View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14042_high_12 (Length: 367)
Name: NF14042_high_12
Description: NF14042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14042_high_12 |
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Alignment Details
Target: chr6 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 11 - 351
Target Start/End: Complemental strand, 981046 - 980704
Alignment:
| Q |
11 |
caaaggagggcgtacgaaatggtttgttctaatgtg-agaatcatattttggttgtatttttgcaaatttagtttcaggttacctaccatactataactt |
109 |
Q |
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| T |
981046 |
caaaggagggcatacgaaatggtt-gttccaatgtgtaaaatcatattttggtagtatttttgcaaatttagtttcaggttacctatcatactctaactt |
980948 |
T |
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| Q |
110 |
tttctttgctttaacataatgtgataggagacagatttgagaagacccatttgtcgagctgaggttatagtgacaacttggttaaggaaagacagaacct |
209 |
Q |
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| T |
980947 |
tttctttgctttaacataatatgataggagacagaattgagaagacccatttgtcgagctgaggttatagtgacaacttggttgaagaaagacggaacct |
980848 |
T |
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| Q |
210 |
attcaactaaatatgcagaaaacatggttgtaagtttgtatag--cttttttacccaattgtaggtacctctgaagtttgatattacatattgtatatat |
307 |
Q |
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| T |
980847 |
attcaactaaatatgcagaaaacatggttgtaagtttgtatagattttttttacccagttgtaggtacctctgaagtttgatattacatattgtatatat |
980748 |
T |
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| Q |
308 |
ttgacttacactttgtaaattaaaaacatattcgttattgtttt |
351 |
Q |
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| T |
980747 |
ttaacttacacattgtaaattaaaaacatattagttgttgtttt |
980704 |
T |
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