View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14046_low_16 (Length: 297)
Name: NF14046_low_16
Description: NF14046
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14046_low_16 |
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Alignment Details
Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 9 - 279
Target Start/End: Complemental strand, 48668029 - 48667759
Alignment:
| Q |
9 |
agcagagaggctcattaaattattgcaccatatattgnnnnnnnaaactttatgacaatattatagttctgttgactgttgtatttgcacacaaattcat |
108 |
Q |
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| T |
48668029 |
agcagagaggctcattaaattattgcaccatatattgttttttaaaactttatgacaatattatagttctgttgactgttgtatttgcacacaaattcat |
48667930 |
T |
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| Q |
109 |
ttgatactgaatgtgttattggataattaaataattttcagttctaaacaagttagtatcagcagattcattaactcattcttcaaaatatttaatttta |
208 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48667929 |
ttgatactaaatgtgttattggataattaaataattttcagttctaaacaagttagtatcagcagattcattaactcattcttcaaaatatttaatttta |
48667830 |
T |
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| Q |
209 |
ttgttttggtgttttatcatcaccaaagaatgtgaaggaggagccgaacagaaatttcttcggaatgagat |
279 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48667829 |
ttgttttggtgttttatcatcaccaaagaatgtgaaggaggagccgaacagaaatttcttcggaatgagat |
48667759 |
T |
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