 (106-176)||(37408517-37408586)
chr3 (106-159)||(4570028-4570080)
chr3 (106-214)||(43403784-43403892)
chr3 (106-214)||(29813084-29813191)
chr3 (127-187)||(40519258-40519317)
chr3 (106-229)||(47304256-47304379)
chr3 (114-257)||(3148038-3148181)
chr3 (105-176)||(5258183-5258253)
chr3 (105-176)||(5260362-5260432)
chr3 (115-220)||(5373247-5373353)
chr3 (106-211)||(36018876-36018980)
chr3 (114-246)||(4055811-4055943)
chr3 (106-155)||(16499109-16499157)
chr3 (106-159)||(40913369-40913421)
chr3 (114-159)||(51398890-51398934)
chr3 (106-214)||(53921543-53921650)
chr3 (106-229)||(7780044-7780166)
chr3 (116-160)||(801166-801210)
chr3 (106-162)||(41819563-41819617)
chr3 (146-261)||(50432733-50432849)
chr3 (121-176)||(54744304-54744357)
[»] scaffold0002 (3 HSPs)
scaffold0002 (101-263)||(490355-490520)
scaffold0002 (106-176)||(434592-434661)
scaffold0002 (198-263)||(490584-490652)
[»] chr1 (71 HSPs)
chr1 (22-262)||(12318480-12318718)
chr1 (114-244)||(22079307-22079437)
chr1 (105-258)||(9109458-9109611)
chr1 (106-275)||(49918309-49918478)
chr1 (19-275)||(41135780-41136033)
chr1 (106-257)||(3156843-3156993)
chr1 (106-229)||(19754499-19754623)
chr1 (114-275)||(4535528-4535688)
chr1 (106-214)||(7482270-7482378)
chr1 (74-214)||(37033080-37033220)
chr1 (106-257)||(4552677-4552827)
chr1 (98-214)||(19752707-19752822)
chr1 (105-275)||(44650201-44650372)
chr1 (106-214)||(47255380-47255487)
chr1 (105-208)||(6808479-6808582)
chr1 (106-275)||(8550827-8550996)
chr1 (106-275)||(28265594-28265763)
chr1 (95-268)||(41360881-41361053)
chr1 (105-229)||(193616-193740)
chr1 (106-214)||(37168318-37168426)
chr1 (105-220)||(3460710-3460826)
chr1 (106-214)||(11348719-11348826)
chr1 (106-214)||(13547129-13547236)
chr1 (106-214)||(28220266-28220373)
chr1 (106-186)||(37282731-37282811)
chr1 (124-246)||(16914232-16914355)
chr1 (106-275)||(31659197-31659366)
chr1 (106-275)||(44455119-44455288)
chr1 (22-214)||(47115192-47115383)
chr1 (106-275)||(50167215-50167384)
chr1 (124-262)||(1050501-1050639)
chr1 (96-186)||(16455670-16455759)
chr1 (106-257)||(20762649-20762800)
chr1 (100-275)||(3847155-3847330)
chr1 (106-210)||(15820332-15820435)
chr1 (124-257)||(25652064-25652197)
chr1 (106-275)||(37503597-37503763)
chr1 (106-214)||(13549040-13549147)
chr1 (106-186)||(28223461-28223540)
chr1 (106-186)||(30476486-30476565)
chr1 (106-186)||(31925747-31925826)
chr1 (106-275)||(37559908-37560078)
chr1 (106-275)||(1833481-1833650)
chr1 (106-185)||(5459956-5460034)
chr1 (108-186)||(2263016-2263094)
chr1 (22-158)||(28242382-28242515)
chr1 (114-246)||(13938126-13938258)
chr1 (106-214)||(23555305-23555412)
chr1 (106-214)||(29136268-29136375)
chr1 (106-214)||(42298015-42298122)
chr1 (114-275)||(196956-197117)
chr1 (114-213)||(834215-834313)
chr1 (105-176)||(2926567-2926638)
chr1 (106-213)||(13659376-13659482)
chr1 (106-160)||(3189405-3189458)
chr1 (106-160)||(3198222-3198275)
chr1 (106-160)||(3207061-3207114)
chr1 (106-275)||(10925182-10925354)
chr1 (106-176)||(13316392-13316461)
chr1 (106-214)||(34603597-34603705)
chr1 (114-159)||(45644402-45644446)
chr1 (106-210)||(46064943-46065046)
chr1 (115-213)||(928025-928123)
chr1 (106-275)||(13138016-13138183)
chr1 (118-156)||(31065713-31065751)
chr1 (116-210)||(32471486-32471579)
chr1 (106-160)||(51765471-51765525)
chr1 (201-250)||(6398631-6398680)
chr1 (106-159)||(37876806-37876858)
chr1 (106-159)||(50169250-50169302)
chr1 (116-156)||(6398724-6398764)
[»] scaffold0053 (1 HSPs)
scaffold0053 (114-275)||(25012-25174)
[»] scaffold0236 (1 HSPs)
scaffold0236 (106-176)||(10548-10617)
[»] scaffold0466 (1 HSPs)
scaffold0466 (106-214)||(7348-7455)
[»] scaffold0016 (1 HSPs)
scaffold0016 (106-160)||(114677-114730)
[»] scaffold0176 (1 HSPs)
scaffold0176 (106-214)||(18044-18150)
[»] scaffold0066 (1 HSPs)
scaffold0066 (106-229)||(20455-20578)
[»] scaffold0006 (1 HSPs)
scaffold0006 (106-213)||(149137-149243)
[»] scaffold0491 (2 HSPs)
scaffold0491 (106-223)||(11201-11318)
scaffold0491 (106-176)||(8775-8845)
[»] scaffold0286 (1 HSPs)
scaffold0286 (106-159)||(11633-11685)
[»] scaffold1519 (1 HSPs)
scaffold1519 (106-176)||(975-1043)
[»] scaffold0014 (1 HSPs)
scaffold0014 (121-214)||(80338-80430)


Alignment Details
Target: chr7 (Bit Score: 197; Significance: 1e-107; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 15 - 275
Target Start/End: Complemental strand, 5116824 - 5116564
Alignment:
Q  15 atataataacaagataaagagggtggagaaaagagaacaacacatcaaaaatatttactcagttcagtccaataatgatttactatgggaaagagattta 114  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| |  |||||||||| |||||||| |||||||  |||||||||    
T  5116824 atataataacaagataaagagggtagagaaaagagaacagcacatcaaaaatatttaccctattcagtccaacaatgatttgctatgggggagagattta 5116725  T
Q  115 tctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctac 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||  ||||||||||||||||||||    
T  5116724 tctctccaattcactatcaatgagttctttacaaagagatacaaaaggtttacaataaattatcttcaacaaactatccaagaacaaacctaatttctac 5116625  T
Q  215 tcttttctcaatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttt 275  Q
    |||||||  ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  5116624 tcttttcctaatctcctcccataaacaagagactcaatgatttcacccgcccaatgtgttt 5116564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 125 - 275
Target Start/End: Original strand, 3904675 - 3904826
Alignment:
Q  125 tcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cctaatttctactcttttctc 223  Q
    |||||||||||||||||||||||||||||| |||||   |||||| ||||||  ||||| |  || ||| |||||||| ||||||||||||  ||||| |    
T  3904675 tcactatcaatgagttctttacaaagagatgcaaaagtgttacaagaaattacattcaataggctctcaaagaacaaaacctaatttctaccattttccc 3904774  T
Q  224 aatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttt 275  Q
    |||||| ||| |  ||||||||||||||||||||||||||||||| ||||||    
T  3904775 aatctcttcctaagaacaagagactcaatgatttcactcgcccaaggtgttt 3904826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 47673983 - 47674152
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  47673983 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccct 47674081  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | |||||||||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  47674082 aatttctacccattttctcaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 47674152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 230
Target Start/End: Original strand, 8359273 - 8359481
Alignment:
Q  22 aacaagataaagagggtggagaaaagagaacaacacatcaa-aaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctc 120  Q
    |||||||||| ||| || ||||||||| ||||||||  ||| |||| || || |||||| |||||| |||||  |||| |||   ||||||| |||||||    
T  8359273 aacaagataatgagagtagagaaaagataacaacac--caagaaatgttcacccagttcggtccaacaatgacctactctggaggagagattgatctctc 8359370  T
Q  121 caattcactatcaatgagttctttacaaagagatacaaaat-gtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactc-tt 218  Q
    |||| |||||||||||||||| ||||||||||||||||||| | |||||| |||||| ||| ||||| ||  || |||| || |||||||||||| | ||    
T  8359371 caatccactatcaatgagttc-ttacaaagagatacaaaatgggttacaagaaattagtttaaacaagctcacaaagaaaaaccctaatttctacccatt 8359469  T
Q  219 ttctcaatctcc 230  Q
    ||| ||||||||    
T  8359470 ttcccaatctcc 8359481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 22 - 213
Target Start/End: Original strand, 22328347 - 22328538
Alignment:
Q  22 aacaagataaagagggtggagaaaagagaacaacacatcaaaaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctcc 121  Q
    |||||||||||||| || ||||||||| ||||||||   |||||||||||| |||||| |||||| |||||  |||| | ||  ||||||| |||||||     
T  22328347 aacaagataaagagagtagagaaaagataacaacacca-aaaaatatttacccagttcggtccaacaatgacctactctaggggagagattgatctctca 22328445  T
Q  122 aattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaac-ctaatttcta 213  Q
    ||| |||||| ||||| ||| || |||||||||||||||   |||||| ||||||  |||||||| ||  || ||||||||| ||||||||||    
T  22328446 aatccactattaatgacttccttgcaaagagatacaaaagagttacaagaaattagcttcaacaagctcacaaagaacaaactctaatttcta 22328538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 106 - 257
Target Start/End: Complemental strand, 26417444 - 26417294
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| ||||||||| |||||||| |||||||||||||||  | |||||| ||||||| |||||||| ||  || ||||||| |||    
T  26417444 agagattgatctctccaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattatcttcaacaagctcacaaagaacaaccct 26417346  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||||||    
T  26417345 aatttctacccattttcccaatct-caccaatgaacaagacactcaatgattt 26417294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 27347945 - 27347776
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| |||||| |||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  27347945 agagattgatctctgcaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaatcct 27347847  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||||||||||    
T  27347846 aatttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaatgtgttt 27347776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 48491707 - 48491538
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  48491707 agagattgatctctccaatccactatcaatgagttcttt-caaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccct 48491609  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  48491608 aatttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaagtgttt 48491538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 23565101 - 23565209
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaa-acc 204  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||   |||||| |||||| ||||||||| ||  || ||||||| |||    
T  23565101 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagagttacaagaaattagtttcaacaagctcacaaagaacaagacc 23565199  T
Q  205 taatttctac 214  Q
    ||||||||||    
T  23565200 taatttctac 23565209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 249
Target Start/End: Original strand, 36574558 - 36574697
Alignment:
Q  109 gatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cctaa 207  Q
    |||| ||||||||||  |||||||||||||||||||||||||||||| |||| | |||||| ||||||  |||||||||||  || |||||||| | |||    
T  36574558 gattgatctctccaaaccactatcaatgagttctttacaaagagatataaaagggttacaagaaattagcttcaacaaactcacaaagaacaaatcttaa 36574657  T
Q  208 tttctactcttttctcaatctcctcccataaacaagagactc 249  Q
    ||||||| |||| | |||||| |||| |||||||||| ||||    
T  36574658 tttctac-ctttccccaatct-ctccaataaacaagacactc 36574697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 109 - 275
Target Start/End: Original strand, 30024775 - 30024941
Alignment:
Q  109 gatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaat 208  Q
    |||| ||||||||||| ||||||||| |||||||| |||||||||||||||  | |||||| ||||||  |||||||| ||  ||  |||||| ||||||    
T  30024775 gattgatctctccaatccactatcaaagagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaacaaccctaat 30024873  T
Q  209 ttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    |||||| | |||||||||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  30024874 ttctacccattttctcaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 30024941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 4586289 - 4586120
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||| |||  | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  4586289 agagattgatctctccaatccactatcaatgagttc-ttacaaagagataaaaatgggttacaaaaaattagcttcaacaagttcacaaagaacaaccct 4586191  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt-cactcgcccaatgtgttt 275  Q
    ||||||||| | ||||| |||||| | || || ||||||| |||||||||||| ||||| ||||| ||||||    
T  4586190 aatttctacccattttcccaatct-caccaatgaacaagacactcaatgatttacactcacccaaggtgttt 4586120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 8153470 - 8153301
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||  |||||||||||||||||    |||||| ||||||  ||  |||| ||  || ||||||| |||    
T  8153470 agagattgatctctccaatccactatcaatgagtt-attacaaagagatacaaatgagttacaagaaattagctttgacaatctcacaaagaacaaccct 8153372  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||||| ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||||||||||    
T  8153371 aatttctactcattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaatgtgttt 8153301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 220
Target Start/End: Complemental strand, 18396446 - 18396332
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaac-aaacc 204  Q
    ||||||| ||||||||||| | |||||||||| ||||||| |||||||||||||||| |||||| ||| ||  ||||||||||| ||  ||||| |||||    
T  18396446 agagattgatctctccaatcctctatcaatgaattctttataaagagatacaaaatg-ttacaaaaaaataggttcaacaaactctccaagaacaaaacc 18396348  T
Q  205 taatttctactctttt 220  Q
    ||||||||||| ||||    
T  18396347 taatttctactttttt 18396332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 31733009 - 31733178
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| || ||||||||||||| |||||||||||||||||  | |||||| ||||||  |||| ||| ||  || ||||||| |||    
T  31733009 agagattgatctctccaatccagtatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaccaagctcacaaagaacaaccct 31733107  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | |||||||| ||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  31733108 aatttctacccattttctcagtct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 31733178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 214
Target Start/End: Original strand, 43363519 - 43363621
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaa--gagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttc 211  Q
    |||| |||| ||||||||||||||||| ||||||||  |||||||||||   ||||||||||||| ||||||||| || ||  |||||||||||||||||    
T  43363519 atctatccacttcactatcaatgagttatttacaaatagagatacaaaagagttacaataaattagtttcaacaagctctccaagaacaaacctaatttc 43363618  T
Q  212 tac 214  Q
    |||    
T  43363619 tac 43363621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 47676176 - 47676345
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||| | |||||||| ||||||||| |||||||||||||||  | |||||| ||||||  ||||||||| |  || ||||||| |||    
T  47676176 agagattgatctctccattccactatcattgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaaattcacaaagaacaaccct 47676274  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | |||||||||||| | || || ||||||| ||||| ||| |||||||| ||||| ||||||    
T  47676275 aatttctacccattttctcaatct-caccaatgaacaagacactcattgattttcactcacccaaggtgttt 47676345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 4508745 - 4508869
Alignment:
Q  105 aagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacc 204  Q
    |||||||| ||||||||||| |||| ||||||||||| |||||||||||||||||  | |||||| ||||||  ||||| || ||  || ||||||| ||    
T  4508745 aagagattgatctctccaatccactctcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaataagctcacaaagaacaaccc 4508843  T
Q  205 taatttctactc-ttttctcaatctc 229  Q
    |||||||||||| ||||| |||||||    
T  4508844 taatttctactcattttcccaatctc 4508869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 6432099 - 6431992
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| ||||||||| |||||||| |||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  6432099 agagattgatctctccaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaatcct 6432001  T
Q  206 aatttctac 214  Q
    |||||||||    
T  6432000 aatttctac 6431992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 22270101 - 22269994
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||| ||||||| |||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  22270101 agagattgatctctccaatccactatcaatcagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccct 22270003  T
Q  206 aatttctac 214  Q
    |||||||||    
T  22270002 aatttctac 22269994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 26639453 - 26639280
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagata----caaaatgtttacaataaattattttcaacaaactatcatagaacaa 201  Q
    ||||||| ||||||| ||| || |||||| ||||| ||||||| || |||    ||||| | |||||| ||||||   |||||||||| ||  ||||||     
T  26639453 agagattgatctctctaatccattatcaaagagttatttacaatgatatatatacaaaagggttacaagaaattaacatcaacaaactctccaagaacat 26639354  T
Q  202 acctaatttctactcttttctcaatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttt 275  Q
    |||||||||||||  ||||| ||||||| ||||| ||| ||||||||||||||||| |||| || || ||||||    
T  26639353 acctaatttctaccattttcacaatctcttcccaaaaagaagagactcaatgattttactcacctaaagtgttt 26639280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 14069873 - 14070042
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  14069873 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaaccct 14069971  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  14069972 aatttctaccctttttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 14070042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 14379901 - 14380070
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  14379901 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaaccct 14379999  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  14380000 aatttctaccctttttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 14380070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 31105433 - 31105602
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||||||||||||||| ||| |||||||||||| ||||||| |||||||||  | |||||| ||||||  |||||||| ||  || |||| ||| ||    
T  31105433 agagatttatctctccaatccaccatcaatgagttc-ttacaaaaagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaaaaaatct 31105531  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | ||||| |||||| | |  || ||||||| ||||||||| |||||||| ||||| ||||||    
T  31105532 aatttctacccattttcccaatct-cacaaatgaacaagacactcaatgattttcactcacccaaggtgttt 31105602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 257
Target Start/End: Complemental strand, 23555168 - 23555017
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||| |||||||   |||||| ||||||  ||||||||  |  || ||||||| |||    
T  23555168 agagattgatctctccaatccactatcaatgagttc-ttacaaagaggtacaaaagtgttacaagaaattagcttcaacaagttcacaaagaacaaccct 23555070  T
Q  206 aatttctac--tcttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    |||||||||  | ||||| |||||| | || || ||||||| ||||||||||||    
T  23555069 aatttctaccattttttcccaatct-caccaatgaacaagacactcaatgattt 23555017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 22 - 214
Target Start/End: Complemental strand, 29608947 - 29608758
Alignment:
Q  22 aacaagataaagagggtggagaaaagagaacaacacatcaa-aaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctc 120  Q
    |||||||||||||| || ||||||||| ||||||||  ||| ||||||| ||||||||| ||||||   |||  |||| |||   || |||| || ||||    
T  29608947 aacaagataaagagagtagagaaaagataacaacac--caagaaatattcactcagttcggtccaact-tgacctactctggaggagtgattgatatctc 29608851  T
Q  121 caattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctac 214  Q
    |||| |||||||||||||||| |||||||||||||||||    |||||| ||||||  |||||||| ||  || ||||||| ||||||||||||    
T  29608850 caatccactatcaatgagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccctaatttctac 29608758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 229
Target Start/End: Complemental strand, 1113785 - 1113662
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| |||||||||||  ||||||||||||||| |||||||||||||||||  | ||| || ||||||  |||||||| ||  || ||||||| |||    
T  1113785 agagattgatctctccaatctactatcaatgagttc-ttacaaagagatacaaatgggttataagaaattagcttcaacaagctcacaaagaacaaccct 1113687  T
Q  206 aatttcta-ctcttttctcaatctc 229  Q
    |||||||| |  |||||||||||||    
T  1113686 aatttctatccattttctcaatctc 1113662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 98 - 186
Target Start/End: Original strand, 6359984 - 6360071
Alignment:
Q  98 tatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 186  Q
    |||||| |||||||| |||||||||||  ||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||    
T  6359984 tatggggaagagattgatctctccaatcaactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaa 6360071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 32358094 - 32358173
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 186  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||    
T  32358094 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaa 32358173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 257
Target Start/End: Complemental strand, 35854042 - 35853892
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| | ||||||||| |||||||||||||||| |||||||||||||||||| | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  35854042 agagattgaactctccaatccactatcaatgagttc-ttacaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccct 35853944  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||||||    
T  35853943 aatttctaccctttttcccaatct-caccaatgaacaagacactcaatgattt 35853892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 257
Target Start/End: Original strand, 41317474 - 41317624
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||| ||||||||  | |||||| ||||||  ||  |||| ||  || ||||||| |||    
T  41317474 agagattgatctctccaatccactatcaatgagttctt-acaaagggatacaaatggattacaagaaattagctttgacaagctcacaaagaacaaccct 41317572  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    |||||||||   ||||| |||||||  || || ||||||||||||||||||||    
T  41317573 aatttctaccaattttcccaatctca-ccaatgaacaagagactcaatgattt 41317624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 200 - 275
Target Start/End: Original strand, 1360286 - 1360361
Alignment:
Q  200 aaacctaatttctactcttttctcaatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttt 275  Q
    |||||||||||||||  ||||| ||||||| | |||| ||||||||||||||||||||||||| || || ||||||    
T  1360286 aaacctaatttctacctttttcccaatctcattccatgaacaagagactcaatgatttcactcaccaaaggtgttt 1360361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 214
Target Start/End: Original strand, 38671264 - 38671369
Alignment:
Q  108 agatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgt-ttacaataaattattttcaacaaactatcatagaacaaaccta 206  Q
    |||||||||||| |||| |||||||||||||||| |||||||| ||||| |||||| |||||||||||||  || ||||| ||  || ||||||| ||||    
T  38671264 agatttatctcttcaatccactatcaatgagttc-ttacaaagtgatac-aaatgtgttacaataaattagcttaaacaagctcacaaagaacaacccta 38671361  T
Q  207 atttctac 214  Q
    ||||||||    
T  38671362 atttctac 38671369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 100 - 275
Target Start/End: Complemental strand, 43864378 - 43864203
Alignment:
Q  100 tgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaac 199  Q
    ||||| ||||||| ||||||||||| |||||||||| |||| ||||||||||||||||||  | |||||  ||||||  ||||||||  |  || |||||    
T  43864378 tgggagagagattgatctctccaatccactatcaattagtt-tttacaaagagatacaaatgggttacaggaaattagcttcaacaagttcacaaagaac 43864280  T
Q  200 aaacctaatttcta--ctcttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    || |||||||||||  | |||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  43864279 aaccctaatttctacccacttttc-caatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 43864203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 19502306 - 19502253
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 160  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  19502306 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaa 19502253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 4253568 - 4253677
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cc 204  Q
    ||||||| ||||||| ||| || |||||||||||||||| |||||||||| |||| | |||||  ||||||  |||||||| ||  || |||||||| ||    
T  4253568 agagattgatctctctaatccattatcaatgagttctttccaaagagatataaaagggttacatgaaattagcttcaacaagctcacaaagaacaaaccc 4253667  T
Q  205 taatttctac 214  Q
    ||||||||||    
T  4253668 taatttctac 4253677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 24525542 - 24525594
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 159  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||    
T  24525542 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaa 24525594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 34310756 - 34310863
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgt-ttacaataaattattttcaacaaactatcatagaacaaacc 204  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||| |||||| |||||| |||||| ||||||  ||||||||  |  || ||||||| ||    
T  34310756 agagattgatctctccaatccactatcaatgagttc-ttacaaaaagatac-aaatgtgttacaagaaattagcttcaacaatttcacaaagaacaaccc 34310853  T
Q  205 taatttctac 214  Q
    ||||||||||    
T  34310854 taatttctac 34310863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 496023 - 496130
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| ||| |||||||||||||  | || ||| ||||||  |||||||| ||  || ||||| | |||    
T  496023 agagattgatctctccaatccactatcaatgagttc-ttataaagagatacaaatgggttgcaagaaattagcttcaacaagctcacaaagaactaccct 496121  T
Q  206 aatttctac 214  Q
    |||||||||    
T  496122 aatttctac 496130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 2361012 - 2361119
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| || |||| ||| |||||||||||||||| |||||||||||||||||    |||||| ||||||  |||||||| ||  || ||||||| |||    
T  2361012 agagattgatatctcaaatccactatcaatgagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccct 2361110  T
Q  206 aatttctac 214  Q
    |||||||||    
T  2361111 aatttctac 2361119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 2390410 - 2390303
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| ||||||  ||||||| || |||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  2390410 agagattgatctctccaatccactatatatgagttatt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccct 2390312  T
Q  206 aatttctac 214  Q
    |||||||||    
T  2390311 aatttctac 2390303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 3259123 - 3259016
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| ||||||||||| ||| ||||||||||||||||||    |||||||||||||  || ||||| ||  || ||||||| |||    
T  3259123 agagattgatctctccaatccactatcaatgggtt-tttacaaagagatacaaatgagttacaataaattagcttaaacaagctcacaaagaacaaccct 3259025  T
Q  206 aatttctac 214  Q
    | |||||||    
T  3259024 agtttctac 3259016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 25615981 - 25615874
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||| ||| |||||||||||||||| |||||||  ||||||||  | |||||| ||||||  || ||||| |   ||||||||||||||    
T  25615981 agagattgatctctctaatccactatcaatgagttc-ttacaaaatgatacaaatgggttacaagaaattagcttaaacaagcgcacatagaacaaacct 25615883  T
Q  206 aatttctac 214  Q
    |||||||||    
T  25615882 aatttctac 25615874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 36146448 - 36146617
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaac-c 204  Q
    ||||||| ||||||| ||| |||||||||||||||| |||||||||||||||||  | |||| | ||||||  |||||||| ||  || | ||||||| |    
T  36146448 agagattgatctctcaaatccactatcaatgagttc-ttacaaagagatacaaatgggttac-agaaattagcttcaacaagctcacaaataacaaactc 36146545  T
Q  205 taatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    |||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  36146546 taatttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 36146617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 41649051 - 41649157
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||| ||||||||  | |||||| ||||||   | ||||| ||  || |||||||||||    
T  41649051 agagattgatctctccaatccactatcaatgagttc-ttacaaagggatacaaatgggttacaagaaatta-gctaaacaagctcacaaagaacaaacct 41649148  T
Q  206 aatttctac 214  Q
    |||||||||    
T  41649149 aatttctac 41649157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 48489559 - 48489452
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||| |||||||| ||  ||||||||||||||  | |||||| ||||||  ||||||||  | ||| ||||||| |||    
T  48489559 agagattgatctctccaatccactatgaatgagttattg-caaagagatacaaatgggttacaagaaattagcttcaacaagttttcaaagaacaaccct 48489461  T
Q  206 aatttctac 214  Q
    |||||||||    
T  48489460 aatttctac 48489452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 48599374 - 48599481
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| ||||||||||||| || || ||||||||||||||    |||||| ||||||  |||||||| ||  || ||||||| |||    
T  48599374 agagattgatctctccaatccactatcaatgagctc-ttccaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccct 48599472  T
Q  206 aatttctac 214  Q
    |||||||||    
T  48599473 aatttctac 48599481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 257
Target Start/End: Complemental strand, 29991181 - 29991032
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||  ||| |||||||||||||| | |||||| ||||||  ||  ||||  |  || | ||||| |||    
T  29991181 agagattgatctctccaatccactatcaatgagtt-attagaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaataacaaccct 29991083  T
Q  206 aatttctactcttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    ||||||||  |||||| |||||| | || || ||||||| ||||||||||||    
T  29991082 aatttctatccttttcccaatct-caccaatgaacaagacactcaatgattt 29991032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 159
Target Start/End: Complemental strand, 31519035 - 31518978
Alignment:
Q  101 gggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 159  Q
    |||| ||||||| ||||||||||| |||| ||||||||||| |||||||||||||||||    
T  31519035 gggagagagattgatctctccaatccactgtcaatgagttc-ttacaaagagatacaaa 31518978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 43504194 - 43504248
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 160  Q
    ||||||| | ||||||||||||||||||||||||||||   ||||||||||||||    
T  43504194 agagattgaactctccaattcactatcaatgagttcttacaaaagagatacaaaa 43504248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 4510588 - 4510695
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| || ||| |||| |||||||||||||||| ||| |||||||||||||  | |||||| ||||||  ||||| |||||  || ||||||| | |    
T  4510588 agagattgatttcttcaatccactatcaatgagttc-ttataaagagatacaaatgggttacaagaaattagcttcaataaactcacaaagaacaacctt 4510686  T
Q  206 aatttctac 214  Q
    |||||||||    
T  4510687 aatttctac 4510695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 4512430 - 4512537
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| || ||| |||| |||||||||||||||| ||| |||||||||||||  | |||||| ||||||  ||||| |||||  || ||||||| | |    
T  4512430 agagattgatttcttcaatccactatcaatgagttc-ttataaagagatacaaatgggttacaagaaattagcttcaataaactcacaaagaacaacctt 4512528  T
Q  206 aatttctac 214  Q
    |||||||||    
T  4512529 aatttctac 4512537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 118 - 214
Target Start/End: Complemental strand, 18126760 - 18126665
Alignment:
Q  118 ctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctac 214  Q
    ||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  || |||||  |  || ||||||| ||||||||||||    
T  18126760 ctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttgaacaagttcacaaagaacaaccctaatttctac 18126665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 155
Target Start/End: Original strand, 2759231 - 2759285
Alignment:
Q  100 tgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagata 155  Q
    |||| |||||||| || |||||||| |||||||||||||||| |||||||||||||    
T  2759231 tggggaagagattgatatctccaatccactatcaatgagttc-ttacaaagagata 2759285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 160
Target Start/End: Original strand, 5513717 - 5513760
Alignment:
Q  117 tctccaattcactatcaatgagttctttacaaagagatacaaaa 160  Q
    ||||||||||| | ||||||||||||||||||||||||| ||||    
T  5513717 tctccaattcagtgtcaatgagttctttacaaagagatataaaa 5513760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 151 - 214
Target Start/End: Original strand, 13065482 - 13065545
Alignment:
Q  151 agatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctac 214  Q
    |||||||||| | ||||||||||||| |||||||||||| ||| ||  ||| ||||||||||||    
T  13065482 agatacaaaacggttacaataaattagtttcaacaaactctcaaagtgcaatcctaatttctac 13065545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 25767000 - 25767053
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 160  Q
    ||||||| | ||||||||| |||||||||||||||||| | ||||||||||||||    
T  25767000 agagattgaactctccaatccactatcaatgagttcttca-aaagagatacaaaa 25767053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 39731497 - 39731443
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 160  Q
    ||||||| | ||||||||| ||||||||||||||||||   ||||||||||||||    
T  39731497 agagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa 39731443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 40808699 - 40808661
Alignment:
Q  124 ttcactatcaatgagttctttacaaagagatacaaaatg 162  Q
    ||||||||||| || ||||||||||||||||||||||||    
T  40808699 ttcactatcaacgaattctttacaaagagatacaaaatg 40808661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 48408932 - 48408878
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 160  Q
    ||||||| | ||||||||| ||||||||||||||| |||  ||||||||||||||    
T  48408932 agagattaaactctccaatccactatcaatgagttatttcaaaagagatacaaaa 48408878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 189
Target Start/End: Complemental strand, 27073927 - 27073862
Alignment:
Q  124 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaact 189  Q
    |||||| |||| |||||||||||||||||||||||||   |||||| ||||||  ||||| |||||    
T  27073927 ttcactgtcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaataaact 27073862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 189
Target Start/End: Original strand, 27204386 - 27204451
Alignment:
Q  124 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaact 189  Q
    |||||| |||| |||||||||||||||||||||||||   |||||| ||||||  ||||| |||||    
T  27204386 ttcactgtcaacgagttctttacaaagagatacaaaagagttacaagaaattaacttcaataaact 27204451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 176
Target Start/End: Complemental strand, 4178886 - 4178833
Alignment:
Q  121 caattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    |||| ||||||||||||||||||  ||||||||||||||| | |||||| ||||||    
T  4178886 caatccactatcaatgagttctt--caaagagatacaaaagggttacaagaaatta 4178833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 4e-38; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 22 - 262
Target Start/End: Complemental strand, 316974 - 316735
Alignment:
Q  22 aacaagataaagagggtggagaaaagagaacaacacatcaaaaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctcc 121  Q
    ||||| |||||||| || | |||||||||||||||||  | || | |||||  ||||| |||||| |||||  |||| | ||  ||||||| ||| ||||    
T  316974 aacaaaataaagagagtagggaaaagagaacaacacaa-agaattgtttaccaagttcggtccaacaatgacctactctaggggagagattgatccctcc 316876  T
Q  122 aattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttc 221  Q
     || || |||||||||||||||||||||||||||||||| | |||||| ||||||  |||||||| || ||  ||||||||||||||||||||  |||||    
T  316875 gatccattatcaatgagttctttacaaagagatacaaaaggattacaagaaattagcttcaacaagctctccaagaacaaacctaatttctacctttttc 316776  T
Q  222 tcaatctcctcccataaacaagagactcaatgatttcactc 262  Q
    |||||||  |||| |||||||||||| ||||||||||||||    
T  316775 tcaatcttttcccctaaacaagagacccaatgatttcactc 316735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 124 - 275
Target Start/End: Complemental strand, 35616280 - 35616129
Alignment:
Q  124 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctc 223  Q
    |||||||||||||||||||||||||||| |||||||| | |||||| ||||||  || ||| | || ||  |||||||||||||||||||||| ||||||    
T  35616280 ttcactatcaatgagttctttacaaagaaatacaaaagggttacaagaaattaacttaaacgagctctccaagaacaaacctaatttctactcatttctc 35616181  T
Q  224 aatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttt 275  Q
    |||||| |||| | ||||||||||||||||||||||||| ||||| ||||||    
T  35616180 aatctcttcccgtgaacaagagactcaatgatttcactcacccaaggtgttt 35616129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 260
Target Start/End: Original strand, 10054867 - 10055009
Alignment:
Q  117 tctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactc 216  Q
    |||||||| |||||||||||||||| |||||||||||||||||| | ||| || ||||||  ||||||||||| |   ||||||||| |||||||||| |    
T  10054867 tctccaatacactatcaatgagttcattacaaagagatacaaaa-ggttataagaaattagcttcaacaaactcttcaagaacaaacataatttctaccc 10054965  T
Q  217 ttttctcaatctcctcccataaacaagagactcaatgatttcac 260  Q
     |||||||||||| | | || ||||| |||||||||||||||||    
T  10054966 atttctcaatctctttctatgaacaatagactcaatgatttcac 10055009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 124 - 262
Target Start/End: Complemental strand, 30802939 - 30802802
Alignment:
Q  124 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctc 223  Q
    |||| |||||| |||||||||||||| |||||||||| | ||||||||||||| ||||||||| ||  || ||||||||||||| |||||| | ||| ||    
T  30802939 ttcattatcaacgagttctttacaaatagatacaaaaggattacaataaattagtttcaacaagctcacaaagaacaaacctaa-ttctacccatttttc 30802841  T
Q  224 aatctcctcccataaacaagagactcaatgatttcactc 262  Q
    |||||| || ||| || |||||||| |||||||||||||    
T  30802840 aatctcttctcatgaataagagactaaatgatttcactc 30802802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 45 - 275
Target Start/End: Complemental strand, 3326104 - 3325873
Alignment:
Q  45 aagagaacaacacatcaaaaa-tatttactcagttcagtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctt 143  Q
    ||||||| |||||| |||||| ||||||| |||||| |   || |||||  ||||||| || ||| ||| ||||||| ||| ||| |||| |||||||||    
T  3326104 aagagaaaaacacaccaaaaaatatttacccagttcggcgaaacaatgacctactatgtgagagatattgatctctctaatccaccatcattgagttctt 3326005  T
Q  144 tacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctcaatctcctcccataaacaag 243  Q
    |||||||||||||| |||| |||||| ||||||  |||||||| || |   |||||||| |||||||||||  |||| ||||| || ||| |  ||||||    
T  3326004 tacaaagagatacacaatggttacaagaaattagcttcaacaagctcttcaagaacaaaactaatttctacctttttttcaatttcttcctaagaacaag 3325905  T
Q  244 agactcaatgatttcactcgcccaatgtgttt 275  Q
    | || ||||| |||||||| ||||| ||||||    
T  3325904 atacccaatggtttcactcacccaaggtgttt 3325873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 24 - 214
Target Start/End: Original strand, 10700608 - 10700795
Alignment:
Q  24 caagataaagagggtggagaaaagagaacaacacatcaaaaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctccaa 123  Q
    |||||||||||| || ||||||||||||||||||   | || |||||||||||||| ||  || |||||  |||||||||  |||||   |||||||||     
T  10700608 caagataaagagcgtagagaaaagagaacaacacgaaagaattatttactcagttcggtgaaacaatgacctactatgggggagagag--atctctccac 10700705  T
Q  124 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctac 214  Q
    |||||||||||||||||||||  ||||||||||||||   ||| ||  |||||  |||||||| || ||  ||||||||||||||||||||    
T  10700706 ttcactatcaatgagttctttttaaagagatacaaaaatgttataa-gaattagcttcaacaagctctctaagaacaaacctaatttctac 10700795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 106 - 257
Target Start/End: Complemental strand, 25412888 - 25412739
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  25412888 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccct 25412790  T
Q  206 aatttctactcttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    ||||||||| |||||| |||||| | || || ||||||| ||||||||||||    
T  25412789 aatttctacccttttcccaatct-caccaatgaacaagacactcaatgattt 25412739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 114 - 177
Target Start/End: Complemental strand, 30793257 - 30793194
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattat 177  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  30793257 atctctccacttcactatcaattagttctttacaaagagatacaaaatggttacaataaattat 30793194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 229
Target Start/End: Original strand, 27637570 - 27637776
Alignment:
Q  22 aacaagataaagagggtggagaaaagagaacaacacatcaa-aaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctc 120  Q
    |||||||||||||| ||  |||||||| ||||||||  ||| ||||||| || |||||| |||||| |||||  |||| ||    ||||||| |||||||    
T  27637570 aacaagataaagagagtaaagaaaagataacaacac--caagaaatattcacccagttcggtccaacaatgacctactctgcaggagagattgatctctc 27637667  T
Q  121 caattcactatcaatgagttctttacaaagagatacaaaat-gtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactc-tt 218  Q
    |||| |||||| ||||||||| ||||||||||||||||||| | |||||| |||||| ||| ||||| ||   | ||||||| |||||||||||| | ||    
T  27637668 caatccactat-aatgagttc-ttacaaagagatacaaaatgggttacaagaaattagtttaaacaagctcataaagaacaaccctaatttctacccatt 27637765  T
Q  219 ttctcaatctc 229  Q
    |||||||||||    
T  27637766 ttctcaatctc 27637776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 28278444 - 28278276
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| | |    
T  28278444 agagattgatctctccaatccactatcaatgagtt-tttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccat 28278346  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | ||||| |||||| | || || ||||||| |||| |||| |||||||| ||||||||||||    
T  28278345 aatttctacccattttcccaatct-caccaatgaacaagacactc-atgattttcactctcccaatgtgttt 28278276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 42426275 - 42426444
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | || ||| ||||||  ||||||||  |  || ||||||| |||    
T  42426275 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttgcaagaaattagcttcaacaatttcacaaagaacaaccct 42426373  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | |||||||||||| | || || ||||||| ||||||| | |||||||| ||||| ||||||    
T  42426374 aatttctacccattttctcaatct-caccaatgaacaagacactcaataattttcactcacccaaggtgttt 42426444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 213593 - 213486
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  || ||||| ||  || ||||||| |||    
T  213593 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagctttaacaagctcacaaagaacaaccct 213495  T
Q  206 aatttctac 214  Q
    |||||||||    
T  213494 aatttctac 213486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 229
Target Start/End: Original strand, 3075698 - 3075821
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||||||||||||| || ||| ||||||| |||||||||  | |||||| ||||||  |||| ||| ||  || |||||||||||    
T  3075698 agagattgatctctccaattcactatcaacgaattc-ttacaaaaagatacaaatgggttacaagaaattagattcagcaagctcacaaagaacaaacct 3075796  T
Q  206 aatttcta-ctcttttctcaatctc 229  Q
    |||||||| || |||||||||||||    
T  3075797 aatttctacctattttctcaatctc 3075821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 13488331 - 13488224
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  13488331 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccct 13488233  T
Q  206 aatttctac 214  Q
    |||||||||    
T  13488232 aatttctac 13488224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 114 - 229
Target Start/End: Original strand, 13695738 - 13695854
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cctaatttct 212  Q
    ||||||| ||| |||||| |||||||||||||||||||||||||||| | |||||| ||||||  || ||||| ||  || |||||||| |||||||| |    
T  13695738 atctctctaatccactattaatgagttctttacaaagagatacaaaagggttacaagaaattagctttaacaagctcacaaagaacaaaccctaatttgt 13695837  T
Q  213 actcttttctcaatctc 229  Q
    || |||||| |||||||    
T  13695838 acccttttcccaatctc 13695854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 16452208 - 16452101
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||||||||||||||| |||||| ||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||   | ||||||||| |    
T  16452208 agagatttatctctccaatccactatgaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcagaaagaacaaactt 16452110  T
Q  206 aatttctac 214  Q
    |||||||||    
T  16452109 aatttctac 16452101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 33831808 - 33831701
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| |||||| |||| |||||||||||||||||| |||||||||||||||  | |||||| ||||||  || ||||| ||  || |||||||||||    
T  33831808 agagattgatctcttcaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacct 33831710  T
Q  206 aatttctac 214  Q
    |||||||||    
T  33831709 aatttctac 33831701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 533897 - 533728
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| |||| |||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || ||| ||| |||    
T  533897 agagattgatctttccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaaaaaattagcttcaacaagctcacaaagaccaaccct 533799  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | ||||| |||||| | || || ||||||| || |||||| |||||||| ||||| ||||||    
T  533798 aatttctacccattttcccaatct-caccaatgaacaagacacgcaatgattttcactcacccaaggtgttt 533728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 8565986 - 8566155
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||||| ||| || ||||||||  | |||||| ||||||  || ||||| ||  || |||||||||||    
T  8565986 agagattgatctctccaatccactatcaatgagttctt-acagagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacct 8566084  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    || |||||| | |||||||||||||  |  || ||||||| ||||||||| |||||||| ||||| ||||||    
T  8566085 aagttctacccattttctcaatctca-caaatgaacaagacactcaatgattttcactcacccaaggtgttt 8566155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 42428470 - 42428639
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || |||| || | |    
T  42428470 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaaaaaccat 42428568  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  42428569 aatttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 42428639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 186
Target Start/End: Original strand, 9049390 - 9049461
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 186  Q
    ||||||||||| |||| ||||||||||||| |||||||||||||||||| |||||| ||||||  ||||||||    
T  9049390 atctctccaatccactgtcaatgagttctt-acaaagagatacaaaatggttacaagaaattagcttcaacaa 9049461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 13239879 - 13239800
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 186  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||   |||||| ||||||  ||||||||    
T  13239879 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagagttacaagaaattagcttcaacaa 13239800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 105 - 169
Target Start/End: Original strand, 33906069 - 33906133
Alignment:
Q  105 aagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaa 169  Q
    |||||||| |||| ||||||  |||||||||||||||||||||||||||||||||| | ||||||    
T  33906069 aagagattgatctttccaatctactatcaatgagttctttacaaagagatacaaaaggattacaa 33906133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 38747133 - 38747026
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| | ||||||||||||| ||| ||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  38747133 agagattgatctctccaatcctctatcaatgagtt-tttccaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccct 38747035  T
Q  206 aatttctac 214  Q
    |||||||||    
T  38747034 aatttctac 38747026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 39468589 - 39468696
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||| ||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  39468589 agagattgatctctctaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccct 39468687  T
Q  206 aatttctac 214  Q
    |||||||||    
T  39468688 aatttctac 39468696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 40147389 - 40147282
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||    |||||| ||||||  |||||||| ||  |  ||||||| |||    
T  40147389 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacgaagaacaaccct 40147291  T
Q  206 aatttctac 214  Q
    |||||||||    
T  40147290 aatttctac 40147282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 28750695 - 28750864
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||| |||||||||  | |||||  ||||||  ||||||||  |   | ||||||| |||    
T  28750695 agagattgatctctccaatccactatcaatgagttc-ttacaaaaagatacaaatgggttacaggaaattaacttcaacaatttcataaagaacaaccct 28750793  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  28750794 aatttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 28750864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 37439269 - 37439216
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 160  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  37439269 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaa 37439216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 5058173 - 5058121
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 159  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||    
T  5058173 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaa 5058121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 538153 - 538074
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 186  Q
    ||||||| |||||||||||  ||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||    
T  538153 agagattgatctctccaatctactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaa 538074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 114 - 214
Target Start/End: Complemental strand, 31183091 - 31182993
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 213  Q
    ||||||||||| || ||||||||||||| |||||||| ||||| ||||| |||||| ||||||  || ||||||||  || ||||||| |||||||||||    
T  31183091 atctctccaatccagtatcaatgagttc-ttacaaagggatac-aaatggttacaagaaattaacttaaacaaactcacaaagaacaatcctaatttcta 31182994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 13343188 - 13343120
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    ||||||| | ||||||||| ||||||||||||||||||  ||||||||||||||| | |||||| ||||||    
T  13343188 agagattgaactctccaatccactatcaatgagttctt--caaagagatacaaaaggattacaagaaatta 13343120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 32636952 - 32636883
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    ||||||| ||||||||||| ||||||||| |||||| |||||||||||||||||  | |||||| ||||||    
T  32636952 agagattgatctctccaatccactatcaaagagttc-ttacaaagagatacaaatgggttacaagaaatta 32636883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 30682962 - 30683043
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagt-tctttacaaagagatacaaaatgtttacaataaattattttcaacaa 186  Q
    ||||||| ||||||||||| |||||||||||||| |  ||||||||| |||||||| | |||||| ||||||  ||||||||    
T  30682962 agagattgatctctccaatccactatcaatgagtattcttacaaagaaatacaaaagggttacaagaaattagcttcaacaa 30683043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 209
Target Start/End: Complemental strand, 32609646 - 32609561
Alignment:
Q  124 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatt 209  Q
    |||| ||||||| ||||||||||||||| ||||||||   |||||| ||||||  ||||||||||| ||| |||| |||| |||||    
T  32609646 ttcaatatcaataagttctttacaaagaaatacaaaagagttacaagaaattaacttcaacaaactctcaaagaataaacttaatt 32609561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 5007842 - 5007806
Alignment:
Q  124 ttcactatcaatgagttctttacaaagagatacaaaa 160  Q
    |||||||||||||||||||||||||||||||| ||||    
T  5007842 ttcactatcaatgagttctttacaaagagatagaaaa 5007806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 32583340 - 32583376
Alignment:
Q  124 ttcactatcaatgagttctttacaaagagatacaaaa 160  Q
    |||||||||||||||||||||||||| ||||||||||    
T  32583340 ttcactatcaatgagttctttacaaaaagatacaaaa 32583376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 159
Target Start/End: Complemental strand, 42927030 - 42926967
Alignment:
Q  95 tactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 159  Q
    ||||||| || |||||||||| ||| |||| |||| ||||||||||| |||||||||||||||||    
T  42927030 tactatgagagagagatttatttcttcaatccactgtcaatgagttc-ttacaaagagatacaaa 42926967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 189
Target Start/End: Complemental strand, 8445844 - 8445761
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaact 189  Q
    ||||||| |||| || |||  ||||||||| ||||||||| ||||| |||||||| | |||||| ||||||  |||||||||||    
T  8445844 agagattcatctttctaatctactatcaattagttctttataaagaaatacaaaagggttacaagaaattagcttcaacaaact 8445761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 229
Target Start/End: Complemental strand, 16409603 - 16409480
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| | ||||||||| ||||||||||||||||||   ||||||||||||||   |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  16409603 agagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttcacaaagaacaaccct 16409504  T
Q  206 aatttctactcttttctcaatctc 229  Q
    ||||||||| |||||  |||||||    
T  16409503 aatttctaccctttttccaatctc 16409480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 221
Target Start/End: Complemental strand, 26178010 - 26177895
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| | ||||||||| ||||||||||||||||||   ||||||||||||||   |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  26178010 agagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttcacaaagaacaaccct 26177911  T
Q  206 aatttctactcttttc 221  Q
    ||||||||| ||||||    
T  26177910 aatttctacccttttc 26177895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 36074083 - 36074135
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 160  Q
    ||||||| | ||||||||| ||||||||||||||||||  |||||||||||||||    
T  36074083 agagattgaactctccaatccactatcaatgagttctt--caaagagatacaaaa 36074135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 95 - 186
Target Start/End: Original strand, 42309964 - 42310054
Alignment:
Q  95 tactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 186  Q
    |||||||||  ||||||| ||||| | ||| |||||||||| ||||||| ||||||||||||||||   |||||| ||||||  ||||||||    
T  42309964 tactatgggggagagattgatctcgctaatccactatcaataagttctt-acaaagagatacaaaagagttacaagaaattagcttcaacaa 42310054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 9789264 - 9789318
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 160  Q
    ||||||| | ||||||||| ||||||||||||||||||   ||||||||||||||    
T  9789264 agagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa 9789318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 16137136 - 16137074
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    ||||||| ||||||||||||||||||| ||| |||||||| || ||| | |||||| ||||||    
T  16137136 atctctcaaattcactatcaatgagttgttttcaaagagaaaccaaaaggttacaagaaatta 16137074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 18441688 - 18441742
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 160  Q
    ||||||| | ||||||||| ||||||||||||||||||   ||||||||||||||    
T  18441688 agagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa 18441742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 30182716 - 30182647
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    ||||||| | ||||||||| |||||||||||||||| || |||||||||| |||| | |||||| ||||||    
T  30182716 agagattgaactctccaatccactatcaatgagttc-ttccaaagagatagaaaagggttacaagaaatta 30182647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 158
Target Start/End: Original strand, 31992247 - 31992289
Alignment:
Q  116 ctctccaattcactatcaatgagttctttacaaagagatacaa 158  Q
    ||||||||||||||||||| ||||| |||||||| ||||||||    
T  31992247 ctctccaattcactatcaaagagttatttacaaatagatacaa 31992289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 220
Target Start/End: Complemental strand, 22097981 - 22097879
Alignment:
Q  116 ctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctact 215  Q
    ||||| ||| ||||||||||||||| |||||||| ||||||  || | ||| || ||||||  ||||||||| | ||  ||||||| ||||||||||||     
T  22097981 ctctctaatccactatcaatgagttttttacaaatagatac--aagggttataagaaattaacttcaacaaattctccaagaacaaccctaatttctacc 22097884  T
Q  216 ctttt 220  Q
    |||||    
T  22097883 ctttt 22097879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 27015651 - 27015599
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 159  Q
    ||||||| |||| | |||| |||||||||||||||| |||||||||||||||||    
T  27015651 agagattgatctgtacaatccactatcaatgagttc-ttacaaagagatacaaa 27015599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 275
Target Start/End: Complemental strand, 4160671 - 4160591
Alignment:
Q  195 agaacaaacctaatttctactcttttctcaatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttt 275  Q
    ||||||||||||||||||||  |||||  ||||||||| ||| | ||| | | ||| |||||||||||  |||||||||||    
T  4160671 agaacaaacctaatttctaccattttccaaatctcctctcatgagcaaaacattcattgatttcactcaaccaatgtgttt 4160591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 149
Target Start/End: Complemental strand, 40293601 - 40293569
Alignment:
Q  117 tctccaattcactatcaatgagttctttacaaa 149  Q
    ||||||||| |||||||||||||||||||||||    
T  40293601 tctccaatttactatcaatgagttctttacaaa 40293569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 75)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 130 - 275
Target Start/End: Complemental strand, 32091583 - 32091438
Alignment:
Q  130 atcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctcaatctc 229  Q
    ||||||| |||||||||||||||||||||||   |||||| |||||| |||||||||||| ||  |||||||||||||||||||   ||||| ||||||     
T  32091583 atcaatgtgttctttacaaagagatacaaaagagttacaagaaattagtttcaacaaactctccaagaacaaacctaatttctagcattttcccaatctt 32091484  T
Q  230 ctcccataaacaagagactcaatgatttcactcgcccaatgtgttt 275  Q
    ||||||| ||||||||||||||||||||| ||| ||||||||||||    
T  32091483 ctcccatgaacaagagactcaatgatttcgctcacccaatgtgttt 32091438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 106 - 257
Target Start/End: Complemental strand, 33090007 - 33089856
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||| ||| |||||||||||||||||||||| |||||||||||||| ||| |||||||||  |||||||| || ||  ||||||||| |    
T  33090007 agagattgatctctctaatccactatcaatgagttctttacagagagatacaaaatggttataataaattagcttcaacaagctctccaagaacaaacat 33089908  T
Q  206 aatttctactcttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    |||||||| || | |||||||||| |||||| ||||||| ||||||||||||    
T  33089907 aatttctattcatctctcaatctcttcccatgaacaagacactcaatgattt 33089856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 114 - 275
Target Start/End: Complemental strand, 34112938 - 34112775
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 213  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||| | |||||  ||||||  |||||||| || || |||||||||| |||||||||    
T  34112938 atctctccacttcactatcaatgagttctttacaaagagatgcaaaagggttacatgaaattagcttcaacaagctctcctagaacaaacataatttcta 34112839  T
Q  214 ctcttttct--caatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttt 275  Q
    || |||| |  ||||||| ||||||  |||| || |||||||||||||| ||||||||||||||    
T  34112838 ctttttttttccaatctcttcccatgtacaaaaggctcaatgatttcacccgcccaatgtgttt 34112775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 22 - 275
Target Start/End: Original strand, 38811147 - 38811397
Alignment:
Q  22 aacaagataaagagggtggagaaaagagaacaacacatcaaaaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctcc 121  Q
    ||||| |||||||| || ||||||||||||||||||   | || | ||||| |||||| |||||| |||||  |||| | ||  |||||   ||||||||    
T  38811147 aacaatataaagagagtagagaaaagagaacaacaccgaagaattgtttacccagttcggtccaacaatgacctactcttggggagagag--atctctcc 38811244  T
Q  122 aattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttc 221  Q
      ||||||||||||||||  |||||||||| |||||||||| | || | ||||||  ||||||||||| ||  ||||||||| |||||| ||| | ||||    
T  38811245 gcttcactatcaatgagtcatttacaaaga-atacaaaatggtcactagaaattaaattcaacaaactctccaagaacaaacttaatttgtacccatttc 38811343  T
Q  222 tcaatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttt 275  Q
    |||||||| | | || ||||||||||||||||||||||||| ||||| ||||||    
T  38811344 tcaatctctttctatgaacaagagactcaatgatttcactcacccaaggtgttt 38811397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 53 - 262
Target Start/End: Original strand, 21703822 - 21704032
Alignment:
Q  53 aacacatcaa-aaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaaga 151  Q
    |||||||||| |||| ||||| |||||| ||| || |||||  ||||||||| |  ||||| || |||||||| |||| ||||||||||||||||||| |    
T  21703822 aacacatcaagaaatgtttacccagttcggtcaaacaatgacctactatggggat-agattgatatctccaatccactgtcaatgagttctttacaaaaa 21703920  T
Q  152 gatacaaaatgtttacaataaattattttcaacaaactatcatagaac-aaacctaatttctactcttttctcaatctcctcccataaacaagagactca 250  Q
    ||||||||| |  ||||| |||| || |||||||| || ||  ||||| |||||||||||||||  ||||||||||||| |||||  ||||| ||||| |    
T  21703921 gatacaaaaagggtacaagaaatcatcttcaacaagctttctaagaacaaaacctaatttctacctttttctcaatctcttcccaagaacaatagactta 21704020  T
Q  251 atgatttcactc 262  Q
    ||||||||||||    
T  21704021 atgatttcactc 21704032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 22 - 214
Target Start/End: Complemental strand, 12073603 - 12073413
Alignment:
Q  22 aacaagataaagagggtggagaaaagagaacaacacatcaa-aaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctc 120  Q
    |||||||||||||| ||  |||||||| ||||||||  ||| |||| || ||  ||||| |||||| |||||  |||| ||| | ||||||| |||||||    
T  12073603 aacaagataaagagagtaaagaaaagataacaacac--caagaaatgttcacctagttcggtccaacaatgacctactctggaagagagattgatctctc 12073506  T
Q  121 caattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctac 214  Q
    |||| |||||||||||||||| |||||||||||||||||    |||||||||||||  |||||||| ||  || ||||||||||||||||||||    
T  12073505 caatccactatcaatgagttc-ttacaaagagatacaaatgagttacaataaattagcttcaacaagctcacaaagaacaaacctaatttctac 12073413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 26175676 - 26175845
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| |||||| ||||||||| ||  || ||||||| |||    
T  26175676 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaccct 26175774  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||| | | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  26175775 aatttctccccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 26175845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 257
Target Start/End: Original strand, 22882791 - 22882941
Alignment:
Q  107 gagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaaccta 206  Q
    |||||| || |||| ||| ||||| ||||||||||||||| ||||||||||||| | |||||| ||||||  ||||||||||| ||  ||||||||||||    
T  22882791 gagattgatttctctaatccactaccaatgagttctttacgaagagatacaaaagggttacaagaaattagcttcaacaaactctccaagaacaaaccta 22882890  T
Q  207 atttctactcttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    |||| ||  | ||| |||||||| | |||| ||||||  ||||||||||||    
T  22882891 atttttatccatttttcaatctctttccatgaacaaggcactcaatgattt 22882941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 257
Target Start/End: Original strand, 22934455 - 22934605
Alignment:
Q  107 gagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaaccta 206  Q
    |||||| || |||| ||| ||||| ||||||||||||||| ||||||||||||| | |||||| ||||||  ||||||||||| ||  ||||||||||||    
T  22934455 gagattgatttctctaatccactaccaatgagttctttacgaagagatacaaaagggttacaagaaattagcttcaacaaactctccaagaacaaaccta 22934554  T
Q  207 atttctactcttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    |||| ||  | ||| |||||||| | |||| ||||||  ||||||||||||    
T  22934555 atttttatccatttttcaatctctttccatgaacaaggcactcaatgattt 22934605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 22 - 204
Target Start/End: Original strand, 26699399 - 26699580
Alignment:
Q  22 aacaagataaagagggtggagaaaagagaacaacacatcaaaaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctcc 121  Q
    |||||||||||||| ||  |||||||| |||  ||| | | |||| ||||| |||||| |||||| |||||  |||| ||||| ||||||| ||||||||    
T  26699399 aacaagataaagagagtaaagaaaagataacggcac-taagaaatttttacccagttcggtccaacaatgacctactctgggatagagattgatctctcc 26699497  T
Q  122 aattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacc 204  Q
    ||| || ||| ||||||||||||||||||||||||||||   |||||| ||||||  |||||||| ||  || ||||||||||    
T  26699498 aatccattataaatgagttctttacaaagagatacaaaagagttacaagaaattagcttcaacaagctcacaaagaacaaacc 26699580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 63 - 212
Target Start/End: Complemental strand, 33990016 - 33989867
Alignment:
Q  63 aaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatg 162  Q
    |||| ||||| ||||||| ||||| |||||  |||| |||   ||||||| ||||||||||| |||||| || ||||| ||||||||||||||||||| |    
T  33990016 aaatgtttacccagttcaatccaagaatgacctactctggtggagagattgatctctccaatccactattaacgagttatttacaaagagatacaaaagg 33989917  T
Q  163 tttacaataaattattttcaacaaactatcatagaacaaacctaatttct 212  Q
     |||||| ||||||  ||||||||||| ||  |||||||||||| |||||    
T  33989916 attacaagaaattagcttcaacaaactctctaagaacaaacctagtttct 33989867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 8665536 - 8665429
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||||||||||||  | |||||| ||||||  |||||||| || ||| ||||||| |||    
T  8665536 agagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctctcaaagaacaaccct 8665438  T
Q  206 aatttctac 214  Q
    |||||||||    
T  8665437 aatttctac 8665429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 31474279 - 31474109
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaa-acc 204  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||||||||||    |||||| ||||||  |||||||||||   | ||||||| |||    
T  31474279 agagatttatctctccaatcaactatcaatgagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaaactcaaaaagaacaagacc 31474181  T
Q  205 taatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    |||||||||| | |||||||||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  31474180 taatttctacccattttctcaatct-caccaatgaacaagacactcaatgattttcactcacccaaagtgttt 31474109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 106 - 257
Target Start/End: Original strand, 56178677 - 56178827
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  56178677 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccct 56178775  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||||||    
T  56178776 aatttctaccctttttcccaatct-caccaatgaacaagacactcaatgattt 56178827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 106 - 220
Target Start/End: Complemental strand, 12119668 - 12119553
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacc- 204  Q
    ||||||| ||||||||||| |||||| |||||||||||||||||||||||||||| | |||||| ||||||  ||||| ||  |  || ||||||||||     
T  12119668 agagattgatctctccaatccactataaatgagttctttacaaagagatacaaaagggttacaagaaattagcttcaaaaagttcacaaagaacaaacca 12119569  T
Q  205 taatttctactctttt 220  Q
    ||||||||||||||||    
T  12119568 taatttctactctttt 12119553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 124 - 259
Target Start/End: Complemental strand, 41961528 - 41961393
Alignment:
Q  124 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctc 223  Q
    |||| ||||||||| |||||||||||||||||||||||| |||||| ||||||     | ||| || ||   |||||||| ||||||||||||||||  |    
T  41961528 ttcaatatcaatgacttctttacaaagagatacaaaatgattacaagaaattagcactaccaagctctccatgaacaaacttaatttctactctttttcc 41961429  T
Q  224 aatctcctcccataaacaagagactcaatgatttca 259  Q
    |||||| || ||| ||||||||||||||||||||||    
T  41961428 aatctcttctcatgaacaagagactcaatgatttca 41961393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 114 - 275
Target Start/End: Original strand, 54199954 - 54200115
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 213  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||||||||||    
T  54199954 atctctctaattcactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaatttcta 54200052  T
Q  214 ctc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    | | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||||||||||    
T  54200053 cccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaatgtgttt 54200115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 22 - 229
Target Start/End: Complemental strand, 379591 - 379385
Alignment:
Q  22 aacaagataaagagggtggagaaaagagaacaacacatcaa-aaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctc 120  Q
    |||||||||||||| ||  |||||||| ||||||||  ||| |||| || |  |||||| |||||| |||||  |||| |||   ||||||| |||||||    
T  379591 aacaagataaagagagtaaagaaaagataacaacac--caagaaatgttcatccagttcggtccaacaatgacctactctggaggagagattgatctctc 379494  T
Q  121 caattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactc-ttt 219  Q
    |||| |||||||||| ||||||| |||||| ||||||||  | |||||| ||||||  |||||||| ||  || |||||||||||||||||||| | |||    
T  379493 caatccactatcaattagttctt-acaaagcgatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaacctaatttctacccattt 379395  T
Q  220 tctcaatctc 229  Q
    ||||||||||    
T  379394 tctcaatctc 379385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 6542219 - 6542390
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cc 204  Q
    ||||||| ||||||||||| ||||||||| |||||| |||||||||||||||||| | | |||| |||||| ||||||||| ||  || |||||||| ||    
T  6542219 agagattgatctctccaatccactatcaacgagttc-ttacaaagagatacaaaaggctaacaagaaattagtttcaacaagctcacaaagaacaaatcc 6542317  T
Q  205 taatttctac--tcttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||||  | ||||| |||||||| || || ||||||| ||||||| | |||||||| ||||| ||||||    
T  6542318 taatttctaccattttttcccaatctcc-ccaatgaacaagacactcaataattttcactcacccaaggtgttt 6542390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 27417005 - 27417112
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  27417005 agagattgatctctccaatccactatcaatgagtt-tttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccct 27417103  T
Q  206 aatttctac 214  Q
    |||||||||    
T  27417104 aatttctac 27417112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 5429807 - 5429638
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||| |||||||||  | |||||| ||||||  |||||||| ||  |  |||| || |||    
T  5429807 agagattgatctctccaatccactatcaatgagttc-ttacaaatagatacaaatgggttacaagaaattagcttcaacaagctcacgaagaataaccct 5429709  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||||| ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  5429708 aatttctactcattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 5429638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 275
Target Start/End: Complemental strand, 6677597 - 6677428
Alignment:
Q  107 gagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatc--atagaacaaacc 204  Q
    |||||| ||||||| ||| || |||||| || ||||||||||||| |||||||| | |||||| ||||||  |||||||| || ||  | | || |||||    
T  6677597 gagattgatctctcaaatccattatcaaagacttctttacaaagatatacaaaagggttacaagaaattagcttcaacaagctctccaagaaaaaaaacc 6677498  T
Q  205 taatttctactcttttctcaatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttt 275  Q
    ||||||||||  ||||| |||| || |||||  ||||||||||||||| |||||||||  |||||||||||    
T  6677497 taatttctaccattttc-caatttcttcccaagaacaagagactcaattatttcactcatccaatgtgttt 6677428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 36994652 - 36994483
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||| ||||||||  | |||||| ||||||  |||||||| ||  || ||||||| | |    
T  36994652 agagattgatctctccaatccactatcaatgagttc-ttacaaagggatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaacctt 36994554  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  36994553 aatttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 36994483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 229
Target Start/End: Complemental strand, 46703712 - 46703505
Alignment:
Q  22 aacaagataaagagggtggagaaaagagaacaacacatcaa-aaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctc 120  Q
    |||||||||||||| ||  |||||||| ||||||||  ||| |||| || || || ||| |||||| |||||  |||| |||   ||||||| |||||||    
T  46703712 aacaagataaagagagtaaagaaaagataacaacac--caagaaatgttcacccaattcggtccaacaatgacctactctggaggagagattgatctctc 46703615  T
Q  121 caattcactatcaatgagttctttacaaagagatacaaaat-gtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactc-tt 218  Q
    |||| |||||| ||||||||| ||||||||||||||||||| | |||||| ||||||  || ||||| ||  || ||||||| |||||||||||||| ||    
T  46703614 caatccactataaatgagttc-ttacaaagagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttctactcatt 46703516  T
Q  219 ttctcaatctc 229  Q
    ||| |||||||    
T  46703515 ttcccaatctc 46703505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 47038451 - 47038618
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| ||||||||||||| || ||||||| |||||| ||||| |||||| ||||||  |||||||| ||  || ||||||| |||    
T  47038451 agagattgatctctccaatccactatcaatgag-tccttacaaacagatac-aaatgattacaagaaattagcttcaacaagctcacaaagaacaaccct 47038548  T
Q  206 aatttctactcttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | |||  |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  47038549 aatttctacccattttccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 47038618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 2209842 - 2209734
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaat-gtttacaataaattattttcaacaaactatcatagaacaaacc 204  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||| | |||||| ||||||  |||||||| ||  || |||| || ||    
T  2209842 agagattaatctctccaatccactatcaatgagttc-ttacaaagagatacaaaatgggttacaagaaattagcttcaacaagctcacaaagaaaaaccc 2209744  T
Q  205 taatttctac 214  Q
    ||||||||||    
T  2209743 taatttctac 2209734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 100 - 275
Target Start/End: Original strand, 12745470 - 12745645
Alignment:
Q  100 tgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaac 199  Q
    |||| |||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| |||||| |||  ||||  |  || |||||    
T  12745470 tggggaagagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagttttgacaagttcacaaagaac 12745568  T
Q  200 aaacctaatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    || |||||||||||| | |||||  ||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  12745569 aaccctaatttctacccattttcctaatct-cgccaatgaacaagacactcaatgattttcactcacccaaggtgttt 12745645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 41964544 - 41964436
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaat-gtttacaataaattattttcaacaaactatcatagaacaaacc 204  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||| |||||||||| | |||||||||||||  || ||||| ||  || ||||||| ||    
T  41964544 agagattgatctctccaatccactatcaatgagttc-ttacaaagggatacaaaatgggttacaataaattagcttaaacaagctcacaaagaacaaccc 41964446  T
Q  205 taatttctac 214  Q
    ||||||||||    
T  41964445 taatttctac 41964436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 128 - 241
Target Start/End: Original strand, 44570427 - 44570539
Alignment:
Q  128 ctatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctcaatc 227  Q
    |||||||||||||||||||||||||||||||||   |||||| |||||| ||||||||| || ||  | ||||||| |||||||||| | ||| ||||||    
T  44570427 ctatcaatgagttctttacaaagagatacaaaaatgttacaagaaattagtttcaacaagctctccaacaacaaacataatttctac-catttttcaatc 44570525  T
Q  228 tcctcccataaaca 241  Q
    || |||||| ||||    
T  44570526 tcttcccatgaaca 44570539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 48143171 - 48143001
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||  ||||||||||||| | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  48143171 agagattgatctctccaatccactatcaatgagttc-ttatgaagagatacaaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccct 48143073  T
Q  206 aatttctac--tcttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    |||||||||  | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  48143072 aatttctacctttttttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 48143001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 115 - 212
Target Start/End: Original strand, 6199921 - 6200020
Alignment:
Q  115 tctctccaattcactatcaatgagttctttacaaaga--gatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttct 212  Q
    |||||||| ||||||||||||||||| |||||||| |  |||||||||   ||||||||||||| |||||||||| | ||  ||||||||||||||||||    
T  6199921 tctctccacttcactatcaatgagttatttacaaatatagatacaaaagagttacaataaattagtttcaacaaagtgtctaagaacaaacctaatttct 6200020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 9927498 - 9927605
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  9927498 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccct 9927596  T
Q  206 aatttctac 214  Q
    |||||||||    
T  9927597 aatttctac 9927605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 257
Target Start/End: Original strand, 34570454 - 34570604
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||   | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  34570454 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaattgggttacaagaaattagcttcaacaagttcacaaagaacaaccct 34570552  T
Q  206 aatttcta-ctcttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    |||||||| || ||||| |||||| | || || ||||||| ||||||||||||    
T  34570553 aatttctacctattttcccaatct-caccaatgaacaagacactcaatgattt 34570604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 40632573 - 40632466
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || |||||||  ||    
T  40632573 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaataggttacaagaaattagcttcaacaagctcacaaagaacaactct 40632475  T
Q  206 aatttctac 214  Q
    |||||||||    
T  40632474 aatttctac 40632466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 229
Target Start/End: Original strand, 50673887 - 50674009
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||    |||||| ||||||  |||||||| ||  || || |||| |||    
T  50673887 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaag-acaatcct 50673984  T
Q  206 aatttctactc-ttttctcaatctc 229  Q
    ||||||||||| |||||||||||||    
T  50673985 aatttctactcattttctcaatctc 50674009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 274
Target Start/End: Complemental strand, 3913576 - 3913408
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||||| |||||||  | ||| || ||||||  |||||||||||  || ||||||   ||    
T  3913576 agagattgatctctccaatccactatcaatgagttctt-acaaagatatacaaatgggttaaaagaaattagcttcaacaaactcacaaagaacagctct 3913478  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgtt 274  Q
    ||||||||||| ||||| |||||||  |  || ||||||| ||||||||| |||||||| ||||| |||||    
T  3913477 aatttctactcattttcccaatctca-caaatgaacaagacactcaatgattttcactcacccaaggtgtt 3913408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 214
Target Start/End: Complemental strand, 24969238 - 24969133
Alignment:
Q  108 agatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaa 207  Q
    ||||||||||||||||| |||||||||| ||||| |||||||||||||||||    |||||| ||||||  |||||||| ||  || |||||||| ||||    
T  24969238 agatttatctctccaatccactatcaattagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaatctaa 24969140  T
Q  208 tttctac 214  Q
    |||||||    
T  24969139 tttctac 24969133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 220
Target Start/End: Complemental strand, 37740753 - 37740640
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  37740753 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccct 37740655  T
Q  206 aatttctactctttt 220  Q
    ||||| ||| |||||    
T  37740654 aatttataccctttt 37740640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 4588087 - 4587979
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cc 204  Q
    |||||||  |||||||||| |||||||||||||||| |||||||||||||||||| | |||||| ||||||  |||||||| ||  || |||||||| |     
T  4588087 agagattgttctctccaatccactatcaatgagttc-ttacaaagagatacaaaagggttacaagaaattagcttcaacaagcttacaaagaacaaatct 4587989  T
Q  205 taatttctac 214  Q
    ||||||||||    
T  4587988 taatttctac 4587979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 257
Target Start/End: Complemental strand, 53345319 - 53345195
Alignment:
Q  133 aatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaa-caaacctaatttctactcttttctcaatctcct 231  Q
    ||||||||||||||||| ||||| |||| | |||||| |||||| ||||||||| ||  || |||| ||| | |||||||||   |||||||||||| ||    
T  53345319 aatgagttctttacaaaaagatataaaagggttacaagaaattagtttcaacaagctcacaaagaatcaaccttaatttctatcattttctcaatct-ct 53345221  T
Q  232 cccataaacaagagactcaatgattt 257  Q
    || |||||||||| ||||||||||||    
T  53345220 ccgataaacaagacactcaatgattt 53345195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 12744081 - 12744156
Alignment:
Q  100 tgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    |||| |||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||    
T  12744081 tggggaagagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaatta 12744156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 214
Target Start/End: Complemental strand, 35662561 - 35662462
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 213  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||    |||||| ||||||  |||||||||||   | ||||||| |||||||||||    
T  35662561 atctctccaatccactatcaatgagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaaactcataaagaacaaccctaatttcta 35662463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 54883148 - 54883041
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||| ||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || | ||||| |||    
T  54883148 agagattgatccctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaaaaacaaccct 54883050  T
Q  206 aatttctac 214  Q
    |||||||||    
T  54883049 aatttctac 54883041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 213
Target Start/End: Complemental strand, 8648267 - 8648161
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| || ||||||||||||| |||||||||||||||||  | ||| || ||||||  |||||||||||  ||  |||||| |||    
T  8648267 agagattgatctctccaatccaatatcaatgagttc-ttacaaagagatacaaatgggttataagaaattagcttcaacaaactcacaatgaacaaccct 8648169  T
Q  206 aatttcta 213  Q
    ||||||||    
T  8648168 aatttcta 8648161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 109 - 229
Target Start/End: Complemental strand, 21688374 - 21688253
Alignment:
Q  109 gatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaat 208  Q
    |||| |||||||||||||| ||||||||||||| || | ||||||||||||    |||||| |||||| ||||||||| ||  || ||||||| ||||||    
T  21688374 gattgatctctccaattcattatcaatgagttc-ttccgaagagatacaaatgagttacaaaaaattagtttcaacaagctcacaaagaacaaccctaat 21688276  T
Q  209 ttctactc--ttttctcaatctc 229  Q
    |||||| |  |||||||||||||    
T  21688275 ttctacccatttttctcaatctc 21688253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 12743965 - 12744034
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||    
T  12743965 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaatta 12744034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 12745354 - 12745423
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||    
T  12745354 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaatta 12745423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 48893678 - 48893851
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa----actatcatagaacaa 201  Q
    ||||||| ||||||||||| ||||||||| |||||| |||||||||||||||||    |||||| ||||||  ||||||||    || | ||  ||||||    
T  48893678 agagattgatctctccaatccactatcaaagagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaacaatgaacaa 48893776  T
Q  202 acctaatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
     |||||||||||| | |||||||||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  48893777 ccctaatttctacccattttctcaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 48893851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 6656084 - 6656032
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 159  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||    
T  6656084 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaa 6656032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 26364364 - 26364257
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||| ||||||||| |||||||||||||||||    |||||| ||||||  ||||||||  |  || ||||||| |||    
T  26364364 agagattgatctctccaatccactattaatgagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaagttcacaaagaacaaccct 26364266  T
Q  206 aatttctac 214  Q
    |||||||||    
T  26364265 aatttctac 26364257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 257
Target Start/End: Original strand, 35369495 - 35369631
Alignment:
Q  116 ctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctact 215  Q
    |||| |||||||| |||||||||||||||||||||||||| |    ||||  || |||||| ||||| ||| ||  |  |||||||||||||||||||||    
T  35369495 ctcttcaattcaccatcaatgagttctttacaaagagataga----gttt-taagaaattagtttcatcaagctcaccaagaacaaacctaatttctact 35369589  T
Q  216 cttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    | |||| |||| || | | || ||||||| ||||||||||||    
T  35369590 catttcccaatgtcttgcaatgaacaagacactcaatgattt 35369631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 36463429 - 36463598
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||| |||| |||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  ||  |||||  |||    
T  36463429 agagattgatctctccaatccactgtcaaagagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaacagccct 36463527  T
Q  206 aatttcta-ctcttttctcaatctcctcccataaacaagagactcaatg-atttcactcgcccaatgtgttt 275  Q
    |||||||| |  ||||| |||||| | || || ||||||| |||||||| ||||||||| ||||| ||||||    
T  36463528 aatttctatccattttcccaatct-caccaatgaacaagacactcaatgaatttcactcacccaaggtgttt 36463598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 177
Target Start/End: Complemental strand, 51337192 - 51337122
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattat 177  Q
    ||||||| ||||||| ||| |||||||||||||||| ||| |||||||||||||| | ||| ||||||||||    
T  51337192 agagattgatctctctaatacactatcaatgagttc-ttaaaaagagatacaaaagggttataataaattat 51337122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 52095402 - 52095571
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| ||||||||| || ||| |||||||||||||||||  | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  52095402 agagattgatctctccaatccactatcaaagatttc-ttacaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaaccct 52095500  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  52095501 aatttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 52095571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 95 - 220
Target Start/End: Original strand, 5207871 - 5207996
Alignment:
Q  95 tactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcat 194  Q
    |||| ||||| ||||||| |||| |||||| |||||||||||||||| ||||||| ||||| | || | || ||||||||||  ||||||||  |  ||     
T  5207871 tactctgggagagagattgatctttccaatccactatcaatgagttc-ttacaaatagatatacaagggttgcaataaattagcttcaacaagttcacaa 5207969  T
Q  195 agaacaaa-cctaatttctactctttt 220  Q
    |||||||| |||||||||||| |||||    
T  5207970 agaacaaaccctaatttctaccctttt 5207996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 5370123 - 5370192
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    ||||||| ||||||| | | |||||||||||||||| |||||||||||||||||| | |||||| ||||||    
T  5370123 agagattgatctctctagtccactatcaatgagttc-ttacaaagagatacaaaagggttacaagaaatta 5370192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 44967869 - 44968038
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cc 204  Q
    ||||||| ||| ||| |||  ||| |||| ||||| |||||||||||||||||| || |||||| |||||   |||| ||| || ||  ||| |||| ||    
T  44967869 agagattgatccctctaatctactctcaacgagttttttacaaagagatacaaa-tggttacaagaaattggcttcagcaagctctccaagagcaaaacc 44967967  T
Q  205 taatttctactcttttctcaatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttt 275  Q
    ||||||||||  ||||| ||||||| |||||  ||||| || ||||||||||||||||  ||||| |||||    
T  44967968 taatttctaccattttcccaatctcttcccaagaacaacaggctcaatgatttcactcaaccaatttgttt 44968038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 95 - 187
Target Start/End: Original strand, 37754989 - 37755081
Alignment:
Q  95 tactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaa 187  Q
    |||||||||  ||||||| |||||| |||  || |||||||||||| |||| ||||||||| |||| | |||||| ||||||| |||| ||||    
T  37754989 tactatgggggagagattgatctcttcaaaccattatcaatgagttttttagaaagagataaaaaaaggttacaagaaattatcttcaccaaa 37755081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 41639554 - 41639447
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| ||||||| |||||||| ||||||| |||||||||  | |||||| ||||||  ||||| ||  |  || ||||||| |||    
T  41639554 agagattgatctctccaatccactatcgatgagttc-ttacaaatagatacaaatgggttacaagaaattagcttcaaaaagttcacaaagaacaaccct 41639456  T
Q  206 aatttctac 214  Q
    |||||||||    
T  41639455 aatttctac 41639447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 46147431 - 46147538
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| || |||||||| ||||||||| |||||||| |||||||||||||||    |||||| ||||||  |||||||| ||  ||  |||||| |||    
T  46147431 agagattgatgtctccaatccactatcaaagagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaatgaacaaccct 46147529  T
Q  206 aatttctac 214  Q
    |||||||||    
T  46147530 aatttctac 46147538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 52467394 - 52467501
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||  |||| || |||||| ||||||||  | |||||| | ||||  |||||||| ||  || |||||||||||    
T  52467394 agagattgatctctccaatccactatcaaaaagttatt-acaaagtgatacaaatgggttacaagatattagcttcaacaagctcacaaagaacaaacct 52467492  T
Q  206 aatttctac 214  Q
    |||||||||    
T  52467493 aatttctac 52467501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 100 - 159
Target Start/End: Complemental strand, 29254628 - 29254570
Alignment:
Q  100 tgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 159  Q
    ||||| ||||||| ||||||||||| ||||||||| |||||| ||||||||||| |||||    
T  29254628 tgggagagagattgatctctccaatccactatcaacgagttc-ttacaaagagacacaaa 29254570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 229
Target Start/End: Original strand, 29999846 - 29999969
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| ||||||||||||||||||   ||| ||||||||||   |||||| ||||||  ||  |||   |  || ||||||| |||    
T  29999846 agagattgatctctccaatccactatcaatgagttcttacaaaaaagatacaaaagagttacaagaaattagctttgacatgttcacaaagaacaaccct 29999945  T
Q  206 aatttctactcttttctcaatctc 229  Q
    ||||||||| |||||| |||||||    
T  29999946 aatttctacccttttcccaatctc 29999969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 50262743 - 50262845
Alignment:
Q  108 agatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaa 207  Q
    ||||| || ||||||||  ||||||||||||||||| |||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| | |||    
T  50262743 agattgatatctccaatcaactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccgtaa 50262841  T
Q  208 tttc 211  Q
    ||||    
T  50262842 tttc 50262845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 158
Target Start/End: Complemental strand, 8832296 - 8832254
Alignment:
Q  116 ctctccaattcactatcaatgagttctttacaaagagatacaa 158  Q
    |||| ||||||||||||||| ||||||||||||| ||||||||    
T  8832296 ctcttcaattcactatcaataagttctttacaaatagatacaa 8832254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 12739590 - 12739659
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    ||||||| ||||||||||| ||||||||||||||||  |||||| |||||||||  | |||||| ||||||    
T  12739590 agagattgatctctccaatccactatcaatgagttc-atacaaatagatacaaatgggttacaagaaatta 12739659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 12747796 - 12747865
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    ||||||| ||||||||||| ||||||||||||||||  |||||| |||||||||  | |||||| ||||||    
T  12747796 agagattgatctctccaatccactatcaatgagttc-atacaaatagatacaaatgggttacaagaaatta 12747865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 35370096 - 35370142
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagag 152  Q
    |||||| || |||| |||||||| |||||||||||||||||||||||    
T  35370096 agagatctacctcttcaattcaccatcaatgagttctttacaaagag 35370142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 37229761 - 37229814
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 160  Q
    ||||||| ||||||||||| |||||| ||||||||| ||||||||||||| ||||    
T  37229761 agagattgatctctccaatccactataaatgagttc-ttacaaagagatataaaa 37229814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 52065718 - 52065672
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaa 160  Q
    ||||||||| |||||||||||||||||  | ||||||||||||||||    
T  52065718 atctctccacttcactatcaatgagtttctaacaaagagatacaaaa 52065672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 159
Target Start/End: Complemental strand, 5350031 - 5349986
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaa 159  Q
    ||||||||  |||| |||||| ||||||||||||||||||||||||    
T  5350031 atctctccgcttcattatcaacgagttctttacaaagagatacaaa 5349986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 159
Target Start/End: Original strand, 13009492 - 13009536
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaa 159  Q
    ||||||||||| |||||||||||||||| |||||||| ||||||||    
T  13009492 atctctccaatccactatcaatgagttc-ttacaaagggatacaaa 13009536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 159
Target Start/End: Original strand, 45687230 - 45687274
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaa 159  Q
    ||||||||||| |||||||||||||||| ||||||| |||||||||    
T  45687230 atctctccaatccactatcaatgagttc-ttacaaatagatacaaa 45687274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 213
Target Start/End: Original strand, 48142440 - 48142525
Alignment:
Q  129 tatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cctaatttcta 213  Q
    ||||||||||||||||||||||||||| | || | |||||| ||| ||  |||||||| ||  || |||||||| |||||||||||    
T  48142440 tatcaatgagttctttacaaagagatatacaagggttacaagaaactagcttcaacaagctcacaaagaacaaaccctaatttcta 48142525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 158
Target Start/End: Complemental strand, 19222420 - 19222384
Alignment:
Q  122 aattcactatcaatgagttctttacaaagagatacaa 158  Q
    |||| |||||||||||||| |||||||||||||||||    
T  19222420 aatttactatcaatgagttatttacaaagagatacaa 19222384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 74; Significance: 6e-34; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 61 - 258
Target Start/End: Original strand, 30218039 - 30218236
Alignment:
Q  61 aaaaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 160  Q
    |||||| |||||  |||||||||||| ||||| ||||| ||||  || |||| |||| | |||  |||||||||||| || |||||||||||||||||||    
T  30218039 aaaaatgtttaccgagttcagtccaacaatgacttactctgggggagtgattgatcttttcaacccactatcaatgaattatttacaaagagatacaaaa 30218138  T
Q  161 tgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctcaatctcctcccataaacaagagactcaatgatttc 258  Q
    || |||||| ||||||  ||||| || || ||  ||||||||||||| |||||| | |||||||||||||| |||| ||||||| |||||||||||||    
T  30218139 tggttacaagaaattagcttcaataagctctccaagaacaaacctaacttctacccatttctcaatctccttccatgaacaagacactcaatgatttc 30218236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 22 - 257
Target Start/End: Complemental strand, 33648383 - 33648148
Alignment:
Q  22 aacaagataaagagggtggagaaaagagaacaacacatcaa-aaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctc 120  Q
    |||||||||||||| || ||||||||| ||||||||  ||| |||| ||||| |||||| |||||| |||||  |||| |||   ||||||| |||||||    
T  33648383 aacaagataaagagagtagagaaaagacaacaacac--caataaatgtttacccagttcggtccaacaatgacctactctggaggagagattgatctctc 33648286  T
Q  121 caattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cctaatttctactcttt 219  Q
    |||| | |||||||||||||||||||||||| |||||||| | |||||  ||||||  |||||||| ||  || |||||||| |||||||| |||  |||    
T  33648285 caatccgctatcaatgagttctttacaaagaaatacaaaagggttacaggaaattagcttcaacaagctcacaaagaacaaaccctaatttttaccattt 33648186  T
Q  220 tctcaatctcctcccataaacaagagactcaatgattt 257  Q
    ||||||||||||| |||  |||||| ||||||| ||||    
T  33648185 tctcaatctcctctcatgtacaagacactcaattattt 33648148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 101 - 263
Target Start/End: Original strand, 42261520 - 42261685
Alignment:
Q  101 gggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaaca 200  Q
    |||| ||||| | ||||||||  |||||||||||||||| ||||||||||| ||||||||   |||||| ||||||  |||||||| || ||  ||||||    
T  42261520 gggagagagaatgatctctccgcttcactatcaatgagtactttacaaagatatacaaaagagttacaagaaattagcttcaacaagctctccaagaaca 42261619  T
Q  201 aacctaatttctactcttttctcaatctcctcc---cataaacaagagactcaatgatttcactcg 263  Q
    ||| ||||||||||  |||||||||||||||||   ||| ||||||||||||||||| ||||||||    
T  42261620 aacttaatttctacgattttctcaatctcctcctttcatgaacaagagactcaatgagttcactcg 42261685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 74 - 205
Target Start/End: Complemental strand, 24398218 - 24398087
Alignment:
Q  74 cagttcagtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaa 173  Q
    |||||| |||||| |||||  |||||||||  ||||||| ||||||||||| || |||||||||||||||||||||||||||||||| | |||||| |||    
T  24398218 cagttcggtccaacaatgacctactatgggggagagattgatctctccaatccattatcaatgagttctttacaaagagatacaaaagggttacaagaaa 24398119  T
Q  174 ttattttcaacaaactatcatagaacaaacct 205  Q
    |||  |||||||| ||  || |||||||||||    
T  24398118 ttagcttcaacaagctcacaaagaacaaacct 24398087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 36318049 - 36318218
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||||||||||||  | ||||||||||||| ||||||||| ||  || ||||||| |||    
T  36318049 agagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaataaattagtttcaacaagctcacaaagaacaaccct 36318147  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | ||||  |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  36318148 aatttctacccatttttccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 36318218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 106 - 257
Target Start/End: Original strand, 5723296 - 5723445
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  5723296 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaaaggttacaagaaattagctttgacaagttcacaaagaacaagcct 5723394  T
Q  206 aatttctactcttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    ||||||||| ||||||||||||| | || || ||||||| ||||||||||||    
T  5723395 aatttctacccttttctcaatct-caccaatgaacaagacactcaatgattt 5723445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 106 - 257
Target Start/End: Original strand, 36988116 - 36988266
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||   |||||| |||||| |||  |||| ||  |||||||||| |||    
T  36988116 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagagttacaagaaattagttttgacaagctcacatagaacaaccct 36988214  T
Q  206 aatttctactcttttct-caatctcctcccataaacaagagactcaatgattt 257  Q
    ||||||||| ||||| | ||||| || || || ||||||| ||||||||||||    
T  36988215 aatttctacccttttttccaatc-ccaccaatgaacaagacactcaatgattt 36988266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 95 - 267
Target Start/End: Original strand, 42019899 - 42020073
Alignment:
Q  95 tactatgggaaagagatttatctctccaattcactatcaatgag--ttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatc 192  Q
    ||||||||| |||||||| ||||||| |||||||||||||||||  || |||||||||||||||||||   |||||| ||||||  ||| |||| || |     
T  42019899 tactatggggaagagattgatctctcaaattcactatcaatgagttttttttacaaagagatacaaaagagttacaagaaattagcttctacaagcttta 42019998  T
Q  193 atagaacaaacctaatttctactcttttctcaatctcctcccataaacaagagactcaatgatttcactcgccca 267  Q
      ||||||||| ||| |||||| |||||   |||||| |||||  || || ||||||||||||||||||| ||||    
T  42019999 taagaacaaacataaattctaccctttttctaatctcttcccaagaaaaatagactcaatgatttcactcaccca 42020073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 106 - 257
Target Start/End: Complemental strand, 38312368 - 38312218
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| ||||||||||||| || |||||||||||||||||  | |||||| |||||| |||||||||  |  || ||||||| |||    
T  38312368 agagattgatctctccaatccactatcaatgagatc-ttacaaagagatacaaatgggttacaagaaattagtttcaacaagttcacaaagaacaaccct 38312270  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||||||    
T  38312269 aatttctacccattttcccaatct-caccaatgaacaagacactcaatgattt 38312218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 63 - 229
Target Start/End: Original strand, 7815272 - 7815436
Alignment:
Q  63 aaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatg 162  Q
    |||||||||| ||||||||||||||  |||| ||||||| | | |||||| ||||||||||| |||||| ||||||||| ||||||||||||||||||      
T  7815272 aaatatttacccagttcagtccaatt-tgatatactatgtgga-gagattaatctctccaatccactataaatgagttc-ttacaaagagatacaaaaga 7815368  T
Q  163 tttacaataaattattttcaacaaactatcatagaacaaa-cctaatttctactcttttctcaatctc 229  Q
     |||||| ||||||  |||||||| ||   | |||||||| ||||||||| ||  |||||||||||||    
T  7815369 gttacaagaaattagcttcaacaagcttctaaagaacaaaccctaatttcaacctttttctcaatctc 7815436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 17057409 - 17057578
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||    |||||| ||||||  |||||||| ||  || ||||||| |||    
T  17057409 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgagttacaaaaaattagcttcaacaagcttgcaaagaacaaccct 17057507  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | ||||  |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  17057508 aatttctacccatttttccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 17057578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 17085392 - 17085561
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||    |||||| ||||||  |||||||| ||  || ||||||| |||    
T  17085392 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgagttacaaaaaattagcttcaacaagcttgcaaagaacaaccct 17085490  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | ||||  |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  17085491 aatttctacccatttttccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 17085561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 723784 - 723891
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||| ||||||||  | |||||| ||||||  || ||||| ||  || |||||||||||    
T  723784 agagattgatctctccaatccactatcaatgagttc-ttacaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacct 723882  T
Q  206 aatttctac 214  Q
    |||||||||    
T  723883 aatttctac 723891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 13121895 - 13121728
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cc 204  Q
    ||||||| || ||| |||| ||||||||||||||| | ||||||||||||||||  | |||||| ||||||| |||||||| ||  || |||||||| ||    
T  13121895 agagattgatttcttcaatccactatcaatgagtt-tctacaaagagatacaaa--ggttacaagaaattatcttcaacaagctcacaaagaacaaaccc 13121799  T
Q  205 taatttctactcttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||||  ||||| || ||| | || || ||||||| ||||||||| |||||||| ||||||||||||    
T  13121798 taatttctaccattttcccagtct-caccaatgaacaagacactcaatgattttcactcacccaatgtgttt 13121728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 114 - 229
Target Start/End: Complemental strand, 26353304 - 26353189
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacc-taatttct 212  Q
    ||||||||||| |||||||||||||| ||| ||||| ||||||||||   |||||| ||||||  |||||||||||  || |||||||||| ||||||||    
T  26353304 atctctccaatccactatcaatgagtactt-acaaaaagatacaaaagtgttacaagaaattagcttcaacaaactcacaaagaacaaaccttaatttct 26353206  T
Q  213 actcttttctcaatctc 229  Q
    || ||||| ||||||||    
T  26353205 acacttttttcaatctc 26353189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 45727057 - 45726950
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || |||||||  ||    
T  45727057 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaataggttacaagaaattagcttcaacaagctcacaaagaacaactct 45726959  T
Q  206 aatttctac 214  Q
    |||||||||    
T  45726958 aatttctac 45726950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 114 - 275
Target Start/End: Complemental strand, 42362472 - 42362311
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 213  Q
    ||||||||||| |||||||||||||||| |||||||| ||||||||  | |||||| ||||||  || ||||| ||  || |||||||||||||||||||    
T  42362472 atctctccaatccactatcaatgagttc-ttacaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttcta 42362374  T
Q  214 ctc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    | | ||||| |||||| | |  || ||||||| ||||||||| |||||||| ||||| ||||||    
T  42362373 cccattttcccaatct-cacaaatgaacaagacactcaatgattttcactcacccaaggtgttt 42362311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 1631772 - 1631879
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| || |||||||| |||||||||||||||| |||||||||||||||||  | |||||| | ||||  |||||||| ||  || ||||||| |||    
T  1631772 agagattgatttctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagatattagcttcaacaagctcacaaagaacaatcct 1631870  T
Q  206 aatttctac 214  Q
    |||||||||    
T  1631871 aatttctac 1631879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 257
Target Start/End: Original strand, 2334458 - 2334608
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||   |||| | ||||||  ||||||||  |  || ||||||| |||    
T  2334458 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagagttactagaaattagcttcaacaagttcacaaagaacaaccct 2334556  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
     |||||||| | ||||| |||||| | || || ||||||| ||||||||||||    
T  2334557 tatttctacccattttcccaatct-caccaatgaacaagacactcaatgattt 2334608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 6595046 - 6595153
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| ||||||||| |||||| |||||||||||| ||||| | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  6595046 agagattgatctctccaatccactatcaacgagttc-ttacaaagagattcaaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccct 6595144  T
Q  206 aatttctac 214  Q
    |||||||||    
T  6595145 aatttctac 6595153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 33162490 - 33162597
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||| ||| |||||||||||||||| ||||| |||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  33162490 agagattgatctctctaatccactatcaatgagttc-ttacagagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccct 33162588  T
Q  206 aatttctac 214  Q
    |||||||||    
T  33162589 aatttctac 33162597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 114 - 214
Target Start/End: Original strand, 35446932 - 35447031
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 213  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||||||||||    
T  35446932 atctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagattcaacaagatcacaaagaacaaccctaatttcta 35447030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 29867997 - 29867828
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| ||||||||| |||||| |||||||||||||||||  | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  29867997 agagattgatctctccaatccactatcaaagagttc-ttacaaagagatacaaatgggttacaagaaattagctttgacaagttcacaaagaacaaccct 29867899  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  29867898 aatttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 29867828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 34139810 - 34139980
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| ||||||||||||||||||   |||| |||||| |  | |||||| ||||||  || ||||| ||  || ||||||| |||    
T  34139810 agagattgatctctccaatccactatcaatgagttcttacaaaagggatacatatgggttacaagaaattagcttaaacaagctcacaaagaacaaccct 34139909  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | |||||||||||||  |  || ||||||| ||||||||| |||||||| ||||| ||||||    
T  34139910 aatttctacccattttctcaatctca-caaatgaacaagacactcaatgattttcactcacccaaggtgttt 34139980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 36773690 - 36773521
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| ||||||||| |||||| |||||||||||||||||    |||||| ||||||  |||||||| ||  || ||||||| |||    
T  36773690 agagattgatctctccaatccactatcaaagagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccct 36773592  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||| | | | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  36773591 aatttattcccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 36773521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 4484370 - 4484487
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| | ||||||||| ||||||||||||||||||   |||||||||||||| | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  4484370 agagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccct 4484469  T
Q  206 aatttctactcttttctc 223  Q
    ||||||||| ||||||||    
T  4484470 aatttctacccttttctc 4484487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 223
Target Start/End: Complemental strand, 30833474 - 30833357
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| | ||||||||| ||||||||||||||||||   |||||||||||||| | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  30833474 agagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaagggttacaagaaattaactttgacaagttcacaaagaacaaccct 30833375  T
Q  206 aatttctactcttttctc 223  Q
    ||||||||| ||||||||    
T  30833374 aatttctacccttttctc 30833357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 130 - 257
Target Start/End: Original strand, 7597074 - 7597202
Alignment:
Q  130 atcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cctaatttctactcttttctcaatct 228  Q
    |||||||||||||||||||| ||||||||||   |||||| |||||| |||| ||||  |   |  ||||||| ||||||||||| || |||||||||||    
T  7597074 atcaatgagttctttacaaaaagatacaaaagacttacaagaaattagtttcgacaagttcataaggaacaaaacctaatttctattcatttctcaatct 7597173  T
Q  229 cctcccataaacaagagactcaatgattt 257  Q
    | |||||| ||||||| ||| | ||||||    
T  7597174 cttcccatgaacaagacactgagtgattt 7597202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 114 - 214
Target Start/End: Complemental strand, 41446260 - 41446160
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 213  Q
    ||||||||| |||||| ||||  ||||||||| |||||||||||||| | ||||   ||||||  |||||||| || ||| ||||||||| |||||||||    
T  41446260 atctctccacttcactgtcaaccagttctttataaagagatacaaaagggttacttaaaattagcttcaacaagctctcaaagaacaaacataatttcta 41446161  T
Q  214 c 214  Q
    |    
T  41446160 c 41446160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 42288150 - 42288257
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| || |||||||||| |||| ||||||| |||||||  | |||||||||||||  |||||||| ||  || ||||||| | |    
T  42288150 agagattgatctctccaatccattatcaatgagctctt-acaaagaaatacaaatgggttacaataaattagcttcaacaagctcacaaagaacaacctt 42288248  T
Q  206 aatttctac 214  Q
    |||||||||    
T  42288249 aatttctac 42288257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 257
Target Start/End: Original strand, 4503173 - 4503323
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| | ||||||||| ||||||||||||||||||  |||||||||||||||   |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  4503173 agagattgaactctccaatccactatcaatgagttctt--caaagagatacaaaagagttacaagaaattagctttgacaagttcacaaagaacaaccct 4503270  T
Q  206 aatttctac--tcttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    |||||||||  | ||||| |||||| |||| || ||||||| ||||||||||||    
T  4503271 aatttctaccattttttcccaatct-ctccaatgaacaagacactcaatgattt 4503323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 275
Target Start/End: Original strand, 11151639 - 11151800
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 213  Q
    ||||||||||| ||||||| | |||||||| |||||| ||||||||  | |||||| ||||||  || ||||| ||  || |||||||| ||||||||||    
T  11151639 atctctccaatccactatctaagagttctt-acaaagtgatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaatctaatttcta 11151737  T
Q  214 ctc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    | | ||||| |||| | | || || ||||||||||||||||| |||||||| ||||| ||||||    
T  11151738 cccattttcccaat-ttcaccaatgaacaagagactcaatgattttcactcacccaaggtgttt 11151800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 275
Target Start/End: Complemental strand, 11690621 - 11690460
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 213  Q
    ||||||||||| ||||||||| || ||||| |||||| ||||||||  | |||||| ||||||  || ||||| ||  || |||||||||||||||||||    
T  11690621 atctctccaatccactatcaacgatttctt-acaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacctaatttcta 11690523  T
Q  214 ctc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    | | ||||| |||||| | |  || ||||||| ||||||||| |||||||| ||||| ||||||    
T  11690522 cccattttcccaatct-cacaaatgaacaagacactcaatgattttcactcacccaaggtgttt 11690460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 42261749 - 42261817
Alignment:
Q  198 acaaacctaatttctactcttttctcaatctcctcc---cataaacaagagactcaatgatttcactcg 263  Q
    |||||||||||||||||  ||||||||||||||| |   ||| ||||||||||||||||| ||||||||    
T  42261749 acaaacctaatttctacgattttctcaatctccttctttcatgaacaagagactcaatgagttcactcg 42261817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 262
Target Start/End: Complemental strand, 28672059 - 28671902
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaac-aaacc 204  Q
    ||||||| ||||||||||| |||| ||| ||||||||||  |||||||||||||| | | |||| ||||||   | |||||  |||   | ||| |||||    
T  28672059 agagattgatctctccaatccactgtcagtgagttctttgtaaagagatacaaaacggtaacaagaaattaaccttaacaagttatataaaaacaaaacc 28671960  T
Q  205 taatttctactcttttctcaatctcctcccataaacaagagactcaatgatttcactc 262  Q
    ||||||||||  ||||  |||| || |||||  ||||||||||||||| |||||||||    
T  28671959 taatttctacaatttttccaatatcttcccaagaacaagagactcaataatttcactc 28671902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 14633865 - 14633973
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| ||||||| ||||||||||   |||| ||||||||  | |||||| ||||||  || ||||| ||  || ||||||| |||    
T  14633865 agagattgatctctccaatccactatctatgagttcttacaaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaatcct 14633964  T
Q  206 aatttctac 214  Q
    |||||||||    
T  14633965 aatttctac 14633973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 17490188 - 17490267
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 186  Q
    ||||||| |||||| |||| |||||||||||||||| |||||||||| |||||||   |||||| ||||||  ||||||||    
T  17490188 agagattgatctctacaatccactatcaatgagttc-ttacaaagagttacaaaagagttacaagaaattagcttcaacaa 17490267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 214
Target Start/End: Complemental strand, 41454355 - 41454255
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 213  Q
    |||| |||| |||||||||||||||||||||||||| | ||||||||   || | | ||||||  |||||||| || ||| | |||||| ||||||||||    
T  41454355 atctgtccacttcactatcaatgagttctttacaaatatatacaaaagagttgctagaaattagcttcaacaagctctcaaaaaacaaatctaatttcta 41454256  T
Q  214 c 214  Q
    |    
T  41454255 c 41454255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 221
Target Start/End: Complemental strand, 32289692 - 32289577
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||| |||| |||||||||||||||||   ||||||||||||||   |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  32289692 agagattgatctctctaatttactatcaatgagttcttacaaaagagatacaaaagagttacaagaaattagatttgacaagttcacaaagaacaaccct 32289593  T
Q  206 aatttctactcttttc 221  Q
    ||||||||| ||||||    
T  32289592 aatttctacccttttc 32289577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 45099882 - 45099830
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 160  Q
    ||||||| | ||||||||| ||||||||||||||||||  |||||||||||||||    
T  45099882 agagattgaactctccaatccactatcaatgagttctt--caaagagatacaaaa 45099830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 211 - 257
Target Start/End: Complemental strand, 5868474 - 5868428
Alignment:
Q  211 ctactcttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    |||||| ||||||| |||| |||| ||||||||||||||||||||||    
T  5868474 ctactcatttctcagtctcttcccttaaacaagagactcaatgattt 5868428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 34811279 - 34811341
Alignment:
Q  124 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 186  Q
    |||||||||||||||||  ||||||||||||| ||||   |||||||||||||  ||||||||    
T  34811279 ttcactatcaatgagtttcttacaaagagatataaaagagttacaataaattagcttcaacaa 34811341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 213
Target Start/End: Complemental strand, 4561199 - 4561110
Alignment:
Q  124 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 213  Q
    ||||||| |||||| || |||||||||||||||||||   |||||| ||||||  ||||||||  | ||||| |  ||||||||||||||    
T  4561199 ttcactaacaatgaattttttacaaagagatacaaaaatgttacaagaaattagcttcaacaatatctcataaacaaaacctaatttcta 4561110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 7451246 - 7451194
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 159  Q
    ||||||| |||||| |||| |||||||||||||||  |||||||||||||||||    
T  7451246 agagattgatctctgcaatccactatcaatgagtt-attacaaagagatacaaa 7451194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 8e-30; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 106 - 268
Target Start/End: Complemental strand, 25073697 - 25073535
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| || |||| ||| |||||||||||||||||||||| |||||||||||| | |||||||||| ||  || ||||| ||  |  |||| ||| ||    
T  25073697 agagattgatttctctaatccactatcaatgagttctttacatagagatacaaaagggttacaataaaatagctttaacaagctcacgaagaataaatct 25073598  T
Q  206 aatttctactcttttctcaatctcctcccataaacaagagactcaatgatttcactcgcccaa 268  Q
    |||||||||  |||| ||||||||||||||| ||||||| ||||||||||||||||| |||||    
T  25073597 aatttctaccattttttcaatctcctcccatgaacaagatactcaatgatttcactcacccaa 25073535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 22 - 229
Target Start/End: Complemental strand, 5043838 - 5043632
Alignment:
Q  22 aacaagataaagagggtggagaaaagagaacaacacatcaa-aaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctc 120  Q
    |||||||||||||| ||  |||||||| ||||||||  ||| |||| || || |||||| |||||| |||||  ||||||||   ||||||| |||||||    
T  5043838 aacaagataaagagagtaaagaaaagataacaacac--caagaaatgttcacccagttcggtccaacaatgacctactatggaggagagattgatctctc 5043741  T
Q  121 caattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactc-ttt 219  Q
    ||||  ||||||||||||||| |||||||||||||||||    |||||| ||||||  |||||||| ||  || |||||||||||||||||||||| |||    
T  5043740 caatctactatcaatgagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaacctaatttctactcattt 5043642  T
Q  220 tctcaatctc 229  Q
    ||||||||||    
T  5043641 tctcaatctc 5043632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 114 - 257
Target Start/End: Complemental strand, 4045544 - 4045401
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cctaatttct 212  Q
    ||||||||||| ||||||||||||||| |||||||||||||| |||||| |||||| ||||||  |||||||| ||   | |||||||| ||||||||||    
T  4045544 atctctccaatccactatcaatgagttatttacaaagagatataaaatgattacaagaaattagcttcaacaagctcataaagaacaaaccctaatttct 4045445  T
Q  213 actcttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    ||  ||||| |||||| |||| |||||||||| ||||||||||||    
T  4045444 accattttcccaatct-ctccaataaacaagacactcaatgattt 4045401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 9183071 - 9183240
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||| |  || ||||||| |||    
T  9183071 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaaattcacaaagaacaaccct 9183169  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | |||||||||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  9183170 aatttctacccattttctcaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 9183240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 3808748 - 3808856
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaat-gtttacaataaattattttcaacaaactatcatagaacaaacc 204  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||| | |||||| |||||| ||||||||| ||  || ||||||| ||    
T  3808748 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaccc 3808846  T
Q  205 taatttctac 214  Q
    ||||||||||    
T  3808847 taatttctac 3808856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 2972979 - 2973086
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||||||||||||  | |||||| ||||||  |||||||| ||  || |||||||||||    
T  2972979 agagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaacct 2973077  T
Q  206 aatttctac 214  Q
    |||||||||    
T  2973078 aatttctac 2973086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 21589059 - 21588952
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  21589059 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccct 21588961  T
Q  206 aatttctac 214  Q
    |||||||||    
T  21588960 aatttctac 21588952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 21593792 - 21593685
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  21593792 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccct 21593694  T
Q  206 aatttctac 214  Q
    |||||||||    
T  21593693 aatttctac 21593685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 257
Target Start/End: Original strand, 5406240 - 5406389
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  5406240 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccct 5406338  T
Q  206 aatttctactcttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    |||||||||  ||||| |||||| | || || ||||||| ||||||||||||    
T  5406339 aatttctaccattttcccaatct-caccaatgaacaagacactcaatgattt 5406389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 257
Target Start/End: Original strand, 5410565 - 5410714
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  5410565 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccct 5410663  T
Q  206 aatttctactcttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    |||||||||  ||||| |||||| | || || ||||||| ||||||||||||    
T  5410664 aatttctaccattttcccaatct-caccaatgaacaagacactcaatgattt 5410714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 257
Target Start/End: Original strand, 5413434 - 5413583
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  5413434 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagggttacaagaaattagctttgacaagttcgcaaagaacaaccct 5413532  T
Q  206 aatttctactcttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    |||||||||  ||||| |||||| | || || ||||||| ||||||||||||    
T  5413533 aatttctacctttttcccaatct-caccaatgaacaagacactcaatgattt 5413583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 107 - 214
Target Start/End: Complemental strand, 17758150 - 17758044
Alignment:
Q  107 gagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaaccta 206  Q
    |||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| ||||    
T  17758150 gagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaacccta 17758052  T
Q  207 atttctac 214  Q
    ||||||||    
T  17758051 atttctac 17758044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 26830163 - 26830270
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || |||||||  ||    
T  26830163 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatggattacaagaaattagcttcaacaagctcacaaagaacaactct 26830261  T
Q  206 aatttctac 214  Q
    |||||||||    
T  26830262 aatttctac 26830270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 28137448 - 28137617
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||| |||||||  | |||||| ||||||  || ||||| ||  || ||||||| |||    
T  28137448 agagattgatctctccaatccactatcaatgagttc-ttacaaagaaatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccct 28137546  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | ||||| || ||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  28137547 aatttctacccattttcccattct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 28137617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 229
Target Start/End: Original strand, 31404715 - 31404837
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  31404715 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccct 31404813  T
Q  206 aatttctactcttttctcaatctc 229  Q
    |||||||||  ||||| |||||||    
T  31404814 aatttctaccattttcccaatctc 31404837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 5409109 - 5409162
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 160  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  5409109 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaa 5409162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 229
Target Start/End: Complemental strand, 17763118 - 17762995
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||| ||||||| |||||||||||||||| || |||| |||||||||    |||||| ||||||  |||||||| ||  || ||||||| |||    
T  17763118 agagattgatcactccaatccactatcaatgagttc-ttccaaaaagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccct 17763020  T
Q  206 aatttctactc-ttttctcaatctc 229  Q
    ||||||||| | |||||||||||||    
T  17763019 aatttctacccattttctcaatctc 17762995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 210
Target Start/End: Original strand, 26954326 - 26954429
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||| |    |||||| ||||||  |||||||| ||  || ||||||| |||    
T  26954326 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacagatgagttacaagaaattagcttcaacaagctcacaaagaacaaccct 26954424  T
Q  206 aattt 210  Q
    |||||    
T  26954425 aattt 26954429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 3072799 - 3072853
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 160  Q
    ||||||| | ||||||||||||||||||||||||||||   ||||||||||||||    
T  3072799 agagattgaactctccaattcactatcaatgagttcttacaaaagagatacaaaa 3072853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 186
Target Start/End: Original strand, 5740055 - 5740117
Alignment:
Q  124 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 186  Q
    |||| ||||| | ||||||||||||||| |||||||| ||||||||||||||  |||||||||    
T  5740055 ttcattatcagtaagttctttacaaagaaatacaaaaggtttacaataaattggtttcaacaa 5740117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 30834576 - 30834645
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    ||||||| | ||||||||| |||||||||||||||| || ||||||||||||||| | |||||| ||||||    
T  30834576 agagattgaactctccaatccactatcaatgagttc-ttccaaagagatacaaaagggttacaagaaatta 30834645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 33160392 - 33160445
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 160  Q
    ||||||| ||||||||||| ||| |||||||||||| ||||||||||||||||||    
T  33160392 agagattgatctctccaatccaccatcaatgagttc-ttacaaagagatacaaaa 33160445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 2171572 - 2171624
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 159  Q
    ||||||| | ||||||||| |||||||||||||||| |||||||||||||||||    
T  2171572 agagattgaactctccaatccactatcaatgagttc-ttacaaagagatacaaa 2171624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 214
Target Start/End: Original strand, 22424783 - 22424974
Alignment:
Q  22 aacaagataaagagggtggagaaaagagaacaacacatcaa-aaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctc 120  Q
    |||||||||||||| || ||||||||| ||||||||  ||| |||| || || |||| | |||||| |||||  |||| ||    ||||||| |||||||    
T  22424783 aacaagataaagagagtagagaaaagataacaacac--caagaaatgttcacccagtacggtccaacaatgacctactctgaaggagagattgatctctc 22424880  T
Q  121 caattcactatcaatgagttctttacaaagagatacaaaa--tgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctac 214  Q
    |||| |||||| ||||||||| ||||||||||||||||||   | |||||| ||||||  || ||||| ||  || ||||||| ||||||||||||    
T  22424881 caatccactat-aatgagttc-ttacaaagagatacaaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttctac 22424974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 22 - 161
Target Start/End: Complemental strand, 26800798 - 26800662
Alignment:
Q  22 aacaagataaagagggtggagaaaagagaacaacacatcaa-aaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctc 120  Q
    ||||||||||| || || ||||||||| ||||||||  ||| |||| || |  |||||| |||||| |||||  |||| |||   ||||||| |||||||    
T  26800798 aacaagataaaaagagtagagaaaagataacaacac--caagaaatgttcatccagttcggtccaacaatgacctactctggaggagagattgatctctc 26800701  T
Q  121 caattcactatcaatgagttctttacaaagagatacaaaat 161  Q
    |||| |||||| ||||||||||| |||||||||||||||||    
T  26800700 caatccactat-aatgagttctt-acaaagagatacaaaat 26800662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 603128 - 603207
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 186  Q
    ||||||| || |||||||| ||||||||| |||||||| |||||||||||||||  | |||||| ||||||  ||||||||    
T  603128 agagattgatttctccaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaa 603207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 3038943 - 3039050
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||| || |||||| |||||||||||||||||  | |||||| ||||||  ||||| || ||  ||  |||||| |||    
T  3038943 agagattaatctctccaatccactattaaagagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaaaaagctcacaatgaacaaccct 3039041  T
Q  206 aatttctac 214  Q
    |||||||||    
T  3039042 aatttctac 3039050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 118 - 221
Target Start/End: Original strand, 12221155 - 12221258
Alignment:
Q  118 ctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactct 217  Q
    ||||| |||||| ||||| | |||||||||||| |||||||||   |||||| |||||| ||||||| || | |   |||||||||||||||| |||||     
T  12221155 ctccacttcactgtcaattaattctttacaaagtgatacaaaagagttacaaaaaattagtttcaacgaattcttcaagaacaaacctaatttatactca 12221254  T
Q  218 tttc 221  Q
    ||||    
T  12221255 tttc 12221258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 160
Target Start/End: Complemental strand, 2908586 - 2908533
Alignment:
Q  107 gagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 160  Q
    |||||| || ||| |||| |||||||||||||||||||||||  ||||||||||    
T  2908586 gagattgatttcttcaatccactatcaatgagttctttacaataagatacaaaa 2908533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 143
Target Start/End: Complemental strand, 16569150 - 16569113
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctt 143  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  16569150 agagattgatctctccaatccactatcaatgagttctt 16569113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 33211225 - 33211277
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 159  Q
    ||||||| ||||||||||| || ||| ||||||||| |||||||||||||||||    
T  33211225 agagattgatctctccaatccattataaatgagttc-ttacaaagagatacaaa 33211277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 9572719 - 9572667
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaa 158  Q
    ||||||| |||||| |||| ||||||||||| |||||| |||||||| |||||    
T  9572719 agagattgatctctgcaatccactatcaatgggttcttaacaaagagttacaa 9572667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 275
Target Start/End: Original strand, 27428 - 27652
Alignment:
Q  53 aacacatcaa-aaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaaga 151  Q
    |||||||||| |||| |||||  | ||| |||||| |||||  |||||||||  ||||||| ||||||||||| |||||||||| |||| ||||||||||    
T  27428 aacacatcaataaatgtttacctaattcggtccaacaatgacctactatgggggagagattgatctctccaatccactatcaataagttatttacaaaga 27527  T
Q  152 gatacaaaatgtttacaataaattattttcaacaaactatcatagaacaa-acctaatttctactcttttctcaatctcctcccataaacaagagactca 250  Q
    ||||||||    |||||| ||||||  |||||||| || |   ||||||| || ||||||||||||||||| ||||||| ||||   |||||||||||||    
T  27528 gatacaaatgagttacaagaaattagcttcaacaagctcttcaagaacaatacataatttctactcttttcacaatctcttccctagaacaagagactca 27627  T
Q  251 atgatttcactcgcccaatgtgttt 275  Q
    | ||||||||||  |||| ||||||    
T  27628 aagatttcactcatccaaggtgttt 27652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 65; Significance: 1e-28; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 106 - 262
Target Start/End: Original strand, 32902213 - 32902369
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||| |||||||||||||||| ||||||| ||||||||||||||   |||||| ||||||  ||||||| | | ||   |||||||| |    
T  32902213 agagattgatctctcaaattcactatcaatgaattctttagaaagagatacaaaaaagttacaagaaattagcttcaacagagtctccatgaacaaacat 32902312  T
Q  206 aatttctactcttttctcaatctcctcccataaacaagagactcaatgatttcactc 262  Q
    ||||||||| | ||| ||||||||||| ||| | |||||||||||||||||||||||    
T  32902313 aatttctacccatttatcaatctcctctcatgatcaagagactcaatgatttcactc 32902369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 256
Target Start/End: Complemental strand, 7597795 - 7597592
Alignment:
Q  55 cacatcaa-aaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagaga 153  Q
    |||||||| |||||||||  |||||| ||| || |||||  |||||||||  ||||||| ||||||||||| |||||||||||  |||||||||||||||    
T  7597795 cacatcaataaatatttatccagttcggtctaacaatgacctactatgggggagagattgatctctccaatccactatcaatgcattctttacaaagaga 7597696  T
Q  154 tacaaaatgtttacaataaattattttcaacaaactatcatagaac-aaacctaatttctactcttttctcaatctcctcccataaacaagagactcaat 252  Q
    ||||||| | ||| || ||||||  |||||||| || ||  ||||| |||||| |||| | |||||||  ||||||| |||||  ||||| |||||||||    
T  7597695 tacaaaaggattataagaaattagcttcaacaagctctccaagaacaaaacctgatttattctctttttccaatctcttcccaagaacaaaagactcaat 7597596  T
Q  253 gatt 256  Q
    ||||    
T  7597595 gatt 7597592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 106 - 262
Target Start/End: Original strand, 11712040 - 11712197
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaac-aaacc 204  Q
    ||||||| |||||| |||| ||||||||||||||| |||||||||||||| |||| | || ||| ||||||  |||||||| || |||  |||| |||||    
T  11712040 agagattgatctcttcaatccactatcaatgagttatttacaaagagatataaaagggtttcaagaaattagcttcaacaagctctcaaggaacaaaacc 11712139  T
Q  205 taatttctactcttttctcaatctcctcccataaacaagagactcaatgatttcactc 262  Q
    |||||| || | ||||||||||||| ||| |  ||||| |||||||||||||||||||    
T  11712140 taatttatattattttctcaatctcttccaaagaacaaaagactcaatgatttcactc 11712197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 275
Target Start/End: Original strand, 3231859 - 3232005
Alignment:
Q  130 atcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cctaatttctactcttttctcaatct 228  Q
    |||||| |||||||||||||||||||||||||| ||| || ||||||  |||||||| ||  |  |||||||| ||||||||||||  ||||||||||||    
T  3231859 atcaataagttctttacaaagagatacaaaatggttaaaaaaaattagcttcaacaagctcacgaagaacaaagcctaatttctacatttttctcaatct 3231958  T
Q  229 cctcccataaacaagagactcaatgatttcactcgcccaatgtgttt 275  Q
    | ||| |  ||||||||||||||||| ||||| | ||||| ||||||    
T  3231959 cttcctaagaacaagagactcaatgaattcacccacccaaggtgttt 3232005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 40328908 - 40328800
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatg-tttacaataaattattttcaacaaactatcatagaacaaacc 204  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||  |||||| |||||| ||| ||||| ||  || ||||||||||    
T  40328908 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaatgagttacaagaaattagtttaaacaagctcacaaagaacaaacc 40328810  T
Q  205 taatttctac 214  Q
    ||||||||||    
T  40328809 taatttctac 40328800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 268
Target Start/End: Original strand, 29796304 - 29796524
Alignment:
Q  50 aacaacacatcaaaaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttcttt-acaa 148  Q
    ||||||||| ||||||| |||||  ||||| |||||| |||||  |||  ||||  ||||||| ||||||||||| || ||| |||||||| ||| ||||    
T  29796304 aacaacacaccaaaaatgtttaccaagttcggtccaacaatgacctacattgggggagagattgatctctccaatccattataaatgagtttttttacaa 29796403  T
Q  149 agagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaaccta-atttctactcttttctcaatctcctcccataaacaagagac 247  Q
    | || |||||||   |||||| |||| |  ||||||||  | ||  |||||||||||  ||||||||||||||| ||||||| || ||  ||||||||||    
T  29796404 ataggtacaaaaatgttacaagaaatcagcttcaacaagttctccaagaacaaaccttgatttctactcttttcccaatctcttctcaagaacaagagac 29796503  T
Q  248 tcaatgatttcactcgcccaa 268  Q
    ||||||| |||||||||||||    
T  29796504 tcaatgaattcactcgcccaa 29796524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 8965731 - 8965900
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cc 204  Q
    |||||||||||||||| || |||||||||||||||| ||||||||||||| |||| | ||| || ||||||  |||||||||||   | |||||||| ||    
T  8965731 agagatttatctctccgatgcactatcaatgagttc-ttacaaagagatataaaagggttataagaaattaacttcaacaaactcataaagaacaaaccc 8965829  T
Q  205 taatttctactcttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||||  ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  8965830 taatttctacctttttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 8965900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 30143468 - 30143361
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  30143468 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccct 30143370  T
Q  206 aatttctac 214  Q
    |||||||||    
T  30143369 aatttctac 30143361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 40221873 - 40221766
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| ||||||||| |||||||| |||||||||||||||  | |||||| |||||| ||||||||| ||  || ||||||| |||    
T  40221873 agagattgatctctccaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaaagaacaaccct 40221775  T
Q  206 aatttctac 214  Q
    |||||||||    
T  40221774 aatttctac 40221766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 275
Target Start/End: Complemental strand, 4731778 - 4731617
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 213  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || ||| ||| |||||||||||    
T  4731778 atctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattaggttcaacaagctcacaaagagcaaccctaatttcta 4731680  T
Q  214 ctc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    | | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  4731679 cccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 4731617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 18141948 - 18141780
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| ||||||||| |||||| |||||||| ||||||||  | |||||| ||||||  |||||||| ||  || ||||| |||||    
T  18141948 agagattgatctctccaatccactatcaaagagttc-ttacaaagtgatacaaatgggttacaagaaattagcttcaacaagctcacaaagaac-aacct 18141851  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||||||||| ||||||    
T  18141850 aatttctacccattttcacaatct-caccaatgaacaagacactcaatgattttcactcgcccaaggtgttt 18141780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 27811406 - 27811237
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| |||||| |||| ||||||||||| |||||| |||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  27811406 agagattgatctcttcaatccactatcaatgggttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccct 27811308  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  27811307 aatttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 27811237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 257
Target Start/End: Original strand, 34254371 - 34254520
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||| ||||| |||||||||||||||||| | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  34254371 agagattgatctctccaatccactatcaataagttc-ttacaaagagatacaaaagggttacaagaaattaactttgacaagttcacaaagaacaaccct 34254469  T
Q  206 aatttctactcttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    ||||||||| |||||| |||||| | || || ||||||| ||||||||||||    
T  34254470 aatttctacccttttcccaatct-caccaatgaacaagacactcaatgattt 34254520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 43036551 - 43036382
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||| ||| |||||||||||||||| |||||||||||||||||    |||||| |||||| |||||||||  |  || ||||||| |||    
T  43036551 agagattgatctctcaaatccactatcaatgagttc-ttacaaagagatacaaatgaattacaagaaattagtttcaacaagttcacaaagaacaaccct 43036453  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  43036452 aatttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 43036382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 95 - 268
Target Start/End: Original strand, 19491728 - 19491900
Alignment:
Q  95 tactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcat 194  Q
    |||||||||  ||| ||| ||||||  ||| ||||||||| |||||||| |||||||||||||||  | |||||| |||||| ||||||||| ||  ||     
T  19491728 tactatgggggagatattgatctctttaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaa 19491826  T
Q  195 agaacaaacctaatttctactc-ttttctcaatctcctcccataaacaagagactcaatgatttcactcgcccaa 268  Q
    |||||||||||||||||||| | ||||| |||||| | || || ||||||| |||||||  |||||||| |||||    
T  19491827 agaacaaacctaatttctacccattttcccaatct-caccaatgaacaagacactcaatattttcactcacccaa 19491900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 106 - 257
Target Start/End: Complemental strand, 42498322 - 42498171
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||| |||||||| | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  42498322 agagattgatctctccaatccactatcaatgagttc-ttacaaagaaatacaaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccct 42498224  T
Q  206 aatttctac--tcttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    |||||||||  | ||||| |||||| | || || ||||||| ||||||||||||    
T  42498223 aatttctacctttttttcccaatct-caccaatgaacaagacactcaatgattt 42498171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 126 - 249
Target Start/End: Complemental strand, 10240263 - 10240139
Alignment:
Q  126 cactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cctaatttctactcttt-tctc 223  Q
    ||||||||||||||||||||||||||||| ||| ||| |||||| ||||||  |||||||| ||  || |||||||| || |||||||| ||||| || |    
T  10240263 cactatcaatgagttctttacaaagagatccaacatggttacaagaaattagattcaacaagctcacaaagaacaaacccaaatttcta-tctttgtccc 10240165  T
Q  224 aatctcctcccataaacaagagactc 249  Q
    ||||||||||||  ||||||||||||    
T  10240164 aatctcctcccaagaacaagagactc 10240139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 124 - 268
Target Start/End: Complemental strand, 41267080 - 41266935
Alignment:
Q  124 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cctaatttctactcttttct 222  Q
    |||||||||||  ||||||||| ||||| ||||||||   |||||| |||||| | |||||||  | ||  |||||||| ||||||||||||  ||||||    
T  41267080 ttcactatcaagaagttctttagaaagaaatacaaaagagttacaagaaattagtctcaacaagttctctaagaacaaaacctaatttctaccattttct 41266981  T
Q  223 caatctcctcccataaacaagagactcaatgatttcactcgcccaa 268  Q
    ||| ||| ||| |  ||||||||||||||||||||||||| |||||    
T  41266980 caaactcttcctaagaacaagagactcaatgatttcactcacccaa 41266935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 229
Target Start/End: Original strand, 1292503 - 1292626
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    |||||||||| |||| ||| |||||||||||||||| |||||||||||||||||    |||||| ||||||  |||||||| ||  || ||||||||| |    
T  1292503 agagatttatttctcaaatccactatcaatgagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaactt 1292601  T
Q  206 aatttctactc-ttttctcaatctc 229  Q
    ||||||||| | |||||||||||||    
T  1292602 aatttctacccattttctcaatctc 1292626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 257
Target Start/End: Original strand, 3303710 - 3303860
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| |||||| |||| |||||||||||||||| |||||||||||||||||    |||||| ||||||  || ||||| ||  || ||||||||| |    
T  3303710 agagattgatctcttcaatccactatcaatgagttc-ttacaaagagatacaaatgagttacaagaaattaggttaaacaagctcacaaagaacaaactt 3303808  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    ||||||||| | ||||| |||||| | || |||||||||| ||||||||||||    
T  3303809 aatttctacccattttcccaatct-caccaataaacaagatactcaatgattt 3303860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 229
Target Start/End: Complemental strand, 18655528 - 18655405
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||| ||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| | |    
T  18655528 agagattgatctctctaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaacctt 18655430  T
Q  206 aatttctactc-ttttctcaatctc 229  Q
    ||||||||| | |||||||||||||    
T  18655429 aatttctacccattttctcaatctc 18655405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 257
Target Start/End: Complemental strand, 33352278 - 33352128
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  33352278 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattaggttcaacaagttcacaaagaacaaccct 33352180  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    ||||| ||| | ||||| |||||| | || || ||||||| ||||||||||||    
T  33352179 aatttttacccattttcccaatct-caccaatgaacaagacactcaatgattt 33352128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 42435031 - 42435138
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| || |||||||| |||||||||||||||||| |||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  42435031 agagattgatttctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccct 42435129  T
Q  206 aatttctac 214  Q
    |||||||||    
T  42435130 aatttctac 42435138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 107 - 214
Target Start/End: Complemental strand, 4283651 - 4283545
Alignment:
Q  107 gagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaaccta 206  Q
    |||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || | ||||| ||||    
T  4283651 gagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaaaaacaacccta 4283553  T
Q  207 atttctac 214  Q
    ||||||||    
T  4283552 atttctac 4283545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 15212914 - 15212745
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| || ||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  15212914 agagattgatctctccaatccattatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccct 15212816  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | ||||| |||||| | || || ||||||| | ||||||| |||||||| ||||| ||||||    
T  15212815 aatttctacccattttcccaatct-caccaatgaacaagacattcaatgattttcactcacccaaggtgttt 15212745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 257
Target Start/End: Original strand, 34256547 - 34256696
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  34256547 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagggttacaagaaattaactttgacaagttcacaaagaacaaccct 34256645  T
Q  206 aatttctactcttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    |||||||||  ||||  |||||| | || || ||||||| ||||||||||||    
T  34256646 aatttctaccatttttccaatct-caccaatgaacaagacactcaatgattt 34256696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 220
Target Start/End: Original strand, 12702674 - 12702787
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| || ||||||||||||| ||||||||||| |||||| | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  12702674 agagattgatctctccaatccaatatcaatgagttc-ttacaaagagacacaaaagggttacaagaaattagcttcaacaagttcacaaagaacaaccct 12702772  T
Q  206 aatttctactctttt 220  Q
    ||||||||| |||||    
T  12702773 aatttctaccctttt 12702787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 127 - 262
Target Start/End: Complemental strand, 40585822 - 40585686
Alignment:
Q  127 actatcaatgagttcttt-acaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttct-actcttttctca 224  Q
    |||||||||||||||||| ||||| |||||||||| | |||||| |||||  ||||||||| ||  || |||| ||| || | |||| |||| ||| |||    
T  40585822 actatcaatgagttcttttacaaaaagatacaaaaggcttacaaaaaattcgtttcaacaagctcaca-agaataaaacttaattcttactcatttttca 40585724  T
Q  225 atctcctcccataaacaagagactcaatgatttcactc 262  Q
    || || || |||||||||||||||||||||||||||||    
T  40585723 atttcttctcataaacaagagactcaatgatttcactc 40585686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 213
Target Start/End: Complemental strand, 1822421 - 1822313
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacc- 204  Q
    ||||||| |||||||||||||||||| | |||||| |||||||| ||||| |||| | |||||| ||||||  |||||||| ||  || ||||||||||     
T  1822421 agagattgatctctccaattcactattagtgagttatttacaaatagatataaaagggttacaagaaattagcttcaacaagctcacaaagaacaaacca 1822322  T
Q  205 taatttcta 213  Q
    |||||||||    
T  1822321 taatttcta 1822313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 213
Target Start/End: Complemental strand, 1856866 - 1856758
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacc- 204  Q
    ||||||| |||||||||||||||||| | |||||| |||||||| ||||| |||| | |||||| ||||||  |||||||| ||  || ||||||||||     
T  1856866 agagattgatctctccaattcactattagtgagttatttacaaatagatataaaagggttacaagaaattagcttcaacaagctcacaaagaacaaacca 1856767  T
Q  205 taatttcta 213  Q
    |||||||||    
T  1856766 taatttcta 1856758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 257
Target Start/End: Complemental strand, 40321208 - 40321058
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| ||||||||| ||||| ||||||||||||||| ||  | |||||| ||||||  |||||||| ||  ||  |||||| |||    
T  40321208 agagattgatctctccaatccactatcaaagagtt-tttacaaagagatactaatgggttacaagaaattaacttcaacaagctcacaatgaacaaccct 40321110  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||||||    
T  40321109 aatttctacccattttcccaatct-cacctatgaacaagacactcaatgattt 40321058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 5689399 - 5689330
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||    
T  5689399 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaatta 5689330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 257
Target Start/End: Original strand, 7444930 - 7445008
Alignment:
Q  179 ttcaacaaactatcatagaacaaacctaatttctactcttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    |||||||| ||||  ||||||||| |||||||||||   |||||||||||| |||||| |||||||||||||| |||||    
T  7444930 ttcaacaagctatattagaacaaatctaatttctaccaatttctcaatctcttcccatgaacaagagactcaaagattt 7445008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 257
Target Start/End: Complemental strand, 30291735 - 30291584
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaac-aaacc 204  Q
    ||||||| ||||||||||| ||||||||| || ||| |||||||| ||||||||    |||||| ||||||  |||||||| ||  || ||||| |||||    
T  30291735 agagattgatctctccaatccactatcaaagaattc-ttacaaagtgatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaacc 30291637  T
Q  205 taatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    |||||||||| | |||||||||||| | || || ||||||| ||||||||||||    
T  30291636 taatttctacccattttctcaatct-caccaatgaacaagacactcaatgattt 30291584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 1345411 - 1345518
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| | |||| |||| ||||||||||||||||||| |||||||||||| |  | |||||| ||||||  ||||| |||||  || ||||||| |||    
T  1345411 agagattgaactcttcaatccactatcaatgagttcttt-caaagagatacatatgggttacaagaaattagcttcaataaactcacaaagaacaaccct 1345509  T
Q  206 aatttctac 214  Q
    |||||||||    
T  1345510 aatttctac 1345518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 229
Target Start/End: Original strand, 41366654 - 41366777
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||| ||||||||| |||||||| ||||||||  | ||| || ||||||  || ||||| ||  || ||||||||| |    
T  41366654 agagattgatctctccaatccactataaatgagttc-ttacaaagggatacaaataggttaaaagaaattagcttaaacaagcttacaaagaacaaacat 41366752  T
Q  206 aatttctactc-ttttctcaatctc 229  Q
    ||||||||| | |||||||||||||    
T  41366753 aatttctacccattttctcaatctc 41366777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 44353921 - 44353752
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgt-ttacaataaattattttcaacaaactatcatagaacaaacc 204  Q
    ||||||| |||| | |||| |||||||||||||||| |||||||||||||| |||||| |||||| ||||||  ||||||||  |  || ||||||| ||    
T  44353921 agagattgatcttttcaatccactatcaatgagttc-ttacaaagagatac-aaatgtgttacaagaaattagcttcaacaagttcacaaagaacaaccc 44353824  T
Q  205 taatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    |||||||||| | ||||| |||||| | |  || ||||||| ||||||||| ||| |||| ||||||||||||    
T  44353823 taatttctacccattttcccaatct-cacaaatgaacaagatactcaatgatttttactcacccaatgtgttt 44353752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 1746259 - 1746327
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    ||||||| | ||||||||| ||||||||||||||||||  ||||||||||||||| | |||||| ||||||    
T  1746259 agagattgaactctccaatccactatcaatgagttctt--caaagagatacaaaagggttacaagaaatta 1746327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 17982781 - 17982712
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    ||||||| | ||||||||| |||||||||||||||| || ||||||||||||||| | |||||| ||||||    
T  17982781 agagattgaactctccaatccactatcaatgagttc-ttccaaagagatacaaaagggttacaagaaatta 17982712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 44303983 - 44303914
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    ||||||| | ||||||||| |||||||||||||||| ||| |||||||||||||| | |||||| ||||||    
T  44303983 agagattgaactctccaatccactatcaatgagttc-ttaaaaagagatacaaaaggattacaagaaatta 44303914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 11384102 - 11384006
Alignment:
Q  117 tctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctac 214  Q
    |||||||| || |||||||| |||||| |||||||||||||||    |||||| ||||||  |||||||||||  || ||||||| ||||||||||||    
T  11384102 tctccaatccagtatcaatgggttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaaactcacaaagaacaaccctaatttctac 11384006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 4162624 - 4162518
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| || |||||||| | |||||||||||||||| |||||||||||||||    |||||| ||||||  ||||||||  | ||| |||||||||||    
T  4162624 agagattgatatctccaatcc-ctatcaatgagttctt-acaaagagatacaaatgagttacaagaaattagcttcaacaagttctcaaagaacaaacct 4162527  T
Q  206 aatttctac 214  Q
    || ||||||    
T  4162526 aacttctac 4162518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 116 - 176
Target Start/End: Complemental strand, 9765863 - 9765804
Alignment:
Q  116 ctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    ||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||    
T  9765863 ctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaatta 9765804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 214
Target Start/End: Complemental strand, 30909487 - 30909389
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 213  Q
    ||||||||||||||||||||| ||| || |||||||||||||||||  | |||||| |||||| ||| ||||| || ||  |||  ||||||||||||||    
T  30909487 atctctccaattcactatcaacgag-tcattacaaagagatacaaagag-ttacaagaaattagtttaaacaagctctccaagagtaaacctaatttcta 30909390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 262
Target Start/End: Original strand, 33655361 - 33655499
Alignment:
Q  124 ttcactatcaatgagttctttacaaagagatacaaaat-gtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactct-tttc 221  Q
    |||||||| ||||| |||||| |||||||||| ||||  |||||| | |||| |  ||||||||||| ||  |||||||| |||||||||| ||| ||||    
T  33655361 ttcactattaatgaattcttttcaaagagataaaaaaaagtttacgagaaatcagcttcaacaaactctctaagaacaaatctaatttcta-tctatttc 33655459  T
Q  222 tcaatctcctcccataaacaagagactcaatgatttcactc 262  Q
    | ||| | || |||| ||||||| |||||||||||||||||    
T  33655460 ttaatat-cttccatgaacaagacactcaatgatttcactc 33655499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 105 - 160
Target Start/End: Complemental strand, 8153887 - 8153833
Alignment:
Q  105 aagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 160  Q
    |||||||| |||||||||||  ||||||||||||||| ||||||||| ||||||||    
T  8153887 aagagattgatctctccaatcaactatcaatgagttc-ttacaaagatatacaaaa 8153833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 141
Target Start/End: Complemental strand, 10015208 - 10015173
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttc 141  Q
    ||||||||||||||||||| ||||||||||||||||    
T  10015208 agagatttatctctccaatccactatcaatgagttc 10015173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 213
Target Start/End: Original strand, 10930239 - 10930345
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| ||||||||||| |||| ||||||||||||| |||  | |||||| ||||||  |||||| | ||  || ||| ||| |||    
T  10930239 agagattgatctctccaatccactatcaatgtgttc-ttacaaagagatataaatgggttacaagaaattagcttcaacgagctcacaaagagcaaccct 10930337  T
Q  206 aatttcta 213  Q
    ||||||||    
T  10930338 aatttcta 10930345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 19945399 - 19945469
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa-tgtttacaataaatta 176  Q
    ||||||| | ||||||||| |||||||||||||||| || ||||||||||||||| || |||||| ||||||    
T  19945399 agagattgaactctccaatccactatcaatgagttc-ttccaaagagatacaaaagtggttacaagaaatta 19945469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 160
Target Start/End: Original strand, 3073913 - 3073966
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 160  Q
    ||||||| ||||||||||  || ||||||||||||| ||||||||||||||||||    
T  3073913 agagattgatctctccaagccattatcaatgagttc-ttacaaagagatacaaaa 3073966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 108 - 158
Target Start/End: Complemental strand, 10929914 - 10929865
Alignment:
Q  108 agatttatctctccaattcactatcaatgagttctttacaaagagatacaa 158  Q
    |||||| |||||||||| |||||||||||||||| |||||||||| |||||    
T  10929914 agatttctctctccaatccactatcaatgagttc-ttacaaagagttacaa 10929865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 186
Target Start/End: Complemental strand, 11137146 - 11137074
Alignment:
Q  117 tctccaattcactatcaatgag---ttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 186  Q
    ||||||||||||||||||||||   || ||||||||||||||||||| | ||| || ||||||  ||||||||    
T  11137146 tctccaattcactatcaatgagtttttttttacaaagagatacaaaacggttataagaaattagcttcaacaa 11137074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 31218385 - 31218316
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    ||||||| | ||||| ||| |||||||||||||||| || ||||||||||||||| | |||||| ||||||    
T  31218385 agagattgaactctctaatccactatcaatgagttc-ttccaaagagatacaaaagggttacaagaaatta 31218316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 143
Target Start/End: Original strand, 4743254 - 4743291
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctt 143  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  4743254 agagattgatctctccaatccactatcaatgagttctt 4743291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 6599100 - 6598993
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||| ||| |||||||||||||||| |||||||   |||||||  | |||||| ||||||  || ||||| ||  || ||||||||| |    
T  6599100 agagattgatctctctaatccactatcaatgagttc-ttacaaaagtatacaaatgggttacaagaaattagcttaaacaagctcgcaaagaacaaactt 6599002  T
Q  206 aatttctac 214  Q
    |||||||||    
T  6599001 aatttctac 6598993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 6674553 - 6674446
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||| ||| |||||||||||||||| |||||||   |||||||  | |||||| ||||||  || ||||| ||  || ||||||||| |    
T  6674553 agagattgatctctctaatccactatcaatgagttc-ttacaaaagtatacaaatgggttacaagaaattagcttaaacaagctcgcaaagaacaaactt 6674455  T
Q  206 aatttctac 214  Q
    |||||||||    
T  6674454 aatttctac 6674446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 122 - 158
Target Start/End: Complemental strand, 40873765 - 40873729
Alignment:
Q  122 aattcactatcaatgagttctttacaaagagatacaa 158  Q
    ||||||||||||| ||||||||||||||||| |||||    
T  40873765 aattcactatcaaagagttctttacaaagagttacaa 40873729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 1e-28; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 106 - 257
Target Start/End: Complemental strand, 40735511 - 40735361
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||||| ||||||||||||||| || |||||||||||||  |||||||| ||  || ||||||| |||    
T  40735511 agagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaactggttacaataaattagcttcaacaagctcacaaagaacaaccct 40735413  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    ||||||||| | |||||||||||| | || || ||||||| ||||||||||||    
T  40735412 aatttctacccattttctcaatct-caccaatgaacaagacactcaatgattt 40735361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 126 - 275
Target Start/End: Original strand, 35138765 - 35138915
Alignment:
Q  126 cactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctcaa 225  Q
    |||||||||||||||||||||||||||||||||||   || ||| ||||||  |||||||||||  |  ||||||||| |||||||||| | ||||||||    
T  35138765 cactatcaatgagttctttacaaagagatacaaaagagttgcaagaaattaacttcaacaaactcaccaagaacaaacataatttctacccatttctcaa 35138864  T
Q  226 tctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    |||| | |||| ||||||| ||||||||| |||||||| ||||| ||||||    
T  35138865 tctctttccatgaacaagacactcaatgattttcactctcccaaggtgttt 35138915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 275
Target Start/End: Original strand, 26323124 - 26323283
Alignment:
Q  117 tctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactc 216  Q
    |||||| ||||||||||||||||| ||||| |||| |||||||| | |||||| ||||||  ||||||||||| |   | |||||||||||||| ||| |    
T  26323124 tctccacttcactatcaatgagttttttaccaagatatacaaaaaggttacaagaaattagcttcaacaaactcttcaaaaacaaacctaatttttaccc 26323223  T
Q  217 ttttctcaatctcctcccataaacaagagactcaatgat-ttcactcgcccaatgtgttt 275  Q
    ||||||||||||| |||||| ||||||| ||| |||||| ||||||| | ||| ||||||    
T  26323224 ttttctcaatctcatcccatgaacaagacacttaatgatgttcactcactcaaggtgttt 26323283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 44700518 - 44700687
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| ||||||||| |||||||| |||||||||||||||  | |||||| ||||||  |||||||||||  || ||||||| |||    
T  44700518 agagattgatctctccaatccactatcaaagagttctt-acaaagagatacaaataggttacaagaaattagcttcaacaaactcacaaagaacaaccct 44700616  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  44700617 aatttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 44700687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 124 - 275
Target Start/End: Original strand, 8166514 - 8166667
Alignment:
Q  124 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctc 223  Q
    |||||||||||  |||||||||||||||||||||||| | ||| || | ||||  ||||||||||| ||  |||||||||||||||||||||| ||| ||    
T  8166514 ttcactatcaacaagttctttacaaagagatacaaaaaggttataagatattaacttcaacaaactctccaagaacaaacctaatttctactcatttatc 8166613  T
Q  224 aatctcctcccataaacaag--agactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||| || |||| ||||||  | ||||||||| |||||| | ||||||||||||    
T  8166614 aatct-cttccatgaacaagacacactcaatgattttcacccacccaatgtgttt 8166667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 106 - 259
Target Start/End: Complemental strand, 33191959 - 33191807
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaac-aaacc 204  Q
    ||||||| ||||||| ||| |||||||||||||||||||||||||| ||  |||||| |||||| || |||  |||||||| || ||  ||||| ||||     
T  33191959 agagattgatctctctaatccactatcaatgagttctttacaaagacat--aaaatggttacaagaacttagcttcaacaagctctctaagaacaaaaca 33191862  T
Q  205 taatttctactcttttctcaatctcctcccataaacaagagactcaatgatttca 259  Q
    || |||||||| ||||||||||||| | |||  ||||||||||||||| ||||||    
T  33191861 tagtttctactattttctcaatctcttaccaataacaagagactcaattatttca 33191807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 108 - 275
Target Start/End: Complemental strand, 46860600 - 46860432
Alignment:
Q  108 agatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaa 207  Q
    ||||| ||||||||||| ||||||||||||||| || |||||||||||||||  | |||||| ||||||  |||||||| ||  || |||||||||||||    
T  46860600 agattgatctctccaatccactatcaatgagttatt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaacctaa 46860502  T
Q  208 tttctactc-ttttctcaatctcctcccataaacaagagactcaatga--tttcactcgcccaatgtgttt 275  Q
    ||||||| | |||||||||||| | || || ||||||| ||||| |||  |||||||| ||||| ||||||    
T  46860501 tttctacccattttctcaatct-caccaatgaacaagacactcattgaattttcactctcccaaggtgttt 46860432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 124 - 262
Target Start/End: Complemental strand, 2020250 - 2020121
Alignment:
Q  124 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctc 223  Q
    |||| ||||||||||||||||||||||| |||||||| | ||| || ||||||  ||||||||         ||||||| |||| |||||| | ||||||    
T  2020250 ttcaatatcaatgagttctttacaaagaaatacaaaacggttataagaaattagcttcaacaa---------gaacaaatctaacttctacccatttctc 2020160  T
Q  224 aatctcctcccataaacaagagactcaatgatttcactc 262  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  2020159 aatctcttcccataaacaagagactcaatgaattcactc 2020121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 54593832 - 54593727
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||||| |||||||||||||||  | |||||||||||||  |||||||| ||  || ||||||| |||    
T  54593832 agagattgatctctccaatccactatcaatgagttctt-acaaagagatacaaatgggttacaataaattagcttcaacaagctcacaaagaacaaccct 54593734  T
Q  206 aatttct 212  Q
    |||||||    
T  54593733 aatttct 54593727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 22 - 262
Target Start/End: Complemental strand, 20937868 - 20937629
Alignment:
Q  22 aacaagataaagagggtggagaaaagagaacaacacatcaaaaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctcc 121  Q
    |||||||||||||| || ||||||||||||| |||||  | || | |||||  ||||| ||||||  ||||  |||| ||||  |  |||| ||||||||    
T  20937868 aacaagataaagagagtagagaaaagagaaccacacaaaataattgtttacctagttctgtccaactatgacatactttgggggaacgattgatctctcc 20937769  T
Q  122 aattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctac-tctttt 220  Q
    |||  | |||||||||||||||| ||||||||||||||| | |||||| ||||||  |||||||| || ||  | ||||||| |||||||||| | ||||    
T  20937768 aatcta-tatcaatgagttcttttcaaagagatacaaaagggttacaagaaattaacttcaacaagctctccaaaaacaaacataatttctacctatttt 20937670  T
Q  221 ctcaatctcctcccataaacaagagactcaatgatttcactc 262  Q
    | | ||||| | | || ||||||||||||||||||| |||||    
T  20937669 c-cgatctctttctatgaacaagagactcaatgattgcactc 20937629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 106 - 229
Target Start/End: Complemental strand, 7762393 - 7762270
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||   |||||| ||||||  ||||||||  |  || ||||||| |||    
T  7762393 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagagttacaagaaattagcttcaacaagttcacaaagaacaaccct 7762295  T
Q  206 aatttctactc-ttttctcaatctc 229  Q
    ||||||||| | |||||||||||||    
T  7762294 aatttctaccctttttctcaatctc 7762270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 30236253 - 30236146
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  30236253 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaataggttacaagaaattagcttcaacaagctcacaaagaacaaccct 30236155  T
Q  206 aatttctac 214  Q
    |||||||||    
T  30236154 aatttctac 30236146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 40734626 - 40734457
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgt-ttacaataaattattttcaacaaactatcatagaacaaacc 204  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||| ||||| |||||| |||||| ||||||  |||||||| ||  || ||||||| ||    
T  40734626 agagattgatctctccaatccactatcaatgagttc-ttacaaagggatac-aaatgtgttacaagaaattaggttcaacaagctcacaaagaacaaccc 40734529  T
Q  205 taatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    |||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  40734528 taatttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 40734457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 213
Target Start/End: Original strand, 25491015 - 25491114
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 213  Q
    ||||||||| |||||||||||||| |||||||||||||||||||||| |  || || |||| |  |||||||| || ||| |||||||||||||||||||    
T  25491015 atctctccacttcactatcaatgatttctttacaaagagatacaaaaggagtataagaaatcagcttcaacaagctctcaaagaacaaacctaatttcta 25491114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 257
Target Start/End: Complemental strand, 45095291 - 45095142
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  45095291 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccct 45095193  T
Q  206 aatttctactcttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    |||||||||  ||||| |||||| | || || ||||||| ||||||||||||    
T  45095192 aatttctaccattttcccaatct-caccaatgaacaagacactcaatgattt 45095142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 114 - 275
Target Start/End: Original strand, 1313852 - 1314014
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacc-taatttct 212  Q
    ||||||| ||| || |||||||||||||||| |||||| |||||||| | || ||| ||||||  || ||||| || ||  |||||||| | |||||| |    
T  1313852 atctctctaatccaatatcaatgagttcttttcaaagatatacaaaaggcttgcaagaaattagctttaacaagctctccaagaacaaaacataattttt 1313951  T
Q  213 actcttttctcaatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttt 275  Q
    || |||||||||||||| || ||  || |||||||||||| ||||||||| ||||| ||||||    
T  1313952 acccttttctcaatctcttctcaagaataagagactcaataatttcactcacccaaggtgttt 1314014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 49199509 - 49199617
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaat-gtttacaataaattattttcaacaaactatcatagaacaaacc 204  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||| | |||||| ||||||  |||||||| ||  || ||||||| |     
T  49199509 agagattaatctctccaatccactatcaatgagttc-ttacaaagagatacaaaatgggttacaagaaattagcttcaacaagctcacaaagaacaacct 49199607  T
Q  205 taatttctac 214  Q
    ||||||||||    
T  49199608 taatttctac 49199617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 229
Target Start/End: Original strand, 6095639 - 6095762
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||| ||  |  || ||||||| |||    
T  6095639 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattaacttcaagaagtttacaaagaacaaccct 6095737  T
Q  206 aatttctactc-ttttctcaatctc 229  Q
    ||||||||||| ||||| |||||||    
T  6095738 aatttctactcattttcccaatctc 6095762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 22835042 - 22835149
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||| ||||||||  | |||||| ||||||  || ||||| ||  || |||||||||||    
T  22835042 agagattgatctctccaatccactatcaatgagttc-ttacaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaacct 22835140  T
Q  206 aatttctac 214  Q
    |||||||||    
T  22835141 aatttctac 22835149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 34491340 - 34491233
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||    |||||| ||||||  |||||||| ||  || ||||||| |||    
T  34491340 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaccct 34491242  T
Q  206 aatttctac 214  Q
    |||||||||    
T  34491241 aatttctac 34491233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 46173485 - 46173378
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||| ||||| |||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  46173485 agagattgatctctccaatccactatcaatgaattctt-acaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccct 46173387  T
Q  206 aatttctac 214  Q
    |||||||||    
T  46173386 aatttctac 46173378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 221
Target Start/End: Complemental strand, 7764592 - 7764478
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||   |||||| ||||||  || |||||  |  || ||||||| |||    
T  7764592 agagattcatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagagttacaagaaattagctttaacaagttcacaaagaacaaccct 7764494  T
Q  206 aatttctactcttttc 221  Q
    ||||||||| ||||||    
T  7764493 aatttctacccttttc 7764478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 29682487 - 29682318
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||| ||||||||  | | |||| ||||||  || ||||| ||  || ||||||||| |    
T  29682487 agagattgatctctccaatccactatcaatgagttc-ttacaaagggatacaaatgggtgacaagaaattagcttaaacaagctcacaaagaacaaacat 29682389  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | ||||| |||||| | |  |||||||||| ||||||||| |||||||| ||||| ||||||    
T  29682388 aatttctacccattttcccaatct-cacaaataaacaagacactcaatgattttcactcacccaaggtgttt 29682318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 44331673 - 44331504
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||| ||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  ||  |||||| |||    
T  44331673 agagattgatctctccaatccactatcaataagttc-ttacaaagagatacaaatggcttacaagaaattagcttcaacaagctcacaatgaacaaccct 44331575  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | |||||  ||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  44331574 aatttctacccattttcctaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 44331504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 261
Target Start/End: Complemental strand, 1683620 - 1683450
Alignment:
Q  88 aatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaa 187  Q
    |||||| ||||||||| ||||||   ||||||||| |||||||| ||||||||||||||||||||||  |||| |  ||||| ||||||   |||| ||     
T  1683620 aatgatctactatggggaagagag--atctctccacttcactataaatgagttctttacaaagagattaaaaacg-atacaagaaattagcatcaataag 1683524  T
Q  188 ctatcatagaacaaacctaatttctactcttttctcaatctcctcccataaacaagagactcaatgatttcact 261  Q
    || ||  ||||| ||| ||||||||||  ||||||||||||  | |||| |||||||||||| |||| ||||||    
T  1683523 ctctcgaagaacgaacttaatttctaccattttctcaatctatttccatgaacaagagactcgatgacttcact 1683450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 9581410 - 9581242
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||| ||||||||  | ||| || ||||||  || ||||| ||  || |||||||||||    
T  9581410 agagattgatctctccaatccactatcaatgagttc-ttacaaagggatacaaatgggttaaaagaaattagcttaaacaagctcacaaagaacaaacct 9581312  T
Q  206 aatttctactcttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | ||||  |||| || |  || ||||||| ||||||||| |||||||| ||||| ||||||    
T  9581311 aatttctacccatttccgaatc-ccacaaatgaacaagacactcaatgattttcactcacccaaggtgttt 9581242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 19683929 - 19683998
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||| | |||||| ||||||    
T  19683929 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaagggttacaagaaatta 19683998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 108 - 275
Target Start/End: Original strand, 5236498 - 5236665
Alignment:
Q  108 agatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaa 207  Q
    ||||| ||||||| ||| || ||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||||    
T  5236498 agattgatctctcgaatccattatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccctaa 5236596  T
Q  208 tttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  5236597 tttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 5236665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 9636166 - 9636282
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| | ||||||||| |||||||||||||||| ||||||| |||||||||| | |||||| |||||| |||  ||||  |  || ||||||| |||    
T  9636166 agagattgaactctccaatccactatcaatgagttc-ttacaaaaagatacaaaagggttacaagaaattagttttgacaagttcacaaagaacaaccct 9636264  T
Q  206 aatttctactcttttctc 223  Q
    ||||||||| ||||||||    
T  9636265 aatttctacccttttctc 9636282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 106 - 229
Target Start/End: Complemental strand, 32891232 - 32891108
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaac-aaacc 204  Q
    ||||||||||||||||||| ||||||||| |||||| |||||||||||||||||    |||||| ||||||  |||||||| ||  || ||||| ||||     
T  32891232 agagatttatctctccaatccactatcaacgagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaaaact 32891134  T
Q  205 taatttctactc-ttttctcaatctc 229  Q
    |||||||||| | |||||||||||||    
T  32891133 taatttctacccattttctcaatctc 32891108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 43401841 - 43401949
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatg-tttacaataaattattttcaacaaactatcatagaacaaacc 204  Q
    ||||||| || |||||||| |||||||||||||||| ||||||||||||| ||||||  |||||| ||||||  |||||||| ||  || ||||||| ||    
T  43401841 agagattaatttctccaatccactatcaatgagttc-ttacaaagagataaaaaatgcgttacaagaaattagcttcaacaagctcacaaagaacaaccc 43401939  T
Q  205 taatttctac 214  Q
    ||||||||||    
T  43401940 taatttctac 43401949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 117 - 229
Target Start/End: Original strand, 54739004 - 54739116
Alignment:
Q  117 tctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaac-ctaatttctact 215  Q
    |||||||| |||||||||||||||||||||| ||||||| ||||   |||| |||||||| ||||||||| ||  || ||||||||| |||||||||||     
T  54739004 tctccaatccactatcaatgagttctttacagagagatataaaagagttac-ataaattagtttcaacaagctcacaaagaacaaacactaatttctacc 54739102  T
Q  216 cttttctcaatctc 229  Q
     |||| ||||||||    
T  54739103 attttttcaatctc 54739116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 22 - 159
Target Start/End: Original strand, 55301929 - 55302064
Alignment:
Q  22 aacaagataaagagggtggagaaaagagaacaacacatcaaaaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctcc 121  Q
    |||||||||||||| ||  |||||||| |||||||| | | |||| || ||  ||||| |||||| |||||  ||||||||   ||||||| ||||||||    
T  55301929 aacaagataaagagagtaaagaaaagataacaacac-taagaaatgttcaccaagttcggtccaacaatgacctactatggaggagagattgatctctcc 55302027  T
Q  122 aattcactatcaatgagttctttacaaagagatacaaa 159  Q
    ||| |||||||||||| ||| |||||||||||||||||    
T  55302028 aatccactatcaatgaattc-ttacaaagagatacaaa 55302064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 760975 - 760868
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||| ||||||||  | |||||| ||||||  || ||||| ||  || |||||| ||||    
T  760975 agagattgatctctccaatccactatcaatgagttc-ttacaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacagacct 760877  T
Q  206 aatttctac 214  Q
    |||||||||    
T  760876 aatttctac 760868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 29196426 - 29196596
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cc 204  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | || ||| ||||||  ||  |||| ||  || |||||||| ||    
T  29196426 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttccaagaaattagctttgacaagctcacaaagaacaaaccc 29196524  T
Q  205 taatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    |||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  29196525 taatttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 29196596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 186
Target Start/End: Complemental strand, 29810996 - 29810917
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 186  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||    
T  29810996 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaa 29810917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 114 - 275
Target Start/End: Complemental strand, 31314565 - 31314404
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 213  Q
    ||||||||||| ||||||||| |||||| ||||||| |||||||||  | |||||| ||||||  ||||||||  |  ||  |||||| |||||||||||    
T  31314565 atctctccaatccactatcaaagagttc-ttacaaaaagatacaaatgggttacaagaaattagcttcaacaagatcacaatgaacaaccctaatttcta 31314467  T
Q  214 ctc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    | | |||||||||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  31314466 cccattttctcaatct-cacctatgaacaagacactcaatgattttcactcacccaaagtgttt 31314404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 23197979 - 23198048
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    ||||||| | |||||||||||||||||||||||||| ||||||| |||||||||| | |||||| ||||||    
T  23197979 agagattgaactctccaattcactatcaatgagttc-ttacaaaaagatacaaaagggttacaagaaatta 23198048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 23200178 - 23200247
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    ||||||| | |||||||||||||||||||||||||| ||||||| |||||||||| | |||||| ||||||    
T  23200178 agagattgaactctccaattcactatcaatgagttc-ttacaaaaagatacaaaagggttacaagaaatta 23200247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 216
Target Start/End: Original strand, 23391949 - 23392058
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    |||||||||||||| |||| ||||||||| |||||| || ||||| ||||||||  | |||||| ||||||| || ||||| ||  || ||||||||| |    
T  23391949 agagatttatctctacaatccactatcaaagagttc-ttgcaaagtgatacaaatgggttacaagaaattatcttaaacaagctcacaaagaacaaactt 23392047  T
Q  206 aatttctactc 216  Q
    |||||||||||    
T  23392048 aatttctactc 23392058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 214
Target Start/End: Complemental strand, 24635368 - 24635278
Alignment:
Q  124 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctac 214  Q
    |||||||||||||| ||  ||| |||||||||||||||  |||||| ||||||  ||||||||||| ||  ||||||||| ||||||||||    
T  24635368 ttcactatcaatgaattgattataaagagatacaaaatagttacaaaaaattagcttcaacaaactctccaagaacaaacttaatttctac 24635278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 37408586 - 37408517
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    ||||||| |||||| |||| |||||||||||||||| |||||||||||||||||| | |||||| ||||||    
T  37408586 agagattgatctcttcaatccactatcaatgagttc-ttacaaagagatacaaaagggttacaagaaatta 37408517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 4570080 - 4570028
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 159  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||    
T  4570080 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaa 4570028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 43403784 - 43403892
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatg-tttacaataaattattttcaacaaactatcatagaacaaacc 204  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||| || |||  |||||| |||| |  |||||||| ||  || ||||||| ||    
T  43403784 agagattaatctctccaatccactatcaatgagttc-ttacaaagagataaaacatgagttacaagaaatgagcttcaacaagctcacaaagaacaagcc 43403882  T
Q  205 taatttctac 214  Q
    ||||||||||    
T  43403883 taatttctac 43403892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 29813191 - 29813084
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||| ||||||||| |||||||||||| ||||  | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  29813191 agagattgatctctccaatccactataaatgagttc-ttacaaagagatgcaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccct 29813093  T
Q  206 aatttctac 214  Q
    |||||||||    
T  29813092 aatttctac 29813084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 187
Target Start/End: Original strand, 40519258 - 40519317
Alignment:
Q  127 actatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaa 187  Q
    |||||||||||||||||||||||||||||||||||  |||||| ||||||  |||||||||    
T  40519258 actatcaatgagttctttacaaagagatacaaaat-attacaagaaattaacttcaacaaa 40519317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 229
Target Start/End: Complemental strand, 47304379 - 47304256
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||| |||||||||| |  | |||||| | ||||  |||||||| ||  || ||||||| | |    
T  47304379 agagattgatctctccaatccactatcaatgagttc-ttacgaagagatacagatgggttacaagatattaacttcaacaagctcacaaagaacaaccat 47304281  T
Q  206 aatttctactc-ttttctcaatctc 229  Q
    ||||||||| | |||||||||||||    
T  47304280 aatttctacccattttctcaatctc 47304256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 257
Target Start/End: Original strand, 3148038 - 3148181
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 213  Q
    |||||| || ||||| ||||||||| |  ||||||| | |||||| | | |||||| ||||||  |||||||| || |   |||| ||||||||||||||    
T  3148038 atctctgcacttcacaatcaatgagattcttacaaacaaatacaataaggttacaagaaattagcttcaacaagctcttcaagaagaaacctaatttcta 3148137  T
Q  214 ctcttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
      | |||||||||||| ||||| |||||| ||||||||| ||||    
T  3148138 tccatttctcaatctcttcccacaaacaaaagactcaattattt 3148181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 176
Target Start/End: Original strand, 5258183 - 5258253
Alignment:
Q  105 aagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    |||||||| | ||||||||| |||||||||||||||| || ||||||||||||||| | |||||| ||||||    
T  5258183 aagagattgaactctccaatccactatcaatgagttc-ttccaaagagatacaaaagggttacaagaaatta 5258253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 176
Target Start/End: Original strand, 5260362 - 5260432
Alignment:
Q  105 aagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    |||||||| | ||||||||| |||||||||||||||| || ||||||||||||||| | |||||| ||||||    
T  5260362 aagagattgaactctccaatccactatcaatgagttc-ttccaaagagatacaaaagggttacaagaaatta 5260432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 220
Target Start/End: Complemental strand, 5373353 - 5373247
Alignment:
Q  115 tctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cctaatttcta 213  Q
    |||||||||| || |  |||||||||| ||||||||||||| |||| | |||||||||||||  |||||||| ||   | |||||||| |||||||||||    
T  5373353 tctctccaatccattggcaatgagttccttacaaagagatataaaagggttacaataaattagcttcaacaagctcaaaaagaacaaagcctaatttcta 5373254  T
Q  214 ctctttt 220  Q
    | |||||    
T  5373253 ccctttt 5373247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 211
Target Start/End: Complemental strand, 36018980 - 36018876
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatg-tttacaataaattattttcaacaaactatcatagaacaaacc 204  Q
    ||||||| | ||||||||| |||||| ||||||||||| ||||||||||||||||||  |||||| ||||||  |||||||| ||  || ||||||| ||    
T  36018980 agagattgacctctccaatccactat-aatgagttctt-acaaagagatacaaaatgagttacaagaaattaacttcaacaagctcacaaagaacaaccc 36018883  T
Q  205 taatttc 211  Q
    |||||||    
T  36018882 taatttc 36018876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 246
Target Start/End: Original strand, 4055811 - 4055943
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaa-tgtttacaataaattattttcaacaaactatcatagaacaaacctaatttct 212  Q
    |||||| |||| |||||||||||||||  ||||||||||||||||||  | |||||| ||||||  ||  ||||  | ||  ||||| ||||||||||||    
T  4055811 atctcttcaatccactatcaatgagtttcttacaaagagatacaaaagaggttacaagaaattaacttttacaagttctccaagaac-aacctaatttct 4055909  T
Q  213 actcttttctcaatctcctcccataaacaagaga 246  Q
    || | |||| ||||||| |||||| |||||||||    
T  4055910 acccatttcccaatctcttcccatgaacaagaga 4055943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 155
Target Start/End: Complemental strand, 16499157 - 16499109
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagata 155  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||    
T  16499157 agagattgatctctccaatccactatcaatgagttc-ttacaaagagata 16499109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 40913421 - 40913369
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 159  Q
    ||||||| ||||||||||| ||||||| |||||||| |||||||||||||||||    
T  40913421 agagattgatctctccaatccactatcgatgagttc-ttacaaagagatacaaa 40913369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 159
Target Start/End: Complemental strand, 51398934 - 51398890
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaa 159  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||    
T  51398934 atctctccaatccactatcaatgagttc-ttacaaagagatacaaa 51398890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 53921543 - 53921650
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||  ||||||||    |||||| ||||||  || ||||| ||  || | |||||||||    
T  53921543 agagattgatctctccaatccactatcaatgagttc-ttacaaaatgatacaaatgagttacaagaaattagctttaacaagctcacaaacaacaaacct 53921641  T
Q  206 aatttctac 214  Q
    |||||||||    
T  53921642 aatttctac 53921650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 229
Target Start/End: Original strand, 7780044 - 7780166
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| | ||||||||| ||||||||||||||||||   |||||||||||||| | |||||| ||||||  ||  ||||  |  ||  |||||| |||    
T  7780044 agagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa-ggttacaagaaattagatttgacaagttcacaatgaacaaccct 7780142  T
Q  206 aatttctactcttttctcaatctc 229  Q
    ||||||||| |||||| |||||||    
T  7780143 aatttctacccttttcccaatctc 7780166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 160
Target Start/End: Complemental strand, 801210 - 801166
Alignment:
Q  116 ctctccaattcactatcaatgagttctttacaaagagatacaaaa 160  Q
    ||||||||| ||||||||||||||||||   ||||||||||||||    
T  801210 ctctccaatccactatcaatgagttcttacaaaagagatacaaaa 801166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 41819563 - 41819617
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatg 162  Q
    ||||||| || |||||||| |||||| ||||||||||| ||||||||||||||||||    
T  41819563 agagattgatgtctccaatccactat-aatgagttctt-acaaagagatacaaaatg 41819617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 261
Target Start/End: Original strand, 50432733 - 50432849
Alignment:
Q  146 caaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctc-aatctcctcccataaacaaga 244  Q
    |||||||||||||||  ||| ||| ||||||  |||||||  || ||  ||| || ||||||||||||| |||||| | |||||| |||  | | |||||    
T  50432733 caaagagatacaaaagatttgcaagaaattaacttcaacacgctctccaagagcagacctaatttctacccttttcccgaatctcatcctgtgaccaaga 50432832  T
Q  245 gactcaatgatttcact 261  Q
    |||||||||||||||||    
T  50432833 gactcaatgatttcact 50432849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 54744304 - 54744357
Alignment:
Q  121 caattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    |||| |||||||| | ||||||||||||||||||||||||   |||||||||||||    
T  54744304 caatccactatcagtaagttctttacaaagagatacaaaa--gttacaataaatta 54744357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 64; Significance: 5e-28; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 101 - 263
Target Start/End: Original strand, 490355 - 490520
Alignment:
Q  101 gggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaaca 200  Q
    |||| ||||| | ||||||||  |||||||||||||||| ||||||||||| ||||||||   |||||| ||||||  |||||||| || ||  ||||||    
T  490355 gggagagagaatgatctctccgcttcactatcaatgagtactttacaaagatatacaaaagagttacaagaaattagcttcaacaagctctccaagaaca 490454  T
Q  201 aacctaatttctactcttttctcaatctcctcc---cataaacaagagactcaatgatttcactcg 263  Q
    ||| ||||||||||  |||||||||||||||||   ||| ||||||||||||||||| ||||||||    
T  490455 aacttaatttctacgattttctcaatctcctcctttcatgaacaagagactcaatgagttcactcg 490520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 434661 - 434592
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    ||||||| | ||||||||| |||||||||||||||| |||||||||||||||||| | |||||| ||||||    
T  434661 agagattgaactctccaatccactatcaatgagttc-ttacaaagagatacaaaagggttacaagaaatta 434592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 198 - 263
Target Start/End: Original strand, 490584 - 490652
Alignment:
Q  198 acaaacctaatttctactcttttctcaatctcctcc---cataaacaagagactcaatgatttcactcg 263  Q
    |||||||||||||||||  ||||||||||||||| |   ||| ||||||||||||||||| ||||||||    
T  490584 acaaacctaatttctacgattttctcaatctccttctttcatgaacaagagactcaatgagttcactcg 490652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 8e-27; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 22 - 262
Target Start/End: Original strand, 12318480 - 12318718
Alignment:
Q  22 aacaagataaagagggtggagaaaagagaacaacacatcaaaaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctcc 121  Q
    |||||||||||| | ||  |||||||||||||||||   |||| | |||||  ||||| ||||||||||||  |||||||||  |||||  | ||||| |    
T  12318480 aacaagataaagggagtaaagaaaagagaacaacaccaaaaaattgtttacctagttcggtccaataatgaactactatgggggagagagatctctctgc 12318579  T
Q  122 aattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttc 221  Q
      |||| ||||||||||||||| |  |||| |||||||||| |||||| ||||||  |||||||| || ||   ||||||||||||||||||| | ||||    
T  12318580 --ttcagtatcaatgagttcttaaagaagacatacaaaatggttacaagaaattagcttcaacaagctctccatgaacaaacctaatttctacccatttc 12318677  T
Q  222 tcaatctcctcccataaacaagagactcaatgatttcactc 262  Q
      ||||||  ||||| ||||||| |||||||||||||||||    
T  12318678 caaatctctacccatgaacaagaaactcaatgatttcactc 12318718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 114 - 244
Target Start/End: Complemental strand, 22079437 - 22079307
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 213  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||| |||||| ||||||  || ||||| ||  || ||||||||| |||||||||    
T  22079437 atctctccaatccaatatcaatgagttctttacaaagagatacaaaatggttacaagaaattagctttaacaagctcacaaagaacaaacataatttcta 22079338  T
Q  214 ctcttttctcaatctcctcccataaacaaga 244  Q
    |  ||||  ||||||| |||||| |||||||    
T  22079337 ccatttttccaatctcttcccatgaacaaga 22079307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 105 - 258
Target Start/End: Original strand, 9109458 - 9109611
Alignment:
Q  105 aagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacc 204  Q
    |||||||| ||||||||||| ||||||||| | ||||||||||||||||||||||| | |||||| ||||||  ||||||||  | ||  || | ||||     
T  9109458 aagagattgatctctccaatacactatcaacgtgttctttacaaagagatacaaaagggttacaagaaattaacttcaacaagttctccaagtaaaaact 9109557  T
Q  205 taatttctactcttttctcaatctcctcccataaacaagagactcaatgatttc 258  Q
    |||||||| |  ||||||||||||||| |||| ||||||| |||||| ||||||    
T  9109558 taatttcttccattttctcaatctcctaccatgaacaagacactcaaggatttc 9109611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 49918478 - 49918309
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  49918478 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccct 49918380  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | |||||||||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  49918379 aatttctacccattttctcaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 49918309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 19 - 275
Target Start/End: Complemental strand, 41136033 - 41135780
Alignment:
Q  19 aataacaagataaagagggtggagaaaagagaacaacacatcaaaaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctc 118  Q
    ||||||||||||||||| || ||||||| |||||||||||  |||||| ||||| || || |||| || |||||  |||| || |  |||||  | ||||    
T  41136033 aataacaagataaagagagtagagaaaa-agaacaacacaaaaaaaatgtttacccaattaagtcgaacaatgacctactctgagggagagagatctctc 41135935  T
Q  119 tccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactctt 218  Q
    | |  |||| |||||| |||||||||||||| |||||||||| |||||||| ||||||  ||||| ||  | |   |||||||| ||||||||||| |||    
T  41135934 tgc--ttcagtatcaacgagttctttacaaatagatacaaaaggtttacaagaaattaacttcaaaaagttcttcaagaacaaatctaatttctaccctt 41135837  T
Q  219 ttctcaatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttt 275  Q
    ||   | ||||||| ||  ||||||||||||||||||||| ||| ||||| ||||||    
T  41135836 tttctattctcctcacaggaacaagagactcaatgatttccctcacccaaggtgttt 41135780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 106 - 257
Target Start/End: Complemental strand, 3156993 - 3156843
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  3156993 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccct 3156895  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    ||||||||| | |||||||||||| | || || ||||||| ||||||||||||    
T  3156894 aatttctacccattttctcaatct-caccaatgaacaagacactcaatgattt 3156843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 106 - 229
Target Start/End: Complemental strand, 19754623 - 19754499
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  19754623 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatcggttacaagaaattagcttcaacaagctcacaaagaacaaccct 19754525  T
Q  206 aatttctactc--ttttctcaatctc 229  Q
    ||||||||| |  |||||||||||||    
T  19754524 aatttctacccatttttctcaatctc 19754499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 114 - 275
Target Start/End: Original strand, 4535528 - 4535688
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 213  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||   |||||| |||||   ||||| || || ||  ||||||||| |||||||||    
T  4535528 atctctccacttaactatcaatgagttctttacaaagagatacaaaaatgttacaagaaattgacttcaataagctctccaagaacaaacttaatttcta 4535627  T
Q  214 ctcttttctcaatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttt 275  Q
    |   || | ||||||| | |  | |||||||| |||||||||||||||| ||||||||||||    
T  4535628 ccaattccgcaatctcttactttgaacaagag-ctcaatgatttcactcacccaatgtgttt 4535688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 7482270 - 7482378
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaat-gtttacaataaattattttcaacaaactatcatagaacaaacc 204  Q
    ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||||| ||||||  || ||||| ||  || ||||||| ||    
T  7482270 agagattgatctctccaattcactatcaatgagttc-ttacaaagagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccc 7482368  T
Q  205 taatttctac 214  Q
    ||||||||||    
T  7482369 taatttctac 7482378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 214
Target Start/End: Original strand, 37033080 - 37033220
Alignment:
Q  74 cagttcagtccaataatgatttactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaat-gtttacaataa 172  Q
    |||||| ||||||  ||||  ||||||||  |||||||| ||||||||||| |||||||||||||||| |||||||||||| |||||| | |||||| ||    
T  37033080 cagttcggtccaaccatgacctactatggagaagagattaatctctccaatccactatcaatgagttc-ttacaaagagatgcaaaatggattacaagaa 37033178  T
Q  173 attattttcaacaaactatcatagaacaaacctaatttctac 214  Q
    ||||  |||||||| ||  || ||||||| ||||||||||||    
T  37033179 attagcttcaacaagctcacaaagaacaaccctaatttctac 37033220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 106 - 257
Target Start/End: Original strand, 4552677 - 4552827
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| || ||||||||||||| |||||||| ||||||||  | |||||| ||||||  |||||||| ||  || || ||||||||    
T  4552677 agagattgatctctccaatccattatcaatgagttc-ttacaaagggatacaaaggggttacaagaaattagcttcaacaagctcacaaaggacaaacct 4552775  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    ||||||||| | |||||||||||| | || || ||||||| ||||||||||||    
T  4552776 aatttctacccattttctcaatct-caccaatgaacaagacactcaatgattt 4552827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 98 - 214
Target Start/End: Complemental strand, 19752822 - 19752707
Alignment:
Q  98 tatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcataga 197  Q
    ||||||| ||||||| ||||||||||| | |||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || |||    
T  19752822 tatgggagagagattgatctctccaatcctctatcaatgagttc-ttacaaagagatacaaatcggttacaagaaattagcttcaacaagctcgcaaaga 19752724  T
Q  198 acaaacctaatttctac 214  Q
    |||| ||||||||||||    
T  19752723 acaaccctaatttctac 19752707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 105 - 275
Target Start/End: Original strand, 44650201 - 44650372
Alignment:
Q  105 aagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacc 204  Q
    |||||||| |||||| |||| |||||| ||||| || |||||||||||||| ||||  ||||||||||||||   | ||||||||  || ||||||||||    
T  44650201 aagagattgatctcttcaatccactattaatgaattatttacaaagagatataaaagatttacaataaattagcgttaacaaactcacaaagaacaaacc 44650300  T
Q  205 -taatttctactcttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
     |||||| |||  |||||||||||| |||| || ||||||| ||||||| | |||||||| ||||| ||||||    
T  44650301 ataatttttacatttttctcaatct-ctccaatgaacaagacactcaataattttcactcacccaaagtgttt 44650372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 47255380 - 47255487
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  47255380 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccct 47255478  T
Q  206 aatttctac 214  Q
    |||||||||    
T  47255479 aatttctac 47255487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 105 - 208
Target Start/End: Complemental strand, 6808582 - 6808479
Alignment:
Q  105 aagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacc 204  Q
    |||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||   |||||| || |||  |||||||| || ||  ||||||||||    
T  6808582 aagagattgatctctccaatccactataaatgagttctttacaaagagatacaaaagagttacaagaagttagcttcaacaagctctccaagaacaaacc 6808483  T
Q  205 taat 208  Q
    ||||    
T  6808482 taat 6808479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 8550827 - 8550996
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||| ||||||||    |||||| ||||||  || ||||| ||  || |||||||||||    
T  8550827 agagattgatctctccaatccactatcaatgagttc-ttacaaagggatacaaatgagttacaagaaattagcttaaacaagctcacaaagaacaaacct 8550925  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | ||||| |||||| | |  || ||||||| ||||||||| |||||||| ||||||||||||    
T  8550926 aatttctacccattttcccaatct-cacaaatgaacaagacactcaatgattttcactcacccaatgtgttt 8550996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 28265594 - 28265763
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| ||||||||| |||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  ||  |||||| |||    
T  28265594 agagattgatctctccaatccactatcaaagagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaatgaacaaccct 28265692  T
Q  206 aatttcta-ctcttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    |||||||| || ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  28265693 aatttctacctattttcccaatct-cgccaatgaacaagacactcaatgattttcactcacccaaggtgttt 28265763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 95 - 268
Target Start/End: Complemental strand, 41361053 - 41360881
Alignment:
Q  95 tactatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcat 194  Q
    |||||||||  ||| ||| ||||||  ||| ||||||||| |||||||| |||||||||||||||  | |||||| |||||| ||||||||| ||  ||     
T  41361053 tactatgggggagatattgatctctttaatccactatcaacgagttctt-acaaagagatacaaatgggttacaagaaattagtttcaacaagctcacaa 41360955  T
Q  195 agaacaaacctaatttctactc-ttttctcaatctcctcccataaacaagagactcaatgatttcactcgcccaa 268  Q
    |||||||||||||||||||| | ||||| |||||| | || || ||||||| |||||||  |||||||| |||||    
T  41360954 agaacaaacctaatttctacccattttcccaatct-caccaatgaacaagacactcaatattttcactcacccaa 41360881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 193740 - 193616
Alignment:
Q  105 aagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacc 204  Q
    |||||||| ||||||||||| |||||||||||||||  |||||||||||||||||    |||||| ||||||  |||||||| |||  | ||||||| ||    
T  193740 aagagattgatctctccaatccactatcaatgagtt-attacaaagagatacaaatgagttacaagaaattagcttcaacaagctaataaagaacaaccc 193642  T
Q  205 taatttctactc-ttttctcaatctc 229  Q
    |||||||||| | |||||||||||||    
T  193641 taatttctacccattttctcaatctc 193616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 37168426 - 37168318
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaat-gtttacaataaattattttcaacaaactatcatagaacaaacc 204  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||| | |||||| ||||||  || ||||| ||  || ||||||| ||    
T  37168426 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccc 37168328  T
Q  205 taatttctac 214  Q
    ||||||||||    
T  37168327 taatttctac 37168318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 105 - 220
Target Start/End: Complemental strand, 3460826 - 3460710
Alignment:
Q  105 aagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaac- 203  Q
    |||| ||| |||||||||||  |||||||||  |||||||||||||| |||||||| | |||||||||||||  |||||||| ||  || |||||||||     
T  3460826 aagatattgatctctccaatcgactatcaatatgttctttacaaagatatacaaaagggttacaataaattagcttcaacaagctcacaaagaacaaact 3460727  T
Q  204 ctaatttctactctttt 220  Q
    ||||||||||| |||||    
T  3460726 ctaatttctaccctttt 3460710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 11348826 - 11348719
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| ||| |||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| |||    
T  11348826 agagattgatctctccaatccactatcaatgagttc-ttagaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaaccct 11348728  T
Q  206 aatttctac 214  Q
    |||||||||    
T  11348727 aatttctac 11348719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 13547129 - 13547236
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||| ||  |||||||| ||  || ||||||| |||    
T  13547129 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaaatagcttcaacaagctcacaaagaacaaccct 13547227  T
Q  206 aatttctac 214  Q
    |||||||||    
T  13547228 aatttctac 13547236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 28220266 - 28220373
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  28220266 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaagaacaaccct 28220364  T
Q  206 aatttctac 214  Q
    |||||||||    
T  28220365 aatttctac 28220373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 37282731 - 37282811
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 186  Q
    ||||||||||||||||||| |||||  |||||||||||||||||||||| ||||| | |||| ||||||||  ||||||||    
T  37282731 agagatttatctctccaatccactactaatgagttctttacaaagagatgcaaaagggttaccataaattagcttcaacaa 37282811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 124 - 246
Target Start/End: Original strand, 16914232 - 16914355
Alignment:
Q  124 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaa-ttattttcaacaaactatcatagaacaaacctaatttctactcttttct 222  Q
    ||||||||||||||||||||||||||||||||||||| | ||| || ||| |||  |||||||  || ||  ||||||||| |||||| ||| | ||||     
T  16914232 ttcactatcaatgagttctttacaaagagatacaaaagggttagaagaaacttagcttcaacaggctctccaagaacaaacataatttttacccatttcc 16914331  T
Q  223 caatctcctcccataaacaagaga 246  Q
    ||||||| |||||| |||||||||    
T  16914332 caatctcttcccatgaacaagaga 16914355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 31659366 - 31659197
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||| ||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||  |||    
T  31659366 agagattgatctctccaatccactatcaataagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacagccct 31659268  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | ||||  |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  31659267 aatttctacccatttttccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 31659197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 44455288 - 44455119
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||| |||||||||    |||||| |||||| |||||||||  |  || ||||||| |||    
T  44455288 agagattgatctctccaatccactatcaatgagttc-ttacaaaaagatacaaatgagttacaagaaattagtttcaacaagttcacaaagaacaaccct 44455190  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaat-gatttcactcgcccaatgtgttt 275  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||| | |||||||| ||||| ||||||    
T  44455189 aatttctacccattttcccaatct-caccaatgaacaagacactcaatggttttcactcacccaaggtgttt 44455119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 22 - 214
Target Start/End: Complemental strand, 47115383 - 47115192
Alignment:
Q  22 aacaagataaagagggtggagaaaagagaacaacacatcaa-aaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctc 120  Q
    ||||||||||| || |  ||||||||| |||||||  |||| |||| || || |||||| |||||| |||||  |||| |||   ||||||| |||||||    
T  47115383 aacaagataaaaagagcagagaaaagataacaaca--tcaagaaatgttcacccagttcggtccaacaatgacctactctggagcagagattgatctctc 47115286  T
Q  121 caattcactatcaatgagttctttacaaagagatacaaaat-gtttacaataaattattttcaacaaactatcatagaacaaacctaatttctac 214  Q
    |||| ||||||||||| ||| |||||||||||||||||||| | |||||| ||||||  || ||||| ||  || ||||||| ||||||||||||    
T  47115285 caatccactatcaatgggtt-tttacaaagagatacaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttctac 47115192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 50167215 - 50167384
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| ||||||||||||||| ||||||||||||||||||  | |||||| ||||||  ||  |||| ||  || | ||||| |||    
T  50167215 agagattgatctctccaatccactatcaatgagtt-tttacaaagagatacaaatgggttacaagaaattagctttgacaagctcacaaataacaaccct 50167313  T
Q  206 aatttctact-cttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||||  ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  50167314 aatttctactaattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 50167384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 124 - 262
Target Start/End: Original strand, 1050501 - 1050639
Alignment:
Q  124 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctc 223  Q
    ||||||||||| ||||| |||||||||||| ||||||   |||||| ||||||  ||||| || || ||  |||||| |||||||||  || | |||| |    
T  1050501 ttcactatcaacgagttatttacaaagagacacaaaaatgttacaagaaattagcttcaataagctctcgaagaacacacctaattttcacccatttccc 1050600  T
Q  224 aatctcctcccataaacaagagactcaatgatttcactc 262  Q
    |||||| || ||| ||||||||||||||| |||||||||    
T  1050601 aatctcttcacatgaacaagagactcaataatttcactc 1050639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 96 - 186
Target Start/End: Complemental strand, 16455759 - 16455670
Alignment:
Q  96 actatgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 186  Q
    ||||||||| ||||||| ||||||||||| |||||||||||||||| ||||| |||||||||||  | |||||| ||||||  ||||||||    
T  16455759 actatgggagagagattgatctctccaatccactatcaatgagttc-ttacacagagatacaaatgggttacaagaaattagcttcaacaa 16455670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 257
Target Start/End: Complemental strand, 20762800 - 20762649
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||| ||||||||||||| | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  20762800 agagattgatctctccaatccactatcaatgagttc-ttacgaagagatacaaaagggttacaagaaattagctttgacaagttcacaaagaacaaccct 20762702  T
Q  206 aatttcta--ctcttttctcaatctcctcccataaacaagagactcaatgattt 257  Q
    ||||||||  || |||||||||||| | || || ||||||| ||||||||||||    
T  20762701 aatttctacccttttttctcaatct-caccaatgaacaagatactcaatgattt 20762649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 100 - 275
Target Start/End: Original strand, 3847155 - 3847330
Alignment:
Q  100 tgggaaagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaac 199  Q
    |||| |||||||  ||||||||||| |||||||||||||||| |||||||| ||||||||  | |||||| || |||  || ||||||||  || |||||    
T  3847155 tggggaagagatggatctctccaatccactatcaatgagttc-ttacaaagggatacaaatgggttacaaaaatttagcttaaacaaactcacaaagaac 3847253  T
Q  200 aaacctaatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    || |||||||||||| | ||||| |||||| | |  || ||||||| ||||||||| |||||||| ||||| ||||||    
T  3847254 aaccctaatttctacccattttcccaatct-cacaaatgaacaagacactcaatgattttcactcacccaaggtgttt 3847330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 15820435 - 15820332
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgt-ttacaataaattattttcaacaaactatcatagaacaaacc 204  Q
    |||||||||||||| |||| |||||||||||||||| ||| |||||||||| |||||| |||||| ||||||  |||||||| ||  || ||||||||||    
T  15820435 agagatttatctcttcaatgcactatcaatgagttc-ttaaaaagagatac-aaatgtgttacaagaaattagcttcaacaagctcacaaagaacaaacc 15820338  T
Q  205 taattt 210  Q
    ||||||    
T  15820337 taattt 15820332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 124 - 257
Target Start/End: Complemental strand, 25652197 - 25652064
Alignment:
Q  124 ttcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctactcttttctc 223  Q
    ||||||||||| ||||||||||||||||||||||| |   |||||| ||||||  ||||||||||| ||| | |||| || ||||||||||   ||||||    
T  25652197 ttcactatcaaagagttctttacaaagagatacaagagagttacaagaaattagcttcaacaaactctcaaataacacacttaatttctaccaatttctc 25652098  T
Q  224 aatctcctcccataaacaagagactcaatgattt 257  Q
    ||| |  || ||| ||||| | ||||||||||||    
T  25652097 aatattttctcatgaacaaaatactcaatgattt 25652064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 37503597 - 37503763
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||   | |||||| ||||||  ||||||||  |  || ||||||| |||    
T  37503597 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaa---ggttacaagaaattagcttcaacaagttcacaaagaacaaccct 37503692  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||| ||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  37503693 aatttttacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 37503763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 13549040 - 13549147
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||  ||||||  || ||||| ||  || ||||||| |||    
T  13549040 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacatgaaattaggtttaacaagctcacaaagaacaaccct 13549138  T
Q  206 aatttctac 214  Q
    |||||||||    
T  13549139 aatttctac 13549147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 28223461 - 28223540
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 186  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||    
T  28223461 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaa 28223540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 30476486 - 30476565
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 186  Q
    ||||||| |||| |||||| || ||||||||||||||| |||||||||||||||  | |||||||||||||| ||||||||    
T  30476486 agagattgatctgtccaatccagtatcaatgagttctt-acaaagagatacaaatgggttacaataaattatcttcaacaa 30476565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 186
Target Start/End: Original strand, 31925747 - 31925826
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 186  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  ||||||||    
T  31925747 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaa 31925826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 37559908 - 37560078
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta-ttttcaacaaactatcatagaacaaacc 204  Q
    ||||||| ||||||||||||||||||||| |||||| |||||||||||||||||  | |||||| ||||||  |||||||||  |  || |||||||  |    
T  37559908 agagattgatctctccaattcactatcaacgagttc-ttacaaagagatacaaatgggttacaagaaattagctttcaacaagttcacaaagaacaactc 37560006  T
Q  205 taatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    |||||||||| | |||||  ||||| | || || ||||||| ||||||||| |||||||| || |||||||||    
T  37560007 taatttctacccattttcctaatct-caccaatgaacaagacactcaatgattttcactcacctaatgtgttt 37560078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 1833650 - 1833481
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||    |||||| || |||  ||||| | | |  || ||||||| |||    
T  1833650 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaatgagttacaagaatttagcttcaatagattcacaaagaacaaccct 1833552  T
Q  206 aatttctactc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||| | ||||| |||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  1833551 aatttctacccattttcccaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 1833481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 185
Target Start/End: Complemental strand, 5460034 - 5459956
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaaca 185  Q
    ||||||| |||||||||||  ||||||||||||||||||||||||| ||| |||||| |||||| ||||||  |||||||    
T  5460034 agagattgatctctccaatctactatcaatgagttctttacaaagaaatataaaatg-ttacaagaaattagcttcaaca 5459956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 2263016 - 2263094
Alignment:
Q  108 agatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaa 186  Q
    ||||| |||||| |||| |||||||||| ||||||||||||| ||||| |||| | |||||| ||||||| ||||||||    
T  2263016 agattgatctcttcaatccactatcaataagttctttacaaaaagatataaaagggttacaagaaattatcttcaacaa 2263094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 158
Target Start/End: Complemental strand, 28242515 - 28242382
Alignment:
Q  22 aacaagataaagagggtggagaaaagagaacaacacatcaa-aaatatttactcagttcagtccaataatgatttactatgggaaagagatttatctctc 120  Q
    |||||||||||||| || ||||||||| ||||||||  ||| |||| || || |||||| |||||| |||||  |||| |||   ||||||| |||||||    
T  28242515 aacaagataaagagagtagagaaaagataacaacac--caagaaatgttcacccagttcggtccaacaatgacctactctggaggagagattgatctctc 28242418  T
Q  121 caattcactatcaatgagttctttacaaagagatacaa 158  Q
    |||| |||||| ||||||||| ||||||||||||||||    
T  28242417 caatccactat-aatgagttc-ttacaaagagatacaa 28242382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 114 - 246
Target Start/End: Complemental strand, 13938258 - 13938126
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatac-aaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttct 212  Q
    ||||||||||| |||||||||||||||  |||||||||||||| |||| | |||||| ||||||| ||  ||||  | ||  ||||| ||||||||||||    
T  13938258 atctctccaatccactatcaatgagtttcttacaaagagatacaaaaaaggttacaagaaattatattttacaagttctccaagaac-aacctaatttct 13938160  T
Q  213 actcttttctcaatctcctcccataaacaagaga 246  Q
    || | |||| ||||||| |||||  |||||||||    
T  13938159 acccatttcccaatctcttcccacgaacaagaga 13938126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 23555305 - 23555412
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| | ||||||||| |||||||||||||||| |||||||||||||||||    ||| || |||||| |||||||||  |  || ||||||| |||    
T  23555305 agagattgaactctccaatccactatcaatgagttc-ttacaaagagatacaaatgagttataagaaattagtttcaacaagttcacaaagaacaaccct 23555403  T
Q  206 aatttctac 214  Q
    |||||||||    
T  23555404 aatttctac 23555412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 29136375 - 29136268
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| ||| |||||||||||| ||||||||| |||||||  | || ||| ||||||  |||||||| ||  || ||||||| |||    
T  29136375 agagattgatctctccaatccacgatcaatgagttc-ttacaaagaaatacaaatgggttccaagaaattagcttcaacaagctcacaaagaacaaccct 29136277  T
Q  206 aatttctac 214  Q
    |||||||||    
T  29136276 aatttctac 29136268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 42298015 - 42298122
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| |||||| |||| |||||||||||||||| |||||||||||||||||    |||||| ||||||  |||||||| ||  || | ||||| |||    
T  42298015 agagattgatctcttcaatccactatcaatgagttc-ttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaaaaacaaccct 42298113  T
Q  206 aatttctac 214  Q
    |||||||||    
T  42298114 aatttctac 42298122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 275
Target Start/End: Original strand, 196956 - 197117
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 213  Q
    ||||||||||| |||||||||||||||||| |||||| ||||||||    |||||| ||||||  || ||||| ||  || ||||||| |||||||||||    
T  196956 atctctccaatccactatcaatgagttctt-acaaagggatacaaatgagttacaagaaattaacttaaacaagctcacaaagaacaaccctaatttcta 197054  T
Q  214 ctc-ttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    |   |||||||||||||  |  || ||||||| ||||||||| |||||||| ||||| ||||||    
T  197055 ccaattttctcaatctca-caaatgaacaagacactcaatgattttcactcacccaaggtgttt 197117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 213
Target Start/End: Original strand, 834215 - 834313
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 213  Q
    ||||||||||| |||||||||||||||| |||||||| ||||||||  | |||||| ||||||  || ||||| ||  || ||||||| |||||||||||    
T  834215 atctctccaatccactatcaatgagttc-ttacaaagggatacaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccctaatttcta 834313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 105 - 176
Target Start/End: Complemental strand, 2926638 - 2926567
Alignment:
Q  105 aagagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    |||||||| ||||||||||| ||||| |||||| ||| || ||||||||| ||||| | |||||||||||||    
T  2926638 aagagattgatctctccaatccactaccaatgaattcgtttcaaagagatgcaaaaaggttacaataaatta 2926567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 213
Target Start/End: Original strand, 13659376 - 13659482
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||| |||  | | |||| ||||||  |||||||| ||  || | ||||| |||    
T  13659376 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatataaatgggtaacaagaaattagcttcaacaagcttacaaaaaacaaccct 13659474  T
Q  206 aatttcta 213  Q
    ||||||||    
T  13659475 aatttcta 13659482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 3189458 - 3189405
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 160  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||| ||||||||||    
T  3189458 agagattgatctctccaatccactatcaatgagttc-ttacaaaaagatacaaaa 3189405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 3198275 - 3198222
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 160  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||| ||||||||||    
T  3198275 agagattgatctctccaatccactatcaatgagttc-ttacaaaaagatacaaaa 3198222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 3207114 - 3207061
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 160  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||| ||||||||||    
T  3207114 agagattgatctctccaatccactatcaatgagttc-ttacaaaaagatacaaaa 3207061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 275
Target Start/End: Complemental strand, 10925354 - 10925182
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttct--ttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaac 203  Q
    ||||||| || |||||||| |||||||||||| ||||  |||||||||||||||||    |||||| ||||||  |||||||| ||  || ||||||| |    
T  10925354 agagattgatttctccaatccactatcaatgaattcttcttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaaagaacaacc 10925255  T
Q  204 ctaatttcta-ctcttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
     ||||||||| |  |||| ||||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  10925254 ataatttctatccattttttcaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 10925182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 13316392 - 13316461
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    ||||||| | ||||||||| |||||||||||||||| || ||||||||||||||| | |||||| ||||||    
T  13316392 agagattgaactctccaatccactatcaatgagttc-ttccaaagagatacaaaagggttacaagaaatta 13316461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 34603705 - 34603597
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaat-gtttacaataaattattttcaacaaactatcatagaacaaacc 204  Q
    ||||||| |||||| |||| ||| |||||||||||| ||||||||||||| ||||| | |||||| ||||||  || ||||| ||  || ||||||| ||    
T  34603705 agagattgatctcttcaatccaccatcaatgagttc-ttacaaagagataaaaaatgggttacaagaaattagcttaaacaagctcacaaagaacaaccc 34603607  T
Q  205 taatttctac 214  Q
    ||||||||||    
T  34603606 taatttctac 34603597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 159
Target Start/End: Original strand, 45644402 - 45644446
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaa 159  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||    
T  45644402 atctctccaatccactatcaatgagttc-ttacaaagagatacaaa 45644446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 210
Target Start/End: Complemental strand, 46065046 - 46064943
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||| ||||||||| ||||||||||||||| |    |||||| ||||||  |||||| | ||  || |||||||||||    
T  46065046 agagattgatctctccaatccactatgaatgagttc-ttacaaagagatacacatgagttacaagaaattagcttcaacgagctcacaaagaacaaacct 46064948  T
Q  206 aattt 210  Q
    |||||    
T  46064947 aattt 46064943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 928025 - 928123
Alignment:
Q  115 tctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaa-cctaatttcta 213  Q
    |||||| ||| |||||| |||||||| ||||||||||||| ||||| | |||||| ||||||  |||||||| ||  || |||||||| |||||||||||    
T  928025 tctctctaatccactattaatgagtt-tttacaaagagatccaaaagggttacaagaaattagcttcaacaagctcacaaagaacaaaccctaatttcta 928123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 275
Target Start/End: Original strand, 13138016 - 13138183
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    |||||||  ||||| |||| ||||||||||| |||| |||||||||||| ||||  | |||||| ||||||  |||||||| ||  || |||||  ||||    
T  13138016 agagattgctctcttcaatccactatcaatgtgttc-ttacaaagagatgcaaatgggttacaagaaattagcttcaacaagctcacaaagaac-gacct 13138113  T
Q  206 aatttctactcttttctcaatctcctcccataaacaagagactcaatga-tttcactcgcccaatgtgttt 275  Q
    ||||||||  | ||| ||||||| | || || ||||||| ||||||||| |||||||| ||||| ||||||    
T  13138114 aatttctatccatttttcaatct-caccaatgaacaagacactcaatgattttcactcacccaaggtgttt 13138183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 118 - 156
Target Start/End: Original strand, 31065713 - 31065751
Alignment:
Q  118 ctccaattcactatcaatgagttctttacaaagagatac 156  Q
    ||||||||||||||||| |||||||||||||| ||||||    
T  31065713 ctccaattcactatcaaagagttctttacaaaaagatac 31065751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 116 - 210
Target Start/End: Complemental strand, 32471579 - 32471486
Alignment:
Q  116 ctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaattt 210  Q
    ||||| ||| |||||||||||||||  ||||||||||||||||||   || ||||||||||  |||||| |  | ||| ||||||||||||||||    
T  32471579 ctctcgaatccactatcaatgagtttcttacaaagagatacaaaagagttgcaataaattaacttcaac-agttctcaaagaacaaacctaattt 32471486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 51765525 - 51765471
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 160  Q
    ||||||| | ||||||||| ||||||||||||||||||   ||||||||||||||    
T  51765525 agagattgaactctccaatccactatcaatgagttcttacaaaagagatacaaaa 51765471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 6398680 - 6398631
Alignment:
Q  201 aacctaatttctactcttttctcaatctcctcccataaacaagagactca 250  Q
    |||||||||||||||| |||| ||||||| |||||| ||||||| |||||    
T  6398680 aacctaatttctactcatttcccaatctcttcccatgaacaagaaactca 6398631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 37876806 - 37876858
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 159  Q
    ||||||| |||||| |||| |||||||||||||||  |||||||||||||||||    
T  37876806 agagattgatctctgcaatccactatcaatgagtt-attacaaagagatacaaa 37876858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 50169250 - 50169302
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 159  Q
    ||||||| |||||| |||| |||||||||||||| | |||||||||||||||||    
T  50169250 agagattgatctcttcaatccactatcaatgagtac-ttacaaagagatacaaa 50169302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 156
Target Start/End: Complemental strand, 6398764 - 6398724
Alignment:
Q  116 ctctccaattcactatcaatgagttctttacaaagagatac 156  Q
    |||||||||||||||||||||||||  ||||||||| ||||    
T  6398764 ctctccaattcactatcaatgagtttcttacaaagatatac 6398724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 114 - 275
Target Start/End: Complemental strand, 25174 - 25012
Alignment:
Q  114 atctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttcta 213  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||| | |||||| ||||||  ||||||||||| ||| |||||||| ||| ||||||    
T  25174 atctctctacttcactatcaatgagttctttacaaagagatacaaaaaggttacaagaaattaccttcaacaaactctcaaagaacaaaactagtttcta 25075  T
Q  214 ctcttttctc-aatctcctcccataaacaagagactcaatgatttcactcgcccaatgtgttt 275  Q
    |  ||||| | |||||  ||   | | ||| ||||||||||||||||||| ||||| ||||||    
T  25074 ccattttcccgaatcttgtcatgtgatcaacagactcaatgatttcactctcccaaggtgttt 25012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 10617 - 10548
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    ||||||| |||||| |||| ||||||||| |||||||| |||||||||||||||||| |||||||||||||    
T  10617 agagattgatctcttcaatccactatcaacgagttctt-acaaagagatacaaaatggttacaataaatta 10548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 214
Target Start/End: Complemental strand, 7455 - 7348
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| |||| |||||| |||||||||||||||| |||||||||||||||||  | |||||| ||||||  |||||||| ||  || ||||||| | |    
T  7455 agagattgatctttccaatccactatcaatgagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagctcacaaagaacaacctt 7357  T
Q  206 aatttctac 214  Q
    |||||||||    
T  7356 aatttctac 7348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 114730 - 114677
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaa 160  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  114730 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatacaaaa 114677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 214
Target Start/End: Original strand, 18044 - 18150
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| ||||||||||||||  ||||||||||||||||||    |||||| ||||||  |||||||| ||  ||  |||||| |||    
T  18044 agagattgatctctccaatccactatcaatgagt--tttacaaagagatacaaatgagttacaagaaattagcttcaacaagctcacaatgaacaaccct 18141  T
Q  206 aatttctac 214  Q
    |||||||||    
T  18142 aatttctac 18150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 229
Target Start/End: Original strand, 20455 - 20578
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| || |||||| |||||| |||||||||||||||||  | |||||| ||||||  ||||||||  |  || | |||||||||    
T  20455 agagattgatctctccaatccaatatcaaagagttc-ttacaaagagatacaaatgggttacaagaaattagcttcaacaagttcacaaaaaacaaacct 20553  T
Q  206 aatttctactc-ttttctcaatctc 229  Q
    ||||||| ||| ||||| |||||||    
T  20554 aatttctgctcattttcccaatctc 20578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 213
Target Start/End: Original strand, 149137 - 149243
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||| |||  | | |||| ||||||  |||||||| ||  || | ||||| |||    
T  149137 agagattgatctctccaatccactatcaatgagttc-ttacaaagagatataaatgggtaacaagaaattagcttcaacaagcttacaaaaaacaaccct 149235  T
Q  206 aatttcta 213  Q
    ||||||||    
T  149236 aatttcta 149243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 223
Target Start/End: Original strand, 11201 - 11318
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacct 205  Q
    ||||||| | ||||||||| ||||||||| ||||||||   |||||||||||||| | |||||| ||||||  ||  ||||  |  || ||||||| |||    
T  11201 agagattgaactctccaatccactatcaacgagttcttacaaaagagatacaaaagggttacaagaaattagattttacaagttcacaaagaacaaccct 11300  T
Q  206 aatttctactcttttctc 223  Q
    ||||||||| ||||||||    
T  11301 aatttctacccttttctc 11318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 8775 - 8845
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    ||||||| | ||||||||| ||||||||| ||||||||   |||||||||||||| | |||||| ||||||    
T  8775 agagattgaactctccaatccactatcaacgagttcttacaaaagagatacaaaagggttacaagaaatta 8845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 106 - 159
Target Start/End: Complemental strand, 11685 - 11633
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaa 159  Q
    ||||||| | ||||||||| |||||||||||||||| |||||||||||||||||    
T  11685 agagattgaactctccaatccactatcaatgagttc-ttacaaagagatacaaa 11633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 1043 - 975
Alignment:
Q  106 agagatttatctctccaattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaatta 176  Q
    ||||||| | ||||||||| ||||||||||||||| ||  ||||||||||||||| | |||||| ||||||    
T  1043 agagattgaactctccaatccactatcaatgagttgtt--caaagagatacaaaagggttacaagaaatta 975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 121 - 214
Target Start/End: Original strand, 80338 - 80430
Alignment:
Q  121 caattcactatcaatgagttctttacaaagagatacaaaatgtttacaataaattattttcaacaaactatcatagaacaaacctaatttctac 214  Q
    |||||||||||| |||||||||| ||||| |||||||||  | || ||| ||||||  |||||||| ||  || ||||||| ||||||||||||    
T  80338 caattcactatctatgagttctt-acaaaaagatacaaatgggttgcaagaaattagcttcaacaagctcacaaagaacaaccctaatttctac 80430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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