View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14040_low_33 (Length: 284)
Name: NF14040_low_33
Description: NF14040
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14040_low_33 |
 | |
|
| [»] scaffold0485 (1 HSPs) |
| | |
|
| [»] scaffold0090 (1 HSPs) |
| | |
|
| [»] scaffold0035 (1 HSPs) |
| | |
|
| [»] scaffold0220 (1 HSPs) |
| | |
|
| [»] scaffold0566 (1 HSPs) |
| | |
|
| [»] scaffold0222 (1 HSPs) |
| | |
|
| [»] scaffold0026 (1 HSPs) |
| | |
|
| [»] scaffold0113 (1 HSPs) |
| | |
|
| [»] scaffold0012 (2 HSPs) |
| | |
|
| [»] scaffold1184 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 211; Significance: 1e-116; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 22 - 276
Target Start/End: Complemental strand, 4311532 - 4311279
Alignment:
| Q |
22 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatg |
121 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
4311532 |
ttgtacatgtgggttagtaccaacgtaaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaata |
4311433 |
T |
|
| Q |
122 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcc |
221 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4311432 |
attctccattcatattggtaattgtgagtagggccatgggttctaagaaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcc |
4311333 |
T |
|
| Q |
222 |
tcttgatcccttgattcacactcaccccaaacttcctagaaataagggtgatgat |
276 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||||||||||||||| ||||||||| |
|
|
| T |
4311332 |
tcttgatctcttgattcacactc-ccccaaacttcctagaaataaaggtgatgat |
4311279 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 22 - 276
Target Start/End: Original strand, 16327176 - 16327430
Alignment:
| Q |
22 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatg |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
16327176 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaatagtcaaacaattagctctaata |
16327275 |
T |
|
| Q |
122 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcc |
221 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
16327276 |
attctccattcatattggtaattgtgagtagggtcatgggttataaggaaggacaaagtagtaagagtatataagtttagataatagttttcctctatcc |
16327375 |
T |
|
| Q |
222 |
tcttgatcccttgattcacactcaccccaaacttcctagaaataagggtgatgat |
276 |
Q |
| |
|
||||||||||||||||||||||||||| |||| || ||| ||||| |||||||| |
|
|
| T |
16327376 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
16327430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 22 - 276
Target Start/End: Original strand, 8783498 - 8783752
Alignment:
| Q |
22 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatg |
121 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| ||||||| |||||||||||| ||||| || |||| |
|
|
| T |
8783498 |
ttgtacatgtgggttagtaccaacataaagcaaattttccaccacctccggattagttatgtccgaattagggagaataatcaaaaaattatctgtaata |
8783597 |
T |
|
| Q |
122 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcc |
221 |
Q |
| |
|
||||||| |||||||| |||||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8783598 |
attctcctttcatatttgtaattgtgagtagggccatgggttgtaaggaagggcaaagtagtgagagtatataagtctagataatagttcccctctatcc |
8783697 |
T |
|
| Q |
222 |
tcttgatcccttgattcacactcaccccaaacttcctagaaataagggtgatgat |
276 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
8783698 |
ccttgatccattgattcacactcaccccaaacttcctagcaataaaggtgatgat |
8783752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 22 - 276
Target Start/End: Original strand, 540168 - 540416
Alignment:
| Q |
22 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatg |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| ||||| |
|
|
| T |
540168 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctttaatg |
540267 |
T |
|
| Q |
122 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcc |
221 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||| |||| ||||||||||||| | ||||||| |
|
|
| T |
540268 |
attctcctttcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc |
540361 |
T |
|
| Q |
222 |
tcttgatcccttgattcacactcaccccaaacttcctagaaataagggtgatgat |
276 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||| ||||| |||||||| |
|
|
| T |
540362 |
tcttgatcccttgattcacactcaccccaaacttcttagcaataaaagtgatgat |
540416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 22 - 276
Target Start/End: Complemental strand, 9581707 - 9581453
Alignment:
| Q |
22 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatg |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
9581707 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccagattagtaatgtccgaattaggtagaataatcaaacaattagttctaata |
9581608 |
T |
|
| Q |
122 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcc |
221 |
Q |
| |
|
|| |||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| | ||||||| || | ||||||| |
|
|
| T |
9581607 |
atcctccattcatattgataattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcc |
9581508 |
T |
|
| Q |
222 |
tcttgatcccttgattcacactcaccccaaacttcctagaaataagggtgatgat |
276 |
Q |
| |
|
||||||||||||||||||||||||||| |||| || ||| ||||| |||||||| |
|
|
| T |
9581507 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
9581453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 22 - 276
Target Start/End: Complemental strand, 9729559 - 9729305
Alignment:
| Q |
22 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatg |
121 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
9729559 |
ttgtacctgtggattagtaccaacataaagcaaattttccaccacctccggattagtaatgtctgaattaggtagaataatcaaacaattagttctaata |
9729460 |
T |
|
| Q |
122 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcc |
221 |
Q |
| |
|
|| |||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| | ||||||| || | ||||||| |
|
|
| T |
9729459 |
atcctccattcatattgataattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcc |
9729360 |
T |
|
| Q |
222 |
tcttgatcccttgattcacactcaccccaaacttcctagaaataagggtgatgat |
276 |
Q |
| |
|
||||||||||||||||||||||||||| |||| || ||| ||||| |||||||| |
|
|
| T |
9729359 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
9729305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 107 - 276
Target Start/End: Original strand, 14223144 - 14223313
Alignment:
| Q |
107 |
caattagctctaatgattctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataat |
206 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||||||||||||| |||||||| |
|
|
| T |
14223144 |
caattagctctaatgattctccattcatattggtaattgtgagtagggtcatgggctttaaggaatgacaaagtagtgagagtatataagtttagataat |
14223243 |
T |
|
| Q |
207 |
agttcccctctatcctcttgatcccttgattcacactcaccccaaacttcctagaaataagggtgatgat |
276 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||||||||||||||| ||| ||||| |||||||| |
|
|
| T |
14223244 |
agttctcctctttcctcttgatcccttgattcacactcaccccaaacttcttagcaataaaagtgatgat |
14223313 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 23 - 233
Target Start/End: Complemental strand, 23513873 - 23513661
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||||||||||||||| |||||||||| || ||||| |||||||| ||||||||||||||| ||||||||||||||||||| ||||||| || ||| |
|
|
| T |
23513873 |
tgtacctgtgggttagtgccaacataaacaaagttttctaccacctccggattagtaatgtccgaattaggtagaataatcaagtaattagcattattga |
23513774 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgggttct--aaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatc |
220 |
Q |
| |
|
|||||| |||||| |||||||||||| |||| ||||| |||| || || ||| |||||||| || | |||||||||||| ||||| ||||| ||| |
|
|
| T |
23513773 |
ctctccactcatataggtaattgtgagaagggccatggattctaaaaaaaaaaacatggtagtgagggtttctaagtctagatagtagtttccctcaatc |
23513674 |
T |
|
| Q |
221 |
ctcttgatccctt |
233 |
Q |
| |
|
|| || ||||||| |
|
|
| T |
23513673 |
ctatttatccctt |
23513661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 4462117 - 4462261
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
|||||| ||||||||||||||| ||||||||||||||||||||||| || ||||| ||| | ||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4462117 |
tgtaccagtgggttagtaccaatataaagcaaattttccaccaccttcgggttagttatgaacggattaggtagaataatcaaacaatgagctctaatga |
4462216 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaa |
167 |
Q |
| |
|
|| || | |||||||||| ||||||||| || |||| ||||||| |
|
|
| T |
4462217 |
ttttctaatcatattggtcattgtgagtcggtccatgagttctaa |
4462261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 23 - 160
Target Start/End: Complemental strand, 13741225 - 13741088
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||||||||| ||||| |||||||||| | ||||| |||||||| | ||||||||||||| ||||||||||||||||||| |||||| | || ||| |
|
|
| T |
13741225 |
tgtacctgtggattagtgccaacataaacatagttttctaccacctccgaattagtaatgtccgaattaggtagaataatcaagcaattatcattattga |
13741126 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgg |
160 |
Q |
| |
|
|||||| ||||||||||||||||||| |||| ||||| |
|
|
| T |
13741125 |
ctctccactcatattggtaattgtgagaagggccatgg |
13741088 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 23 - 167
Target Start/End: Complemental strand, 5395944 - 5395800
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| ||||| |||||||| ||||||||||| || ||||||||||||||||||| ||||||| || ||| |
|
|
| T |
5395944 |
tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatatctgaattaggtagaataatcaagaaattagcattattga |
5395845 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaa |
167 |
Q |
| |
|
||||| |||| ||||||||||| || |||||| ||| |||||| |
|
|
| T |
5395844 |
cgctccactcattttggtaattgttagaagggtcgtggattctaa |
5395800 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 10439748 - 10439892
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| ||||| ||||||| | |||||||| || ||||||||||||||||||| ||||| | || ||| |
|
|
| T |
10439748 |
tgtacctgtgggttagtgccaacataaaccaagttttctaccaccttcagcttagtaatatctgaattaggtagaataatcaagaaattatcattattga |
10439847 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaa |
167 |
Q |
| |
|
|||||| ||||||||||||||||||| |||| ||||||||||| |
|
|
| T |
10439848 |
ctctccactcatattggtaattgtgagaagggctatgggttctaa |
10439892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 23 - 160
Target Start/End: Complemental strand, 12565807 - 12565670
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
|||||| ||||||||||||||||||||| ||| ||||| |||||||| | ||||||||| || |||||||| ||||||||| ||||||| || ||| |
|
|
| T |
12565807 |
tgtaccggtgggttagtaccaacataaaccaagttttctaccacctccgaattagtaatatctgaattaggttaaataatcaagaaattagcattattga |
12565708 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgg |
160 |
Q |
| |
|
|||||| |||||||||||||||| || |||| ||||| |
|
|
| T |
12565707 |
ctctccactcatattggtaattgttagaagggccatgg |
12565670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 203; Significance: 1e-111; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 22 - 276
Target Start/End: Original strand, 14687181 - 14687435
Alignment:
| Q |
22 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatg |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||| ||||||||||||||||||||||| |
|
|
| T |
14687181 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccgcctccggattagtaatgtccgaattaggtagcataatcaaacaattagctctaata |
14687280 |
T |
|
| Q |
122 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcc |
221 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||||| |
|
|
| T |
14687281 |
attctccatttatattggtaattgtgagtagggtcatgggttctaaggaatgacaaagtagtgagagtatataagtttagataatagttctcctctatcc |
14687380 |
T |
|
| Q |
222 |
tcttgatcccttgattcacactcaccccaaacttcctagaaataagggtgatgat |
276 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||| ||||| |||||||| |
|
|
| T |
14687381 |
tcttgatcccttgattcacactcaccccaaacttcttagcaataaaagtgatgat |
14687435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 22 - 276
Target Start/End: Original strand, 15349253 - 15349501
Alignment:
| Q |
22 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatg |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
15349253 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg |
15349352 |
T |
|
| Q |
122 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcc |
221 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||| |||||| |||| ||||||||||||| | ||||||| |
|
|
| T |
15349353 |
attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc |
15349446 |
T |
|
| Q |
222 |
tcttgatcccttgattcacactcaccccaaacttcctagaaataagggtgatgat |
276 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| ||| ||||| |||||||| |
|
|
| T |
15349447 |
tcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
15349501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 22 - 266
Target Start/End: Original strand, 42711184 - 42711428
Alignment:
| Q |
22 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatg |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
42711184 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagttctaata |
42711283 |
T |
|
| Q |
122 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcc |
221 |
Q |
| |
|
||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||||||||||||| | ||||||| || | ||||||| |
|
|
| T |
42711284 |
attctccattcatattggtaattatgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcc |
42711383 |
T |
|
| Q |
222 |
tcttgatcccttgattcacactcaccccaaacttcctagaaataa |
266 |
Q |
| |
|
||||||||| ||||||||||||||||| |||| || ||| ||||| |
|
|
| T |
42711384 |
tcttgatcctttgattcacactcaccctaaacctcttagcaataa |
42711428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 23 - 233
Target Start/End: Original strand, 11498023 - 11498233
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| ||||| |||||||| ||||||||||| | ||||||||||||||||||| |||||| | | ||| |
|
|
| T |
11498023 |
tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatatttgaattaggtagaataatcaagcaattaacataattga |
11498122 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcct |
222 |
Q |
| |
|
|||||| |||||||||||||||| || ||||||||| |||||| || ||| |||||||| || | |||||||||||| ||||| ||||| ||||| |
|
|
| T |
11498123 |
ctctccactcatattggtaattgttagaagggtcatgaattctaaaaaaaaacatggtagtgagggtttctaagtctagatagtagtttccctcaatcct |
11498222 |
T |
|
| Q |
223 |
cttgatccctt |
233 |
Q |
| |
|
|| ||||||| |
|
|
| T |
11498223 |
atttatccctt |
11498233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 45240267 - 45240404
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaa-ttagctctaatg |
121 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| ||||| |||||||| ||||||||||| | | |||| |||||||||||||| ||| ||||| || || |
|
|
| T |
45240267 |
tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatattcgaatttggtagaataatcaagcaatttagcgttattg |
45240366 |
T |
|
| Q |
122 |
attctccattcatattggtaattgtgagtagggtcatg |
159 |
Q |
| |
|
| |||||| ||||||||||||||||||| |||| |||| |
|
|
| T |
45240367 |
actctccactcatattggtaattgtgagaagggccatg |
45240404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 233
Target Start/End: Complemental strand, 10629551 - 10629345
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||||||||||||||| |||||||||| | ||||| ||| ||| ||||||||||| || ||||||||||||||||||| ||||||| || ||| |
|
|
| T |
10629551 |
tgtacctgtgggttagtgccaacataaa---agttttctaccgccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga |
10629455 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcct |
222 |
Q |
| |
|
|||||| ||||||||| ||||||||| |||| ||||| |||||| || ||| |||||||| || | ||||| |||||| ||||| ||||| ||||| |
|
|
| T |
10629454 |
ctctccactcatattgggaattgtgagaagggccatggattctaa-aaaaaacatggtagtgagggtttctaagtatagatagtagtttccctcaatcct |
10629356 |
T |
|
| Q |
223 |
cttgatccctt |
233 |
Q |
| |
|
|| ||||||| |
|
|
| T |
10629355 |
atttatccctt |
10629345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 23 - 167
Target Start/End: Complemental strand, 18290824 - 18290680
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| ||||| | |||||| ||||||||||| || ||||||||||||||||||| |||| || || ||| |
|
|
| T |
18290824 |
tgtacctgtgggttagtgccaacataaaccaagttttctatcacctccggattagtaatatctgaattaggtagaataatcaataaatttgcattattga |
18290725 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaa |
167 |
Q |
| |
|
| |||| |||||||||||||||| || |||| | ||| |||||| |
|
|
| T |
18290724 |
atttccactcatattggtaattgttagaagggccgtggattctaa |
18290680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 40 - 149
Target Start/End: Original strand, 11918125 - 11918233
Alignment:
| Q |
40 |
accaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatgattctccattcatattgg |
139 |
Q |
| |
|
||||||||||| ||| ||||||||||||| || ||||| |||||| ||||||||||||||||||| ||||||| ||| ||| | |||| ||||||||| |
|
|
| T |
11918125 |
accaacataaaacaatttttccaccaccttcgggttagttatgtccggattaggtagaataatcaaa-aattagccctattgactttccactcatattgg |
11918223 |
T |
|
| Q |
140 |
taattgtgag |
149 |
Q |
| |
|
|||||||||| |
|
|
| T |
11918224 |
taattgtgag |
11918233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0485 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: scaffold0485
Description:
Target: scaffold0485; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 22 - 276
Target Start/End: Original strand, 11313 - 11568
Alignment:
| Q |
22 |
ttgtacctgtgggttagtaccaacataaagcaaatttt-ccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaat |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
11313 |
ttgtacctgtgggttagtaccaacataaagcaaatttttccaccacctccagattagttatgtccggattaggtagaataatcaaacaattagctctaat |
11412 |
T |
|
| Q |
121 |
gattctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatc |
220 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
11413 |
aattctccactcatattggtaattgtgagtatggtcatgggttctaaggaaggacaaagtagtgagattatataagtctagataatagttcccctctatc |
11512 |
T |
|
| Q |
221 |
ctcttgatcccttgattcacactcaccccaaacttcctagaaataagggtgatgat |
276 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||| ||||| ||||||||| |
|
|
| T |
11513 |
ctcttgatcccttgattcacactcaccccaaactttctagcaataaaggtgatgat |
11568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 4)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 22 - 255
Target Start/End: Complemental strand, 20001103 - 20000870
Alignment:
| Q |
22 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatg |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
20001103 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccagattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg |
20001004 |
T |
|
| Q |
122 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcc |
221 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||| ||||||||||||| | ||||||| |
|
|
| T |
20001003 |
attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtgagagtataaaagtttagataatagttctcatctatcc |
20000904 |
T |
|
| Q |
222 |
tcttgatcccttgattcacactcaccccaaactt |
255 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
20000903 |
tcttgatcccttgattcacactcaccccaaactt |
20000870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 23 - 241
Target Start/End: Original strand, 20040479 - 20040697
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||||||||||||||| |||||||||| | | ||||| |||||||||||||||||||| || ||||||||||||||||||| |||||| || ||| |
|
|
| T |
20040479 |
tgtacctgtgggttagtgccaacataaacctagttttctaccacctctggattagtaatatctgaattaggtagaataatcaagaaattagtagtattga |
20040578 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcct |
222 |
Q |
| |
|
|||||| ||||||||||||||||||| |||| |||| |||||| || ||| |||||||| || | |||||||||||| ||||| ||||| ||||| |
|
|
| T |
20040579 |
ctctccactcatattggtaattgtgagaagggccatgaattctaaaaaaaaacatggtagtgagggtttctaagtctagatagtagtttccctcaatcct |
20040678 |
T |
|
| Q |
223 |
cttgatcccttgattcaca |
241 |
Q |
| |
|
|| ||||||| ||||||| |
|
|
| T |
20040679 |
atttatccctttattcaca |
20040697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 23 - 233
Target Start/End: Original strand, 21855186 - 21855392
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||||||| ||||||| |||||||||| | ||||| ||||||| ||||||||||| || ||||||||||||||||||| ||||||| || ||| |
|
|
| T |
21855186 |
tgtacctgtaggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga |
21855282 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcct |
222 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||| ||||||||||| || ||| |||||||| |||| ||||||||| || ||||| ||||| ||| | |
|
|
| T |
21855283 |
ctctccactcatattggtaattgtgagaagggttatgggttctaa-taaaaacatggtagtgagggtatctaagtctaggtagtagtttccctcaatcat |
21855381 |
T |
|
| Q |
223 |
cttgatccctt |
233 |
Q |
| |
|
|| ||||||| |
|
|
| T |
21855382 |
atttatccctt |
21855392 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 159
Target Start/End: Complemental strand, 17619545 - 17619412
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||||||||||||||| |||||||||| | ||||| ||||||| ||||||||||| || ||||||||||||||||||| ||||||| || ||| |
|
|
| T |
17619545 |
tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga |
17619449 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatg |
159 |
Q |
| |
|
|||||| ||||||||| ||||||||| |||| |||| |
|
|
| T |
17619448 |
ctctccactcatattggaaattgtgagaagggccatg |
17619412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0090 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0090
Description:
Target: scaffold0090; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 22 - 276
Target Start/End: Complemental strand, 29566 - 29312
Alignment:
| Q |
22 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatg |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||| |
|
|
| T |
29566 |
ttgtacctgtgggttagtaccaacataaagcaaattttctaccacctccggattagtaatgtccgaattaggtagaataatcatacaattagctctaatg |
29467 |
T |
|
| Q |
122 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcc |
221 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||| ||||||||||||| | ||||||| |
|
|
| T |
29466 |
attctccattcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagtagtgagagtataaaagtttagataatagttctcatctatcc |
29367 |
T |
|
| Q |
222 |
tcttgatcccttgattcacactcaccccaaacttcctagaaataagggtgatgat |
276 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| ||| ||||| |||||||| |
|
|
| T |
29366 |
tcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
29312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0035 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: scaffold0035
Description:
Target: scaffold0035; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 22 - 276
Target Start/End: Original strand, 51962 - 52216
Alignment:
| Q |
22 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatg |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||| ||||||||||||||||||| |
|
|
| T |
51962 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggaatagtaatgtccgaattaggtagaatagtcaaacaattagctctaata |
52061 |
T |
|
| Q |
122 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcc |
221 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
52062 |
attctccattcatattggtaattgtgagtagggtcatgggttataaggaaggacaaagtagtaagagtatataagtttagataatagttttcctctatcc |
52161 |
T |
|
| Q |
222 |
tcttgatcccttgattcacactcaccccaaacttcctagaaataagggtgatgat |
276 |
Q |
| |
|
||||||||||||||||||||||||||| |||| || ||| ||||| |||||||| |
|
|
| T |
52162 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagtgatgat |
52216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 22 - 276
Target Start/End: Complemental strand, 15024508 - 15024254
Alignment:
| Q |
22 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatg |
121 |
Q |
| |
|
|||||| ||||| ||||||||||||||| ||||||||||||||||||| |||||||| ||||| ||||||||||||||| ||||||||||||||| | |
|
|
| T |
15024508 |
ttgtacatgtggattagtaccaacataatgcaaattttccaccacctccggattagttatgtctggattaggtagaataataaaacaattagctctatta |
15024409 |
T |
|
| Q |
122 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcc |
221 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||| |
|
|
| T |
15024408 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtatagataatagtacccctctatcc |
15024309 |
T |
|
| Q |
222 |
tcttgatcccttgattcacactcaccccaaacttcctagaaataagggtgatgat |
276 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| ||||| |||||||| |
|
|
| T |
15024308 |
tcttgatcccttgattcacactcaccccaaactttctagcaataaaagtgatgat |
15024254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 22 - 279
Target Start/End: Original strand, 12777913 - 12778170
Alignment:
| Q |
22 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatg |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||||||||||||||| |||||| |
|
|
| T |
12777913 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccgaattagtaatgtccgaattaggtagaataatcaaacaattagttctaata |
12778012 |
T |
|
| Q |
122 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcc |
221 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||||||| || ||||||||| |
|
|
| T |
12778013 |
attctccattcatattgataattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtaaataagtttggataataattttcctctatcc |
12778112 |
T |
|
| Q |
222 |
tcttgatcccttgattcacactcaccccaaacttcctagaaataagggtgatgatgtc |
279 |
Q |
| |
|
||||||||||||||||||||||||||| |||| || ||| ||||| | ||||||||| |
|
|
| T |
12778113 |
tcttgatcccttgattcacactcaccctaaacctcttagcaataaaagggatgatgtc |
12778170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 22 - 276
Target Start/End: Complemental strand, 6813667 - 6813419
Alignment:
| Q |
22 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatg |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
6813667 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg |
6813568 |
T |
|
| Q |
122 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcc |
221 |
Q |
| |
|
||||||||| ||||||||||||||||||||| ||||||| || ||||||| |||||||| |||||| |||| ||||||||||||| | ||||||| |
|
|
| T |
6813567 |
attctccatgcatattggtaattgtgagtagagtcatggtttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc |
6813474 |
T |
|
| Q |
222 |
tcttgatcccttgattcacactcaccccaaacttcctagaaataagggtgatgat |
276 |
Q |
| |
|
|||||||||||||||||| ||||||| |||||||| ||| ||||| |||||||| |
|
|
| T |
6813473 |
tcttgatcccttgattcatactcacctcaaacttcttagcaataaaagtgatgat |
6813419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 241
Target Start/End: Complemental strand, 20562153 - 20561936
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||||||||||||||| |||||| ||| | | ||||| |||||||| | ||||||||| || ||||||||||||||||||| |||||| || ||| |
|
|
| T |
20562153 |
tgtacctgtgggttagtgccaacacaaacctagttttctaccacctccgaattagtaatatctgaattaggtagaataatcaagaaattagtagtattga |
20562054 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcct |
222 |
Q |
| |
|
|||||| ||||||||||||||||||| |||| |||| |||||| || ||| |||||||| || | |||||||||||| ||||| ||||| ||||| |
|
|
| T |
20562053 |
ctctccactcatattggtaattgtgagaagggccatgaattctaa-aaaaaacatggtagtgagggtttctaagtctagatagtagtttccctcaatcct |
20561955 |
T |
|
| Q |
223 |
cttgatcccttgattcaca |
241 |
Q |
| |
|
|| ||||||| ||||||| |
|
|
| T |
20561954 |
atttatccctttattcaca |
20561936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 241
Target Start/End: Complemental strand, 20564461 - 20564244
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||||||||||||||| |||||| ||| | | ||||| |||||||| | ||||||||| || ||||||||||||||||||| |||||| || ||| |
|
|
| T |
20564461 |
tgtacctgtgggttagtgccaacacaaacctagttttctaccacctccgaattagtaatatctgaattaggtagaataatcaagaaattagtagtattga |
20564362 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcct |
222 |
Q |
| |
|
|||||| ||||||||||||||||||| |||| |||| |||||| || ||| |||||||| || | |||||||||||| ||||| ||||| ||||| |
|
|
| T |
20564361 |
ctctccactcatattggtaattgtgagaagggccatgaattctaa-aaaaaacatggtagtgagggtttctaagtctagatagtagtttccctcaatcct |
20564263 |
T |
|
| Q |
223 |
cttgatcccttgattcaca |
241 |
Q |
| |
|
|| ||||||| ||||||| |
|
|
| T |
20564262 |
atttatccctttattcaca |
20564244 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 23 - 241
Target Start/End: Complemental strand, 20559845 - 20559628
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
|||| |||||||||||| |||||| ||| | | ||||| |||||||| | ||||||||| || ||||||||||||||||||| |||||| || ||| |
|
|
| T |
20559845 |
tgtatctgtgggttagtgccaacacaaacctagttttctaccacctccgaattagtaatatctgaattaggtagaataatcaagaaattagtagtattga |
20559746 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcct |
222 |
Q |
| |
|
|||||| ||||||||||||||||||| |||| |||| |||||| || ||| |||||||| || | |||||||||||| ||||| ||||| ||||| |
|
|
| T |
20559745 |
ctctccactcatattggtaattgtgagaagggccatgaattctaa-aaaaaacatggtagtgagggtttctaagtctagatagtagtttccctcaatcct |
20559647 |
T |
|
| Q |
223 |
cttgatcccttgattcaca |
241 |
Q |
| |
|
|| ||||||| ||||||| |
|
|
| T |
20559646 |
atttatccctttattcaca |
20559628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 13090217 - 13090358
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||||||||||||||| |||||||||| | ||||| ||||||| ||||||||||| || ||||||||||||||||||| ||||||| || ||| |
|
|
| T |
13090217 |
tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga |
13090313 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaa |
167 |
Q |
| |
|
|| ||| ||||||||| ||||||||| |||| ||||| |||||| |
|
|
| T |
13090314 |
ctcaccactcatattgggaattgtgagaagggccatggattctaa |
13090358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 233
Target Start/End: Original strand, 9362367 - 9362573
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||||||||||||||| |||||||||| | ||||| ||||||| ||||||||||| | ||||||||||||||||||| ||||||| || ||| |
|
|
| T |
9362367 |
tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatttgaattaggtagaataatcaagaaattagcattattga |
9362463 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcct |
222 |
Q |
| |
|
|||||| ||||||||| |||||||| |||| ||||| |||||| || ||| |||||||| || | ||||| |||||| ||||| ||||| ||||| |
|
|
| T |
9362464 |
ctctccactcatattggggattgtgagaagggccatggattctaa-aaaaaacatggtagtgagggtttctaagtatagatagtagtttccctcaatcct |
9362562 |
T |
|
| Q |
223 |
cttgatccctt |
233 |
Q |
| |
|
|| ||||||| |
|
|
| T |
9362563 |
atttatccctt |
9362573 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 23 - 167
Target Start/End: Complemental strand, 13096514 - 13096373
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||||||||||||||| ||||||||| | ||||| ||||||| ||||||||||| || ||||||||||||||||||| |||||| || ||| |
|
|
| T |
13096514 |
tgtacctgtgggttagtgtcaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagaattattga |
13096418 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaa |
167 |
Q |
| |
|
|||||| |||| |||| ||||||||| |||| ||||| |||||| |
|
|
| T |
13096417 |
ctctccactcatgttgggaattgtgagaagggccatggattctaa |
13096373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 22 - 68
Target Start/End: Original strand, 3246922 - 3246968
Alignment:
| Q |
22 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacct |
68 |
Q |
| |
|
|||||||||||||||||||| || ||||| ||||||||||||||||| |
|
|
| T |
3246922 |
ttgtacctgtgggttagtacaaaaataaaacaaattttccaccacct |
3246968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 176; Significance: 7e-95; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 22 - 276
Target Start/End: Complemental strand, 27045672 - 27045424
Alignment:
| Q |
22 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatg |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
27045672 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg |
27045573 |
T |
|
| Q |
122 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcc |
221 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||| |||||| |||| ||||||||||||| | ||||||| |
|
|
| T |
27045572 |
attctccatgcatattggtaattgtgagtagggtcatgggttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc |
27045479 |
T |
|
| Q |
222 |
tcttgatcccttgattcacactcaccccaaacttcctagaaataagggtgatgat |
276 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| ||| ||||| |||||||| |
|
|
| T |
27045478 |
tcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
27045424 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 56 - 233
Target Start/End: Original strand, 22626469 - 22626647
Alignment:
| Q |
56 |
ttttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatgattctccattcatattggtaattgtgagtagggt |
155 |
Q |
| |
|
||||| |||||| | ||||||||||| ||| ||||||||||||||||||| |||||||| || ||| |||||| ||||||||||||||||||| |||| |
|
|
| T |
22626469 |
ttttctaccaccaccggattagtaatatccgaattaggtagaataatcaagcaattagcattattgactctccactcatattggtaattgtgagaaggg- |
22626567 |
T |
|
| Q |
156 |
catgggttctaag--gaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcctcttgatccctt |
233 |
Q |
| |
|
||||| ||||||| || ||| |||||||| |||| |||||||||||| ||||| ||||| ||||| || ||||||| |
|
|
| T |
22626568 |
catggattctaagaaaaaaaacatggtagtgagggtatctaagtctagatagtagtttccctcaatcctatttatccctt |
22626647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 159
Target Start/End: Original strand, 21785853 - 21785986
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||||||||||||||| |||||||||| | ||||| ||||||| ||||||||||| || |||||||||||| |||||| ||||||| || ||| |
|
|
| T |
21785853 |
tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaaaaatcaagaaattagcattattga |
21785949 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatg |
159 |
Q |
| |
|
|||||| |||| |||||| |||| || |||| |||| |
|
|
| T |
21785950 |
ctctccactcatgttggtacttgttagaagggccatg |
21785986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 168; Significance: 4e-90; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 22 - 253
Target Start/End: Original strand, 23712116 - 23712347
Alignment:
| Q |
22 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatg |
121 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||| |||||| |||||| |
|
|
| T |
23712116 |
ttgtacctgtgggttaggaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaaaaattagttctaata |
23712215 |
T |
|
| Q |
122 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcc |
221 |
Q |
| |
|
|| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| | ||||||| || | ||||||| |
|
|
| T |
23712216 |
atcctccattcatattggtaattgtgagtatggtcatgggttctaaggaaagacaaagtagtgagagtatataagtttggataataattttcatctatcc |
23712315 |
T |
|
| Q |
222 |
tcttgatcccttgattcacactcaccccaaac |
253 |
Q |
| |
|
||||||||||||||||||||||||||| |||| |
|
|
| T |
23712316 |
tcttgatcccttgattcacactcaccctaaac |
23712347 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 216
Target Start/End: Original strand, 20446255 - 20446447
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| ||||| ||||||| ||||||||||| || ||||||||||||||||||| ||||||| || ||| |
|
|
| T |
20446255 |
tgtacctgtgggttagtgccaacataaaccaagttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga |
20446354 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctc |
216 |
Q |
| |
|
|||||| ||||||||||||||||||| |||| ||| ||||||| || ||| |||||||| |||| ||||||||| || ||||| ||||| |
|
|
| T |
20446355 |
ctctccactcatattggtaattgtgagaagggctatgagttctaa-taaaaacatggtagtgagggtatctaagtctaggtagtagtttccctc |
20446447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 21282320 - 21282465
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaa-ttagctctaatg |
121 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| ||||| |||||||| ||||||||||| | | |||| |||||||||||||| ||| ||||| || || |
|
|
| T |
21282320 |
tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatattcgaatttggtagaataatcaagcaatttagcgttattg |
21282419 |
T |
|
| Q |
122 |
attctccattcatattggtaattgtgagtagggtcatgggttctaa |
167 |
Q |
| |
|
| |||||| ||||||||||||||||||| ||||| |||| |||||| |
|
|
| T |
21282420 |
actctccactcatattggtaattgtgagaagggttatggattctaa |
21282465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 18487473 - 18487617
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| ||||| |||||||| |||||| |||| || ||||||||||||||||||| ||||||| || ||| |
|
|
| T |
18487473 |
tgtacctgtgggttagtgccaacataaaccaagttttctaccacctcaggattaataatatctgaattaggtagaataatcaagaaattagcattattga |
18487572 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaa |
167 |
Q |
| |
|
|||||| |||||||||||||||| | |||| ||||| |||||| |
|
|
| T |
18487573 |
ctctccactcatattggtaattgttataagggccatggattctaa |
18487617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 23 - 233
Target Start/End: Original strand, 23602050 - 23602256
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||||||||||||||| |||||||||| | ||||| ||||||| ||||||||||| || ||||||||||||||||||| ||||||| || ||| |
|
|
| T |
23602050 |
tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcggattagtaatatctgaattaggtagaataatcaagaaattagcattattga |
23602146 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcct |
222 |
Q |
| |
|
|| ||| ||||||||| ||||||||| | || ||||| |||||| || ||| |||||||| || | ||||| |||||| ||||| ||||| ||||| |
|
|
| T |
23602147 |
ctcgccactcatattgggaattgtgagaaaggccatggattctaa-aaaaaacatggtagtgagggtttctaagtatagatagtagtttccctcaatcct |
23602245 |
T |
|
| Q |
223 |
cttgatccctt |
233 |
Q |
| |
|
|| ||||||| |
|
|
| T |
23602246 |
atttatccctt |
23602256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 167
Target Start/End: Complemental strand, 24939334 - 24939193
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||||||||||||||| |||||||||| | ||||| ||||||| | ||||||||| || ||||||||||||||||||| ||||||| || ||| |
|
|
| T |
24939334 |
tgtacctgtgggttagtgccaacataaa---agttttctaccaccttcgaattagtaatatctgaattaggtagaataatcaagaaattagcattattga |
24939238 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaa |
167 |
Q |
| |
|
|| ||| ||||||||| ||||||||| |||| ||||| |||||| |
|
|
| T |
24939237 |
ctcgccactcatattgggaattgtgagaagggccatggattctaa |
24939193 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 143
Target Start/End: Complemental strand, 24218633 - 24218516
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||| ||||||||||| ||||||||| | ||||| |||| ||| ||||||||||| || ||||||||||||||||||| ||||||| || ||| |
|
|
| T |
24218633 |
tgtacatgtgggttagtgccaacataat---agttttctaccatctccggattagtaatatctgaattaggtagaataatcaagaaattagcattattga |
24218537 |
T |
|
| Q |
123 |
ttctccattcatattggtaat |
143 |
Q |
| |
|
|||||| ||||||||||||| |
|
|
| T |
24218536 |
ctctccactcatattggtaat |
24218516 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 164; Significance: 1e-87; HSPs: 8)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 22 - 276
Target Start/End: Original strand, 22062920 - 22063168
Alignment:
| Q |
22 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatg |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
22062920 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctccggattagtaatgtccgaattaggtagaataatcaaacaattagctctaatg |
22063019 |
T |
|
| Q |
122 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcc |
221 |
Q |
| |
|
||||||||| ||| ||||||||||||||||| ||||||| || ||||||| |||||||| |||||| |||| ||||||||||||| | ||||||| |
|
|
| T |
22063020 |
attctccatgcatgttggtaattgtgagtagagtcatggtttttaaggaatgacaaagt------agtataaaagtttagataatagttctcatctatcc |
22063113 |
T |
|
| Q |
222 |
tcttgatcccttgattcacactcaccccaaacttcctagaaataagggtgatgat |
276 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||| ||| ||||| |||||||| |
|
|
| T |
22063114 |
tcttgatcccttgattcatactcaccccaaacttcttagcaataaaagtgatgat |
22063168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 22 - 276
Target Start/End: Original strand, 19586983 - 19587222
Alignment:
| Q |
22 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatg |
121 |
Q |
| |
|
|||||||||||||||| |||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||| |
|
|
| T |
19586983 |
ttgtacctgtgggttaataccaacataaatcaaattttccaccacctc---------------cagattaggtagaataatcaaacaattagctctaata |
19587067 |
T |
|
| Q |
122 |
attctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcc |
221 |
Q |
| |
|
||||||| || |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |
|
|
| T |
19587068 |
attctccgtttatattggtaattgtaagtaggtccatgggttctaaggaaggacaaagtagtgagagtatataagtgtagataatagttcctctctatcc |
19587167 |
T |
|
| Q |
222 |
tcttgatcccttgattcacactcaccccaaacttcctagaaataagggtgatgat |
276 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
19587168 |
tcttgatcccttgattcagactcaccccaaacttcctagcaataaaggtgatgat |
19587222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 23 - 276
Target Start/End: Original strand, 23519161 - 23519414
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||||||| ||| |||||||| |||||||||| |||||||||||||||||||||||| ||| | | |
|
|
| T |
23519161 |
tgtacccgtgggttagttccaacataaagcaaattttccaccatctccggattagttatgtccaaataaggtagaataatcaaacaattagccctattta |
23519260 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcct |
222 |
Q |
| |
|
| ||| |||||||||| ||||||| ||||||||||||| ||||||| |||| ||| |||| |||| |||||||||||||||||||||||| ||||| |
|
|
| T |
23519261 |
ctttccgcacatattggtagttgtgagaagggtcatgggttataaggaaagacatggtattgagggtatctaagtctagataatagttcccctcaatcct |
23519360 |
T |
|
| Q |
223 |
cttgatcccttgattcacactcaccccaaacttcctagaaataagggtgatgat |
276 |
Q |
| |
|
|||| ||| | ||| | |||| | ||||||||||| ||| | ||||||||| |
|
|
| T |
23519361 |
attgacccccttgctcatattcactctaaacttcctagcaatgaaggtgatgat |
23519414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 23 - 233
Target Start/End: Original strand, 18188979 - 18189186
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| ||||| |||||||| ||||||||| | ||| ||||||||||||||||||| |||||||| || ||| |
|
|
| T |
18188979 |
tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtattatccgaattaggtagaataatcaagcaattagcattattga |
18189078 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcct |
222 |
Q |
| |
|
|||||| ||||||||||||||||||| |||||||||| ||||| || | | ||||||||| || | |||||||||||| ||||| ||||| ||||| |
|
|
| T |
18189079 |
ctctccactcatattggtaattgtgagaagggtcatggattcta---aaaaaaatagtagtgagggtttctaagtctagatagtagtttccctcaatcct |
18189175 |
T |
|
| Q |
223 |
cttgatccctt |
233 |
Q |
| |
|
|| ||||||| |
|
|
| T |
18189176 |
atttatccctt |
18189186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 149
Target Start/End: Complemental strand, 17818320 - 17818194
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| ||||| ||||||| ||||||||||| || ||||||||||||||||||| ||||||| || ||| |
|
|
| T |
17818320 |
tgtacctgtgggttagtgccaacataaaccaagttttctaccacctacggattagtaatatctgaattaggtagaataatcaagaaattagcattattga |
17818221 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgag |
149 |
Q |
| |
|
|||||| ||||||||||||||||||| |
|
|
| T |
17818220 |
ctctccactcatattggtaattgtgag |
17818194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 165
Target Start/End: Complemental strand, 18852822 - 18852683
Alignment:
| Q |
22 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatg |
121 |
Q |
| |
|
|||||||||||||||||| |||||||||| ||||||| |||| ||| ||||||||||| || ||||||||||||||||| || || || | || | |
|
|
| T |
18852822 |
ttgtacctgtgggttagtgccaacataaa---aattttctaccatctccggattagtaatatctgaattaggtagaataatc-aagaaataacattattt |
18852727 |
T |
|
| Q |
122 |
attctccattcatattggtaattgtgagtagggtcatgggttct |
165 |
Q |
| |
|
| |||||| ||||||||||||||||||| |||| ||||| |||| |
|
|
| T |
18852726 |
actctccactcatattggtaattgtgagaagggccatggattct |
18852683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 22 - 67
Target Start/End: Complemental strand, 29685338 - 29685293
Alignment:
| Q |
22 |
ttgtacctgtgggttagtaccaacataaagcaaattttccaccacc |
67 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
29685338 |
ttgtacctgtgggttagtactaacataaagcaaattttccaccacc |
29685293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 64
Target Start/End: Original strand, 24390285 - 24390326
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccacc |
64 |
Q |
| |
|
||||||||| |||||||||| |||||||||||||||||||| |
|
|
| T |
24390285 |
tgtacctgtttgttagtaccagcataaagcaaattttccacc |
24390326 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 114; Significance: 7e-58; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 23 - 276
Target Start/End: Original strand, 25339516 - 25339769
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||| |||| |||||| ||||||||||| ||||||||||||||||| ||||||| |||||| ||||||||||||||||||||||||||| ||| ||| |
|
|
| T |
25339516 |
tgtacatgtgagttagtgccaacataaagaaaattttccaccacctccagattagttatgtccggattaggtagaataatcaaacaattagccctattga |
25339615 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcct |
222 |
Q |
| |
|
|||| |||||||||||||||||||| ||| |||| |||||||| ||||||| ||| ||||| |||| |||||||| | || ||||||||||||||| |
|
|
| T |
25339616 |
ccttccactcatattggtaattgtgagttgggccatgagttctaagaaaggacatagtggtgagggtatctaagtctaaactattgttcccctctatcct |
25339715 |
T |
|
| Q |
223 |
cttgatcccttgattcacactcaccccaaacttcctagaaataagggtgatgat |
276 |
Q |
| |
|
|||||||||| | ||||||| || ||||||||||||| ||| | ||||||||| |
|
|
| T |
25339716 |
attgatccctttactcacacttactccaaacttcctagcaatgaaggtgatgat |
25339769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 23 - 233
Target Start/End: Complemental strand, 24501134 - 24500924
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| ||||| |||||||| ||||||||||||||| ||||||||||||||||||| |||||||| || ||| |
|
|
| T |
24501134 |
tgtacctgtgggttagtgccaacataaatcaagttttctaccacctccggattagtaatgtccgaattaggtagaataatcaagcaattagcattattga |
24501035 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcct |
222 |
Q |
| |
|
|||||| | ||||||||||||||||| |||| ||||| ||||||| || ||| |||||||| || | |||||||||||| ||||| ||||| ||||| |
|
|
| T |
24501034 |
ctctccactaatattggtaattgtgagaagggccatggattctaagaaaaaacatggtagtgagggtttctaagtctagatagtagtttccctcaatcct |
24500935 |
T |
|
| Q |
223 |
cttgatccctt |
233 |
Q |
| |
|
|||||||||| |
|
|
| T |
24500934 |
attgatccctt |
24500924 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0220 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0220
Description:
Target: scaffold0220; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 41 - 222
Target Start/End: Original strand, 11741 - 11919
Alignment:
| Q |
41 |
ccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatgattctccattcatattggt |
140 |
Q |
| |
|
|||||||||| ||| ||||| |||||||| |||||||||| ||| ||||||||||||||||||| |||||||| || ||| |||||| |||||||||| |
|
|
| T |
11741 |
ccaacataaaccaagttttctaccacctccagattagtaatatccgaattaggtagaataatcaagcaattagcattattgactctccactcatattggt |
11840 |
T |
|
| Q |
141 |
aattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcct |
222 |
Q |
| |
|
||||||||| |||||||||| ||||| || | | ||||||||| || | |||||||||||| ||||| ||||| ||||| |
|
|
| T |
11841 |
aattgtgagaagggtcatggattcta---aaaaaaatagtagtgagggtttctaagtctagatagtagtttccctcaatcct |
11919 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0566 (Bit Score: 67; Significance: 8e-30; HSPs: 1)
Name: scaffold0566
Description:
Target: scaffold0566; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 23 - 233
Target Start/End: Complemental strand, 1411 - 1202
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| ||||| |||||||| |||||||||| || ||||||||||||||||||| ||||||| | ||| |
|
|
| T |
1411 |
tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccagattagtaatatctgaattaggtagaataatcaagaaattagcataattga |
1312 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcct |
222 |
Q |
| |
|
|||||| |||||||||||||||| || ||||||||| |||||| || ||| |||||||| || | |||||||||||| ||||| ||||| ||||| |
|
|
| T |
1311 |
ctctccactcatattggtaattgttagaagggtcatgaattctaa-aaaaaacatggtagtgagggtttctaagtctagatagtagtttccctcaatcct |
1213 |
T |
|
| Q |
223 |
cttgatccctt |
233 |
Q |
| |
|
|| ||||||| |
|
|
| T |
1212 |
atttatccctt |
1202 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0222 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0222
Description:
Target: scaffold0222; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 23 - 167
Target Start/End: Complemental strand, 18632 - 18488
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||||||||||||||| |||||||||| ||| ||||| |||||||| ||||||||||| || ||||||||||||||||||| ||||||| || ||| |
|
|
| T |
18632 |
tgtacctgtgggttagtgccaacataaaccaagttttctaccacctccggattagtaatatctgaattaggtagaataatcaagaaattagcattattga |
18533 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaa |
167 |
Q |
| |
|
|||||| |||||||||||||||| | |||| ||| |||||||| |
|
|
| T |
18532 |
ctctccactcatattggtaattgttataagggccatcggttctaa |
18488 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0026 (Bit Score: 64; Significance: 5e-28; HSPs: 1)
Name: scaffold0026
Description:
Target: scaffold0026; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 56 - 233
Target Start/End: Complemental strand, 17138 - 16964
Alignment:
| Q |
56 |
ttttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatgattctccattcatattggtaattgtgagtagggt |
155 |
Q |
| |
|
||||| |||||||||| ||||||||| ||| ||||||||||||||||||| |||||||| || ||| |||||| ||||||||||||||||||| ||||| |
|
|
| T |
17138 |
ttttctaccacctctgtattagtaatatccgaattaggtagaataatcaagcaattagcattattgactctccactcatattggtaattgtgagaagggt |
17039 |
T |
|
| Q |
156 |
catgggttctaaggaaggacaaagtagtgagagtatataagtctagataatagttcccctctatcctcttgatccctt |
233 |
Q |
| |
|
||||| |||| ||| | | || |||||| || | |||||||||||| ||||| ||||| ||||| || ||||||| |
|
|
| T |
17038 |
catggattct---gaaaaaaatagcagtgagggtttctaagtctagatagtagtttccctcaatcctatttatccctt |
16964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0113 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0113
Description:
Target: scaffold0113; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 38043 - 38184
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||||||||||||||| |||||||||| | ||||| ||||||| | ||||||||| || ||||||||||||||||||| ||||||| || ||| |
|
|
| T |
38043 |
tgtacctgtgggttagtgccaacataaa---agttttctaccaccttagaattagtaatatctgaattaggtagaataatcaagaaattagcattattga |
38139 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaa |
167 |
Q |
| |
|
|| ||| ||||||||| ||||||||| |||| ||||| |||||| |
|
|
| T |
38140 |
ctcgccactcatattggaaattgtgagaagggccatggattctaa |
38184 |
T |
|
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Target: scaffold0012 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0012
Description:
Target: scaffold0012; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 12854 - 12995
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||||||||||||||| ||||||||| || ||||| |||||||| |||||||||| || || |||||||||||||| | ||||||| || ||| |
|
|
| T |
12854 |
tgtacctgtgggttagtgccaacataa---aagttttctaccacctccagattagtaatatctaatttaggtagaataataaggaaattagcattattga |
12950 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaa |
167 |
Q |
| |
|
|||| | |||||||||||| |||||| | || ||||| |||||| |
|
|
| T |
12951 |
ctctctactcatattggtaactgtgagaaaggacatggattctaa |
12995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0012; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 167
Target Start/End: Original strand, 8745 - 8886
Alignment:
| Q |
23 |
tgtacctgtgggttagtaccaacataaagcaaattttccaccacctctggattagtaatgtccaaattaggtagaataatcaaacaattagctctaatga |
122 |
Q |
| |
|
||||| ||||||||||| |||||||||| | ||||| |||||||| |||||||||| || || |||||||||||||| | ||||||| || ||| |
|
|
| T |
8745 |
tgtacatgtgggttagtgccaacataaa---agttttctaccacctccagattagtaatatctaatttaggtagaataataaggaaattagcattattga |
8841 |
T |
|
| Q |
123 |
ttctccattcatattggtaattgtgagtagggtcatgggttctaa |
167 |
Q |
| |
|
|||| | |||||||||||| |||||| | || ||||| |||||| |
|
|
| T |
8842 |
ctctctactcatattggtaactgtgagaaaggacatggattctaa |
8886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1184 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold1184
Description:
Target: scaffold1184; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 64
Target Start/End: Original strand, 537 - 571
Alignment:
| Q |
30 |
gtgggttagtaccaacataaagcaaattttccacc |
64 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |
|
|
| T |
537 |
gtgggttagtaccaacataaagcaaattttccacc |
571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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