View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1404_low_148 (Length: 251)
Name: NF1404_low_148
Description: NF1404
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1404_low_148 |
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Alignment Details
Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 30 - 227
Target Start/End: Original strand, 37979297 - 37979494
Alignment:
| Q |
30 |
ctagcatctaaaataaacaacactgattaattgctttaaacttataatataccttttcatcaacacatctaaaatgaacagaggtgcagaacttgtggtt |
129 |
Q |
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| T |
37979297 |
ctagcatctaaaataaacaacactgattaattgctttaaacttataatataccttttcatcaacacatctaaaatgaacagaggtgcagaacttgtggtt |
37979396 |
T |
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| Q |
130 |
ctcaactctggcaccaggagttgattttgttttctcaactagttgttcgtacacctgaaaattaacaaagttaaaataaattaattttgcttattatt |
227 |
Q |
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| T |
37979397 |
ctcaactctggcaccaggagttgattttgttttctcaactagttgttcgtacacctgaaaattaacaaagttaaaataaattaattttgcttattatt |
37979494 |
T |
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