View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14045_low_12 (Length: 256)
Name: NF14045_low_12
Description: NF14045
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14045_low_12 |
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Alignment Details
Target: chr2 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 16 - 246
Target Start/End: Original strand, 44819057 - 44819287
Alignment:
| Q |
16 |
caacaaagtagtttaattatgaaacaaaatagnnnnnnngggattgagattttacttgagatgaataagtgctagagttctgagctcgaacaacaacact |
115 |
Q |
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| T |
44819057 |
caacaaagtagtttaattatgaaacaaaatagaaaaaaagggattgagattttacttgagatgaataagtgctagagttctgagctcgaacaacaacact |
44819156 |
T |
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| Q |
116 |
agaccatttcctccttgtagggaagataattgatgatattaaggtcgtgtttggtgaagtaacattaaccctccgccggaaacgcgataagttgcaatag |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44819157 |
agaccatttcctccttgtagggaagataattgatgatattaaggtcgtgtttggtgaagtaacattaaccctccgccggaaacgcgataagttgcaatag |
44819256 |
T |
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| Q |
216 |
ccgtaagtgcttccaagtccaactatctctg |
246 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
44819257 |
ccgtaagtgcttccaagtccaactatctctg |
44819287 |
T |
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