View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1404_high_98 (Length: 303)
Name: NF1404_high_98
Description: NF1404
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1404_high_98 |
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Alignment Details
Target: chr6 (Bit Score: 157; Significance: 2e-83; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 81 - 241
Target Start/End: Complemental strand, 12234166 - 12234006
Alignment:
| Q |
81 |
caacagatgagtaatcctcaaccccagcagacacaacctggcatgccgccttctcgttctgatcaacccttcaacggtcgtggccgctctaacttcatgg |
180 |
Q |
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| T |
12234166 |
caacagatgagtaatcctcaaccccagcagacacaacctggcatgccgccttctcgttctgatcaacccttcaacggtcgtggccgctctaacttcatgg |
12234067 |
T |
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| Q |
181 |
acttcaattaccaaaagtagctcgtatacaacatcaaagtaaatgatttggttacagaata |
241 |
Q |
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| T |
12234066 |
acttcaattaccaaaagtagctcgtatacaacatcaatgtaaatgatttggttacagaata |
12234006 |
T |
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