View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14046_low_27 (Length: 238)
Name: NF14046_low_27
Description: NF14046
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14046_low_27 |
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| [»] chr5 (1 HSPs) |
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Alignment Details
Target: chr5 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 7 - 238
Target Start/End: Complemental strand, 1913666 - 1913435
Alignment:
| Q |
7 |
tcctgttcttagatcaaatgtgctatcagttgttgggcaaactatacagccatcctgcatagagaaaacaaaacaattggaaaagatcaactcattttca |
106 |
Q |
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| T |
1913666 |
tcctgttcttagatcaaatgtgctatcagttgttgggcaaactatacagccgtcctgcatagagaaaacaaaacaattggaaaagatcaactcattttca |
1913567 |
T |
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| Q |
107 |
gtcaagctagactaattaataactttgcaagggtggatttcacagaacacataaaaattctactaatcaaaagttcgactgcacgaatgatagaaattga |
206 |
Q |
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| T |
1913566 |
gtcaagctagactaattaataactttgcaagggtggatttcacagaacacataaaaattctactaatcaaaagttcgactgcacgaatgatagaaattga |
1913467 |
T |
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| Q |
207 |
ttgctatttcccaattgacattatcatgcatt |
238 |
Q |
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| T |
1913466 |
ttgctatttcccaattgacattatcatgcatt |
1913435 |
T |
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