View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14048_low_7 (Length: 271)
Name: NF14048_low_7
Description: NF14048
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14048_low_7 |
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Alignment Details
Target: chr2 (Bit Score: 248; Significance: 1e-138; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 248; E-Value: 1e-138
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 40521220 - 40520969
Alignment:
| Q |
1 |
ttattagtgagtaactttttattatttgattaacaaggtttatatgttagttggggttgaatttttgccattgaatgaattatcagcctttgaatggtag |
100 |
Q |
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| T |
40521220 |
ttattagtgagtaactttttattgtttgattaacaaggtttatatgttagttggggttgaatttttgccattgaatgaattatcagcctttgaatggtag |
40521121 |
T |
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| Q |
101 |
atgaaaggtttgacttgttgaaagcaagttattcaacatttacatatttattgaatggtagaactgaagaagcagccgttgtaacttgtaagtaggtaat |
200 |
Q |
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| T |
40521120 |
atgaaaggtttgacttgttgaaagcaagttattcaacatttacatatttattgaatggtagaactgaagaagcagccgttgtaacttgtaagtaggtaat |
40521021 |
T |
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| Q |
201 |
ggatccaccacctcctcctcctttgagcacaccgttgctaggtccagctccc |
252 |
Q |
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| T |
40521020 |
ggatccaccacctcctcctcctttgagcacaccgttgctaggtccagctccc |
40520969 |
T |
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