View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14040_low_51 (Length: 208)
Name: NF14040_low_51
Description: NF14040
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14040_low_51 |
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Alignment Details
Target: chr8 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 18 - 192
Target Start/End: Complemental strand, 36479998 - 36479824
Alignment:
| Q |
18 |
atgaaactgctatagccattttcacggatttcatctatggcataatcatggattcatgaagtggccagttgtattggtaaggatgttgaatttggattga |
117 |
Q |
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| T |
36479998 |
atgaaactgctatagccattttcacggatttcatctatggcataatcatggattcatgaagtggccagttgtattggtaaggatgttgaatttggattga |
36479899 |
T |
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| Q |
118 |
actgcatccaacaaccgttgagcttgaaattgaagatttatctctttgaggcaccaatcacatcaaatgtttgtt |
192 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36479898 |
actgcatccaacaaccgttgagcttgaaattgaagatttatctctttgaggcaccaatcacatcaaatgtttgtt |
36479824 |
T |
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