View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14044_high_6 (Length: 275)
Name: NF14044_high_6
Description: NF14044
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14044_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 260
Target Start/End: Original strand, 41721504 - 41721762
Alignment:
| Q |
1 |
atttatctttagctatgtcatcttataaaaataccattcaaatcatttaaagcgagagaagtacattgtaaaatacatattgtccattgaatcccnnnnn |
100 |
Q |
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| T |
41721504 |
atttatctttagctatgtcatcttataaaaataccattcaaatcatttaaagcgagagaagtacattgtaaaataaatattgtccattgaatcccaaaaa |
41721603 |
T |
|
| Q |
101 |
nnttccatcgtcaagtctaaaattacaacatggtatcgtatatgttcaagtgagattcaaacgaagctttaattacctctaaagttggtcagtagaggat |
200 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
41721604 |
aattccatcgtcaagtctaaaactacaacatggtatcgtatatgttcaagtgagattcaaacgaagctttaattacctctaaagtt-gtcagtagaggat |
41721702 |
T |
|
| Q |
201 |
gaaatgcacaactcaattggacaatctttcacaaaattaattagtatgttttcatcatat |
260 |
Q |
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|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
41721703 |
gaaatgcacaactcaattggaccatctttcacaaaattaattagtatgttttcatcatat |
41721762 |
T |
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