View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1404_high_95 (Length: 308)
Name: NF1404_high_95
Description: NF1404
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1404_high_95 |
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Alignment Details
Target: chr7 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 30 - 303
Target Start/End: Original strand, 28810501 - 28810774
Alignment:
| Q |
30 |
cataaaaagattgaattatacttcatattataaatccgacgacaaattcaaattattcatattgaagaagtttcataagtcaagactaagtagaaaatat |
129 |
Q |
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| T |
28810501 |
cataaaaagattgaattatacttcatattataaatccgacgacagattcatattattcatattgaagaagtttcataagtcaagactatgtagaaaatat |
28810600 |
T |
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| Q |
130 |
ttaaaattaaatgcatgaaattaaaatcaatagctgttccttacctttactgatggtgtaagcaacttatatgccagcacaattgaagtaacaggttttt |
229 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28810601 |
ttaaaattaaatgcatgaaattaaaatcaatagctgttccttacctttactgatggtgtaagcaacttatatgccagcacaattgaagtaacaggttttt |
28810700 |
T |
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| Q |
230 |
gagcttcaattttatcattaacttcttcgtcgtcatctttttcttctccgtctttctcctgctcctttgcttct |
303 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28810701 |
gagcttcaattttatcattaacttcttcgtcgtcatctttttcttctccgtctttctcctgctcctttgcttct |
28810774 |
T |
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