View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14042_high_36 (Length: 229)

Name: NF14042_high_36
Description: NF14042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14042_high_36
NF14042_high_36
[»] chr3 (26 HSPs)
chr3 (11-93)||(46941054-46941136)
chr3 (11-93)||(42100689-42100771)
chr3 (11-97)||(42394436-42394522)
chr3 (11-93)||(54237097-54237179)
chr3 (11-93)||(45126945-45127027)
chr3 (11-93)||(40808866-40808948)
chr3 (11-93)||(24688419-24688501)
chr3 (11-93)||(25413682-25413764)
chr3 (11-93)||(47191043-47191124)
chr3 (11-93)||(54246165-54246247)
chr3 (11-93)||(53273701-53273783)
chr3 (11-92)||(27748565-27748646)
chr3 (11-94)||(40480749-40480832)
chr3 (11-93)||(25996269-25996351)
chr3 (11-93)||(36150131-36150213)
chr3 (11-90)||(29558251-29558330)
chr3 (11-92)||(1078229-1078309)
chr3 (11-92)||(53581875-53581956)
chr3 (11-93)||(9434125-9434207)
chr3 (11-93)||(4190282-4190364)
chr3 (11-93)||(10457909-10457991)
chr3 (11-93)||(52627994-52628076)
chr3 (11-93)||(34791830-34791912)
chr3 (11-93)||(51757594-51757676)
chr3 (11-52)||(52629870-52629911)
chr3 (11-79)||(51249323-51249391)
[»] chr1 (25 HSPs)
chr1 (11-93)||(43571103-43571185)
chr1 (11-93)||(5489777-5489859)
chr1 (11-93)||(37814779-37814861)
chr1 (11-93)||(48498979-48499061)
chr1 (11-92)||(4401329-4401411)
chr1 (11-92)||(2497579-2497660)
chr1 (11-92)||(7447828-7447908)
chr1 (18-93)||(24769523-24769598)
chr1 (11-93)||(38335919-38336001)
chr1 (11-93)||(44112678-44112760)
chr1 (11-93)||(48119629-48119711)
chr1 (12-93)||(750323-750404)
chr1 (14-93)||(50448280-50448359)
chr1 (11-93)||(35003295-35003377)
chr1 (11-93)||(45639749-45639831)
chr1 (11-93)||(46168384-46168466)
chr1 (11-93)||(41065154-41065236)
chr1 (11-93)||(23989540-23989623)
chr1 (11-93)||(38113212-38113294)
chr1 (11-93)||(45427762-45427844)
chr1 (11-93)||(45705826-45705908)
chr1 (11-52)||(4888085-4888126)
chr1 (59-93)||(4888056-4888090)
chr1 (37-93)||(14427348-14427404)
chr1 (13-93)||(26585463-26585543)
[»] scaffold0119 (1 HSPs)
scaffold0119 (11-93)||(686-768)
[»] scaffold0038 (1 HSPs)
scaffold0038 (11-97)||(112652-112738)
[»] chr8 (25 HSPs)
chr8 (11-93)||(11582767-11582849)
chr8 (11-93)||(36743500-36743582)
chr8 (11-92)||(42295197-42295278)
chr8 (14-93)||(30660762-30660841)
chr8 (11-93)||(5754904-5754986)
chr8 (11-93)||(29705363-29705445)
chr8 (11-92)||(29800967-29801048)
chr8 (11-92)||(20148762-20148843)
chr8 (11-92)||(26125637-26125718)
chr8 (11-92)||(30912579-30912660)
chr8 (11-94)||(45397316-45397399)
chr8 (11-93)||(42197452-42197534)
chr8 (12-93)||(2165981-2166062)
chr8 (11-92)||(42699259-42699340)
chr8 (11-86)||(31384672-31384747)
chr8 (11-93)||(2546997-2547079)
chr8 (11-93)||(18066735-18066817)
chr8 (11-93)||(35181517-35181599)
chr8 (11-93)||(1375543-1375625)
chr8 (11-93)||(34304789-34304871)
chr8 (11-92)||(33630010-33630091)
chr8 (11-93)||(16603643-16603725)
chr8 (11-92)||(3743773-3743854)
chr8 (61-93)||(28977147-28977179)
chr8 (11-52)||(9241594-9241635)
[»] chr7 (30 HSPs)
chr7 (11-93)||(24001029-24001111)
chr7 (11-93)||(42538448-42538530)
chr7 (11-93)||(35069722-35069804)
chr7 (11-92)||(44326180-44326261)
chr7 (11-93)||(5015396-5015478)
chr7 (11-93)||(5810941-5811023)
chr7 (11-93)||(42972853-42972935)
chr7 (11-93)||(45326021-45326103)
chr7 (11-92)||(10573751-10573832)
chr7 (11-93)||(9216303-9216384)
chr7 (11-93)||(40236920-40237002)
chr7 (11-92)||(43343641-43343722)
chr7 (11-92)||(44416951-44417032)
chr7 (11-92)||(4638216-4638297)
chr7 (11-93)||(5194248-5194330)
chr7 (14-91)||(26898422-26898499)
chr7 (11-78)||(27393277-27393344)
chr7 (14-85)||(32029837-32029908)
chr7 (11-93)||(43317444-43317526)
chr7 (11-93)||(31513288-31513370)
chr7 (27-93)||(39998409-39998475)
chr7 (11-92)||(16180374-16180454)
chr7 (11-93)||(41861675-41861759)
chr7 (11-94)||(31408650-31408733)
chr7 (11-57)||(38160596-38160642)
chr7 (11-93)||(27535248-27535330)
chr7 (11-93)||(24280613-24280695)
chr7 (59-93)||(38160659-38160693)
chr7 (41-93)||(47279744-47279796)
chr7 (11-93)||(33384871-33384954)
[»] chr6 (18 HSPs)
chr6 (11-93)||(9698350-9698432)
chr6 (11-93)||(26670026-26670108)
chr6 (11-93)||(7273352-7273434)
chr6 (11-93)||(13743238-13743320)
chr6 (11-93)||(13748738-13748820)
chr6 (11-93)||(30014344-30014426)
chr6 (11-93)||(3213401-3213483)
chr6 (11-93)||(26466800-26466882)
chr6 (11-92)||(24204004-24204085)
chr6 (11-93)||(7292748-7292830)
chr6 (11-93)||(7367550-7367632)
chr6 (11-93)||(21279930-21280012)
chr6 (11-92)||(30735984-30736065)
chr6 (11-93)||(21293694-21293776)
chr6 (11-93)||(33242404-33242486)
chr6 (11-92)||(27441544-27441625)
chr6 (17-93)||(31109245-31109321)
chr6 (11-93)||(33253914-33253996)
[»] chr5 (14 HSPs)
chr5 (11-93)||(2614666-2614748)
chr5 (11-93)||(22512306-22512388)
chr5 (11-93)||(41334680-41334762)
chr5 (11-93)||(7617134-7617216)
chr5 (11-93)||(18033983-18034065)
chr5 (11-92)||(5256997-5257078)
chr5 (11-93)||(33801470-33801552)
chr5 (19-93)||(33855068-33855142)
chr5 (11-98)||(32473411-32473498)
chr5 (11-93)||(38470580-38470662)
chr5 (12-92)||(25915006-25915085)
chr5 (11-93)||(17208075-17208157)
chr5 (11-86)||(39122450-39122524)
chr5 (11-93)||(30622736-30622817)
[»] chr4 (37 HSPs)
chr4 (11-93)||(33703142-33703224)
chr4 (11-93)||(35017734-35017815)
chr4 (11-93)||(1771283-1771365)
chr4 (11-93)||(27864565-27864647)
chr4 (11-93)||(55966363-55966445)
chr4 (11-93)||(25051694-25051776)
chr4 (11-92)||(43949818-43949900)
chr4 (11-93)||(48463467-48463549)
chr4 (12-93)||(27316731-27316812)
chr4 (11-92)||(27893859-27893940)
chr4 (14-93)||(27550310-27550389)
chr4 (11-93)||(28982839-28982921)
chr4 (11-92)||(39631102-39631184)
chr4 (98-196)||(34005564-34005680)
chr4 (11-92)||(43514703-43514784)
chr4 (11-91)||(23204795-23204875)
chr4 (14-93)||(12496957-12497036)
chr4 (11-93)||(41878407-41878489)
chr4 (12-93)||(28988474-28988555)
chr4 (11-92)||(43735744-43735825)
chr4 (11-93)||(23035981-23036063)
chr4 (11-92)||(31680904-31680985)
chr4 (11-93)||(711961-712043)
chr4 (11-93)||(17619169-17619251)
chr4 (11-93)||(55272393-55272475)
chr4 (11-93)||(45490330-45490412)
chr4 (11-92)||(3756263-3756344)
chr4 (11-93)||(32728358-32728440)
chr4 (11-92)||(35037007-35037088)
chr4 (14-93)||(960890-960969)
chr4 (15-93)||(41847972-41848050)
chr4 (11-93)||(48435596-48435678)
chr4 (14-52)||(51512285-51512323)
chr4 (12-93)||(21687007-21687088)
chr4 (11-56)||(19879992-19880037)
chr4 (11-92)||(38851515-38851596)
chr4 (11-92)||(41327560-41327641)
[»] chr2 (30 HSPs)
chr2 (11-97)||(19047154-19047240)
chr2 (11-93)||(30838633-30838715)
chr2 (12-92)||(43490419-43490499)
chr2 (11-93)||(1750415-1750497)
chr2 (11-93)||(12302270-12302352)
chr2 (11-93)||(16096748-16096830)
chr2 (15-92)||(33229303-33229381)
chr2 (11-93)||(43335780-43335862)
chr2 (11-93)||(12415477-12415559)
chr2 (11-93)||(12427537-12427619)
chr2 (11-93)||(43114558-43114640)
chr2 (11-92)||(11825671-11825752)
chr2 (11-94)||(34817793-34817876)
chr2 (11-93)||(4764743-4764825)
chr2 (11-92)||(41281991-41282072)
chr2 (11-93)||(13780752-13780834)
chr2 (11-93)||(16803969-16804051)
chr2 (11-93)||(16843251-16843333)
chr2 (11-92)||(8896600-8896681)
chr2 (11-93)||(966851-966933)
chr2 (11-92)||(6518486-6518566)
chr2 (14-92)||(7070418-7070496)
chr2 (11-93)||(18491706-18491788)
chr2 (11-93)||(42026768-42026852)
chr2 (11-93)||(42849875-42849945)
chr2 (11-93)||(34895758-34895840)
chr2 (11-92)||(4299437-4299518)
chr2 (11-64)||(4451967-4452020)
chr2 (12-93)||(14285677-14285758)
chr2 (15-56)||(39149313-39149354)
[»] scaffold0385 (1 HSPs)
scaffold0385 (11-93)||(11252-11334)
[»] scaffold0187 (2 HSPs)
scaffold0187 (11-93)||(14205-14287)
scaffold0187 (11-93)||(24533-24615)
[»] scaffold0157 (1 HSPs)
scaffold0157 (14-93)||(23441-23520)
[»] scaffold0003 (1 HSPs)
scaffold0003 (11-92)||(45736-45817)
[»] scaffold0100 (1 HSPs)
scaffold0100 (11-93)||(35473-35555)


Alignment Details
Target: chr3 (Bit Score: 83; Significance: 2e-39; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 46941136 - 46941054
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46941136 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 46941054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 42100771 - 42100689
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  42100771 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttc 42100689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 42394436 - 42394522
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttctaaa 97  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  42394436 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttctaaa 42394522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 54237179 - 54237097
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  54237179 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttc 54237097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 45126945 - 45127027
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||||    
T  45126945 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaagggtgtttatgtaacattttc 45127027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 40808948 - 40808866
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||| |||||||||||||    
T  40808948 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaataaatggtgttgatgtaacattttc 40808866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 24688419 - 24688501
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||   ||||| |||||||||||||||||||||||||||    
T  24688419 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggagtgtagaaataaagggtgttcatgtaacattttc 24688501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 25413764 - 25413682
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||||| | |||||||||||||||||||||||||||||||||    
T  25413764 gtgagatgaacttacaaaaatatccctaatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttc 25413682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 47191043 - 47191124
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||| ||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  47191043 gtgagatgaacttatcaaaatatctctaatacatggg-tgtacaatgaggtgtaggaataaagggtgttcatgtaacattttc 47191124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 54246165 - 54246247
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||    
T  54246165 gtgagatgaacttacaaaaatatctctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttc 54246247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 53273701 - 53273783
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||| | ||||||| ||||||||||    
T  53273701 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtataggaataaatgatgttcatataacattttc 53273783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 27748646 - 27748565
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    ||||||||||||||||||||||||||||||||||  |||||| |||||| |||| ||||||| |||||||||||||||||||    
T  27748646 gtgagatgaacttaccaaaatatccctaatacataaggtgtataatgaggtgtatgaataaaaggtgttcatgtaacatttt 27748565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 40480832 - 40480749
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttct 94  Q
    |||||||||||||||||||||||||||||||||| || ||||||||| |   || |||||||||||||||||||||||||||||    
T  40480832 gtgagatgaacttaccaaaatatccctaatacataggatgtacaatggggcatatgaataaagggtgttcatgtaacattttct 40480749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 25996351 - 25996269
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||||||||| ||| ||||| |||||||||||||| ||||||| || |||||||||||||||||||||||||    
T  25996351 gtgagatgaatttaccaaaatgtccttaatatatggggtgtacaataagatgtatgattaaagggtgttcatgtaacattttc 25996269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 36150213 - 36150131
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||||||||| |||||| ||||||| |||| | |||| ||||||||||| ||||||||||||||||    
T  36150213 gtgagatgaacttaccaaaatatccctgatacatagggtgtataatggggtgtatgaataaagggtattcatgtaacattttc 36150131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 29558251 - 29558330
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatt 90  Q
    |||||||||| ||||||| |||| ||||||| || ||||||||||||||||||| ||||||||||||||||| |||||||    
T  29558251 gtgagatgaatttaccaatatattcctaatatatagggtgtacaatgagatgtatgaataaagggtgttcatataacatt 29558330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 1078309 - 1078229
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    ||||||||||| ||| ||||||||| ||||||||  ||||||||||||| || |||||||||||||||||||||||||||||    
T  1078309 gtgagatgaacctacaaaaatatcc-taatacattaggtgtacaatgaggtgcaggaataaagggtgttcatgtaacatttt 1078229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 53581875 - 53581956
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    |||||||||||||| ||||||||||||||||||| || |||||||||   |||| |||||||| ||||||||||||||||||    
T  53581875 gtgagatgaacttatcaaaatatccctaatacataggatgtacaatggagtgtatgaataaagagtgttcatgtaacatttt 53581956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 9434207 - 9434125
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaat-gagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||||||||| |||||||| ||||||||||||||| ||| |||| || |||||||||||||||||||||||||    
T  9434207 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagag-tgtatgattaaagggtgttcatgtaacattttc 9434125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 4190282 - 4190364
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| ||||||||||||| |||||||||  ||||||||||  | |||| || |||||||||||||||||||||||||    
T  4190282 gtgagatgaatttaccaaaatatctctaatacataaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttc 4190364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 10457909 - 10457991
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||| || |||||||||||||| |||| |||||||||||||||  | |||| || |||| ||||||||||||||||||||    
T  10457909 gtgagataaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacattttc 10457991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 52627994 - 52628076
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||||||||||| | |||| |||| ||||||||||  |||||| || ||||||||||||| |||||||||||    
T  52627994 gtgagatgaatttaccaaaatatacttaatgcatgaggtgtacaataggatgtatgattaaagggtgttcacgtaacattttc 52628076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 34791912 - 34791830
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||  ||||| |||||||| |||| ||| ||||||  | |||| || |||||||||||||||||||||||||    
T  34791912 gtgagatgaaattattaaaatgtccctaatgcatgaggtttacaatatggtgtatgattaaagggtgttcatgtaacattttc 34791830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 51757676 - 51757594
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||| ||||| ||| |||| |||| ||||||||||  | |||| || ||||||||||| |||||| ||||||    
T  51757676 gtgagatgaaattactaaaatgtccataatgcatgaggtgtacaatagggtgtatgattaaagggtgtttatgtaatattttc 51757594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 52629911 - 52629870
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgta 52  Q
    ||||||||||||||| ||||||||| |||||||| |||||||    
T  52629911 gtgagatgaacttacaaaaatatccttaatacatagggtgta 52629870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 11 - 79
Target Start/End: Complemental strand, 51249391 - 51249323
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgtt 79  Q
    |||||||||| |||||||||||||| |||| |||| |||||| |||| | ||   ||||||||||||||    
T  51249391 gtgagatgaatttaccaaaatatccttaatgcatgaggtgtataatgggttgggtgaataaagggtgtt 51249323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 4e-37; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 43571103 - 43571185
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  43571103 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttc 43571185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 5489859 - 5489777
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  5489859 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttc 5489777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 37814861 - 37814779
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||| ||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  37814861 gtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacattttc 37814779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 48498979 - 48499061
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||   ||||| ||||||| |||||||||||||||||||    
T  48498979 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttc 48499061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 4401411 - 4401329
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaat-aaagggtgttcatgtaacatttt 92  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||| |||| ||||||||||| ||||||    
T  4401411 gtgagatgaacttaccaaaatatctctaatacatggggtgtacaatgaagtgtaggaataaaagagtgttcatgtatcatttt 4401329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 2497579 - 2497660
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    ||||||||||||||||||||||||| ||||| |||||||||||||||  ||||| ||||||| |||||| ||||||||||||    
T  2497579 gtgagatgaacttaccaaaatatccttaatatatggggtgtacaatggaatgtatgaataaatggtgtttatgtaacatttt 2497660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 7447908 - 7447828
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    |||||||||||||| |||||||||  ||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||    
T  7447908 gtgagatgaacttatcaaaatatctgtaatacatggg-tgtacaatgggatgtaggaataaaggatgttcatgtaacatttt 7447828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 24769523 - 24769598
Alignment:
Q  18 gaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||||||||||||||||||||||   ||||| |||||| |||||||||| |||||||||    
T  24769523 gaacttaccaaaatatccctaatacatggggtgtacaatggagtgtagaaataaaaggtgttcatgaaacattttc 24769598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 38336001 - 38335919
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||||||||||||| |||| |||||| |||||||| || |||| || |||||||||||||||||||||||||    
T  38336001 gtgagatgaatttaccaaaatatccttaatgcatgggatgtacaataaggtgtatgattaaagggtgttcatgtaacattttc 38335919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 44112760 - 44112678
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||  | |||| || |||||||||||||||||||||||||    
T  44112760 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttc 44112678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 48119711 - 48119629
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||||||||||||| |||| |||||||||||||||  | |||| || |||||||||||||||||||||||||    
T  48119711 gtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttc 48119629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 750323 - 750404
Alignment:
Q  12 tgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||| ||| |||||||||||| ||||||||||||||||||| | ||||||||  ||||||||||| |||||||||||    
T  750323 tgagatgaatttatcaaaatatccctgatacatggggtgtacaatggggtgtaggaaataagggtgttcacgtaacattttc 750404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 50448280 - 50448359
Alignment:
Q  14 agatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||| ||||||||||||||||||  |||||||||||   ||||| ||||||| |||||||||||||||||||    
T  50448280 agatgaacttacaaaaatatccctaatacataaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttc 50448359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 35003377 - 35003295
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||||||||||||| ||||  ||||||||||||||  | |||| || |||||||||||||||||||||||||    
T  35003377 gtgagatgaatttaccaaaatatccttaatgtatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttc 35003295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 45639749 - 45639831
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||||||||||||| ||||  ||||||||||||||  |||||| || ||||| |||||||||||||||||||    
T  45639749 gtgagatgaatttaccaaaatatccttaatgtatggggtgtacaataggatgtatgattaaagagtgttcatgtaacattttc 45639831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 46168466 - 46168384
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||||||||||||| |||| ||| |||||||||||  ||| || || |||||||||||||||||||||||||    
T  46168466 gtgagatgaatttaccaaaatatccttaatgcattgggtgtacaataggatatatgattaaagggtgttcatgtaacattttc 46168384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 41065236 - 41065154
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| ||||||||||  ||||||| ||||||||||||||   | |||| || |||||||||||||||||||||||||    
T  41065236 gtgagatgaaattaccaaaatgcccctaatgcatggggtgtacaacagggtgtatgattaaagggtgttcatgtaacattttc 41065154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 23989540 - 23989623
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaa-tgagatgtaggaat-aaagggtgttcatgtaacattttc 93  Q
    ||||||| || ||||||||||||||||||||||| |||| ||||| |||| |||| |||| ||||||||||||||||||||||||    
T  23989540 gtgagataaatttaccaaaatatccctaatacatagggtatacaattgag-tgtatgaataaaagggtgttcatgtaacattttc 23989623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 38113212 - 38113294
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||||||||| ||  |||| |||||||||||||||  | |||| || |||||||||||||| ||||||||||    
T  38113212 gtgagatgaatttaccaaaatgtcattaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatataacattttc 38113294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 45427762 - 45427844
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||||||||| |||||||| ||||| |||||||||  | |||| || |||| ||| ||||||||||||||||    
T  45427762 gtgagatgaaattaccaaaatgtccctaatgcatggagtgtacaatagggtgtatgattaaaaggtattcatgtaacattttc 45427844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 45705908 - 45705826
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| ||| |||||| ||| |||| ||||| |||||||||   ||||| || |||||||||||||| ||||||||||    
T  45705908 gtgagatgaatttatcaaaatgtccataatgcatggagtgtacaatagaatgtatgattaaagggtgttcatataacattttc 45705826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 4888126 - 4888085
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgta 52  Q
    ||||||| ||||||||||||||||||||||||||||| ||||    
T  4888126 gtgagataaacttaccaaaatatccctaatacatgggatgta 4888085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 93
Target Start/End: Complemental strand, 4888090 - 4888056
Alignment:
Q  59 gatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||| |||||||||||||||||    
T  4888090 gatgtaggaataaagggcgttcatgtaacattttc 4888056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 93
Target Start/End: Complemental strand, 14427404 - 14427348
Alignment:
Q  37 taatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||| |||| ||||||||||  | |||| || |||||||||||||||||||||||||    
T  14427404 taatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttc 14427348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 93
Target Start/End: Complemental strand, 26585543 - 26585463
Alignment:
Q  13 gagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||| |||| ||||||||| |||| |||||||||||||||    |||| || |||||  ||||||| ||||||||||    
T  26585543 gagatgaatttactaaaatatccttaatgcatggggtgtacaatatagtgtatgattaaagaatgttcatctaacattttc 26585463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 768 - 686
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  768 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttc 686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 112738 - 112652
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttctaaa 97  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  112738 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttctaaa 112652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 1e-34; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 11582849 - 11582767
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  11582849 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttc 11582767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 36743500 - 36743582
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  36743500 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttc 36743582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 42295278 - 42295197
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||    
T  42295278 gtgagatgaacttaccaaaatatccctaatacatggagtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 42295197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 30660762 - 30660841
Alignment:
Q  14 agatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||||||||    
T  30660762 agatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtagaaataaagggtgttcatgtaacattttc 30660841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 5754986 - 5754904
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||| ||||||||||||||||||||    
T  5754986 gtgagatgaacttaccaaaatatccctaatatatgggatgtacaatgggatgtaggaataaaaggtgttcatgtaacattttc 5754904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 29705445 - 29705363
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| | ||||| |||||||||||||||||||||||||||    
T  29705445 gtgagatgaacttatcaaaatatccctaatacatggggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttc 29705363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 29800967 - 29801048
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||| ||||||||||||    
T  29800967 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 29801048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 20148843 - 20148762
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| |||||||||||||| ||||||||||||    
T  20148843 gtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttt 20148762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 26125718 - 26125637
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||||||||||||| ||||||||||||    
T  26125718 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtatgaataaagggtgtttatgtaacatttt 26125637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 30912579 - 30912660
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    |||||||||||||||||||||| ||||||||||||  |||||||||| | ||||||||||||||||||||||||||||||||    
T  30912579 gtgagatgaacttaccaaaatacccctaatacatgaagtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 30912660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 94
Target Start/End: Complemental strand, 45397399 - 45397316
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttct 94  Q
    ||||||||||||||| |||||||||||||||||| ||||||| |||| | ||||||||||||||||||||| ||||||||||||    
T  45397399 gtgagatgaacttacaaaaatatccctaatacatagggtgtagaatggggtgtaggaataaagggtgttcacgtaacattttct 45397316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 42197452 - 42197534
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||||||||||||||||||||||| | |||| ||||| | |||||||||||| ||||||||||||||||||||    
T  42197452 gtgagatgaacttaccaaaatatccctaatacatagtgtgtgcaatggggtgtaggaataaatggtgttcatgtaacattttc 42197534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 2165981 - 2166062
Alignment:
Q  12 tgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||| | |||||||||||| ||||||||||||| ||||||    
T  2165981 tgagatgaacttaccaaaatatctctaatacatggggtatacaatggggtgtaggaataaatggtgttcatgtaatattttc 2166062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 42699340 - 42699259
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    ||||||||||||||| ||||||||| ||||||||  ||||||||||| | ||||||||||||||||||||||||||||||||    
T  42699340 gtgagatgaacttacaaaaatatccataatacataaggtgtacaatggggtgtaggaataaagggtgttcatgtaacatttt 42699259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 31384747 - 31384672
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaa 86  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||   ||||| |||||||||||||||||||||    
T  31384747 gtgagatgaacttaccaaaatattcctaatacatggggtgtacaatagaatgtaagaataaagggtgttcatgtaa 31384672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 2547079 - 2546997
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||   ||||| ||||||| |||||||||||||||||||    
T  2547079 gtgagatgaacttactaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttc 2546997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 18066735 - 18066817
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||| ||||||||||||||||||||| ||||||||   ||||| || |||||||||||||||||||||||||    
T  18066735 gtgagatgaaattactaaaatatccctaatacatgggatgtacaatagaatgtatgattaaagggtgttcatgtaacattttc 18066817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 35181599 - 35181517
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||  | |||| || |||||||||||||||||||||||||    
T  35181599 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttc 35181517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 1375625 - 1375543
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||| || |||||||||||||||||||| ||||||||||||||  | |||| ||||||| ||||||||||||| ||||||    
T  1375625 gtgagataaatttaccaaaatatccctaatatatggggtgtacaattgggtgtatgaataaaaggtgttcatgtaaaattttc 1375543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 34304871 - 34304789
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||  | |||| || |||||| ||||||||||||||||||    
T  34304871 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacattttc 34304789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 33630010 - 33630091
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    |||||||||| |||| ||||| |||||||| ||| |||||||||||||| |||| || |||||||||||| |||||||||||    
T  33630010 gtgagatgaaattactaaaatgtccctaatgcatagggtgtacaatgaggtgtatgattaaagggtgttcgtgtaacatttt 33630091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 16603643 - 16603725
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||||||||| ||  |||| ||||||||||| ||| || |||| || |||||||||| ||||||||||||||    
T  16603643 gtgagatgaatttaccaaaatgtctttaatgcatggggtgtataataaggtgtatgattaaagggtgtgcatgtaacattttc 16603725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 3743854 - 3743773
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    |||||||||||||| |||||||| | ||||| |||||||||| |||| || | | |||||||||||||  ||| ||||||||    
T  3743854 gtgagatgaacttatcaaaatatacttaatatatggggtgtataatgggagggatgaataaagggtgtatatggaacatttt 3743773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 93
Target Start/End: Complemental strand, 28977179 - 28977147
Alignment:
Q  61 tgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||||||||||||||||||||||    
T  28977179 tgtaggaataaagggtgttcatgtaacattttc 28977147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 9241635 - 9241594
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgta 52  Q
    ||||||||||||||| ||||||||||||||| || |||||||    
T  9241635 gtgagatgaacttacaaaaatatccctaatatatagggtgta 9241594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 75; Significance: 1e-34; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 24001029 - 24001111
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  24001029 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttc 24001111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 42538448 - 42538530
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  42538448 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttc 42538530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 35069804 - 35069722
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| |||||||||||||||||||    
T  35069804 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagagtgttcatgtaacattttc 35069722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 44326261 - 44326180
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| |||||||||||||| ||||||||||||    
T  44326261 gtgagatgaacttaccaaaatatccctaatatatgaggtgtacaatgggatgtatgaataaagggtgtttatgtaacatttt 44326180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 5015478 - 5015396
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||   ||||| ||||||| |||||||||||||||||||    
T  5015478 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagagtgttcatgtaacattttc 5015396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 5810941 - 5811023
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||| |||||||||||||||| || |||||||||||| | ||||||||||||||||| |||||||||||||||    
T  5810941 gtgagatgaacttatcaaaatatccctaatatatagggtgtacaatggggtgtaggaataaagggtggtcatgtaacattttc 5811023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 42972935 - 42972853
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||   |||||||||||||| |||||| |||||||||||    
T  42972935 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtaggaataaaggatgttcaggtaacattttc 42972853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 45326103 - 45326021
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||| |||||| |||||||| ||||    
T  45326103 gtgagatgaacttaccaaaatatccctaatatatggggtgtacaatgtgatgtatgaataaaaggtgtttatgtaacactttc 45326021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 10573832 - 10573751
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    |||||||||| |||||||||||| ||||||||||||||||||||||  |||||| |||||||||||||| ||||||||||||    
T  10573832 gtgagatgaatttaccaaaatattcctaatacatggggtgtacaataggatgtatgaataaagggtgtttatgtaacatttt 10573751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 9216384 - 9216303
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||||||||||||| ||||| |||||| ||||||||  ||| |||||||||||||||||||||||||||||||    
T  9216384 gtgagatgaacttaccaaaatatctctaatgcatggg-tgtacaataggatataggaataaagggtgttcatgtaacattttc 9216303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 40237002 - 40236920
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||  |||||| || |||||||||||||||||||||||||    
T  40237002 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaataggatgtatgattaaagggtgttcatgtaacattttc 40236920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 43343641 - 43343722
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    |||||||||||||| |||||||||||||||||||||||||||||||  | ||||| |||||| | |||||||||||||||||    
T  43343641 gtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttt 43343722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 44416951 - 44417032
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    |||||||||||||| |||||||||||||||||||||||||||||||  | ||||| |||||| | |||||||||||||||||    
T  44416951 gtgagatgaacttatcaaaatatccctaatacatggggtgtacaatagggtgtagaaataaatgatgttcatgtaacatttt 44417032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 4638216 - 4638297
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaa-tgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||| |||| |||| ||||||| |||||||||||||||||||    
T  4638216 gtgagatgaacttaccaaaatatccataatatatggggtgtacaattgag-tgtatgaataaaaggtgttcatgtaacatttt 4638297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 5194248 - 5194330
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| ||| |||||||||| ||| |||| |||||||||||||| |||| ||||||| ||||||||||||||||||||    
T  5194248 gtgagatgaatttatcaaaatatccttaaaacatagggtgtacaatgaggtgtatgaataaatggtgttcatgtaacattttc 5194330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 14 - 91
Target Start/End: Original strand, 26898422 - 26898499
Alignment:
Q  14 agatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattt 91  Q
    |||||||||||||||||||||||||||||||||  ||||||||  | |||| ||||||| ||||||||||||||||||    
T  26898422 agatgaacttaccaaaatatccctaatacatggaatgtacaattgggtgtatgaataaaaggtgttcatgtaacattt 26898499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 78
Target Start/End: Original strand, 27393277 - 27393344
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgt 78  Q
    ||||||||||||||| |||||||||||||||||| | |||||||||  ||||||||||||||||||||    
T  27393277 gtgagatgaacttacaaaaatatccctaatacatagagtgtacaataggatgtaggaataaagggtgt 27393344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 85
Target Start/End: Original strand, 32029837 - 32029908
Alignment:
Q  14 agatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgta 85  Q
    ||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||  ||||| |||||    
T  32029837 agatgaatttaccaaaatatccctaatacatggggtgtacaatggggtgtaggaataaaaagtgtttatgta 32029908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 43317526 - 43317444
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| ||| ||||||||||||||  ||| || ||||||||||| |||| ||||||| ||||||||||||||||||||    
T  43317526 gtgagatgaatttatcaaaatatccctaaagcataggatgtacaatgaggtgtatgaataaatggtgttcatgtaacattttc 43317444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 31513370 - 31513288
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||||||||||||| |||| |||||||| ||||||  | |||| || ||||| |||||||||||||||||||    
T  31513370 gtgagatgaatttaccaaaatatccttaatgcatggggtatacaatagggtgtatgattaaagagtgttcatgtaacattttc 31513288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 93
Target Start/End: Complemental strand, 39998475 - 39998409
Alignment:
Q  27 aaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||||||||||||  |||||| || ||||  |||||||||||||||||||    
T  39998475 aaaatatccctaatacatggggtgtacaataggatgtatgattaaaatgtgttcatgtaacattttc 39998409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 16180374 - 16180454
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    |||||||||| ||||||||||||   |||||| |||||||||||||| | |||||||||||| |||||| ||||||||||||    
T  16180374 gtgagatgaatttaccaaaatatttataatacgtggggtgtacaatg-ggtgtaggaataaatggtgttgatgtaacatttt 16180454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 41861759 - 41861675
Alignment:
Q  11 gtgagatgaacttaccaaaatatcccta--atacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||| |||||||||||||||| |||  |||||| ||||||| |||  | |||| ||||||||||||||||||||||||||||    
T  41861759 gtgagataaacttaccaaaatatctctataatacatagggtgtataattgggtgtatgaataaagggtgttcatgtaacattttc 41861675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 31408650 - 31408733
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaat-gagatgtaggaataaagggtgttcatgtaacattttct 94  Q
    |||| ||||| |||||||||||||| |||| |||||| |||||||| ||| |||| || ||||||||||||||||||||||||||    
T  31408650 gtgaaatgaatttaccaaaatatccttaatgcatgggatgtacaatagag-tgtatgattaaagggtgttcatgtaacattttct 31408733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 38160596 - 38160642
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatg 57  Q
    |||||||||| |||| |||||||||||||||||||||||||||||||    
T  38160596 gtgagatgaagttactaaaatatccctaatacatggggtgtacaatg 38160642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 27535248 - 27535330
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaga-tgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||||||||| ||  ||| |||||| ||||||||| ||| |||| || |||||||||||||||||||||||||    
T  27535248 gtgagatgaaattaccaaaatgtctttaacacatggagtgtacaat-agagtgtatgattaaagggtgttcatgtaacattttc 27535330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 24280613 - 24280695
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| ||||||||||||  ||| | |||||| |||| |||  | |||| |||||||||||||||| |||||||||||    
T  24280613 gtgagatgaatttaccaaaatatttctagtgcatgggatgtagaatagggtgtatgaataaagggtgttcacgtaacattttc 24280695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 93
Target Start/End: Original strand, 38160659 - 38160693
Alignment:
Q  59 gatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||||||||||||||||||||||||    
T  38160659 gatgtaggaataaagggtgttcatgtaacattttc 38160693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 41 - 93
Target Start/End: Original strand, 47279744 - 47279796
Alignment:
Q  41 acatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||| |||||| ||||||||||| || |||||| ||||||    
T  47279744 acatggggtgtacaatgggatgtatgaataaagggtatttatgtaatattttc 47279796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 33384954 - 33384871
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaat-gagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||||||||| |||||||| ||||| || |||||| | | |||| || |||| | ||||||||||||||||||    
T  33384954 gtgagatgaatttaccaaaatgtccctaatgcatggagtatacaataggggtgtatgattaaatgatgttcatgtaacattttc 33384871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 1e-34; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 9698350 - 9698432
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  9698350 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttc 9698432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 26670026 - 26670108
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  26670026 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaagggtgttcatgtaacattttc 26670108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 7273352 - 7273434
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||    
T  7273352 gtgagatgaacttaccaaaatatctctaatacatggggtgtacaataaggtgtaggaataaagggtgttcatgtaacattttc 7273434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 13743238 - 13743320
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||| ||||||||||||||||||||    
T  13743238 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacattttc 13743320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 13748738 - 13748820
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||| ||||||||||||||||||||    
T  13748738 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaattggatgtatgaataaaaggtgttcatgtaacattttc 13748820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 30014426 - 30014344
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||||| ||||||||||||| |||| |||| |||||||||||||||||||||||||||||||||||    
T  30014426 gtgagatgaacttaccaaaatatgcctaatacatgggatgtataatgggatgtaggaataaagggtgttcatgtaacattttc 30014344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 3213483 - 3213401
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||| ||||| |||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  3213483 gtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatgagatgtatgaataaagggtgtttatgtaacattttc 3213401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 26466882 - 26466800
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||| | ||||||||||||||||||| |||||||||||||    
T  26466882 gtgagatgaacttaccaaaataaccctaatacatggagtgtacaatggggtgtaggaataaagggtgtttatgtaacattttc 26466800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 24204004 - 24204085
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    |||||||||||||||||||||||||||||||||||| |||||||||  | |||||||||||| |||||||||||||||||||    
T  24204004 gtgagatgaacttaccaaaatatccctaatacatggagtgtacaatagggtgtaggaataaatggtgttcatgtaacatttt 24204085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 7292830 - 7292748
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||| |||| ||||||| ||||||| ||||||||||||    
T  7292830 gtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaatggtgttcttgtaacattttc 7292748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 7367632 - 7367550
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| | ||||||| ||||||||||    
T  7367632 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtatgaataaatgatgttcatataacattttc 7367550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 21280012 - 21279930
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||||||||||||||||||||||||| ||| |||||  |||||| |||||||||||||||||||||||||||    
T  21280012 gtgagatgaatttaccaaaatatccctaatacatgggatgtgcaatggaatgtagaaataaagggtgttcatgtaacattttc 21279930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 30736065 - 30735984
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||| | ||||||||||||  ||||||||||||||||||    
T  30736065 gtgagatgaacttaccaaaatatcactaatacatgaggtgtacaatggggtgtaggaataaaaagtgttcatgtaacatttt 30735984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 21293694 - 21293776
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||| ||||| |||||||||||||| |||||||||||||||||| ||| ||||| |||||||||||||| |||||||||||||    
T  21293694 gtgaaatgaatttaccaaaatatccttaatacatggggtgtacagtgaaatgtatgaataaagggtgtttatgtaacattttc 21293776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 33242486 - 33242404
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||||||||| ||| |||||||||||||||||||| || |||| || |||| ||||||||||||||||||||    
T  33242486 gtgagatgaatttaccaaaatgtccttaatacatggggtgtacaataaggtgtatgattaaatggtgttcatgtaacattttc 33242404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 27441625 - 27441544
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    |||||||||| |||||||||||||| |||||||| || ||||||||  | |||| || ||||||||||||||||||||||||    
T  27441625 gtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 27441544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 93
Target Start/End: Original strand, 31109245 - 31109321
Alignment:
Q  17 tgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||| ||| ||||||||||||| | ||||||||||| |||| |||||| || |||||||||||||||||||||||||    
T  31109245 tgaatttatcaaaatatccctagtgcatggggtgtataatgggatgtatgattaaagggtgttcatgtaacattttc 31109321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 33253996 - 33253914
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| ||||||| || |||||||| |||||||||||||||  | |||  || |||| ||||||||||||||||||||    
T  33253996 gtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacattttc 33253914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 1e-34; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 2614666 - 2614748
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||    
T  2614666 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatgggatgtaggaataaagggtgttcatgtaacattttc 2614748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 22512388 - 22512306
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||   |||||||||||||||||||||||||||||||||    
T  22512388 gtgagatgaacttaccaaaatatccctaatacatggagtgtacaatggagtgtaggaataaagggtgttcatgtaacattttc 22512306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 41334680 - 41334762
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||| |||| ||||||||||||||||||||||||||||    
T  41334680 gtgagatgaacttaccaaaatatccctaatacatagggtgtataatgaggtgtatgaataaagggtgttcatgtaacattttc 41334762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 7617216 - 7617134
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||   |||| ||||||||||||||||||||||||||||    
T  7617216 gtgagatgaacttaccaaaatatccctaatacatggggtgtataatggagtgtatgaataaagggtgttcatgtaacattttc 7617134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 18034065 - 18033983
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||    
T  18034065 gtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggagtgtaggaataaagggtgttcatgtaacattttc 18033983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 5257078 - 5256997
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||| ||||||||||||    
T  5257078 gtgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 5256997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 33801552 - 33801470
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||| |||||||||||||||||||| |||||||||| | ||||| |||||||| ||||||||||||||||||    
T  33801552 gtgagatgaacttactaaaatatccctaatacatggagtgtacaatggggtgtagaaataaaggatgttcatgtaacattttc 33801470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 19 - 93
Target Start/End: Original strand, 33855068 - 33855142
Alignment:
Q  19 aacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||| | ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  33855068 aacttaccaaaatgttcctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttc 33855142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 11 - 98
Target Start/End: Original strand, 32473411 - 32473498
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttctaaat 98  Q
    |||||||||| ||||||||||||||||||| |||| |||||||||| || |||| || ||||||||||||||||||||||||| ||||    
T  32473411 gtgagatgaaattaccaaaatatccctaatgcatgtggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttccaaat 32473498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 38470662 - 38470580
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||| ||||| |||||||||||||| |||||||||||||||||||||  ||||| |||||||||||||| |||||||||||||    
T  38470662 gtgaaatgaatttaccaaaatatccttaatacatggggtgtacaatggaatgtatgaataaagggtgtttatgtaacattttc 38470580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 25915006 - 25915085
Alignment:
Q  12 tgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    |||||||||| ||| ||||||| | |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||    
T  25915006 tgagatgaacctacaaaaatattc-taatacattgggtgtacaatgaggtgtaggaataaagggtgttcatgtaacatttt 25915085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 17208157 - 17208075
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||||||||| ||| |||| ||||||||||||||| |  |||| || ||||||||||||| |||||||||||    
T  17208157 gtgagatgaatttaccaaaatgtccttaatgcatggggtgtacaataaagtgtatgattaaagggtgttcacgtaacattttc 17208075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 11 - 86
Target Start/End: Original strand, 39122450 - 39122524
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaa 86  Q
    |||||||||| |||||||||||| |||||||||| ||||||  ||| ||||||| ||||||| |||||||||||||    
T  39122450 gtgagatgaatttaccaaaatattcctaatacat-gggtgtctaattagatgtatgaataaaaggtgttcatgtaa 39122524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 30622736 - 30622817
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||| || |||||||||||||| |||| |||||| | ||||||  | |||| || |||||| ||||||||||||||||||    
T  30622736 gtgagataaatttaccaaaatatccttaatgcatgggct-tacaatagggtgtatgattaaaggatgttcatgtaacattttc 30622817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 75; Significance: 1e-34; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 33703224 - 33703142
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  33703224 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacattttc 33703142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 35017815 - 35017734
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  35017815 gtgagatgaacttaccaaaatatcccta-tacatggggtgtacaatgagatataggaataaagggtgttcatgtaacattttc 35017734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 1771283 - 1771365
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  1771283 gtgagatgaacttatcaaaatatctctaatacatggggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttc 1771365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 27864647 - 27864565
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||| |||||||||||||    
T  27864647 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacattttc 27864565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 55966363 - 55966445
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||| |||||||||||||    
T  55966363 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgggatgtatgaataaagggtgtttatgtaacattttc 55966445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 25051776 - 25051694
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||||| |||||||||| ||||||||    
T  25051776 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagtgtgttcatgtgacattttc 25051694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 43949818 - 43949900
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaat-aaagggtgttcatgtaacatttt 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||||||||||||||| ||||||    
T  43949818 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgcaggaataaaagggtgttcatgtatcatttt 43949900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 48463467 - 48463549
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| ||||| ||||||| |||||| |||||||||||||    
T  48463467 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaaatgtatgaataaatggtgtttatgtaacattttc 48463549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 12 - 93
Target Start/End: Original strand, 27316731 - 27316812
Alignment:
Q  12 tgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||| | ||||||||||    
T  27316731 tgagatgaacttaccaaaatatccttaatacatggggtgtataatgaggtgtaggaataaagggtgttcgtttaacattttc 27316812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 27893859 - 27893940
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| |||||| ||||||| |||||| ||||||||||||    
T  27893859 gtgagatgaaattaccaaaatatccctaatacatggggtgtacaatgggatgtatgaataaatggtgtttatgtaacatttt 27893940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 27550389 - 27550310
Alignment:
Q  14 agatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||||||||||||||||||||| |||||||||||   ||||| |||||||||||||||||||||||||||    
T  27550389 agatgaacttaccaaaatatccctaatacatgaggtgtacaatggagtgtagaaataaagggtgttcatgtaacattttc 27550310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 28982839 - 28982921
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||||||||||||| ||||| ||||||||  | ||||| |||||||||||||||||||||||||||    
T  28982839 gtgagatgaacttaccaaaatatccctaatatatgggatgtacaatagggtgtagaaataaagggtgttcatgtaacattttc 28982921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 39631184 - 39631102
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaat-aaagggtgttcatgtaacatttt 92  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||| |||||| ||||||||| ||||||    
T  39631184 gtgagatgaacttaccaaaatatccctaatacatgaggtgtacaatgaggtgtaggaataaaagggggttcatgtatcatttt 39631102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 98 - 196
Target Start/End: Complemental strand, 34005680 - 34005564
Alignment:
Q  98 ttttaattgctattttgattcaatgagtgtgctatcctttatcaatgat------------------caatttgcatccattgctttagatatataaagc 179  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||                  |||||||||||||||||||||||||||||||||    
T  34005680 ttttaattgctattttgattcaatgagtgtgctatcctttatcaatgattttgtgcctccaattcatcaatttgcatccattgctttagatatataaagc 34005581  T
Q  180 attcgtaaagttatgat 196  Q
    |||||||||||||||||    
T  34005580 attcgtaaagttatgat 34005564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 43514703 - 43514784
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    |||||||||||||||||||||| ||||||||||||  ||||||||||   ||||||||||||||||||||||||||||||||    
T  43514703 gtgagatgaacttaccaaaataaccctaatacatgaagtgtacaatggagtgtaggaataaagggtgttcatgtaacatttt 43514784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 23204795 - 23204875
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattt 91  Q
    |||| |||||||||| |||||||||||||||||| || ||||||||| ||||||||||||||| |||||||||||||||||    
T  23204795 gtgacatgaacttacaaaaatatccctaatacataggatgtacaatgggatgtaggaataaagagtgttcatgtaacattt 23204875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 93
Target Start/End: Complemental strand, 12497036 - 12496957
Alignment:
Q  14 agatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||| |||||||||||| |||||||||   |||||||||||||||||||||| ||||||||||    
T  12497036 agatgaacttaccaaaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacattttc 12496957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 41878489 - 41878407
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||| |||||||||||||||  || |||||||||||||| |||| |||||||| |||||||||||||||||||    
T  41878489 gtgagatgaacttatcaaaatatccctaatggatagggtgtacaatgaggtgtatgaataaagagtgttcatgtaacattttc 41878407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 28988555 - 28988474
Alignment:
Q  12 tgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||| ||| |||||| |||||| | |||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  28988555 tgagatgaatttatcaaaatgtccctagtgcatggggtgtacaatgaggtgtatgaataaagggtgttcatgtaacattttc 28988474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 43735825 - 43735744
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    |||||||||||||| ||||||||| |||||||||||  |||| ||||||||||||||||||||| ||||||||||| |||||    
T  43735825 gtgagatgaacttatcaaaatatctctaatacatggaatgtataatgagatgtaggaataaaggatgttcatgtaatatttt 43735744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 23036063 - 23035981
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||| ||||||||||||||| || |||||||||||  | ||||||||||||||  |||||||||||||||||    
T  23036063 gtgagatgaacttacaaaaatatccctaatatatagggtgtacaatagggtgtaggaataaaggaggttcatgtaacattttc 23035981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 31680985 - 31680904
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||  ||||| ||||||| |||||| | ||||||||||    
T  31680985 gtgagatgaacttaccaaaatatccctaatatacggggtgtacaatggaatgtatgaataaatggtgtttacgtaacatttt 31680904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 712043 - 711961
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||||||||||||| |||| ||| |||||||||||  | |||| || |||||||||||||||||||||||||    
T  712043 gtgagatgaatttaccaaaatatccttaatgcatagggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttc 711961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 17619169 - 17619251
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||||||||||||| |||| |||||||||||||||  | |||| || |||| ||||||||||||||||||||    
T  17619169 gtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaaaggtgttcatgtaacattttc 17619251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 55272393 - 55272475
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaat-gagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||||||||||||| |||| ||||||||||||||| ||| |||| || |||||| ||||||||||||||||||    
T  55272393 gtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagag-tgtatgattaaaggatgttcatgtaacattttc 55272475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 45490330 - 45490412
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||| ||| ||||||||||||||| ||||||||||  ||||||  ||||||  |||||||||||||||||||    
T  45490330 gtgagatgaatttactaaagtatccctaatacatgaggtgtacaattggatgtataaataaaatgtgttcatgtaacattttc 45490412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 3756263 - 3756344
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    ||||||| || |||| ||||||||| |||| |||||||||||||||  | |||| || ||||||||||||||||||||||||    
T  3756263 gtgagataaatttactaaaatatccttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 3756344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 32728440 - 32728358
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||| ||||| ||| |||| |||||||||||||||  | |||| || |||||| ||||||||||||||||||    
T  32728440 gtgagatgaatttactaaaatgtccttaatgcatggggtgtacaatagggtgtatgattaaaggatgttcatgtaacattttc 32728358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 35037088 - 35037007
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaat-gagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    |||||||||| |||||||||||||| |||| ||||||||||||||| ||| |||| |  ||||||||| ||||||||||||||    
T  35037088 gtgagatgaatttaccaaaatatccttaatgcatggggtgtacaatagag-tgtatggttaaagggtgctcatgtaacatttt 35037007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 960890 - 960969
Alignment:
Q  14 agatgaacttaccaaaatatccctaatacatggggtgtacaatgaga-tgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||| |||||||||| ||||||||  || ||||||||||| ||| |||| || |||||||||||||||||||||||||    
T  960890 agatgaatttaccaaaatgtccctaatgtatagggtgtacaat-agagtgtatgattaaagggtgttcatgtaacattttc 960969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 41848050 - 41847972
Alignment:
Q  15 gatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||| || ||||||| || ||||| |||||||||||||||||| |||  ||| ||||| ||||| ||||||||||||    
T  41848050 gatgaatttgccaaaatgtctctaatgcatggggtgtacaatgaggtgtgtgaaaaaaggatgttcttgtaacattttc 41847972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 48435596 - 48435678
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| ||||||| || |||||||| |||||||||||||||  | |||  || |||| ||||||||||||||| ||||    
T  48435596 gtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacactttc 48435678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 51512285 - 51512323
Alignment:
Q  14 agatgaacttaccaaaatatccctaatacatggggtgta 52  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  51512285 agatgaacttaccaaaatatctctaatacatggggtgta 51512323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 21687088 - 21687007
Alignment:
Q  12 tgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||| |||||||  |||||||||  | |||| |||| | ||||  |||||||| ||||||||||||||||||    
T  21687088 tgagatgaacttactaaaatatttctaatacataagatgtataatggggtgtaaaaataaaggatgttcatgtaacattttc 21687007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 19880037 - 19879992
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaat 56  Q
    |||||||||| |||||||||| ||| ||||| ||||||||||||||    
T  19880037 gtgagatgaatttaccaaaatgtccataatatatggggtgtacaat 19879992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 92
Target Start/End: Complemental strand, 38851596 - 38851515
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    |||||||||| ||| |||||| ||| |||| ||||| ||||||| |  |||||| || |||||| | |||||||||||||||    
T  38851596 gtgagatgaatttatcaaaatgtccataatgcatggagtgtacattatgatgtatgattaaaggatattcatgtaacatttt 38851515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 41327560 - 41327641
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    |||||||||| |||||||||| ||| || | |||  ||||||||||| | |||  |||||||||||||  ||||||||||||    
T  41327560 gtgagatgaatttaccaaaatgtccgtagtgcataaggtgtacaatggggtgtgtgaataaagggtgtctatgtaacatttt 41327641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 75; Significance: 1e-34; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 97
Target Start/End: Complemental strand, 19047240 - 19047154
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttctaaa 97  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||  ||||||||||||||||||||||||||||||||||||||    
T  19047240 gtgagatgaacttaccaaaatatccctaatacatagggtgtacaatggaatgtaggaataaagggtgttcatgtaacattttctaaa 19047154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 30838715 - 30838633
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  30838715 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaataagatgtagaaataaagggtgttcatgtaacattttc 30838633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 12 - 92
Target Start/End: Original strand, 43490419 - 43490499
Alignment:
Q  12 tgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    ||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||    
T  43490419 tgagatgaacttaccaaaatatccctaatacatagagtgtacaatgggatgtaggaataaagggtgttcatgtaacatttt 43490499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 1750497 - 1750415
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||||    
T  1750497 gtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtaggaataaagggtgttcatgtaacattttc 1750415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 12302270 - 12302352
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||| | ||||| |||||||||||||||||||||||||||    
T  12302270 gtgagatgaacttacaaaaatatccctaatacatagggtgtacaatggggtgtagaaataaagggtgttcatgtaacattttc 12302352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 16096830 - 16096748
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||| |||| ||||||||||||||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||    
T  16096830 gtgagattaactcaccaaaatatccctaatacatggggtgtataatggggtgtaggaataaagggtgttcatgtaacattttc 16096748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 15 - 92
Target Start/End: Complemental strand, 33229381 - 33229303
Alignment:
Q  15 gatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaat-aaagggtgttcatgtaacatttt 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  33229381 gatgaacttaccaaaatatccctaatacatggggtgtacaatgaggtgtaggaataaaagggtgttcatgtatcatttt 33229303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 43335780 - 43335862
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| | ||||||| ||||||||||    
T  43335780 gtgagatgaacttaccaaaatatccctaatacatgggatgtacaatgaggtgtaggaataaatgatgttcatataacattttc 43335862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 12415477 - 12415559
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||| || |||||||||| |||||||| ||||||||||||||| || |||| || |||||||||||||||||||||||||    
T  12415477 gtgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttc 12415559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 12427537 - 12427619
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||| || |||||||||| |||||||| ||||||||||||||| || |||| || |||||||||||||||||||||||||    
T  12427537 gtgagataaaattaccaaaatgtccctaatgcatggggtgtacaataaggtgtatgattaaagggtgttcatgtaacattttc 12427619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 43114640 - 43114558
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||  | |||| || |||||||||||||||||||||||||    
T  43114640 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttc 43114558  T

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Target: chr2; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 11825671 - 11825752
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    |||||||||| |||||||||| |||||||| |||||||||||||||  | |||| || ||||||||||||||||||||||||    
T  11825671 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 11825752  T

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Target: chr2; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 34817793 - 34817876
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttct 94  Q
    |||||||||| |||||||||| | | || | |||||||||||||||||| |||  |||||||||||||||||||||||||||||    
T  34817793 gtgagatgaatttaccaaaatgtgcgtagtgcatggggtgtacaatgaggtgtgtgaataaagggtgttcatgtaacattttct 34817876  T

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Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 4764743 - 4764825
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| ||||||||||||   ||||||||||||||||||||  | |||||||||||| |||||| |||||||||||||    
T  4764743 gtgagatgaatttaccaaaatatttataatacatggggtgtacaatagggtgtaggaataaatggtgttgatgtaacattttc 4764825  T

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Target: chr2; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 41281991 - 41282072
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    |||||||||| ||| |||||| |||||||| |||||||||||||||  | |||| || ||||||||||||||||||||||||    
T  41281991 gtgagatgaaattatcaaaatgtccctaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 41282072  T

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Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 13780752 - 13780834
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| ||| |||||||||||||||  ||||||||||||||||| |||  |||||||  ||||| |||||||||||||    
T  13780752 gtgagatgaatttatcaaaatatccctaatgtatggggtgtacaatgaggtgtgtgaataaaatgtgttgatgtaacattttc 13780834  T

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Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 16804051 - 16803969
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| ||| |||||| |||||||| |||||| ||||||||  | |||| || |||||||||||||||||||||||||    
T  16804051 gtgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttc 16803969  T

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Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 16843333 - 16843251
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| ||| |||||| |||||||| |||||| ||||||||  | |||| || |||||||||||||||||||||||||    
T  16843333 gtgagatgaaattatcaaaatgtccctaatgcatgggatgtacaatagggtgtatgattaaagggtgttcatgtaacattttc 16843251  T

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Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 8896600 - 8896681
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    |||||||||| |||||||||||| |||| |  || ||||||||||||  ||||  |||||||||||||||||||||||||||    
T  8896600 gtgagatgaatttaccaaaatattcctattgtatagggtgtacaatggaatgtgtgaataaagggtgttcatgtaacatttt 8896681  T

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Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 966851 - 966933
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||||||||  | | |||| |||||||||||||||  | |||| || |||||||||||||||||||||||||    
T  966851 gtgagatgaatttaccaaaacgttcttaatgcatggggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttc 966933  T

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Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 6518486 - 6518566
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaat-gagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    |||||||||| |||||||||| |||||||| ||||||||||||||| ||| |||| || |||| |||||||||||||||||||    
T  6518486 gtgagatgaaattaccaaaatgtccctaatgcatggggtgtacaatagag-tgtatgattaaa-ggtgttcatgtaacatttt 6518566  T

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Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 14 - 92
Target Start/End: Complemental strand, 7070496 - 7070418
Alignment:
Q  14 agatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    ||||||| ||| |||||| |||| |||| |||| |  ||||||| |||||| |||||||||||||||||||||||||||    
T  7070496 agatgaatttatcaaaatgtccccaataaatggaggttacaatgggatgtatgaataaagggtgttcatgtaacatttt 7070418  T

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Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 18491788 - 18491706
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| |||||||||| | | |||| |||| ||||||||||  | |||| || |||||||||||||||||||||||||    
T  18491788 gtgagatgaatttaccaaaatgttcttaatgcatgaggtgtacaatagggtgtatgattaaagggtgttcatgtaacattttc 18491706  T

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Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 42026852 - 42026768
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaa--gggtgttcatgtaacattttc 93  Q
    |||||||||| || |||||||||||||||| |  ||| |||||||||  ||||| |||||||  |||||||||||||||||||||    
T  42026852 gtgagatgaatttgccaaaatatccctaatgcgcgggatgtacaatggaatgtatgaataaattgggtgttcatgtaacattttc 42026768  T

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Target: chr2; HSP #25
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 42849875 - 42849945
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||||||| |||||||||||||||||||||||||||            |||||||||||||||||||||||||||||    
T  42849875 gtgagatgaacttatcaaaatatccctaatacatggggtgta------------ggaataaagggtgttcatgtaacattttc 42849945  T

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Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 34895758 - 34895840
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| ||||||| || |||||||| |||||||||||||||  | |||  || |||| ||||||||||||||| ||||    
T  34895758 gtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatagggtgtgtgattaaatggtgttcatgtaacactttc 34895840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 4299437 - 4299518
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    |||||||||| |||||||||| ||  |||| ||||| |||||||||  | |||| || |||||||||||||| |||||||||    
T  4299437 gtgagatgaatttaccaaaatgtcattaatgcatggagtgtacaatagggtgtatgattaaagggtgttcatataacatttt 4299518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 11 - 64
Target Start/End: Original strand, 4451967 - 4452020
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgta 64  Q
    |||||||||| ||||||||||||||||||| |||  |||||||||| |||||||    
T  4451967 gtgagatgaatttaccaaaatatccctaatgcatatggtgtacaataagatgta 4452020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 12 - 93
Target Start/End: Complemental strand, 14285758 - 14285677
Alignment:
Q  12 tgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||| |||||||||||||  ||||| || |||||||||||  | |||| || |||||||||||  ||||| ||||||    
T  14285758 tgagatgaatttaccaaaatatctttaatatatagggtgtacaatagggtgtatgattaaagggtgtttgtgtaatattttc 14285677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 39149313 - 39149354
Alignment:
Q  15 gatgaacttaccaaaatatccctaatacatggggtgtacaat 56  Q
    |||||||||||||||||||| ||||||||| || ||||||||    
T  39149313 gatgaacttaccaaaatatctctaatacataggatgtacaat 39149354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 11334 - 11252
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||| | |||| |||||||| |||||||||| ||||||||    
T  11334 gtgagatgaacttaccaaaatatccctaatatatggggtgtacaatggggtgtatgaataaagtgtgttcatgtgacattttc 11252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 14205 - 14287
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||| |||||||||||||||||| || ||||||||| | ||||| |||||||||||||||||||||||||||    
T  14205 gtgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacattttc 14287  T

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Target: scaffold0187; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 24533 - 24615
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||| |||||||||||||||||| || ||||||||| | ||||| |||||||||||||||||||||||||||    
T  24533 gtgagatgaacttacaaaaatatccctaatacataggatgtacaatggggtgtagaaataaagggtgttcatgtaacattttc 24615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 14 - 93
Target Start/End: Original strand, 23441 - 23520
Alignment:
Q  14 agatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    ||||||||||||||||||||| |||||||||||| |||||||||   |||||||||||||||||||||| ||||||||||    
T  23441 agatgaacttaccaaaatatctctaatacatgggatgtacaatggagtgtaggaataaagggtgttcatataacattttc 23520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 11 - 92
Target Start/End: Original strand, 45736 - 45817
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacatttt 92  Q
    |||||||||| |||||||||||||| |||||||| || ||||||||  | |||| || ||||||||||||||||||||||||    
T  45736 gtgagatgaatttaccaaaatatccttaatacataggatgtacaatagggtgtatgattaaagggtgttcatgtaacatttt 45817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 35473 - 35555
Alignment:
Q  11 gtgagatgaacttaccaaaatatccctaatacatggggtgtacaatgagatgtaggaataaagggtgttcatgtaacattttc 93  Q
    |||||||||| ||||||| || |||||||| |||||||||||||||  | |||| || |||| |||||| |||||||||||||    
T  35473 gtgagatgaatttaccaatatgtccctaatgcatggggtgtacaatatggtgtatgattaaatggtgtttatgtaacattttc 35555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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