View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1404_low_165 (Length: 221)
Name: NF1404_low_165
Description: NF1404
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1404_low_165 |
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Alignment Details
Target: chr7 (Bit Score: 145; Significance: 2e-76; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 45220924 - 45220776
Alignment:
| Q |
1 |
acgttttttatttgctgaggaaatgagttgtttattagtaaaataaaattctgtgcgtacgcaataacatagaatatcaacatcaatgtaccataccctc |
100 |
Q |
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| T |
45220924 |
acgttttttatttgctgaggaaatgagttgtttattagtaaaataaaattctgtgcgtacgcaataacatagaatatcaacatcaatgtaccataccctc |
45220825 |
T |
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| Q |
101 |
cattaacatagccctttttcttgtcacgcaaagaattcgtcacattcat |
149 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
45220824 |
cattaacatagccctttttcttgtcacgcaaagaattcatcacattcat |
45220776 |
T |
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