View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF14042_low_20 (Length: 315)
Name: NF14042_low_20
Description: NF14042
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14042_low_20 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 263; Significance: 1e-146; HSPs: 19)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 1 - 303
Target Start/End: Original strand, 26179909 - 26180211
Alignment:
| Q |
1 |
tttgaagataggggtcccagttggggcaaaagaaaacaatttatggattaacattaatgtagagaaagtggtgagaagggaagagatagttaaggctgta |
100 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| |
|
|
| T |
26179909 |
tttgaagataggggtcccagtaggagcaaaagaaaacaatttatggattaacattaatgtagagaaagtggtgagaagagaagatatagttaaggctgta |
26180008 |
T |
|
| Q |
101 |
aagattttgatgggaagtggccaagagagcaaagaaatgaggatgagagcaaagaaacttggtgatgctgccaagaggactatagaggaaggtggagatt |
200 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||| |
|
|
| T |
26180009 |
aagattttgatgggaagtgaccaagagagcaaagaaatgaggatgagagcaaagaaacttggtgatgcttccaagaggactattgaggaaggtggagatt |
26180108 |
T |
|
| Q |
201 |
cttacaacaacttgattcagttgattgatgatctgaaatcattgaagaaatctaaggctcttggtgtgaaagcagattagataagtcaaatgaaggagtg |
300 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26180109 |
cttacaacaacttgattcagttgattgatgagctgaaatcattaaagaaatctaaggcacttggtgtgaaagcagattagataagtcaaatgaaggagtg |
26180208 |
T |
|
| Q |
301 |
atg |
303 |
Q |
| |
|
||| |
|
|
| T |
26180209 |
atg |
26180211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 26278522 - 26278776
Alignment:
| Q |
1 |
tttgaagataggggtcccagttggggcaaaagaaaacaatttatggattaacattaatgtagagaaagtggtgagaagggaagagatagttaaggctgta |
100 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||||| ||||||| |||||||| ||||||| || |||||||||||||||||||||| ||||||||| |
|
|
| T |
26278522 |
tttgaagataggggtcccagttggagcaaaagtaaacaagttatggactaacattagtgtagaggaaatggtgagaagggaagagatagtgaaggctgta |
26278621 |
T |
|
| Q |
101 |
aagattttgatgggaagtggccaagagagcaaagaaatgaggatgagagcaaagaaacttggtgatgctgccaagaggactatagaggaaggtggagatt |
200 |
Q |
| |
|
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | |
|
|
| T |
26278622 |
gagattttgatgggaattagccaagagagcaaagaaatgaggatgagagcaaagaaacttggtgatgctgccaagaggactatagaggaaggtggacact |
26278721 |
T |
|
| Q |
201 |
cttacaacaacttgattcagttgattgatgatctgaaatcattgaagaaatctaa |
255 |
Q |
| |
|
||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
26278722 |
cttacaacaacttgattcaattgattgatgagctgaaatcattgaagaaatctaa |
26278776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 5 - 255
Target Start/End: Original strand, 26298278 - 26298528
Alignment:
| Q |
5 |
aagataggggtcccagttggggcaaaagaaaacaatttatggattaacattaatgtagagaaagtggtgagaagggaagagatagttaaggctgtaaaga |
104 |
Q |
| |
|
||||||||||||||||| || |||||||||||||| |||||| || |||||| |||||||||||||||||||||||||||||||| ||| |||| |||| |
|
|
| T |
26298278 |
aagataggggtcccagtcggagcaaaagaaaacaagttatggcttgacattagtgtagagaaagtggtgagaagggaagagatagagaagactgtgaaga |
26298377 |
T |
|
| Q |
105 |
ttttgatgggaagtggccaagagagcaaagaaatgaggatgagagcaaagaaacttggtgatgctgccaagaggactatagaggaaggtggagattctta |
204 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | || |||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
26298378 |
ttttgatgggaagcggccaagagagcaaagaaatgaggatgagagcaaagaaacttagcgaggctgccaagaggactatagaagaaggtggagattctta |
26298477 |
T |
|
| Q |
205 |
caacaacttgattcagttgattgatgatctgaaatcattgaagaaatctaa |
255 |
Q |
| |
|
||||||||||||||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
26298478 |
caacaacttgattcaattgattgatgagctgaaatcattgaagaaatctaa |
26298528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 67 - 299
Target Start/End: Original strand, 26129462 - 26129694
Alignment:
| Q |
67 |
agtggtgagaagggaagagatagttaaggctgtaaagattttgatgggaagtggccaagagagcaaagaaatgaggatgagagcaaagaaacttggtgat |
166 |
Q |
| |
|
|||||||| |||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||||| |
|
|
| T |
26129462 |
agtggtgaaaagggaagagatagcgaaggctgtagagattttgatgggaagcggccaagagagcaaagaaatgaggatgagagcaaaaaagcttggtgag |
26129561 |
T |
|
| Q |
167 |
gctgccaagaggactatagaggaaggtggagattcttacaacaacttgattcagttgattgatgatctgaaatcattgaagaaatctaaggctcttggtg |
266 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| || ||||||| |
|
|
| T |
26129562 |
gctgccaagaggactattgaggaaggtggagattcttacaacaacttgattcaattgattgatgagctgaaatcattgaagaaatctaaagcacttggtg |
26129661 |
T |
|
| Q |
267 |
tgaaagcagattagataagtcaaatgaaggagt |
299 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
26129662 |
agaaagcagattagataagtcaaatgaaggagt |
26129694 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 281
Target Start/End: Original strand, 26251674 - 26251954
Alignment:
| Q |
1 |
tttgaagataggggtcccagttggggcaaaagaaaacaatttatggattaacattaatgtagagaaagtggtgagaagggaagagatagttaaggctgta |
100 |
Q |
| |
|
||||||||||||||||||||| || ||||||||||| || ||||||||||| |||| || |||| ||||||||||||||||||| || | | |||||| |
|
|
| T |
26251674 |
tttgaagataggggtcccagtaggagcaaaagaaaataagttatggattaatattagtgaagaggaagtggtgagaagggaagaaattgcaatggctgtt |
26251773 |
T |
|
| Q |
101 |
aagattttgatgggaagtggccaagagagcaaagaaatgaggatgagagcaaagaaacttggtgatgctgccaagaggactatagaggaaggtggagatt |
200 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||| ||||||||||||||||||| |
|
|
| T |
26251774 |
aagattttgatgggaagttgccaagagagcaaagaaatgaggatgagagcaaagaaacttggcgatgcagccaaaaggacgatagaggaaggtggagatt |
26251873 |
T |
|
| Q |
201 |
cttacaacaacttgattcagttgattgatgatctgaaatcattgaagaaatctaaggctcttggtgtgaaagcagattaga |
281 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| || ||||||| || |||||||||| |
|
|
| T |
26251874 |
cttacaacaacttgattcagttgattgatgagctgaaatcattgaagaaatataaagcgcttggtgaaaatgcagattaga |
26251954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 1 - 299
Target Start/End: Complemental strand, 19102868 - 19102570
Alignment:
| Q |
1 |
tttgaagataggggtcccagttggggcaaaagaaaacaatttatggattaacattaatgtagagaaagtggtgagaagggaagagatagttaaggctgta |
100 |
Q |
| |
|
|||||||||||||||| ||| || ||||||| |||||| ||||||| || | || || || || |||||||| ||||| ||||||||| |||||||| |
|
|
| T |
19102868 |
tttgaagataggggtcggagtaggagcaaaagtaaacaagttatggaatagccctagtgaagggatagtggtgaaaaggggagagatagtgaaggctgtg |
19102769 |
T |
|
| Q |
101 |
aagattttgatgggaagtggccaagagagcaaagaaatgaggatgagagcaaagaaacttggtgatgctgccaagaggactatagaggaaggtggagatt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||| | | |
|
|
| T |
19102768 |
gagattttgatgggaagtggccaagagagcaaagaaatgaggatgagagcaaagaagcttggtgatgctgcaaagaggactatagaggagggtggacact |
19102669 |
T |
|
| Q |
201 |
cttacaacaacttgattcagttgattgatgatctgaaatcattgaagaaatctaaggctcttggtgtgaaagcagattagataagtcaaatgaaggagt |
299 |
Q |
| |
|
|| ||||||||||||||| |||||||||||| |||||||||||||||||||||||| | ||||||| ||||||||||||||||| |||||||||||||| |
|
|
| T |
19102668 |
ctcacaacaacttgattctgttgattgatgagctgaaatcattgaagaaatctaagtcacttggtgagaaagcagattagataattcaaatgaaggagt |
19102570 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 173; E-Value: 5e-93
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 26156014 - 26156314
Alignment:
| Q |
1 |
tttgaagataggggtcccagttggggcaaaagaaaacaatttatggattaacattaatgtagagaa-----agtggtgagaagggaagagatagttaagg |
95 |
Q |
| |
|
||||||||||| |||||||||||| ||||||||||| || ||||||| || || || |||| ||| |||||||| ||||||||||||| |||| |
|
|
| T |
26156014 |
tttgaagatagcggtcccagttggagcaaaagaaaataagttatggactagcacta--gtagtgaagacgtagtggtgaagagggaagagatagcgaagg |
26156111 |
T |
|
| Q |
96 |
ctgtaaagattttgatgggaagtggccaagagagcaaagaaatgaggatgagagcaaagaaacttggtgatgctgccaagaggactatagaggaaggtgg |
195 |
Q |
| |
|
||||| |||||||||||||||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
26156112 |
ctgtagagattttgatgggaagtgaccaagagagcaaagcaatgagggtgagagcaaagaaacttggtgatgctgccaagaggactatagaagaaggtgg |
26156211 |
T |
|
| Q |
196 |
agattcttacaacaacttgattcagttgattgatgatctgaaatcattgaagaaatctaaggctcttggtgtgaaagcagattagataagtcaaatgaag |
295 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| || ||||| ||||||||||||||||||||| |
|
|
| T |
26156212 |
agattcttacaacaacttgattcagttgattgatgatctgaaatcattgaagaaatctaaaccacttgatgagaaag-tgattagataagtcaaatgaag |
26156310 |
T |
|
| Q |
296 |
gagt |
299 |
Q |
| |
|
|||| |
|
|
| T |
26156311 |
gagt |
26156314 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 5 - 281
Target Start/End: Original strand, 26243230 - 26243506
Alignment:
| Q |
5 |
aagataggggtcccagttggggcaaaagaaaacaatttatggattaacattaatgtagagaaagtggtgagaagggaagagatagttaaggctgtaaaga |
104 |
Q |
| |
|
|||||||||||||||| || ||||||| |||||| || ||||| ||||||| ||||| || ||||||||||||||||||| |||||||| ||| |
|
|
| T |
26243230 |
aagataggggtcccagcaggagcaaaagtaaacaagttctggatgaacattacagtagatgaaatggtgagaagggaagagattacaaaggctgttgaga |
26243329 |
T |
|
| Q |
105 |
ttttgatgggaagtggccaagagagcaaagaaatgaggatgagagcaaagaaacttggtgatgctgccaagaggactatagaggaaggtggagattctta |
204 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
26243330 |
ttttgatgggaagtggccaagagagcaaagaaatgaggatgagagcaaagaaacttggtgatgctgccaaaaggactatagaggagggtggagattctta |
26243429 |
T |
|
| Q |
205 |
caacaacttgattcagttgattgatgatctgaaatcattgaagaaatctaaggctcttggtgtgaaagcagattaga |
281 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||| |||||||||||||| | |||| || |||||||||||||| |
|
|
| T |
26243430 |
caacaacttgattcagttgattgatgagctgaaatcgttgaagaaatctaaaacgcttgatgagaaagcagattaga |
26243506 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 80 - 299
Target Start/End: Original strand, 26121220 - 26121439
Alignment:
| Q |
80 |
gaagagatagttaaggctgtaaagattttgatgggaagtggccaagagagcaaagaaatgaggatgagagcaaagaaacttggtgatgctgccaagagga |
179 |
Q |
| |
|
|||||||||| ||||| ||| ||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
26121220 |
gaagagatagcgaaggccgtagagattttaatgggaagtggccaagagagcaaagaaatgatgatgagagcaaagaaacttggtgaggctgccaagagga |
26121319 |
T |
|
| Q |
180 |
ctatagaggaaggtggagattcttacaacaacttgattcagttgattgatgatctgaaatcattgaagaaatctaaggctcttggtgtgaaagcagatta |
279 |
Q |
| |
|
|||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||| |||||||||||| |
|
|
| T |
26121320 |
ttatagaggaacgtggacattcttacaacaacttgattcagttgattgatgagctgaaatcattgaagaaatctaaagcacttggtgagaaagcagatta |
26121419 |
T |
|
| Q |
280 |
gataagtcaaatgaaggagt |
299 |
Q |
| |
|
|||||||||||||||||||| |
|
|
| T |
26121420 |
gataagtcaaatgaaggagt |
26121439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 1 - 299
Target Start/End: Original strand, 26192091 - 26192389
Alignment:
| Q |
1 |
tttgaagataggggtcccagttggggcaaaagaaaacaatttatggattaacattaatgtagagaaagtggtgagaagggaagagatagttaaggctgta |
100 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||||||| | |||| || ||| ||||||| |||| |||||||||||||| | |||||||| |
|
|
| T |
26192091 |
tttgaagataggggtccgagttggagcaaaagaaaacaagtcatgggatagtatttgtgtagaggcgatggttagaagggaagagattgcaaaggctgtt |
26192190 |
T |
|
| Q |
101 |
aagattttgatgggaagtggccaagagagcaaagaaatgaggatgagagcaaagaaacttggtgatgctgccaagaggactatagaggaaggtggagatt |
200 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
26192191 |
gagattttgatgggaagtggacaagagagcaaagaaatgaggatgagagcaaagaaacttggtgatgcttccaagaggactatagaggaaggtggacatt |
26192290 |
T |
|
| Q |
201 |
cttacaacaacttgattcagttgattgatgatctgaaatcattgaagaaatctaaggctcttggtgtgaaagcagattagataagtcaaatgaaggagt |
299 |
Q |
| |
|
| |||||||||||||||||||| |||||||| ||||||||| ||||||||||||| || ||||||| |||||| |||| || | |||||||||||| |
|
|
| T |
26192291 |
catacaacaacttgattcagttcattgatgagctgaaatcactgaagaaatctaaagcacttggtgactcagcagactagagaattgaaatgaaggagt |
26192389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 138; E-Value: 4e-72
Query Start/End: Original strand, 67 - 248
Target Start/End: Original strand, 26204777 - 26204958
Alignment:
| Q |
67 |
agtggtgagaagggaagagatagttaaggctgtaaagattttgatgggaagtggccaagagagcaaagaaatgaggatgagagcaaagaaacttggtgat |
166 |
Q |
| |
|
||||||||||||||| |||||||| |||||||| |||| |||||||||| |||||||| |||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
26204777 |
agtggtgagaagggaggagatagtgaaggctgttgagatattgatgggaaatggccaagtgagcaaagaaatgaggatgagagcaaagaagcttggtgat |
26204876 |
T |
|
| Q |
167 |
gctgccaagaggactatagaggaaggtggagattcttacaacaacttgattcagttgattgatgatctgaaatcattgaaga |
248 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||| |
|
|
| T |
26204877 |
gctgccaagaagactatagaggaaggtggagattcttacaacaacttgattcagttgattgatgagctaaaatcattgaaga |
26204958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 67 - 248
Target Start/End: Original strand, 26224414 - 26224595
Alignment:
| Q |
67 |
agtggtgagaagggaagagatagttaaggctgtaaagattttgatgggaagtggccaagagagcaaagaaatgaggatgagagcaaagaaacttggtgat |
166 |
Q |
| |
|
||||||||||||||| |||||||| |||||||| |||| |||||||||||||| |||||| | |||| |||||||||||||||||||| ||||||||| |
|
|
| T |
26224414 |
agtggtgagaagggaggagatagtgaaggctgttgagatattgatgggaagtggtcaagagggaaaagtgatgaggatgagagcaaagaagcttggtgat |
26224513 |
T |
|
| Q |
167 |
gctgccaagaggactatagaggaaggtggagattcttacaacaacttgattcagttgattgatgatctgaaatcattgaaga |
248 |
Q |
| |
|
||||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||| || ||||||||||||| |
|
|
| T |
26224514 |
gctgcaaagaagactatagaggaaggtggagattcttacaacaacttgattcaattgattgatgagctaaaatcattgaaga |
26224595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 26187074 - 26187209
Alignment:
| Q |
1 |
tttgaagataggggtcccagttggggcaaaagaaaacaatttatggattaacattaatgtagagaaagtggtgagaagggaagagatagttaaggctgta |
100 |
Q |
| |
|
||||||||||||||||| ||| || |||||||||||||| || | ||||||||||| |||||| || ||||||||||||||||||||||||||||||| |
|
|
| T |
26187074 |
tttgaagataggggtccaagtaggagcaaaagaaaacaagttctagattaacattagtgtagatgaaatggtgagaagggaagagatagttaaggctgtg |
26187173 |
T |
|
| Q |
101 |
aagattttgatgggaagtggccaagagagcaaagaa |
136 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||| |
|
|
| T |
26187174 |
aagattttgatgggaagtggccaagagagaaaagaa |
26187209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 71 - 189
Target Start/End: Original strand, 26302705 - 26302823
Alignment:
| Q |
71 |
gtgagaagggaagagatagttaaggctgtaaagattttgatgggaagtggccaagagagcaaagaaatgaggatgagagcaaagaaacttggtgatgctg |
170 |
Q |
| |
|
||||||||||||||||| | ||||| || ||||||||||||||| |||||||||||||||||||||||||| || ||| || || ||||||| |||| |
|
|
| T |
26302705 |
gtgagaagggaagagattgcaaaggccgttgagattttgatgggaaatggccaagagagcaaagaaatgaggaagaaagctaaaaatcttggtgctgctt |
26302804 |
T |
|
| Q |
171 |
ccaagaggactatagagga |
189 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
26302805 |
ccaagaggactatagagga |
26302823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 74 - 248
Target Start/End: Original strand, 26208316 - 26208490
Alignment:
| Q |
74 |
agaagggaagagatagttaaggctgtaaagattttgatgggaagtggccaagagagcaaagaaatgaggatgagagcaaagaaacttggtgatgctgcca |
173 |
Q |
| |
|
|||||||||||||| | |||||||| |||||||||||||||||| ||||||||| || |||||||| ||| | ||| ||||||||| ||||||| | |
|
|
| T |
26208316 |
agaagggaagagattgcaaaggctgttgagattttgatgggaagtgaagaagagagcatagcaatgaggaggagggtaaaaaaacttggttatgctgcaa |
26208415 |
T |
|
| Q |
174 |
agaggactatagaggaaggtggagattcttacaacaacttgattcagttgattgatgatctgaaatcattgaaga |
248 |
Q |
| |
|
||| || |||||| || |||| ||||||||||||||||| || || || ||||| || ||||||||||||| |
|
|
| T |
26208416 |
agaagagtatagatgagaatggaacctcttacaacaacttgatgcaattaatagatgacctaaaatcattgaaga |
26208490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 248
Target Start/End: Original strand, 26227872 - 26228044
Alignment:
| Q |
75 |
gaagggaagagatagttaaggctgtaaagattttgatgggaagtggccaagagagcaaagaaatgaggatgagagcaaagaaacttggtgatgctgccaa |
174 |
Q |
| |
|
||||||||||||| | |||||||| |||||||||||||||||| ||||||||| || |||||||| || | ||| ||| ||||| ||||||| || |
|
|
| T |
26227872 |
gaagggaagagattgcaaaggctgttgagattttgatgggaagtgaagaagagagcatagcaatgaggagcagggtaaa-aaaattggttatgctgcaaa |
26227970 |
T |
|
| Q |
175 |
gaggactatagaggaaggtggagattcttacaacaacttgattcagttgattgatgatctgaaatcattgaaga |
248 |
Q |
| |
|
|| || |||||| || |||| ||||||||||||||||| || || || ||||| || ||||||||||||| |
|
|
| T |
26227971 |
gaagagtatagatgagaatggaatctcttacaacaacttgatgcaattaatagatgacctaaaatcattgaaga |
26228044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 248
Target Start/End: Original strand, 26260830 - 26260945
Alignment:
| Q |
133 |
agaaatgaggatgagagcaaagaaacttggtgatgctgccaagaggactatagaggaaggtggagattcttacaacaacttgattcagttgattgatgat |
232 |
Q |
| |
|
||||||||||| |||||||| |||||| ||||||| || |||| || |||||||| |||||| ||||||||||| ||||| || || || ||||| |
|
|
| T |
26260830 |
agaaatgaggaggagagcaagaaaactttgtgatgcagctaagaagagcatagaggagggtggaacctcttacaacaatttgatgcaatttatagatgag |
26260929 |
T |
|
| Q |
233 |
ctgaaatcattgaaga |
248 |
Q |
| |
|
|| ||||||||||||| |
|
|
| T |
26260930 |
cttaaatcattgaaga |
26260945 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 26088608 - 26088644
Alignment:
| Q |
1 |
tttgaagataggggtcccagttggggcaaaagaaaac |
37 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
26088608 |
tttgaagataggggtcccagttggagcaaaagtaaac |
26088644 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 26112396 - 26112432
Alignment:
| Q |
1 |
tttgaagataggggtcccagttggggcaaaagaaaac |
37 |
Q |
| |
|
|||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
26112396 |
tttgaagataggggtcccagttggagcaaaagtaaac |
26112432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 151; Significance: 7e-80; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 44904079 - 44904373
Alignment:
| Q |
1 |
tttgaagataggggtcccagttggggcaaaagaaaacaatttatggattaacattaatgtagagaaagtggtgagaagggaagagatagttaaggctgta |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||| ||||||| || | ||| ||||||| | |||| |||||||||||||| | ||||||| |
|
|
| T |
44904079 |
tttgaagataggggtcccagttggagcaaaagaaaacaagttatggaatagctttactgtagaggcaatggttagaagggaagagattgcaaaggctgcg |
44904178 |
T |
|
| Q |
101 |
aagattttgatgggaagtggccaagagagcaaagaaatgaggatgagagcaaagaaacttggtgatgctgccaagaggactatagaggaaggtggagatt |
200 |
Q |
| |
|
|||||||| |||||| ||| ||||| |||||||||||||||| ||||||||| || |||| ||||||||||||||||||||||||||||||||| | | |
|
|
| T |
44904179 |
gagattttgttgggaaatggtcaagacagcaaagaaatgaggacgagagcaaaaaagtttggcgatgctgccaagaggactatagaggaaggtggacact |
44904278 |
T |
|
| Q |
201 |
cttacaacaacttgattcagttgattgatgatctgaaatcattgaagaaatctaaggctcttggtgtgaaagcagattagataagtcaaatgaag |
295 |
Q |
| |
|
|||||||||||||| |||||||||| ||||| |||||||||||||||||||| || || ||||||| ||||||||||||||||| | |||||||| |
|
|
| T |
44904279 |
cttacaacaacttggttcagttgatagatgagctgaaatcattgaagaaatccaaagcacttggtgagaaagcagattagataactgaaatgaag |
44904373 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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