View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14054_low_3 (Length: 560)

Name: NF14054_low_3
Description: NF14054
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14054_low_3
NF14054_low_3
[»] chr8 (51 HSPs)
chr8 (16-355)||(44087322-44087661)
chr8 (16-354)||(44092949-44093287)
chr8 (20-560)||(44067647-44068161)
chr8 (391-560)||(44087131-44087300)
chr8 (393-448)||(32421574-32421629)
chr8 (394-456)||(37141354-37141416)
chr8 (395-450)||(38255672-38255727)
chr8 (395-448)||(10982731-10982784)
chr8 (404-450)||(12261573-12261619)
chr8 (226-267)||(16605587-16605628)
chr8 (404-448)||(6657343-6657387)
chr8 (404-448)||(6737745-6737789)
chr8 (406-454)||(8984509-8984556)
chr8 (404-448)||(11579123-11579167)
chr8 (393-448)||(13357442-13357497)
chr8 (405-461)||(13577068-13577124)
chr8 (404-448)||(14449702-14449746)
chr8 (393-448)||(15020766-15020821)
chr8 (404-448)||(37034756-37034800)
chr8 (404-448)||(38137817-38137861)
chr8 (404-448)||(38139243-38139287)
chr8 (404-448)||(39486126-39486170)
chr8 (393-452)||(40679730-40679789)
chr8 (404-448)||(42983927-42983971)
chr8 (404-448)||(45139149-45139193)
chr8 (393-443)||(8717476-8717526)
chr8 (393-448)||(30427736-30427790)
chr8 (404-443)||(35004206-35004245)
chr8 (404-443)||(39525388-39525427)
chr8 (405-447)||(6447195-6447236)
chr8 (393-446)||(24023813-24023866)
chr8 (394-447)||(27134422-27134475)
chr8 (393-446)||(32944841-32944894)
chr8 (393-441)||(12748913-12748961)
chr8 (393-461)||(29376893-29376961)
chr8 (392-448)||(38909217-38909274)
chr8 (395-447)||(7968944-7968995)
chr8 (393-448)||(7996945-7997000)
chr8 (402-450)||(9663064-9663112)
chr8 (405-461)||(15310314-15310370)
chr8 (405-461)||(15490683-15490739)
chr8 (393-448)||(19163537-19163592)
chr8 (393-448)||(26799189-26799244)
chr8 (393-448)||(30417611-30417666)
chr8 (393-448)||(33373753-33373808)
chr8 (405-461)||(34997450-34997506)
chr8 (404-448)||(35916655-35916699)
chr8 (405-461)||(37938744-37938799)
chr8 (393-448)||(39821889-39821944)
chr8 (404-448)||(40048769-40048813)
chr8 (393-448)||(40167327-40167382)
[»] scaffold0618 (1 HSPs)
scaffold0618 (16-354)||(6624-6962)
[»] chr7 (50 HSPs)
chr7 (393-448)||(36428153-36428207)
chr7 (395-448)||(21136836-21136888)
chr7 (393-447)||(19599151-19599205)
chr7 (393-448)||(21993187-21993241)
chr7 (394-448)||(23413048-23413102)
chr7 (393-448)||(45088881-45088935)
chr7 (406-452)||(27263342-27263387)
chr7 (406-452)||(27270236-27270281)
chr7 (404-450)||(36765501-36765547)
chr7 (404-450)||(36769153-36769199)
chr7 (394-448)||(48065207-48065260)
chr7 (393-461)||(19416506-19416574)
chr7 (402-462)||(8883544-8883603)
chr7 (393-448)||(10244732-10244787)
chr7 (404-448)||(23154571-23154615)
chr7 (404-448)||(40036118-40036162)
chr7 (404-448)||(43110965-43111009)
chr7 (406-462)||(47342668-47342723)
chr7 (404-443)||(4492532-4492571)
chr7 (394-448)||(5041344-5041398)
chr7 (394-448)||(19626527-19626581)
chr7 (393-443)||(27462437-27462487)
chr7 (418-465)||(44770169-44770216)
chr7 (405-456)||(47342448-47342498)
chr7 (406-448)||(6579623-6579664)
chr7 (393-459)||(18505659-18505724)
chr7 (406-448)||(22991406-22991447)
chr7 (393-462)||(27993030-27993099)
chr7 (401-443)||(37624553-37624594)
chr7 (395-448)||(38025121-38025175)
chr7 (406-448)||(38728213-38728255)
chr7 (405-455)||(39043753-39043802)
chr7 (406-448)||(41343421-41343463)
chr7 (404-450)||(47840660-47840706)
chr7 (420-453)||(29985703-29985736)
chr7 (396-448)||(30296338-30296390)
chr7 (393-461)||(32855512-32855580)
chr7 (415-448)||(46220973-46221006)
chr7 (406-443)||(46659410-46659446)
chr7 (405-446)||(46675913-46675953)
chr7 (406-466)||(429193-429252)
chr7 (393-464)||(4905265-4905336)
chr7 (393-452)||(7872749-7872808)
chr7 (393-448)||(10025999-10026054)
chr7 (393-448)||(18714453-18714508)
chr7 (405-461)||(20135175-20135231)
chr7 (393-448)||(29726805-29726860)
chr7 (393-456)||(40187637-40187700)
chr7 (393-448)||(40808160-40808215)
chr7 (394-461)||(48103676-48103743)
[»] chr5 (60 HSPs)
chr5 (393-448)||(33645691-33645745)
chr5 (393-452)||(40837904-40837963)
chr5 (393-448)||(11720899-11720953)
chr5 (393-459)||(15148717-15148785)
chr5 (404-448)||(30503841-30503885)
chr5 (404-448)||(30544184-30544228)
chr5 (393-452)||(38495143-38495202)
chr5 (394-461)||(39529439-39529506)
chr5 (393-446)||(866028-866081)
chr5 (394-443)||(29382664-29382714)
chr5 (395-448)||(36242257-36242311)
chr5 (404-450)||(37146992-37147038)
chr5 (394-448)||(41650942-41650995)
chr5 (399-448)||(31561351-31561400)
chr5 (406-459)||(32622889-32622941)
chr5 (404-448)||(790159-790203)
chr5 (393-448)||(11637573-11637628)
chr5 (393-452)||(16579375-16579434)
chr5 (393-448)||(20721055-20721110)
chr5 (405-461)||(29178439-29178494)
chr5 (393-460)||(31877921-31877988)
chr5 (404-448)||(42111909-42111953)
chr5 (419-462)||(689538-689581)
chr5 (395-453)||(1488364-1488423)
chr5 (405-448)||(2463575-2463618)
chr5 (393-443)||(3246764-3246815)
chr5 (394-452)||(3389163-3389221)
chr5 (394-448)||(10704333-10704387)
chr5 (393-448)||(19068441-19068495)
chr5 (393-448)||(22498947-22499001)
chr5 (393-463)||(24636648-24636719)
chr5 (393-443)||(32234771-32234821)
chr5 (393-462)||(4009857-4009927)
chr5 (406-452)||(11647198-11647243)
chr5 (391-460)||(11694557-11694626)
chr5 (393-458)||(13864339-13864404)
chr5 (408-458)||(17046329-17046378)
chr5 (393-447)||(21316888-21316941)
chr5 (404-450)||(29874766-29874812)
chr5 (393-461)||(22522802-22522870)
chr5 (395-448)||(32858675-32858727)
chr5 (393-461)||(37932322-37932390)
chr5 (393-448)||(781868-781923)
chr5 (393-452)||(5614766-5614825)
chr5 (393-448)||(6489012-6489067)
chr5 (404-440)||(7536582-7536618)
chr5 (404-448)||(8314758-8314802)
chr5 (405-461)||(8545003-8545058)
chr5 (404-448)||(16166388-16166432)
chr5 (404-448)||(16488138-16488182)
chr5 (393-448)||(18589868-18589923)
chr5 (404-448)||(19361581-19361625)
chr5 (405-461)||(22555223-22555278)
chr5 (408-460)||(22665220-22665271)
chr5 (404-448)||(28746416-28746460)
chr5 (404-448)||(39803950-39803994)
chr5 (412-448)||(40155212-40155248)
chr5 (404-448)||(40506900-40506944)
chr5 (406-466)||(42505859-42505918)
chr5 (404-440)||(43396457-43396493)
[»] chr4 (41 HSPs)
chr4 (405-461)||(23628753-23628809)
chr4 (404-450)||(17976376-17976422)
chr4 (393-456)||(11949764-11949827)
chr4 (393-452)||(16431617-16431676)
chr4 (393-456)||(27537745-27537807)
chr4 (406-460)||(46853855-46853909)
chr4 (226-275)||(8731662-8731711)
chr4 (393-452)||(6610264-6610323)
chr4 (393-448)||(9946432-9946487)
chr4 (404-448)||(10581992-10582036)
chr4 (404-448)||(11180838-11180882)
chr4 (393-448)||(20383493-20383548)
chr4 (404-448)||(20681126-20681170)
chr4 (404-448)||(39651666-39651710)
chr4 (393-448)||(43034343-43034398)
chr4 (404-448)||(43117446-43117490)
chr4 (404-448)||(46045894-46045938)
chr4 (393-459)||(281585-281651)
chr4 (393-443)||(897435-897485)
chr4 (393-443)||(28435249-28435299)
chr4 (394-448)||(37193254-37193308)
chr4 (393-447)||(43722771-43722825)
chr4 (395-452)||(48226501-48226558)
chr4 (405-455)||(50772604-50772653)
chr4 (393-447)||(56204953-56205006)
chr4 (393-461)||(7230272-7230340)
chr4 (419-452)||(26610184-26610217)
chr4 (404-441)||(28361592-28361629)
chr4 (406-447)||(30380536-30380576)
chr4 (393-469)||(31041366-31041442)
chr4 (406-459)||(31352106-31352158)
chr4 (393-461)||(32139331-32139400)
chr4 (404-461)||(41144404-41144461)
chr4 (404-448)||(51153414-51153458)
chr4 (393-448)||(20799395-20799450)
chr4 (393-448)||(21318254-21318309)
chr4 (404-448)||(26097750-26097794)
chr4 (404-448)||(29099722-29099766)
chr4 (393-448)||(29908061-29908116)
chr4 (393-440)||(34664781-34664829)
chr4 (404-448)||(52620569-52620613)
[»] chr2 (40 HSPs)
chr2 (404-450)||(3079647-3079693)
chr2 (393-452)||(7645715-7645775)
chr2 (404-448)||(38709638-38709682)
chr2 (394-465)||(19189747-19189817)
chr2 (393-447)||(41859858-41859912)
chr2 (419-465)||(6471254-6471300)
chr2 (406-456)||(11817360-11817410)
chr2 (393-458)||(31815888-31815953)
chr2 (387-448)||(37522628-37522690)
chr2 (405-458)||(25598576-25598628)
chr2 (393-461)||(36359306-36359374)
chr2 (393-448)||(2256976-2257031)
chr2 (393-448)||(19189845-19189900)
chr2 (393-452)||(24592847-24592906)
chr2 (393-468)||(31837937-31838012)
chr2 (393-452)||(44694689-44694748)
chr2 (404-448)||(45474654-45474698)
chr2 (393-460)||(7302143-7302209)
chr2 (393-440)||(9581288-9581334)
chr2 (398-452)||(13196701-13196755)
chr2 (405-448)||(34977209-34977251)
chr2 (405-447)||(6723091-6723132)
chr2 (393-450)||(8781651-8781708)
chr2 (393-458)||(20565076-20565141)
chr2 (406-452)||(33966322-33966367)
chr2 (404-442)||(34912590-34912628)
chr2 (391-448)||(38879069-38879127)
chr2 (398-440)||(41204507-41204549)
chr2 (406-463)||(40257174-40257230)
chr2 (393-461)||(41763879-41763947)
chr2 (404-448)||(3243393-3243437)
chr2 (393-448)||(9547410-9547465)
chr2 (404-448)||(17032910-17032954)
chr2 (393-460)||(19976146-19976214)
chr2 (393-452)||(30089050-30089109)
chr2 (393-452)||(30125654-30125713)
chr2 (393-448)||(32063588-32063644)
chr2 (404-448)||(35423719-35423763)
chr2 (393-448)||(35456821-35456877)
chr2 (398-454)||(40099390-40099445)
[»] scaffold0021 (1 HSPs)
scaffold0021 (393-448)||(161146-161201)
[»] chr6 (28 HSPs)
chr6 (404-448)||(29976246-29976290)
chr6 (393-450)||(2726418-2726475)
chr6 (406-448)||(5414663-5414705)
chr6 (398-448)||(17505418-17505468)
chr6 (394-448)||(26320566-26320619)
chr6 (395-475)||(3863336-3863417)
chr6 (408-460)||(2108718-2108769)
chr6 (393-448)||(8629697-8629752)
chr6 (393-441)||(11456377-11456424)
chr6 (393-460)||(14772983-14773050)
chr6 (404-448)||(19988826-19988870)
chr6 (393-448)||(20744143-20744198)
chr6 (390-452)||(3358392-3358454)
chr6 (404-443)||(6018672-6018711)
chr6 (404-443)||(7541043-7541082)
chr6 (393-447)||(8569715-8569769)
chr6 (393-463)||(2546167-2546240)
chr6 (393-450)||(4455597-4455654)
chr6 (406-448)||(6160683-6160724)
chr6 (406-448)||(28757039-28757080)
chr6 (407-448)||(17382089-17382129)
chr6 (409-461)||(4922426-4922477)
chr6 (405-461)||(6833470-6833526)
chr6 (404-448)||(10945641-10945685)
chr6 (393-448)||(24349549-24349604)
chr6 (393-448)||(26548256-26548311)
chr6 (393-448)||(31971534-31971589)
chr6 (404-448)||(34207102-34207146)
[»] chr3 (53 HSPs)
chr3 (393-452)||(25441501-25441560)
chr3 (393-448)||(38130960-38131015)
chr3 (404-448)||(38361683-38361727)
chr3 (404-448)||(44762823-44762867)
chr3 (393-463)||(2186428-2186498)
chr3 (393-443)||(54203832-54203883)
chr3 (405-447)||(27397626-27397667)
chr3 (406-460)||(53221951-53222004)
chr3 (411-460)||(31272676-31272725)
chr3 (409-474)||(34326001-34326065)
chr3 (404-448)||(12101561-12101605)
chr3 (404-448)||(13337033-13337077)
chr3 (393-448)||(25340925-25340980)
chr3 (393-456)||(29631183-29631246)
chr3 (393-448)||(49082710-49082765)
chr3 (393-452)||(4216401-4216459)
chr3 (405-448)||(19468456-19468498)
chr3 (405-452)||(27532835-27532882)
chr3 (405-448)||(33771695-33771737)
chr3 (405-460)||(49710713-49710767)
chr3 (394-448)||(49975807-49975861)
chr3 (394-459)||(2078234-2078299)
chr3 (402-452)||(2096420-2096468)
chr3 (391-461)||(3176973-3177042)
chr3 (396-461)||(7738661-7738726)
chr3 (406-448)||(12043111-12043153)
chr3 (405-459)||(32909315-32909368)
chr3 (393-462)||(5186824-5186892)
chr3 (411-448)||(5293946-5293983)
chr3 (392-448)||(8127468-8127524)
chr3 (408-461)||(14827517-14827569)
chr3 (396-448)||(25874135-25874188)
chr3 (419-448)||(43796864-43796893)
chr3 (407-448)||(51250249-51250289)
chr3 (393-447)||(334848-334903)
chr3 (393-448)||(7464492-7464547)
chr3 (393-448)||(10922309-10922364)
chr3 (404-448)||(15496565-15496609)
chr3 (393-452)||(21160053-21160112)
chr3 (406-454)||(21914086-21914133)
chr3 (393-448)||(28244105-28244160)
chr3 (408-448)||(36987841-36987881)
chr3 (408-448)||(37013280-37013320)
chr3 (405-453)||(38894037-38894084)
chr3 (404-448)||(39721192-39721236)
chr3 (393-448)||(44579641-44579696)
chr3 (393-448)||(45431953-45432008)
chr3 (405-461)||(46088813-46088869)
chr3 (404-448)||(46090216-46090260)
chr3 (404-448)||(47670582-47670626)
chr3 (393-448)||(48849764-48849818)
chr3 (393-440)||(51047170-51047218)
chr3 (408-448)||(51882217-51882256)
[»] chr1 (47 HSPs)
chr1 (394-459)||(3509942-3510008)
chr1 (393-452)||(9265837-9265896)
chr1 (406-460)||(29450996-29451050)
chr1 (395-461)||(31061907-31061972)
chr1 (395-448)||(32560978-32561031)
chr1 (393-461)||(6423762-6423831)
chr1 (393-448)||(2994763-2994818)
chr1 (404-448)||(17366446-17366490)
chr1 (404-448)||(24473650-24473694)
chr1 (393-452)||(26803452-26803511)
chr1 (393-448)||(34766865-34766920)
chr1 (404-448)||(49571137-49571181)
chr1 (405-448)||(16580813-16580855)
chr1 (393-459)||(29800527-29800593)
chr1 (393-443)||(34521191-34521241)
chr1 (404-443)||(39879238-39879277)
chr1 (394-448)||(48646727-48646782)
chr1 (393-463)||(52494046-52494117)
chr1 (393-462)||(3777709-3777778)
chr1 (406-452)||(7454593-7454638)
chr1 (405-447)||(7803411-7803452)
chr1 (393-442)||(25532984-25533033)
chr1 (393-455)||(30548093-30548154)
chr1 (404-450)||(33932848-33932894)
chr1 (393-461)||(34083637-34083709)
chr1 (404-450)||(37824150-37824196)
chr1 (404-450)||(39729304-39729350)
chr1 (419-460)||(2636782-2636823)
chr1 (393-461)||(24752648-24752717)
chr1 (405-462)||(28832185-28832241)
chr1 (404-448)||(34078214-34078259)
chr1 (395-448)||(37013993-37014045)
chr1 (393-461)||(39452452-39452521)
chr1 (394-447)||(40043160-40043212)
chr1 (406-443)||(43119214-43119251)
chr1 (393-452)||(8269369-8269428)
chr1 (393-448)||(8736440-8736495)
chr1 (404-460)||(28053253-28053309)
chr1 (393-448)||(29739342-29739397)
chr1 (393-448)||(30382501-30382556)
chr1 (226-266)||(38582733-38582773)
chr1 (393-452)||(40021371-40021431)
chr1 (393-448)||(42045373-42045428)
chr1 (393-448)||(42888580-42888635)
chr1 (393-452)||(45190270-45190329)
chr1 (393-456)||(47417780-47417843)
chr1 (393-448)||(48100727-48100782)
[»] scaffold0009 (1 HSPs)
scaffold0009 (405-452)||(189604-189651)
[»] scaffold0262 (1 HSPs)
scaffold0262 (393-448)||(15931-15986)
[»] scaffold0040 (1 HSPs)
scaffold0040 (405-461)||(56776-56831)
[»] scaffold0027 (1 HSPs)
scaffold0027 (404-448)||(138127-138171)
[»] scaffold0126 (1 HSPs)
scaffold0126 (405-464)||(34902-34960)
[»] scaffold0458 (1 HSPs)
scaffold0458 (393-442)||(11152-11202)
[»] scaffold0180 (1 HSPs)
scaffold0180 (393-443)||(17742-17791)
[»] scaffold0011 (2 HSPs)
scaffold0011 (393-462)||(185254-185323)
scaffold0011 (393-448)||(7727-7782)
[»] scaffold0024 (1 HSPs)
scaffold0024 (405-450)||(110624-110669)
[»] scaffold0768 (1 HSPs)
scaffold0768 (405-461)||(6402-6458)
[»] scaffold0735 (1 HSPs)
scaffold0735 (393-448)||(1533-1588)
[»] scaffold0050 (1 HSPs)
scaffold0050 (393-448)||(53381-53436)
[»] scaffold0045 (2 HSPs)
scaffold0045 (418-462)||(63465-63509)
scaffold0045 (418-462)||(70797-70841)
[»] scaffold0031 (1 HSPs)
scaffold0031 (405-461)||(47255-47310)


Alignment Details
Target: chr8 (Bit Score: 296; Significance: 1e-166; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 16 - 355
Target Start/End: Complemental strand, 44087661 - 44087322
Alignment:
Q  16 gttacggtgttctgttggttgctcattggttttctgacaaagatgttgcagttttgaaggacagtaacggcattaccgaagatgaaatcgatggttccat 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  44087661 gttacggtgttctgttggttgctcattggttttctgacaaagatgttgcagttttgaaggacagtaacggcgttaccgaagatgaaatcgattgttccat 44087562  T
Q  116 agatgttgcagtcacggtagaattgacggttggcgtaagcatataaggtgtcttggtaacctttgaaggcgcaacggtagaaaacagagtgatcggcgcc 215  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||| ||    
T  44087561 agatgttgcagtcacggtagaattgacggttggcgtaaacatataaagtgtcttggaagcctttgaaggcgcaacggtagaaaacagagtgatcggcacc 44087462  T
Q  216 ggaacggagagctactgcttggtgtttttgtggtccggctgtgttctcaaaggtcatgtccttagctatgaaaccatctcccataacagctgcagtaatt 315  Q
    |||||||||||| ||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44087461 ggaacggagagccactgcttggtgtttttggggtcctgctgtattctcaaaggtcatgtccttagctatgaaaccatctcccataacagctgcagtaatt 44087362  T
Q  316 atttatttcattgttagaactttggatttaatttatatac 355  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  44087361 atttatttcattgttagaactttggatttaatttatatac 44087322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 16 - 354
Target Start/End: Original strand, 44092949 - 44093287
Alignment:
Q  16 gttacggtgttctgttggttgctcattggttttctgacaaagatgttgcagttttgaaggacagtaacggcattaccgaagatgaaatcgatggttccat 115  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  44092949 gttacggtgttcttttggttgctcattggttttctgacaaagatgttgcagttttgaaggacagtaacggcgttaccgaagatgaaatcgattgttccat 44093048  T
Q  116 agatgttgcagtcacggtagaattgacggttggcgtaagcatataaggtgtcttggtaacctttgaaggcgcaacggtagaaaacagagtgatcggcgcc 215  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||| ||    
T  44093049 agatgttgcagtcacggtagaattgacggttggcgtaaacatataaagtgtcttggaagcctttgaaggcgcaacggtagaaaacagagtgatcggcacc 44093148  T
Q  216 ggaacggagagctactgcttggtgtttttgtggtccggctgtgttctcaaaggtcatgtccttagctatgaaaccatctcccataacagctgcagtaatt 315  Q
    |||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  44093149 ggaacggagagccactgcttggtgtttttggggtcctgctgtattctcaaaggtcatgtccttagctatgaaaccatctcccataacacctgcagtaatt 44093248  T
Q  316 atttatttcattgttagaactttggatttaatttatata 354  Q
    ||||||||||| |||||||||||  |||||||| |||||    
T  44093249 atttatttcatagttagaactttaaatttaattcatata 44093287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 20 - 560
Target Start/End: Original strand, 44067647 - 44068161
Alignment:
Q  20 cggtgttctgttggttgctcattggttttctgacaaagatgttgcagttttgaaggacagtaacggcattaccgaagatgaaatcgatggttccatagat 119  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  44067647 cggtgttctattggttgctcattggttttctgacaaagatgttgcagttttgaaggacagtaacggcgttaccgaagatgaaatcgattgttccatagat 44067746  T
Q  120 gttgcagtcacggtagaattgacggttggcgtaagcatataaggtgtcttggtaacctttgaaggcgcaacggtagaaaacagagtgatcggcgccggaa 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||                    ||    
T  44067747 gttgcagtcacggtagaattgacggttggcgtaagcatataaggtgtcttggtaacctttgaaggcacaacggtagaa--------------------aa 44067826  T
Q  220 cggagagctactgcttggtgtttttgtggtccggctgtgttctcaaaggtcatgtccttagctatgaaaccatctcccataacagctgcagtaattattt 319  Q
    |||| | |||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||    
T  44067827 cggacaactactggttggtgtttttgtggtccgactgtgttctcaaaggtcatgtccttagctatgaaaccatctcccataacacctacagtaattattt 44067926  T
Q  320 atttcattgttagaactttgga-tttaatttatatacannnnnnnnnnnnnnnnnngtgatgatcgtggtttgtggtttgaaccccgaccttgcatatat 418  Q
    ||||||| |||||||||||| | |||||||||||||||                  |||||| ||       |||||||||||| ||||||||||||| |    
T  44067927 atttcatcgttagaactttgaattttaatttatatacacttttttttttttttttggtgatggtc-------gtggtttgaacctcgaccttgcatattt 44068019  T
Q  419 ttatacattgtccataccaactgagttaagttcatgagaacaatttatatttatctagtcgtacaaatcaatggctctaaattaccttataagaaatgta 518  Q
    |||| ||||||||| | |||||||| ||| |||| |||||||||||||||| |||||||||||||||| | ||||||||| ||||| || ||||||| ||    
T  44068020 ttatgcattgtccacatcaactgagctaaattcacgagaacaatttatattcatctagtcgtacaaatgattggctctaatttaccgtaaaagaaattta 44068119  T
Q  519 ccattacaatgcatgatattgtcttagataagttatcgtttc 560  Q
    ||||||||||||||  |||| |||| || |||||||||||||    
T  44068120 ccattacaatgcattgtattttctttgaaaagttatcgtttc 44068161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 391 - 560
Target Start/End: Complemental strand, 44087300 - 44087131
Alignment:
Q  391 gtggtttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaatttatatttatctagtcgtacaaatcaat 490  Q
    |||||||||||||||||||||||||| ||||| |||||| ||||||||||| | ||||||||  ||||||||||||||| |||||||||||||||| | |    
T  44087300 gtggtttgaaccccgaccttgcatatttttatgcattgtacataccaactgggctaagttcacaagaacaatttatattcatctagtcgtacaaatgatt 44087201  T
Q  491 ggctctaaattaccttataagaaatgtaccattacaatgcatgatattgtcttagataagttatcgtttc 560  Q
    |||||||| ||||| || ||||||| ||||||||||||||||  |||| |||| || |||||||||||||    
T  44087200 ggctctaatttaccgtaaaagaaatttaccattacaatgcattgtattttctttgaaaagttatcgtttc 44087131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 32421629 - 32421574
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||    
T  32421629 ggtttgaaccccggaccttgcatatatt-atatattgtccataccaactgagttaag 32421574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 394 - 456
Target Start/End: Complemental strand, 37141416 - 37141354
Alignment:
Q  394 gtttgaaccccga-ccttgcatatatttatacattgtccataccaactgagttaagttcatgag 456  Q
    ||||||||||||| ||||||||||||| || ||||||||||||||||||| ||||||| |||||    
T  37141416 gtttgaaccccgaaccttgcatatatt-atgcattgtccataccaactgaattaagtttatgag 37141354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 395 - 450
Target Start/End: Complemental strand, 38255727 - 38255672
Alignment:
Q  395 tttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaagtt 450  Q
    ||||||||| |||||||||||| ||||||||| ||||| |||||||||| ||||||    
T  38255727 tttgaacccagaccttgcatatttttatacatcgtccacaccaactgagctaagtt 38255672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 448
Target Start/End: Complemental strand, 10982784 - 10982731
Alignment:
Q  395 tttgaaccccga-ccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||    
T  10982784 tttgaaccccgaaccttgcatatatt-atatattgtccataccaactgagttaag 10982731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 450
Target Start/End: Original strand, 12261573 - 12261619
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaagtt 450  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||||    
T  12261573 cgaccttgcatatatttatacattgtctatatcaactgagctaagtt 12261619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 226 - 267
Target Start/End: Complemental strand, 16605628 - 16605587
Alignment:
Q  226 gctactgcttggtgtttttgtggtccggctgtgttctcaaag 267  Q
    ||||||||||||||||||||||| ||||||||||||| ||||    
T  16605628 gctactgcttggtgtttttgtggaccggctgtgttcttaaag 16605587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 6657387 - 6657343
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||    
T  6657387 cgaccttgcatatatttatatattgtctatatcaactgagttaag 6657343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 6737789 - 6737745
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||||||||||| |||||| ||| |||||||||||||    
T  6737789 cgaccttgcatatatttatatattgtctatatcaactgagttaag 6737745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 454
Target Start/End: Original strand, 8984509 - 8984556
Alignment:
Q  406 accttgcatatatttatacattgtccataccaactgagttaagttcatg 454  Q
    |||||||||||||| ||||||| |||||||||||||||||||| |||||    
T  8984509 accttgcatatatt-atacattatccataccaactgagttaagctcatg 8984556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 11579167 - 11579123
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||    
T  11579167 cgaccttgcatatatttatacattgtctatatcaactgagctaag 11579123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 13357442 - 13357497
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||| || |||||||||||||| || |||||||||||||||||||||||||    
T  13357442 ggtttgaacctcgtaccttgcatatatt-atgcattgtccataccaactgagttaag 13357497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 13577124 - 13577068
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    ||||||||||||  |||| ||||||||||||||||||||||||| ||| ||| ||||    
T  13577124 gaccttgcatatgattatgcattgtccataccaactgagttaagctcaggaggacaa 13577068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 14449702 - 14449746
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||    
T  14449702 cgaccttgcatatatttatacattgtctatatcaactgagctaag 14449746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 15020821 - 15020766
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||| | |||||||||||| |||||||||||||||||||||| |||||    
T  15020821 ggtttgaaccccggatcttgcatatatt-atacattgtccataccaactgaattaag 15020766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 37034800 - 37034756
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||||    
T  37034800 cgaccttgcatatatttatgcattgtctatatcaactgagttaag 37034756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 38137817 - 38137861
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||    
T  38137817 cgaccttgcatatatttatacattgtctatatcaactgagctaag 38137861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 38139287 - 38139243
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||    
T  38139287 cgaccttgcatatatttatacattgtctatatcaactgagctaag 38139243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 39486126 - 39486170
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||    
T  39486126 cgaccttgcatatatttatacattgtctataacaactgagctaag 39486170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 40679730 - 40679789
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    ||||||||||||| ||||||||||| |||||| |||| |||||||||||||| ||||||||    
T  40679730 ggtttgaaccccggaccttgcatat-tttatatattgaccataccaactgagctaagttca 40679789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 42983971 - 42983927
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||    
T  42983971 cgaccttgcatatatttatacattgtctatatcaactgagctaag 42983927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 45139149 - 45139193
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||| ||||||||||||||||| ||| |||||||||||||    
T  45139149 cgaccttgcgtatatttatacattgtctatatcaactgagttaag 45139193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 443
Target Start/End: Original strand, 8717476 - 8717526
Alignment:
Q  393 ggtttgaaccccga-ccttgcatatatttatacattgtccataccaactgag 443  Q
    |||||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  8717476 ggtttgaaccccgaaccttgcatatatt-atgcattgtccataccaactgag 8717526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 30427790 - 30427736
Alignment:
Q  393 ggtttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||  ||||||||||||||| || |||||||||||||||||||| ||||    
T  30427790 ggtttgaacctggaccttgcatatatt-atgcattgtccataccaactgagctaag 30427736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 443
Target Start/End: Complemental strand, 35004245 - 35004206
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgag 443  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  35004245 cgaccttgcatatatttatacattgtctatatcaactgag 35004206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 443
Target Start/End: Complemental strand, 39525427 - 39525388
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgag 443  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  39525427 cgaccttgcatatatttatacattgtctatatcaactgag 39525388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 405 - 447
Target Start/End: Complemental strand, 6447236 - 6447195
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaa 447  Q
    ||||||||||||||| || ||||||||||||||||||||||||    
T  6447236 gaccttgcatatatt-atgcattgtccataccaactgagttaa 6447195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 24023813 - 24023866
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagtta 446  Q
    ||||||||| || |||||||||||| ||||| |||||||||||||||||||||||    
T  24023813 ggtttgaacaccagaccttgcatat-tttatgcattgtccataccaactgagtta 24023866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 394 - 447
Target Start/End: Original strand, 27134422 - 27134475
Alignment:
Q  394 gtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaa 447  Q
    |||||||||||| || ||||||||||| ||||||||| |||||||||||||||||    
T  27134422 gtttgaaccccggactttgcatatatt-atacattgttcataccaactgagttaa 27134475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 32944841 - 32944894
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagtta 446  Q
    |||||||||| | |||||||||||| ||||| |||||||||||||||||||||||    
T  32944841 ggtttgaacctcagaccttgcatat-tttatgcattgtccataccaactgagtta 32944894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 441
Target Start/End: Complemental strand, 12748961 - 12748913
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactg 441  Q
    ||||||||||||| |||||||||||||| || ||||||||||||||||||    
T  12748961 ggtttgaaccccggaccttgcatatatt-atgcattgtccataccaactg 12748913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 461
Target Start/End: Complemental strand, 29376961 - 29376893
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    ||||||||| || ||||||||||||||| |  ||||||||||||||||||||||||| ||| ||| ||||    
T  29376961 ggtttgaactccagaccttgcatatatt-acgcattgtccataccaactgagttaagctcacgaggacaa 29376893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 448
Target Start/End: Complemental strand, 38909274 - 38909217
Alignment:
Q  392 tggtttgaaccc-cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||| |||||| ||| ||||||||||||||||||||||| ||| |||||||| ||||    
T  38909274 tggttcgaacccgcgatcttgcatatatttatacattgtctatatcaactgagctaag 38909217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 395 - 447
Target Start/End: Original strand, 7968944 - 7968995
Alignment:
Q  395 tttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaa 447  Q
    ||||||||| ||||||||||||| |||| |||||||| |||||||||| ||||    
T  7968944 tttgaacccggaccttgcatata-ttatgcattgtccttaccaactgaattaa 7968995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 7997000 - 7996945
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||| ||||||||||||||| || | |||||||||||||||||| ||||    
T  7997000 ggtttgaaccccagaccttgcatatatt-atgcgttgtccataccaactgagctaag 7996945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 402 - 450
Target Start/End: Original strand, 9663064 - 9663112
Alignment:
Q  402 cccgaccttgcatatatttatacattgtccataccaactgagttaagtt 450  Q
    ||||||||| |||||  |||| |||||||||||||||||||| ||||||    
T  9663064 cccgaccttacatattattatgcattgtccataccaactgagctaagtt 9663112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 15310370 - 15310314
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    |||||||||||||||||| ||||||| ||| |||||||| |||| ||| ||| ||||    
T  15310370 gaccttgcatatatttatgcattgtctatatcaactgagctaagctcacgaggacaa 15310314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 15490739 - 15490683
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    |||||||||||||||||| ||||||| ||| |||||||| |||| ||| ||| ||||    
T  15490739 gaccttgcatatatttatgcattgtctatatcaactgagctaagctcacgaggacaa 15490683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 19163537 - 19163592
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||| |||||||||| ||| || |||||||||||||||||||| ||||    
T  19163537 ggtttgaaccccggaccttgcataaatt-atgcattgtccataccaactgagctaag 19163592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 26799244 - 26799189
Alignment:
Q  393 ggtttgaaccccga-ccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||| |||||||| |||||||||| ||||| |||||||| ||||||||||||||||    
T  26799244 ggttttaaccccgaaccttgcatat-tttatgcattgtccctaccaactgagttaag 26799189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 30417611 - 30417666
Alignment:
Q  393 ggtttgaaccccga-ccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||||| || |||||||||| |||||||||| |||||||||||| ||||    
T  30417611 ggtttgaaccccgaaccatgcatatatt-atacattgtctataccaactgagctaag 30417666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 33373753 - 33373808
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||| |||||| |||||||| ||  ||||||||||||||||||||||||    
T  33373753 ggtttgaaccccagaccttacatatatt-atgaattgtccataccaactgagttaag 33373808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 34997506 - 34997450
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    |||||||||||||||||| ||||||| ||| |||||||| |||| ||| ||| ||||    
T  34997506 gaccttgcatatatttatgcattgtctatatcaactgagctaagctcacgaggacaa 34997450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 35916655 - 35916699
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||||||||||| |||||| ||| |||||||| ||||    
T  35916655 cgaccttgcatatatttatatattgtctatatcaactgagctaag 35916699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 461
Target Start/End: Original strand, 37938744 - 37938799
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    ||||||||||||||| || |||| ||||||||| ||||| |||| ||||||||||||    
T  37938744 gaccttgcatatatt-atgcattatccataccagctgagctaagctcatgagaacaa 37938799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 39821944 - 39821889
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||| ||||||||||||||| || |||||||| ||||||||||| ||||    
T  39821944 ggtttgaaccccagaccttgcatatatt-atgcattgtccctaccaactgagctaag 39821889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 40048769 - 40048813
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||| ||||||| ||| |||||||| ||||    
T  40048769 cgaccttgcatatatttatgcattgtctatatcaactgagctaag 40048813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 40167382 - 40167327
Alignment:
Q  393 ggtttgaaccccga-ccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||| ||||| ||||| ||||||| || |||||||||||||||||||||||||    
T  40167382 ggtttgaatcccgaaccttgtatatatt-atgcattgtccataccaactgagttaag 40167327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 275; Significance: 1e-153; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 275; E-Value: 1e-153
Query Start/End: Original strand, 16 - 354
Target Start/End: Complemental strand, 6962 - 6624
Alignment:
Q  16 gttacggtgttctgttggttgctcattggttttctgacaaagatgttgcagttttgaaggacagtaacggcattaccgaagatgaaatcgatggttccat 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  6962 gttacggtgttctgttggttgctcattggttttctgacaaagatgttgcagttttgaaggacagtaacggcgttaccgaagatgaaatcgattgttccat 6863  T
Q  116 agatgttgcagtcacggtagaattgacggttggcgtaagcatataaggtgtcttggtaacctttgaaggcgcaacggtagaaaacagagtgatcggcgcc 215  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||| ||    
T  6862 agatgttgcagtcacggtagaattgacggttggcgtaaacatataaagtgtcttggaagcctttgaaggcgcaacggtagaaaacagagtgatcggcacc 6763  T
Q  216 ggaacggagagctactgcttggtgtttttgtggtccggctgtgttctcaaaggtcatgtccttagctatgaaaccatctcccataacagctgcagtaatt 315  Q
    |||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6762 ggaacggagagccactgcttggtgtttttggggtcctgctgtattctcaaaggtcatgtccttagctatgaaaccatctcccataacacctgcagtaatt 6663  T
Q  316 atttatttcattgttagaactttggatttaatttatata 354  Q
    ||||||||||| |||||||||||  |||||||| |||||    
T  6662 atttatttcatagttagaactttaaatttaattcatata 6624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 9e-16; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 36428207 - 36428153
Alignment:
Q  393 ggtttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  36428207 ggttcgaaccccgaccttgcatat-tttatacattgtccataccaactgagttaag 36428153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 395 - 448
Target Start/End: Complemental strand, 21136888 - 21136836
Alignment:
Q  395 tttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||| | |||||||||||||| ||||||||||||||||||||||||||||    
T  21136888 tttgaacctcaaccttgcatatatt-atacattgtccataccaactgagttaag 21136836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 447
Target Start/End: Complemental strand, 19599205 - 19599151
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaa 447  Q
    ||||||||||||| |||||||||||||| || ||||||||||||||||||||||||    
T  19599205 ggtttgaaccccggaccttgcatatatt-atgcattgtccataccaactgagttaa 19599151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 21993241 - 21993187
Alignment:
Q  393 ggtttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||| |||| |||||||||| ||||| |||||||||||||||||||||||||    
T  21993241 ggtttgaaacccggccttgcatat-tttatgcattgtccataccaactgagttaag 21993187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 394 - 448
Target Start/End: Original strand, 23413048 - 23413102
Alignment:
Q  394 gtttgaac-cccgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||| |||||||||||||||||| || |||||||||||||||||||||||||    
T  23413048 gtttgaactcccgaccttgcatatatt-atgcattgtccataccaactgagttaag 23413102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 45088935 - 45088881
Alignment:
Q  393 ggtttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||| |||| |||||| |||||||| |||||||||    
T  45088935 ggtttgaaccccgaccttgcatata-ttatgcattgttcataccaattgagttaag 45088881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 452
Target Start/End: Complemental strand, 27263387 - 27263342
Alignment:
Q  406 accttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    |||||||||||||| || |||||||||||||||||||||||||||||    
T  27263387 accttgcatatatt-atgcattgtccataccaactgagttaagttca 27263342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 452
Target Start/End: Complemental strand, 27270281 - 27270236
Alignment:
Q  406 accttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    |||||||||||||| || |||||||||||||||||||||||||||||    
T  27270281 accttgcatatatt-atgcattgtccataccaactgagttaagttca 27270236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 450
Target Start/End: Complemental strand, 36765547 - 36765501
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaagtt 450  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||||    
T  36765547 cgaccttgcatatatttatacattgtctatatcaactgagctaagtt 36765501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 450
Target Start/End: Complemental strand, 36769199 - 36769153
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaagtt 450  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||||    
T  36769199 cgaccttgcatatatttatacattgtctatatcaactgagctaagtt 36769153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 448
Target Start/End: Complemental strand, 48065260 - 48065207
Alignment:
Q  394 gtttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||||||||||||||| ||||  |||||||||||||| |||||||||    
T  48065260 gtttgaaccccgaccttgcatata-ttatgaattgtccataccaattgagttaag 48065207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 461
Target Start/End: Complemental strand, 19416574 - 19416506
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    ||||||||||||| ||||||||||| ||||| |||||||||||||||||||| |||| ||| ||| ||||    
T  19416574 ggtttgaaccccggaccttgcatat-tttatgcattgtccataccaactgagctaagctcacgaggacaa 19416506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 402 - 462
Target Start/End: Complemental strand, 8883603 - 8883544
Alignment:
Q  402 cccgaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaat 462  Q
    |||||||||||| ||||| || ||||||||||||||||||||||||| ||| ||| |||||    
T  8883603 cccgaccttgcacatatt-atgcattgtccataccaactgagttaagctcacgaggacaat 8883544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 10244787 - 10244732
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||| |||||||||||||| || |||||||||||||||||||| ||||    
T  10244787 ggtttgaaccccggaccttgcatatatt-atgcattgtccataccaactgagctaag 10244732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 23154615 - 23154571
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||    
T  23154615 cgaccttgcatatatttatacattgtctatatcaactgagctaag 23154571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 40036118 - 40036162
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||    
T  40036118 cgaccttgcatatatttatacattgtctatatcaactgagctaag 40036162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 43111009 - 43110965
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||| | ||| |||||||||||||    
T  43111009 cgaccttgcatatatttatacattgcctatatcaactgagttaag 43110965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 406 - 462
Target Start/End: Complemental strand, 47342723 - 47342668
Alignment:
Q  406 accttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaat 462  Q
    ||||||||||| ||||| |||||||||||||||||||| |||||||| ||| |||||    
T  47342723 accttgcatat-tttatgcattgtccataccaactgagctaagttcacgaggacaat 47342668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 443
Target Start/End: Original strand, 4492532 - 4492571
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgag 443  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  4492532 cgaccttgcatatatttatacattgtcgatatcaactgag 4492571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 448
Target Start/End: Complemental strand, 5041398 - 5041344
Alignment:
Q  394 gtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||| ||||||||||||||| || ||||||||||||||||| |||||||    
T  5041398 gtttgaaccccagaccttgcatatatt-atgcattgtccataccaactcagttaag 5041344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 448
Target Start/End: Original strand, 19626527 - 19626581
Alignment:
Q  394 gtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||| |||||||||||||| || ||||||||| |||||||||||||||    
T  19626527 gtttgaaccccggaccttgcatatatt-atgcattgtccaaaccaactgagttaag 19626581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 443
Target Start/End: Original strand, 27462437 - 27462487
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgag 443  Q
    ||||||||||||| |||||||||||||| || ||||||||||||||||||||    
T  27462437 ggtttgaaccccggaccttgcatatatt-atgcattgtccataccaactgag 27462487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 418 - 465
Target Start/End: Original strand, 44770169 - 44770216
Alignment:
Q  418 tttatacattgtccataccaactgagttaagttcatgagaacaattta 465  Q
    ||||| ||||||||||||||||||||||||||| | ||||||| ||||    
T  44770169 tttatgcattgtccataccaactgagttaagtttacgagaacatttta 44770216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 456
Target Start/End: Original strand, 47342448 - 47342498
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaagttcatgag 456  Q
    ||||||||||||||| || ||||||||| ||||||||||||||| |||||||    
T  47342448 gaccttgcatatatt-atgcattgtccaaaccaactgagttaagctcatgag 47342498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 448
Target Start/End: Complemental strand, 6579664 - 6579623
Alignment:
Q  406 accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||| ||||||||||||||||||||| |||||||||    
T  6579664 accttgcatat-tttatacattgtccataccaattgagttaag 6579623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 459
Target Start/End: Original strand, 18505659 - 18505724
Alignment:
Q  393 ggtttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaac 459  Q
    ||||||||||| || ||||||||| ||||| |||||||| ||||||||||| |||| ||| ||||||    
T  18505659 ggtttgaacccggatcttgcatat-tttatgcattgtccctaccaactgagctaagctcacgagaac 18505724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 448
Target Start/End: Original strand, 22991406 - 22991447
Alignment:
Q  406 accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||||| || |||||||||||||||||||||||||    
T  22991406 accttgcatatatt-atgcattgtccataccaactgagttaag 22991447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 462
Target Start/End: Original strand, 27993030 - 27993099
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaat 462  Q
    |||||||||||  |||||||||||| ||||| |||||| |||||||||||||||||| ||| ||| |||||    
T  27993030 ggtttgaaccctagaccttgcatat-tttatgcattgttcataccaactgagttaagctcacgaggacaat 27993099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 443
Target Start/End: Complemental strand, 37624594 - 37624553
Alignment:
Q  401 ccccgaccttgcatatatttatacattgtccataccaactgag 443  Q
    ||||||||||||||||||| || ||||||||||||||||||||    
T  37624594 ccccgaccttgcatatatt-atgcattgtccataccaactgag 37624553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 448
Target Start/End: Original strand, 38025121 - 38025175
Alignment:
Q  395 tttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||| ||||| ||||| ||||| |||| ||||||||||||||||||||    
T  38025121 tttgaaccccggaccttacatatttttattcattatccataccaactgagttaag 38025175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 448
Target Start/End: Complemental strand, 38728255 - 38728213
Alignment:
Q  406 accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||| ||||| |||||||||||||||||||| ||||    
T  38728255 accttgcatatttttatgcattgtccataccaactgagctaag 38728213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 405 - 455
Target Start/End: Complemental strand, 39043802 - 39043753
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaagttcatga 455  Q
    ||||| ||||||||| || ||||||||||||||||||||||||| ||||||    
T  39043802 gacctagcatatatt-atgcattgtccataccaactgagttaagctcatga 39043753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 448
Target Start/End: Original strand, 41343421 - 41343463
Alignment:
Q  406 accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||| ||| |||||||| ||||    
T  41343421 accttgcatatatttatacattgtctatatcaactgagctaag 41343463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 450
Target Start/End: Complemental strand, 47840706 - 47840660
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaagtt 450  Q
    ||||||||||||||||||||||||||| ||| ||| |||| ||||||    
T  47840706 cgaccttgcatatatttatacattgtctatatcaattgagctaagtt 47840660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 420 - 453
Target Start/End: Complemental strand, 29985736 - 29985703
Alignment:
Q  420 tatacattgtccataccaactgagttaagttcat 453  Q
    ||||||||||||||||||||||||||||| ||||    
T  29985736 tatacattgtccataccaactgagttaagctcat 29985703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 448
Target Start/End: Complemental strand, 30296390 - 30296338
Alignment:
Q  396 ttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||| ||||||||||||||| ||||||||||| ||||||||||| ||||    
T  30296390 ttgaaccccagaccttgcatatatt-atacattgtccttaccaactgagctaag 30296338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 461
Target Start/End: Complemental strand, 32855580 - 32855512
Alignment:
Q  393 ggtttgaaccccgacctt-gcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    ||||||||| |||| ||| ||||||||| || |||| | |||| ||||||||||||||||||||||||||    
T  32855580 ggtttgaactccgaactttgcatatatt-atgcattattcatatcaactgagttaagttcatgagaacaa 32855512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 448
Target Start/End: Original strand, 46220973 - 46221006
Alignment:
Q  415 atatttatacattgtccataccaactgagttaag 448  Q
    |||||||| |||||||||||||||||||||||||    
T  46220973 atatttatgcattgtccataccaactgagttaag 46221006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 443
Target Start/End: Original strand, 46659410 - 46659446
Alignment:
Q  406 accttgcatatatttatacattgtccataccaactgag 443  Q
    |||||||||||||| |||||||||||||||||||||||    
T  46659410 accttgcatatatt-atacattgtccataccaactgag 46659446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 446
Target Start/End: Complemental strand, 46675953 - 46675913
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagtta 446  Q
    |||||||||||| |||||||||||||| ||||||||||||||    
T  46675953 gaccttgcatat-tttatacattgtccttaccaactgagtta 46675913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 406 - 466
Target Start/End: Original strand, 429193 - 429252
Alignment:
Q  406 accttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaatttat 466  Q
    |||||||||||||| ||  ||| |||||| ||||||||||||| ||| |||||||||||||    
T  429193 accttgcatatatt-atgtattatccatatcaactgagttaagctcacgagaacaatttat 429252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 464
Target Start/End: Complemental strand, 4905336 - 4905265
Alignment:
Q  393 ggtttgaaccccga-ccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaattt 464  Q
    ||||||||| |||| |||||||||| ||||| ||||||||| | ||||||||||||| ||| ||| |||||||    
T  4905336 ggtttgaactccgaaccttgcatat-tttatgcattgtccacaacaactgagttaagctcacgaggacaattt 4905265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 7872749 - 7872808
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    |||| ||||||| ||||||||||||||| || |||||||| ||||||||||| ||||||||    
T  7872749 ggttcgaaccccagaccttgcatatatt-atgcattgtccttaccaactgagctaagttca 7872808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 10026054 - 10025999
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||  ||||||||||| ||||| ||||||||| |||||||||||||||    
T  10026054 ggtttgaaccccataccttgcatat-tttatgcattgtccaaaccaactgagttaag 10025999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 18714508 - 18714453
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||| |||||||||||||| || |||||||| ||||||||||| ||||    
T  18714508 ggtttgaaccccggaccttgcatatatt-atgcattgtccttaccaactgagctaag 18714453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 461
Target Start/End: Original strand, 20135175 - 20135231
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    ||||||||||||||||||||||||||  || |||||||| |||| ||| ||| ||||    
T  20135175 gaccttgcatatatttatacattgtctttatcaactgagctaagctcacgaggacaa 20135231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 29726860 - 29726805
Alignment:
Q  393 ggtttgaaccccga-ccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||||| ||||||||||||| ||||||||| |||  |||||||||||||    
T  29726860 ggtttgaaccccgaaccttgcatatatt-atacattgttcatgtcaactgagttaag 29726805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 40187637 - 40187700
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaagttcatgag 456  Q
    |||||||||| | |||||| |||||||| || |||||||| |||||||||||||||| |||||||    
T  40187637 ggtttgaaccgcagaccttacatatatt-atgcattgtccctaccaactgagttaagctcatgag 40187700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 40808160 - 40808215
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||| ||||||||||| ||||| || |||||| |||||||||||||||    
T  40808160 ggtttgaaccccggaccttgcatat-tttatgcactgtccaaaccaactgagttaag 40808215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 394 - 461
Target Start/End: Original strand, 48103676 - 48103743
Alignment:
Q  394 gtttgaaccccga-ccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    ||||||||||||| |||||||||| ||||| ||||||||  ||||||||||||||| ||| ||| ||||    
T  48103676 gtttgaaccccgaaccttgcatat-tttatgcattgtcccaaccaactgagttaagctcacgaggacaa 48103743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 9e-16; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 33645691 - 33645745
Alignment:
Q  393 ggtttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  33645691 ggttcgaaccccgaccttgcatatatt-atacattgtccataccaactgagttaag 33645745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 40837904 - 40837963
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    ||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||    
T  40837904 ggtttgaaccccggaccttgcatat-tttatatattgtccataccaactgagttaagttca 40837963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 11720953 - 11720899
Alignment:
Q  393 ggtttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||    
T  11720953 ggtttgaaccccgaccttgcatata-ttatgcattgtccctaccaactgagttaag 11720899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 459
Target Start/End: Complemental strand, 15148785 - 15148717
Alignment:
Q  393 ggtttgaaccccg-accttgcatatattt-atacattgtccataccaactgagttaagttcatgagaac 459  Q
    |||| |||||||| ||||||||||||| | || ||||||||||||||||||||||||||||| ||||||    
T  15148785 ggttcgaaccccggaccttgcatatatatcatgcattgtccataccaactgagttaagttcacgagaac 15148717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 30503841 - 30503885
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||    
T  30503841 cgaccttgcatatatttatacattgtcaatatcaactgagttaag 30503885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 30544184 - 30544228
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||    
T  30544184 cgaccttgcatatatttatacattgtcaatatcaactgagttaag 30544228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 38495202 - 38495143
Alignment:
Q  393 ggtttgaaccccga-ccttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    |||||||||||||| |||||||||| ||||| |||| ||||||||||||||||||||||||    
T  38495202 ggtttgaaccccgaaccttgcatat-tttatgcattatccataccaactgagttaagttca 38495143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 394 - 461
Target Start/End: Complemental strand, 39529506 - 39529439
Alignment:
Q  394 gtttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    ||||||||||||||||||||||| ||||| |||||||| | | ||||||| |||| ||| ||||||||    
T  39529506 gtttgaaccccgaccttgcatatttttatgcattgtccctgctaactgagctaagctcacgagaacaa 39529439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 446
Target Start/End: Original strand, 866028 - 866081
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagtta 446  Q
    ||||||||||||| ||||||||||| |||||||||| ||||||||||||||||||    
T  866028 ggtttgaaccccggaccttgcatat-tttatacattatccataccaactgagtta 866081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 443
Target Start/End: Original strand, 29382664 - 29382714
Alignment:
Q  394 gtttgaaccc-cgaccttgcatatatttatacattgtccataccaactgag 443  Q
    |||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  29382664 gtttgaacccgcgaccttgcatatatttatacattgtctatatcaactgag 29382714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 448
Target Start/End: Complemental strand, 36242311 - 36242257
Alignment:
Q  395 tttgaaccc-cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||| ||||||||||||||||||||||||||| ||| |||||||| ||||    
T  36242311 tttgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaag 36242257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 450
Target Start/End: Complemental strand, 37147038 - 37146992
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaagtt 450  Q
    ||||||||||||||||||||||||||  ||| |||||||||||||||    
T  37147038 cgaccttgcatatatttatacattgtttatatcaactgagttaagtt 37146992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 448
Target Start/End: Original strand, 41650942 - 41650995
Alignment:
Q  394 gtttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||| | ||||||||||||||| || |||||||||||||||||||||||||    
T  41650942 gtttgaactcggaccttgcatatatt-atgcattgtccataccaactgagttaag 41650995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 399 - 448
Target Start/End: Original strand, 31561351 - 31561400
Alignment:
Q  399 aaccccgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||| ||||||||||||  |||| |||||||||||||||||||||||||    
T  31561351 aacccggaccttgcatattattatgcattgtccataccaactgagttaag 31561400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 406 - 459
Target Start/End: Complemental strand, 32622941 - 32622889
Alignment:
Q  406 accttgcatatatttatacattgtccataccaactgagttaagttcatgagaac 459  Q
    ||||||||||| |||||||||||||||||||||||||| ||| |||| ||||||    
T  32622941 accttgcatat-tttatacattgtccataccaactgagctaaattcacgagaac 32622889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 790159 - 790203
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||    
T  790159 cgaccttgcatatatttatacattgtctatatcaactgagctaag 790203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 11637573 - 11637628
Alignment:
Q  393 ggtttgaaccccga-ccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||| ||||||||| |||||||||| ||||| |||||||||||||||||||||||||    
T  11637573 ggttcgaaccccgaaccttgcatat-tttatgcattgtccataccaactgagttaag 11637628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 16579375 - 16579434
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    |||||||||| || |||||||||||||| || |||||| ||||||||||||||||||||||    
T  16579375 ggtttgaaccacggaccttgcatatatt-atgcattgttcataccaactgagttaagttca 16579434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 20721110 - 20721055
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||| |||||||||||||| ||  ||||||||||||||||||||||||    
T  20721110 ggtttgaaccccggaccttgcatatatt-atgtattgtccataccaactgagttaag 20721055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 29178494 - 29178439
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    ||||||| |||| ||||| ||||||||||||||||||||||||| ||| ||||||||    
T  29178494 gaccttgtatat-tttatgcattgtccataccaactgagttaagctcacgagaacaa 29178439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 460
Target Start/End: Complemental strand, 31877988 - 31877921
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaaca 460  Q
    |||||||||||| || |||||||||||| || ||||||||||||||| ||||||||| ||| |||||||    
T  31877988 ggtttgaacccctgatcttgcatatatt-atgcattgtccataccaagtgagttaagctcacgagaaca 31877921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 42111909 - 42111953
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||    
T  42111909 cgaccttgcatatatttatacattgtcaatatcaactgagctaag 42111953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 462
Target Start/End: Complemental strand, 689581 - 689538
Alignment:
Q  419 ttatacattgtccataccaactgagttaagttcatgagaacaat 462  Q
    |||||||||||||||| ||||||||||||||||| ||| |||||    
T  689581 ttatacattgtccatatcaactgagttaagttcacgaggacaat 689538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 395 - 453
Target Start/End: Complemental strand, 1488423 - 1488364
Alignment:
Q  395 tttgaaccccgac-cttgcatatatttatacattgtccataccaactgagttaagttcat 453  Q
    ||||||||||||  ||||||||| ||||| |||||||||||||||||||| |||| ||||    
T  1488423 tttgaaccccgaatcttgcatatttttatgcattgtccataccaactgagctaagctcat 1488364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 448
Target Start/End: Complemental strand, 2463618 - 2463575
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||||||||||||||||| ||| |||| ||||||||    
T  2463618 gaccttgcatatatttatacattgtcaatatcaacggagttaag 2463575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 443
Target Start/End: Complemental strand, 3246815 - 3246764
Alignment:
Q  393 ggtttgaaccc-cgaccttgcatatatttatacattgtccataccaactgag 443  Q
    ||||||||||| ||||||||||||||||||||||||||| ||| ||| ||||    
T  3246815 ggtttgaacccgcgaccttgcatatatttatacattgtctatatcaattgag 3246764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 452
Target Start/End: Complemental strand, 3389221 - 3389163
Alignment:
Q  394 gtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    ||||||||||| || |||||||||||| || ||||||||||||||||||||||| |||||    
T  3389221 gtttgaaccccagatcttgcatatatt-atgcattgtccataccaactgagttatgttca 3389163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 448
Target Start/End: Original strand, 10704333 - 10704387
Alignment:
Q  394 gtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||| ||||||||||| ||||| |||||||||||||||||||| ||||    
T  10704333 gtttgaaccccggaccttgcatat-tttatgcattgtccataccaactgagctaag 10704387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 19068441 - 19068495
Alignment:
Q  393 ggtttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||| |||||||||||| |||| |||| ||||||||||||||| ||||    
T  19068441 ggtttgaaccccaaccttgcatata-ttatgcattatccataccaactgagctaag 19068495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 22499001 - 22498947
Alignment:
Q  393 ggtttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||| |||||| ||||||||||||||| || |||||||| ||||||||||||||||    
T  22499001 ggttcgaacccagaccttgcatatatt-atgcattgtccttaccaactgagttaag 22498947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 463
Target Start/End: Original strand, 24636648 - 24636719
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaatt 463  Q
    |||||||||| || ||||||||||| ||||| |||||||||||| ||||||| ||||| || ||| ||||||    
T  24636648 ggtttgaacctcggaccttgcatatttttatgcattgtccatactaactgagctaagtccacgaggacaatt 24636719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 443
Target Start/End: Complemental strand, 32234821 - 32234771
Alignment:
Q  393 ggtttgaaccccgaccttgcatatatttatacattgtcc-ataccaactgag 443  Q
    |||||||||||||||||||||||| ||||| |||||||| ||||||||||||    
T  32234821 ggtttgaaccccgaccttgcatat-tttatgcattgtccgataccaactgag 32234771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 462
Target Start/End: Complemental strand, 4009927 - 4009857
Alignment:
Q  393 ggtttgaaccccgacc-ttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaat 462  Q
    ||||||||||||| || ||||||||||| || |||||||| ||||||||||| |||| ||| ||| |||||    
T  4009927 ggtttgaaccccggcccttgcatatattaatgcattgtccttaccaactgagctaagctcacgaggacaat 4009857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 452
Target Start/End: Complemental strand, 11647243 - 11647198
Alignment:
Q  406 accttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    |||||||||||||| || |||||||| ||||||||||||||||||||    
T  11647243 accttgcatatatt-atgcattgtccttaccaactgagttaagttca 11647198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 460
Target Start/End: Original strand, 11694557 - 11694626
Alignment:
Q  391 gtggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaaca 460  Q
    |||||||||||||| ||| || |||||||| ||||||||||||||||||||||| | || ||| |||||||    
T  11694557 gtggtttgaaccccagacttttcatatatt-atacattgtccataccaactgagctgagctcacgagaaca 11694626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 458
Target Start/End: Complemental strand, 13864404 - 13864339
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagttcatgagaa 458  Q
    ||||||||||||| |||||||||||||| ||  ||||| |||||||||||||||||| ||| |||||    
T  13864404 ggtttgaaccccggaccttgcatatatt-atgtattgttcataccaactgagttaagctcacgagaa 13864339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 408 - 458
Target Start/End: Complemental strand, 17046378 - 17046329
Alignment:
Q  408 cttgcatatatttatacattgtccataccaactgagttaagttcatgagaa 458  Q
    |||||||||||| || ||||||||||||||||||||||||| ||| |||||    
T  17046378 cttgcatatatt-atgcattgtccataccaactgagttaagctcacgagaa 17046329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 447
Target Start/End: Complemental strand, 21316941 - 21316888
Alignment:
Q  393 ggtttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaa 447  Q
    ||||||||||| |||||| |||||||| || |||||||| |||||||||||||||    
T  21316941 ggtttgaacccggacctttcatatatt-atgcattgtccttaccaactgagttaa 21316888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 450
Target Start/End: Original strand, 29874766 - 29874812
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaagtt 450  Q
    ||||||| ||||||||||| ||||||| ||| |||||||||||||||    
T  29874766 cgacctttcatatatttattcattgtctatatcaactgagttaagtt 29874812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 461
Target Start/End: Original strand, 22522802 - 22522870
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    ||||||||||||| |||||||||||||| || |||||||||||||||| ||| |||| ||| ||| ||||    
T  22522802 ggtttgaaccccggaccttgcatatatt-atgcattgtccataccaaccgagctaagctcacgaggacaa 22522870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 448
Target Start/End: Complemental strand, 32858727 - 32858675
Alignment:
Q  395 tttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||| |||||||||||| ||||| |||||||||||||||| ||| ||||    
T  32858727 tttgaaccctgaccttgcatat-tttatgcattgtccataccaacggagctaag 32858675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 461
Target Start/End: Complemental strand, 37932390 - 37932322
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    |||| |||||||| |||||||||||||| || |||||||||||||||||||| |||| ||| ||| ||||    
T  37932390 ggttcgaaccccggaccttgcatatatt-atgcattgtccataccaactgagctaagctcacgaggacaa 37932322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 781923 - 781868
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||| ||||||| |||||||||||| |||||||||||||| || |||||||||||||    
T  781923 ggttcgaaccccagaccttgcatat-tttatacattgtccctatcaactgagttaag 781868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 5614825 - 5614766
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    |||||||||||| |||||| |||||||| || |||| |||||| |||||||||||||||||    
T  5614825 ggtttgaacccccgaccttacatatatt-atgcattatccatatcaactgagttaagttca 5614766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 6489067 - 6489012
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||| ||||||||||||||| || |||||||| ||||||||||| ||||    
T  6489067 ggtttgaaccccagaccttgcatatatt-atgcattgtccctaccaactgagctaag 6489012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 440
Target Start/End: Complemental strand, 7536618 - 7536582
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaact 440  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  7536618 cgaccttgcatatatttatacattgtctatatcaact 7536582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 8314802 - 8314758
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||  ||| |||||||| ||||    
T  8314802 cgaccttgcatatatttatacattgtttatatcaactgagctaag 8314758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 461
Target Start/End: Original strand, 8545003 - 8545058
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    ||||||||||||||| || |||||||| || ||||||||||||| ||| ||||||||    
T  8545003 gaccttgcatatatt-atgcattgtccttatcaactgagttaagctcacgagaacaa 8545058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 16166388 - 16166432
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||| ||||||| ||| |||||||| ||||    
T  16166388 cgaccttgcatatatttatgcattgtctatatcaactgagctaag 16166432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 16488138 - 16488182
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||| |||||||||||||||||||||| ||| |||||||| ||||    
T  16488138 cgacattgcatatatttatacattgtctatatcaactgagctaag 16488182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 18589868 - 18589923
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||| ||||||| |||||||||||||| || |||||| ||||||||||||||||||    
T  18589868 ggtttaaaccccggaccttgcatatatt-atgcattgttcataccaactgagttaag 18589923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 19361625 - 19361581
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||| ||||||||||||||||||| ||| |||||||| ||||    
T  19361625 cgaccttacatatatttatacattgtctatatcaactgagctaag 19361581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 22555278 - 22555223
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    |||||||||||| | ||| ||||||||||||||||||||||||| ||| ||| ||||    
T  22555278 gaccttgcatat-tatatgcattgtccataccaactgagttaagctcacgaggacaa 22555223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 408 - 460
Target Start/End: Original strand, 22665220 - 22665271
Alignment:
Q  408 cttgcatatatttatacattgtccataccaactgagttaagttcatgagaaca 460  Q
    ||||||||| |||||||||||||||||| ||||||| |||| ||| |||||||    
T  22665220 cttgcatat-tttatacattgtccatactaactgagctaagctcacgagaaca 22665271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 28746416 - 28746460
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| |||  ||||||| ||||    
T  28746416 cgaccttgcatatatttatacattgtctatattaactgagctaag 28746460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 39803950 - 39803994
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||| | ||| |||||||| ||||    
T  39803950 cgaccttgcatatatttatacattgcctatatcaactgagctaag 39803994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 40155212 - 40155248
Alignment:
Q  412 catatatttatacattgtccataccaactgagttaag 448  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  40155212 catatttttatacattgtccataccaactgagataag 40155248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 40506900 - 40506944
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||| |||||||||||||||||||||| ||| |||||||| ||||    
T  40506900 cgactttgcatatatttatacattgtctatatcaactgagctaag 40506944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 406 - 466
Target Start/End: Complemental strand, 42505918 - 42505859
Alignment:
Q  406 accttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaatttat 466  Q
    |||||||||||||| || |||||||||||||||||||| |||| | | ||| |||||||||    
T  42505918 accttgcatatatt-atgcattgtccataccaactgagctaagcttacgaggacaatttat 42505859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 440
Target Start/End: Complemental strand, 43396493 - 43396457
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaact 440  Q
    ||||||||||||||||||||||||||| ||| |||||    
T  43396493 cgaccttgcatatatttatacattgtctatatcaact 43396457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 23628809 - 23628753
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    |||||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||    
T  23628809 gaccttgcatatatttatgcattgtctatatcaactgagttcagttcatgagaacaa 23628753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 404 - 450
Target Start/End: Complemental strand, 17976422 - 17976376
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaagtt 450  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||    
T  17976422 cgaccttgcatatatttatacattgtctatatcaactgagttaagtt 17976376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 11949764 - 11949827
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagttcatgag 456  Q
    ||||||||||||| |||||||||||||| || |||||||||||||||||||| |||| |||||||    
T  11949764 ggtttgaaccccggaccttgcatatatt-atgcattgtccataccaactgagctaagctcatgag 11949827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 16431676 - 16431617
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    |||||||||||| |||||||||||| ||||| |||||||||||||||||||| ||||||||    
T  16431676 ggtttgaaccccagaccttgcatat-tttatgcattgtccataccaactgagctaagttca 16431617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 27537807 - 27537745
Alignment:
Q  393 ggtttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaagttcatgag 456  Q
    ||||||||  ||||||||||||||||| || ||||||||||||||| ||||||||| |||||||    
T  27537807 ggtttgaattccgaccttgcatatatt-atgcattgtccataccaattgagttaagctcatgag 27537745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 460
Target Start/End: Complemental strand, 46853909 - 46853855
Alignment:
Q  406 accttgcatatatttatacattgtccataccaactgagttaagttcatgagaaca 460  Q
    |||||||||||  ||||  ||||||||||||||||||||||||||||| ||||||    
T  46853909 accttgcatattattatgtattgtccataccaactgagttaagttcataagaaca 46853855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 226 - 275
Target Start/End: Original strand, 8731662 - 8731711
Alignment:
Q  226 gctactgcttggtgtttttgtggtccggctgtgttctcaaaggtcatgtc 275  Q
    |||||||||||||| |||| |||||| |||||||||||||| ||||||||    
T  8731662 gctactgcttggtgattttctggtcctgctgtgttctcaaatgtcatgtc 8731711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 6610323 - 6610264
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    |||||||||||| ||||||||||||||| ||||||| ||||||| || |||||||||||||    
T  6610323 ggtttgaaccccagaccttgcatatatt-atacattatccatactaagtgagttaagttca 6610264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 9946487 - 9946432
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||| ||||||||||| ||||| |||||||||||||||||||| ||||    
T  9946487 ggtttgaaccccggaccttgcatat-tttatgcattgtccataccaactgagctaag 9946432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 10581992 - 10582036
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||    
T  10581992 cgaccttgcatatatttatacattgtctatatcaactgagctaag 10582036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 11180882 - 11180838
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||    
T  11180882 cgaccttgcatatatttatacattgtctatatcaactgagctaag 11180838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 20383548 - 20383493
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||| |||||||||||||| || |||||||||||||||||||| ||||    
T  20383548 ggtttgaaccccggaccttgcatatatt-atgcattgtccataccaactgagctaag 20383493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 20681170 - 20681126
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||    
T  20681170 cgaccttgcatatatttatacattgtctatatcaactgagctaag 20681126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 39651710 - 39651666
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||    
T  39651710 cgaccttgcatatatttatacattgtctatatcaactgagctaag 39651666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 43034343 - 43034398
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||| | ||||||||||||||| || |||||||||||||||||||||||||    
T  43034343 ggtttgaacctcagaccttgcatatatt-atgcattgtccataccaactgagttaag 43034398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 43117490 - 43117446
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||    
T  43117490 cgaccttgcatatatttatacattgtctatatcaactgagctaag 43117446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 46045894 - 46045938
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||    
T  46045894 cgaccttgcatatatttatacattgtctatatcaactgagctaag 46045938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 459
Target Start/End: Complemental strand, 281651 - 281585
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagttcatgagaac 459  Q
    ||||||||||||| ||||| |||||||| || |||||||||||||||||| | |||||||| ||||||    
T  281651 ggtttgaaccccggacctttcatatatt-atgcattgtccataccaactgcgctaagttcaagagaac 281585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 443
Target Start/End: Complemental strand, 897485 - 897435
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgag 443  Q
    ||||||||||||| ||||| |||||||| |||||||||||||||||||||||    
T  897485 ggtttgaaccccggaccttacatatatt-atacattgtccataccaactgag 897435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 443
Target Start/End: Original strand, 28435249 - 28435299
Alignment:
Q  393 ggtttgaaccccga-ccttgcatatatttatacattgtccataccaactgag 443  Q
    |||||||||||||| ||||||||||||| || ||||||||||||||||||||    
T  28435249 ggtttgaaccccgaaccttgcatatatt-atgcattgtccataccaactgag 28435299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 448
Target Start/End: Complemental strand, 37193308 - 37193254
Alignment:
Q  394 gtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||| |||||||||||||| ||||||||||||||| ||||||| ||||    
T  37193308 gtttgaaccccggaccttgcatatatt-atacattgtccatactaactgagctaag 37193254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 447
Target Start/End: Complemental strand, 43722825 - 43722771
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaa 447  Q
    ||||||||||||| ||||| |||||||| || ||||||||||||||||||||||||    
T  43722825 ggtttgaaccccggaccttacatatatt-atgcattgtccataccaactgagttaa 43722771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 395 - 452
Target Start/End: Original strand, 48226501 - 48226558
Alignment:
Q  395 tttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    |||||||||| |||||||||||| ||||| ||||||||||||||| |||| ||||||||    
T  48226501 tttgaaccccagaccttgcatat-tttatgcattgtccataccaattgagctaagttca 48226558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 405 - 455
Target Start/End: Original strand, 50772604 - 50772653
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaagttcatga 455  Q
    |||||||||||| ||||  ||||||||| ||||||||||||||||||||||    
T  50772604 gaccttgcatat-tttacgcattgtccaaaccaactgagttaagttcatga 50772653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 447
Target Start/End: Complemental strand, 56205006 - 56204953
Alignment:
Q  393 ggtttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaa 447  Q
    |||||||| || ||||||||||||||| || |||||||| |||||||||||||||    
T  56205006 ggtttgaatccggaccttgcatatatt-atgcattgtccttaccaactgagttaa 56204953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 461
Target Start/End: Complemental strand, 7230340 - 7230272
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    ||||||||||||| |||||||||||||| || |||||||| ||||||||||| |||| ||| ||| ||||    
T  7230340 ggtttgaaccccggaccttgcatatatt-atgcattgtccttaccaactgagctaagctcacgaggacaa 7230272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 452
Target Start/End: Complemental strand, 26610217 - 26610184
Alignment:
Q  419 ttatacattgtccataccaactgagttaagttca 452  Q
    ||||||||||||| ||||||||||||||||||||    
T  26610217 ttatacattgtccctaccaactgagttaagttca 26610184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 441
Target Start/End: Original strand, 28361592 - 28361629
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactg 441  Q
    ||||||||||||||||||||||||||| ||| ||||||    
T  28361592 cgaccttgcatatatttatacattgtctatatcaactg 28361629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 447
Target Start/End: Complemental strand, 30380576 - 30380536
Alignment:
Q  406 accttgcatatatttatacattgtccataccaactgagttaa 447  Q
    |||||||||||||| ||||||||||| |||||||||||||||    
T  30380576 accttgcatatatt-atacattgtccttaccaactgagttaa 30380536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 469
Target Start/End: Original strand, 31041366 - 31041442
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaatttatatt 469  Q
    ||||| |||||| ||||||||||||||| |||||||||   |||||| ||||||||| ||| ||| ||||||||||||    
T  31041366 ggtttaaaccccagaccttgcatatatt-atacattgtttctaccaaatgagttaagctcacgaggacaatttatatt 31041442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 459
Target Start/End: Complemental strand, 31352158 - 31352106
Alignment:
Q  406 accttgcatatatttatacattgtccataccaactgagttaagttcatgagaac 459  Q
    ||||||||||| ||||| ||||||||||||||||| || |||||||| ||||||    
T  31352158 accttgcatat-tttatgcattgtccataccaacttagctaagttcacgagaac 31352106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 461
Target Start/End: Complemental strand, 32139400 - 32139331
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    |||| |||||||| |||||||||||||||||  ||||||| || |||||||| |||| ||| ||||||||    
T  32139400 ggttcgaaccccggaccttgcatatatttatgtattgtccctatcaactgagctaagctcacgagaacaa 32139331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 461
Target Start/End: Original strand, 41144404 - 41144461
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    |||||||||||||||||||  |||||| ||| ||||||||||||| ||| ||| ||||    
T  41144404 cgaccttgcatatatttatgaattgtctatatcaactgagttaagctcacgaggacaa 41144461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 51153458 - 51153414
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||| ||| ||| |||||||| ||||    
T  51153458 cgaccttgcatatatttatacatngtctatatcaactgagctaag 51153414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 20799395 - 20799450
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||| |||||||||||||| || |||||||| ||||||||||| ||||    
T  20799395 ggtttgaaccccggaccttgcatatatt-atgcattgtccctaccaactgagctaag 20799450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 21318254 - 21318309
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||  ||||||||||||||| || |||||||| ||||||||||||||||    
T  21318254 ggtttgaaccctagaccttgcatatatt-atgcattgtccctaccaactgagttaag 21318309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 26097750 - 26097794
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||  ||| |||||||| ||||    
T  26097750 cgaccttgcatatatttatacattgtatatatcaactgagctaag 26097794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 29099722 - 29099766
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||| ||||||| ||| |||||||| ||||    
T  29099722 cgaccttgcatatatttatgcattgtctatatcaactgagctaag 29099766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 29908116 - 29908061
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||| ||| |||||||||||||| || |||||||| ||||||||||||||||    
T  29908116 ggtttgaactccggaccttgcatatatt-atgcattgtccttaccaactgagttaag 29908061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 440
Target Start/End: Complemental strand, 34664829 - 34664781
Alignment:
Q  393 ggtttgaaccc-cgaccttgcatatatttatacattgtccataccaact 440  Q
    ||||||||||| ||| ||||||||||||||||||||||| ||| |||||    
T  34664829 ggtttgaacccgcgatcttgcatatatttatacattgtctatatcaact 34664781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 52620613 - 52620569
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||| ||||||| ||| |||||||| ||||    
T  52620613 cgaccttgcatatatttatgcattgtctatatcaactgagctaag 52620569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 404 - 450
Target Start/End: Complemental strand, 3079693 - 3079647
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaagtt 450  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||    
T  3079693 cgaccttgcatatatttatacattgtctatatcaactgagttaagtt 3079647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 7645715 - 7645775
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    ||||||||||| | || ||||||||||| |||||||||||||||||||||||||| |||||    
T  7645715 ggtttgaaccctggactttgcatatattaatacattgtccataccaactgagttaggttca 7645775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 38709682 - 38709638
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||    
T  38709682 cgaccttgcatatatttatacattgtctatatcaactgagttaag 38709638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 394 - 465
Target Start/End: Original strand, 19189747 - 19189817
Alignment:
Q  394 gtttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaattta 465  Q
    ||||||| |||||| ||| ||||||| || |||||| |||||||||||||||||||||| ||||||| ||||    
T  19189747 gtttgaatcccgactttggatatatt-atgcattgttcataccaactgagttaagttcacgagaacatttta 19189817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 447
Target Start/End: Complemental strand, 41859912 - 41859858
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaa 447  Q
    |||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||    
T  41859912 ggtttgaaccccagaccttgcatat-tttatgcattgtccataccaactgagttaa 41859858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 419 - 465
Target Start/End: Complemental strand, 6471300 - 6471254
Alignment:
Q  419 ttatacattgtccataccaactgagttaagttcatgagaacaattta 465  Q
    |||||||||||||||||||||||||||||| | | ||||||||||||    
T  6471300 ttatacattgtccataccaactgagttaagcttacgagaacaattta 6471254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 456
Target Start/End: Original strand, 11817360 - 11817410
Alignment:
Q  406 accttgcatatatttatacattgtccataccaactgagttaagttcatgag 456  Q
    ||||| |||||  |||||||||||||||||||||||||||||| |||||||    
T  11817360 accttacatattattatacattgtccataccaactgagttaagctcatgag 11817410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 458
Target Start/End: Original strand, 31815888 - 31815953
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagttcatgagaa 458  Q
    ||||||||||||| |||||||||||||| || |||||||| |||||||||||||||| ||| |||||    
T  31815888 ggtttgaaccccggaccttgcatatatt-atgcattgtccctaccaactgagttaagctcacgagaa 31815953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 37522690 - 37522628
Alignment:
Q  387 gtttgtggtttgaaccc-cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||| |||| |||||| ||||||||||||||||||||||||||| ||| |||||||| ||||    
T  37522690 gtttggggttcgaacccgcgaccttgcatatatttatacattgtctatatcaactgagctaag 37522628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 405 - 458
Target Start/End: Original strand, 25598576 - 25598628
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaa 458  Q
    ||||||||||||||| || |||||||||||||||||||| |||||||| |||||    
T  25598576 gaccttgcatatatt-atgcattgtccataccaactgagctaagttcacgagaa 25598628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 461
Target Start/End: Complemental strand, 36359374 - 36359306
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    ||||||||||||| |||||||||||||| || ||||||||| | |||| |||||||| ||||||||||||    
T  36359374 ggtttgaaccccggaccttgcatatatt-atgcattgtccaaatcaaccgagttaagctcatgagaacaa 36359306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 2257031 - 2256976
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||| ||||||| ||||||||||||||| || |||||||||||||||||||||||||    
T  2257031 ggttcgaaccccagaccttgcatatatt-atgcattgtccataccaactgagttaag 2256976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 19189845 - 19189900
Alignment:
Q  393 ggtttgaaccccga-ccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||| |||| |||||||||| |||||||||||||||||| ||||||||||||    
T  19189845 ggtttgaactccgaaccttgcatat-tttatacattgtccatactaactgagttaag 19189900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 24592847 - 24592906
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    |||||||||||| ||||||||||||||| || |||||||| ||||||||||| ||||||||    
T  24592847 ggtttgaaccccagaccttgcatatatt-atgcattgtccctaccaactgagctaagttca 24592906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 468
Target Start/End: Original strand, 31837937 - 31838012
Alignment:
Q  393 ggtttgaaccccga-ccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaatttatat 468  Q
    |||||||| ||||| |||| |||||||| ||||||| |||||||||| ||||||||||||| ||| ||||| |||||    
T  31837937 ggtttgaatcccgaaccttacatatatt-atacattatccataccaattgagttaagttcacgaggacaatatatat 31838012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 44694748 - 44694689
Alignment:
Q  393 ggtttgaaccccga-ccttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    |||||||||||||| ||||||||||||| || ||||||| ||| |||||||||||||||||    
T  44694748 ggtttgaaccccgagccttgcatatatt-atgcattgtctatatcaactgagttaagttca 44694689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 45474698 - 45474654
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||    
T  45474698 cgaccttgcatatatttatacattgtctatatcaactgagctaag 45474654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 460
Target Start/End: Original strand, 7302143 - 7302209
Alignment:
Q  393 ggtttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaaca 460  Q
    |||| |||||| |||||||||||| ||||| |||||||| || |||||||| |||||||| |||||||    
T  7302143 ggttcgaacccagaccttgcatat-tttatgcattgtccctatcaactgagctaagttcacgagaaca 7302209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 440
Target Start/End: Original strand, 9581288 - 9581334
Alignment:
Q  393 ggtttgaaccccgaccttgcatatatttatacattgtccataccaact 440  Q
    ||||||||||| ||||||||||||| |||| |||||||||||||||||    
T  9581288 ggtttgaacccggaccttgcatata-ttattcattgtccataccaact 9581334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 398 - 452
Target Start/End: Complemental strand, 13196755 - 13196701
Alignment:
Q  398 gaaccccga-ccttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    ||||||||| ||||||||||||| || |||||| ||||||||||||||||||||||    
T  13196755 gaaccccgaaccttgcatatatt-atgcattgttcataccaactgagttaagttca 13196701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 448
Target Start/End: Complemental strand, 34977251 - 34977209
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||| || |||||||||||||||||||||||||    
T  34977251 gaccttgcatatatt-atgcattgtccataccaactgagttaag 34977209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 405 - 447
Target Start/End: Original strand, 6723091 - 6723132
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaa 447  Q
    ||||||||||||||| |||||||||||||| ||||||||||||    
T  6723091 gaccttgcatatatt-atacattgtccatatcaactgagttaa 6723132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 450
Target Start/End: Original strand, 8781651 - 8781708
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagtt 450  Q
    ||||||||||||| |||||||||| ||| || |||||||||||||||||||| ||||||    
T  8781651 ggtttgaaccccggaccttgcatacatt-atgcattgtccataccaactgagctaagtt 8781708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 458
Target Start/End: Original strand, 20565076 - 20565141
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagttcatgagaa 458  Q
    ||||||||||||| |||||||||||||| || |||||||| ||||||||||| |||| ||| |||||    
T  20565076 ggtttgaaccccggaccttgcatatatt-atgcattgtccctaccaactgagctaagctcacgagaa 20565141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 452
Target Start/End: Complemental strand, 33966367 - 33966322
Alignment:
Q  406 accttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    |||||||||||||| || |||||| ||||||||||||||||||||||    
T  33966367 accttgcatatatt-atgcattgttcataccaactgagttaagttca 33966322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 442
Target Start/End: Complemental strand, 34912628 - 34912590
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactga 442  Q
    ||||||||||||||||||||||||||| ||| |||||||    
T  34912628 cgaccttgcatatatttatacattgtctatatcaactga 34912590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 448
Target Start/End: Complemental strand, 38879127 - 38879069
Alignment:
Q  391 gtggtttgaaccc-cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||| |||||| ||||||||||||||||||||||||||| ||| |||| ||| ||||    
T  38879127 gtggttcgaacccgcgaccttgcatatatttatacattgtcaatatcaaccgagctaag 38879069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 398 - 440
Target Start/End: Original strand, 41204507 - 41204549
Alignment:
Q  398 gaaccccgaccttgcatatatttatacattgtccataccaact 440  Q
    ||||||||| ||||||||| ||||| |||||||||||||||||    
T  41204507 gaaccccgagcttgcatatttttatgcattgtccataccaact 41204549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 463
Target Start/End: Complemental strand, 40257230 - 40257174
Alignment:
Q  406 accttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaatt 463  Q
    |||||| ||||||| |||||||||||||||||| ||||||||| ||| ||| ||||||    
T  40257230 accttgaatatatt-atacattgtccataccaattgagttaagctcacgaggacaatt 40257174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 461
Target Start/End: Original strand, 41763879 - 41763947
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    ||||||||||||| ||| |||||||| | || |||||||||||||||||||| |||||||| ||| ||||    
T  41763879 ggtttgaaccccggaccgtgcatatact-atgcattgtccataccaactgagctaagttcacgaggacaa 41763947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 3243393 - 3243437
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| ||| |||| ||||    
T  3243393 cgaccttgcatatatttatacattgtctatatcaattgagctaag 3243437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 9547410 - 9547465
Alignment:
Q  393 ggtttgaaccccga-ccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||| | ||||||||||||| || ||||||||||| |||||||||||||    
T  9547410 ggtttgaaccccaaaccttgcatatatt-atgcattgtccatatcaactgagttaag 9547465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 17032910 - 17032954
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| || ||||| ||||    
T  17032910 cgaccttgcatatatttatacattgtctatatcagctgagctaag 17032954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 460
Target Start/End: Complemental strand, 19976214 - 19976146
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagttcatgagaaca 460  Q
    |||| |||||||| |||||||||||  |||| |||||||||||||||||||| |||  ||| |||||||    
T  19976214 ggttcgaaccccggaccttgcatattattatgcattgtccataccaactgagctaaactcacgagaaca 19976146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 30089109 - 30089050
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    ||||||||||||| |||||| ||||||| || |||||||| ||||||||||| ||||||||    
T  30089109 ggtttgaaccccggaccttgtatatatt-atgcattgtccctaccaactgagctaagttca 30089050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 30125713 - 30125654
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    ||||||||||||| |||||| ||||||| || |||||||| ||||||||||| ||||||||    
T  30125713 ggtttgaaccccggaccttgtatatatt-atgcattgtccctaccaactgagctaagttca 30125654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 32063588 - 32063644
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||| | |||||||||||| ||||| |||| ||||||||||||||| ||||    
T  32063588 ggtttgaacctctgaccttgcatatttttatgcattatccataccaactgagctaag 32063644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 35423763 - 35423719
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| |||  ||||||| ||||    
T  35423763 cgaccttgcatatatttatacattgtctatattaactgagataag 35423719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 35456821 - 35456877
Alignment:
Q  393 ggtttgaaccccga-ccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||||| ||||||||||||| || |||||| | ||||||||||| ||||    
T  35456821 ggtttgaaccccgaaccttgcatatattaatgcattgttcttaccaactgagctaag 35456877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 398 - 454
Target Start/End: Original strand, 40099390 - 40099445
Alignment:
Q  398 gaaccccgaccttgcatatatttatacattgtccataccaactgagttaagttcatg 454  Q
    ||||| |||||||||||||||| || |||||||| ||||||||||| |||| |||||    
T  40099390 gaacctcgaccttgcatatatt-atgcattgtccttaccaactgagctaagctcatg 40099445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 161201 - 161146
Alignment:
Q  393 ggtttgaaccccga-ccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||    
T  161201 ggtttgaaccccgaaccttgcatat-tttatgcattgtccataccaactgagttaag 161146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 29976290 - 29976246
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||    
T  29976290 cgaccttgcatatatttatacattgtctatatcaactgagttaag 29976246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 393 - 450
Target Start/End: Original strand, 2726418 - 2726475
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagtt 450  Q
    |||| |||||||| |||||||||||||| || |||||||||||||||||||||||||||    
T  2726418 ggttcgaaccccggaccttgcatatatt-atgcattgtccataccaactgagttaagtt 2726475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 448
Target Start/End: Original strand, 5414663 - 5414705
Alignment:
Q  406 accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||| ||| |||||||||||||    
T  5414663 accttgcatatatttatacattgtctatatcaactgagttaag 5414705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 448
Target Start/End: Complemental strand, 17505468 - 17505418
Alignment:
Q  398 gaaccccgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||| ||||||||||||||||||||||||||| ||| |||||||| ||||    
T  17505468 gaaccgcgaccttgcatatatttatacattgtctatatcaactgagctaag 17505418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 394 - 448
Target Start/End: Original strand, 26320566 - 26320619
Alignment:
Q  394 gtttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||| |||||||||||| ||||| |||||||||||||||||||| ||||    
T  26320566 gtttgaacccggaccttgcatat-tttatgcattgtccataccaactgagctaag 26320619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 395 - 475
Target Start/End: Original strand, 3863336 - 3863417
Alignment:
Q  395 tttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaatttatatttatcta 475  Q
    |||||||||| ||| ||||||||||| || |||||||| |||||||||||||||| ||| ||  ||||||| | ||||||||    
T  3863336 tttgaaccccagacgttgcatatattaatgcattgtccttaccaactgagttaagctcacgaagacaatttctttttatcta 3863417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 408 - 460
Target Start/End: Complemental strand, 2108769 - 2108718
Alignment:
Q  408 cttgcatatatttatacattgtccataccaactgagttaagttcatgagaaca 460  Q
    ||||||||| ||||| ||||||||||||||||||||||||| ||| |||||||    
T  2108769 cttgcatat-tttatgcattgtccataccaactgagttaagctcacgagaaca 2108718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 8629697 - 8629752
Alignment:
Q  393 ggtttgaaccccga-ccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||||| ||||||||||||| || ||||||||||||||| |||||||||    
T  8629697 ggtttgaaccccgaaccttgcatatatt-atgcattgtccataccaattgagttaag 8629752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 441
Target Start/End: Original strand, 11456377 - 11456424
Alignment:
Q  393 ggtttgaaccccgaccttgcatatatttatacattgtccataccaactg 441  Q
    |||||||||||||||||| |||||| |||| ||||||||||||||||||    
T  11456377 ggtttgaaccccgaccttacatata-ttatgcattgtccataccaactg 11456424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 460
Target Start/End: Original strand, 14772983 - 14773050
Alignment:
Q  393 ggtttgaa-ccccgaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaaca 460  Q
    |||||||| ||||||||||| ||||||| || |||||| |||||||||||||||||||| || ||||||    
T  14772983 ggtttgaatccccgaccttggatatatt-atgcattgttcataccaactgagttaagtttataagaaca 14773050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 19988870 - 19988826
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||    
T  19988870 cgaccttgcatatatttatacattgtctatatcaactgagctaag 19988826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 20744198 - 20744143
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||| ||||||||||||||| || |||||||||||||||||||| ||||    
T  20744198 ggtttgaaccccagaccttgcatatatt-atgcattgtccataccaactgagctaag 20744143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 390 - 452
Target Start/End: Complemental strand, 3358454 - 3358392
Alignment:
Q  390 tgtggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    ||||||||||||| || || ||||||||||| || ||||||||| |||||||||||||||||||    
T  3358454 tgtggtttgaacctcggactttgcatatatt-atgcattgtccaaaccaactgagttaagttca 3358392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 443
Target Start/End: Original strand, 6018672 - 6018711
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgag 443  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  6018672 cgaccttgcatatatttatacattgtctatatcaactgag 6018711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 443
Target Start/End: Complemental strand, 7541082 - 7541043
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgag 443  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  7541082 cgaccttgcatatatttatacattgtctatatcaactgag 7541043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 447
Target Start/End: Complemental strand, 8569769 - 8569715
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaa 447  Q
    ||||||||||||| |||||||||||||| || ||||||||||||||| ||||||||    
T  8569769 ggtttgaaccccggaccttgcatatatt-atgcattgtccataccaattgagttaa 8569715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 463
Target Start/End: Complemental strand, 2546240 - 2546167
Alignment:
Q  393 ggtttgaaccccg-accttgcatatattt--atacattgtccataccaactgagttaagttcatgagaacaatt 463  Q
    ||||||||||||| ||||||||||||||   || |||||||||||| | |||||||||| ||| ||||||||||    
T  2546240 ggtttgaaccccgtaccttgcatatattatgatgcattgtccatacaatctgagttaagctcacgagaacaatt 2546167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 450
Target Start/End: Original strand, 4455597 - 4455654
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaagtt 450  Q
    |||||||||||| ||||||||||||||| || | |||||||||||||||||| ||||||    
T  4455597 ggtttgaaccccagaccttgcatatatt-atgccttgtccataccaactgagctaagtt 4455654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 448
Target Start/End: Original strand, 6160683 - 6160724
Alignment:
Q  406 accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||||| |||||||||||||||||||| |||||||    
T  6160683 accttgcatatatt-atacattgtccataccaactaagttaag 6160724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 448
Target Start/End: Original strand, 28757039 - 28757080
Alignment:
Q  406 accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||||| ||||||||||| ||||||||||||||||    
T  28757039 accttgcatatatt-atacattgtccttaccaactgagttaag 28757080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 448
Target Start/End: Complemental strand, 17382129 - 17382089
Alignment:
Q  407 ccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||| ||||||||||||||||||||||| ||||    
T  17382129 ccttgcatatatt-atacattgtccataccaactgagctaag 17382089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 409 - 461
Target Start/End: Original strand, 4922426 - 4922477
Alignment:
Q  409 ttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    ||||||||||| ||||||| ||| |||||||| ||||||||||||||| ||||    
T  4922426 ttgcatatatt-atacattatccctaccaactaagttaagttcatgaggacaa 4922477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 6833526 - 6833470
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    |||||||||||||||||| ||||||| ||| |||||||| |||| ||| ||| ||||    
T  6833526 gaccttgcatatatttatgcattgtctatatcaactgagctaagctcacgagtacaa 6833470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 10945685 - 10945641
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||| ||||||| ||| |||||||| ||||    
T  10945685 cgaccttgcatatatttatgcattgtctatatcaactgaggtaag 10945641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 24349604 - 24349549
Alignment:
Q  393 ggtttgaaccccga-ccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||||| ||||||| ||||| ||||||||| ||||||||| ||||||||    
T  24349604 ggtttgaaccccgaaccttgcaaatatt-atacattgtgcataccaaccgagttaag 24349549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 26548311 - 26548256
Alignment:
Q  393 ggtttgaaccccga-ccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||||| ||||||||||||| ||||||||| ||||| || |||||||||    
T  26548311 ggtttgaaccccgaaccttgcatatatt-atacattgttcatactaattgagttaag 26548256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 31971589 - 31971534
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||| || |||||||||||||| || |||||||| ||||||||||||||||    
T  31971589 ggtttgaacctcggaccttgcatatatt-atgcattgtccttaccaactgagttaag 31971534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 34207102 - 34207146
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||| |||||||||||| |||||| ||| |||||||||||||    
T  34207102 cgaccttacatatatttatagattgtctatatcaactgagttaag 34207146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 25441501 - 25441560
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    |||||||||||| ||||||||||||||| || |||||||||||||||||||| ||||||||    
T  25441501 ggtttgaaccccagaccttgcatatatt-atgcattgtccataccaactgagctaagttca 25441560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 38130960 - 38131015
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||| |||||||||||||| || |||||||||||||||||||||||||    
T  38130960 ggtttgaaccccggaccttgcatatatt-atgcattgtccataccaactgagttaag 38131015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 38361727 - 38361683
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||    
T  38361727 cgaccttgcatatatttatacattgtcaatatcaactgagttaag 38361683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 44762823 - 44762867
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||    
T  44762823 cgaccttgcatatatttatacattgtctatatcaactgagttaag 44762867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 463
Target Start/End: Original strand, 2186428 - 2186498
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaatt 463  Q
    |||||||||||| |||||| |||||||| ||  |||||||||||||||||||||||||||| ||| ||||||    
T  2186428 ggtttgaaccccagaccttacatatatt-atgtattgtccataccaactgagttaagttcacgagcacaatt 2186498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 393 - 443
Target Start/End: Original strand, 54203832 - 54203883
Alignment:
Q  393 ggtttgaaccc-cgaccttgcatatatttatacattgtccataccaactgag 443  Q
    ||||||||||| ||||||||||||||||||||||||||| ||| ||||||||    
T  54203832 ggtttgaacccgcgaccttgcatatatttatacattgtctatatcaactgag 54203883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 405 - 447
Target Start/End: Original strand, 27397626 - 27397667
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaa 447  Q
    ||||||||||||||| |||||||||||||||||||||||||||    
T  27397626 gaccttgcatatatt-atacattgtccataccaactgagttaa 27397667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 460
Target Start/End: Complemental strand, 53222004 - 53221951
Alignment:
Q  406 accttgcatatatttatacattgtccataccaactgagttaagttcatgagaaca 460  Q
    ||||| |||||||| ||||||||||| || |||||||||||||||||||||||||    
T  53222004 accttacatatatt-atacattgtccttatcaactgagttaagttcatgagaaca 53221951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 411 - 460
Target Start/End: Complemental strand, 31272725 - 31272676
Alignment:
Q  411 gcatatatttatacattgtccataccaactgagttaagttcatgagaaca 460  Q
    |||||| ||||| |||| |||||||||||||||||||| |||||||||||    
T  31272725 gcatatttttatgcattatccataccaactgagttaagctcatgagaaca 31272676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 409 - 474
Target Start/End: Original strand, 34326001 - 34326065
Alignment:
Q  409 ttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaatttatatttatct 474  Q
    ||||||||||| || ||||||||||||||||||| ||||||||| ||||||||  ||||| |||||    
T  34326001 ttgcatatatt-atgcattgtccataccaactgaattaagttcacgagaacaaaatatatatatct 34326065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 12101561 - 12101605
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||| ||||||| ||| |||||||||||||    
T  12101561 cgaccttgcatatatttatgcattgtctatatcaactgagttaag 12101605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 13337077 - 13337033
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||    
T  13337077 cgaccttgcatatatttatacattgtctatatcaactgagctaag 13337033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 25340925 - 25340980
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||| ||||||||||| ||||| |||||||||||||||||||| ||||    
T  25340925 ggtttgaaccccggaccttgcatat-tttatgcattgtccataccaactgagctaag 25340980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 29631246 - 29631183
Alignment:
Q  393 ggtttgaaccccga-ccttgcatatatttatacattgtccataccaactgagttaagttcatgag 456  Q
    |||||||| ||||| ||||||||||||| || |||||||||||||||||||| |||| |||||||    
T  29631246 ggtttgaatcccgaaccttgcatatatt-atgcattgtccataccaactgagctaagctcatgag 29631183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 49082710 - 49082765
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||| |||||||||||||  |||||||||||||||||||||| |||||    
T  49082710 ggtttgaaccccggaccttgcatatatc-atacattgtccataccaactgatttaag 49082765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 4216401 - 4216459
Alignment:
Q  393 ggtttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    |||| |||||||||||||||||||| |||| |||||||| || |||||||| ||||||||    
T  4216401 ggttcgaaccccgaccttgcatata-ttatgcattgtccttatcaactgagctaagttca 4216459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 448
Target Start/End: Complemental strand, 19468498 - 19468456
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||| || |||||||||||||||||||||||||    
T  19468498 gaccttgcatatatt-atgcattgtccataccaactgagttaag 19468456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 452
Target Start/End: Complemental strand, 27532882 - 27532835
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    ||||||||||||  ||||  ||||||||||||||||||||||||||||    
T  27532882 gaccttgcatattattatgtattgtccataccaactgagttaagttca 27532835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 448
Target Start/End: Complemental strand, 33771737 - 33771695
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||    
T  33771737 gaccttgcatatatt-atacattgtccttaccaactgagttaag 33771695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 460
Target Start/End: Complemental strand, 49710767 - 49710713
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaaca 460  Q
    |||||||||||| ||||| ||||||  ||||||||||||||||| |||||||||||    
T  49710767 gaccttgcatat-tttatgcattgttaataccaactgagttaagctcatgagaaca 49710713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 448
Target Start/End: Original strand, 49975807 - 49975861
Alignment:
Q  394 gtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||| ||||||||||||||| || ||||||||||| |||||||||||||    
T  49975807 gtttgaaccccagaccttgcatatatt-atgcattgtccataacaactgagttaag 49975861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 394 - 459
Target Start/End: Complemental strand, 2078299 - 2078234
Alignment:
Q  394 gtttgaaccccga-ccttgcatatatttatacattgtccataccaactgagttaagttcatgagaac 459  Q
    ||||||||||| | ||||||||||||| || |||||||  |||||||||||||||||||| ||||||    
T  2078299 gtttgaaccccaaaccttgcatatatt-atgcattgtctctaccaactgagttaagttcacgagaac 2078234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 402 - 452
Target Start/End: Complemental strand, 2096468 - 2096420
Alignment:
Q  402 cccgaccttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    |||||||||||||||| ||||||||||||| ||||||||| ||||||||||    
T  2096468 cccgaccttgcatata-ttatacattgtcc-taccaactgtgttaagttca 2096420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 391 - 461
Target Start/End: Original strand, 3176973 - 3177042
Alignment:
Q  391 gtggtttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    ||||||| ||||| ||||||||||||| |||| |||||| | |||||||||||||||| | | ||||||||    
T  3176973 gtggtttaaacccagaccttgcatata-ttatgcattgttcctaccaactgagttaagcttacgagaacaa 3177042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 461
Target Start/End: Complemental strand, 7738726 - 7738661
Alignment:
Q  396 ttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    |||||||||| ||||||||||| ||||| |||||||| |||||||||||||||| ||| ||| ||||    
T  7738726 ttgaaccccggaccttgcatat-tttatgcattgtccctaccaactgagttaagctcacgaggacaa 7738661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 448
Target Start/End: Original strand, 12043111 - 12043153
Alignment:
Q  406 accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||||| || |||||||| ||||||||||||||||    
T  12043111 accttgcatatattaatgcattgtccttaccaactgagttaag 12043153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 405 - 459
Target Start/End: Original strand, 32909315 - 32909368
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaac 459  Q
    |||||||||||| ||||| |||||||||||| |||||||||||| ||| ||||||    
T  32909315 gaccttgcatat-tttatgcattgtccatactaactgagttaagctcacgagaac 32909368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 462
Target Start/End: Complemental strand, 5186892 - 5186824
Alignment:
Q  393 ggtttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaat 462  Q
    ||||||||||| ||||||||||||| |||  |||||||| ||||| |||||||||| ||| ||| |||||    
T  5186892 ggtttgaacccagaccttgcatata-ttaagcattgtccctaccagctgagttaagctcacgaggacaat 5186824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 411 - 448
Target Start/End: Original strand, 5293946 - 5293983
Alignment:
Q  411 gcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  5293946 gcatatatttatgcattgtccgtaccaactgagttaag 5293983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 448
Target Start/End: Complemental strand, 8127524 - 8127468
Alignment:
Q  392 tggtttgaaccccga-ccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||| | |||||||||| ||||| |||||||| ||||||||||||||||    
T  8127524 tggtttgaaccccaaaccttgcatat-tttatgcattgtccttaccaactgagttaag 8127468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 408 - 461
Target Start/End: Complemental strand, 14827569 - 14827517
Alignment:
Q  408 cttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    ||||||||| ||||| |||||||||||||||||||| |||| ||| ||||||||    
T  14827569 cttgcatat-tttatgcattgtccataccaactgagctaagctcacgagaacaa 14827517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 396 - 448
Target Start/End: Complemental strand, 25874188 - 25874135
Alignment:
Q  396 ttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||| ||||| |||||  |||| |||||||||||||||||||||||||    
T  25874188 ttgaaccccggaccttacatattattatgcattgtccataccaactgagttaag 25874135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 448
Target Start/End: Original strand, 43796864 - 43796893
Alignment:
Q  419 ttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||||||    
T  43796864 ttatacattgtccataccaactgagttaag 43796893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 448
Target Start/End: Original strand, 51250249 - 51250289
Alignment:
Q  407 ccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||| ||||||||||| ||||||||||||||||    
T  51250249 ccttgcatatatt-atacattgtccttaccaactgagttaag 51250289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 447
Target Start/End: Original strand, 334848 - 334903
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacatt-gtccataccaactgagttaa 447  Q
    ||||||||||||| ||||||||||| ||||| |||| ||||||||||||||||||||    
T  334848 ggtttgaaccccggaccttgcatat-tttatgcatttgtccataccaactgagttaa 334903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 7464492 - 7464547
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||| ||||| |||||||| || |||||||| ||||||||||||||||    
T  7464492 ggtttgaaccccggaccttacatatatt-atgcattgtccctaccaactgagttaag 7464547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 10922309 - 10922364
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||| | |||||||||||| || |||||||| ||||||||||||||||    
T  10922309 ggtttgaaccccggatcttgcatatatt-atgcattgtccctaccaactgagttaag 10922364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 15496565 - 15496609
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||| ||||||||||||||| ||| |||||||| ||||    
T  15496565 cgaccttgcatgtatttatacattgtctatatcaactgagctaag 15496609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 21160112 - 21160053
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    |||||||||||| |||||| |||||||| || |||| |||||| |||||||||||||||||    
T  21160112 ggtttgaacccccgaccttacatatatt-atgcattatccatatcaactgagttaagttca 21160053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 406 - 454
Target Start/End: Original strand, 21914086 - 21914133
Alignment:
Q  406 accttgcatatatttatacattgtccataccaactgagttaagttcatg 454  Q
    |||||||||||||| || |||||||| |||||||||||||||| |||||    
T  21914086 accttgcatatatt-atgcattgtccttaccaactgagttaagctcatg 21914133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 28244105 - 28244160
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||| |||||||| ||||||||||| ||||| |||||| ||||||||||||||||||    
T  28244105 ggttcgaaccccggaccttgcatat-tttatgcattgttcataccaactgagttaag 28244160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 408 - 448
Target Start/End: Original strand, 36987841 - 36987881
Alignment:
Q  408 cttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||| ||| |||||||| ||||    
T  36987841 cttgcatatatttatacattgtctatatcaactgagctaag 36987881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 408 - 448
Target Start/End: Original strand, 37013280 - 37013320
Alignment:
Q  408 cttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||| ||| |||||||| ||||    
T  37013280 cttgcatatatttatacattgtctatatcaactgagctaag 37013320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 453
Target Start/End: Complemental strand, 38894084 - 38894037
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaagttcat 453  Q
    |||||||||||| |||||||||||| |||| |||||||| |||||||||    
T  38894084 gaccttgcatat-tttatacattgttcatatcaactgagctaagttcat 38894037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 39721236 - 39721192
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||| ||||||||||||||||||| ||| |||||||| ||||    
T  39721236 cgaccttacatatatttatacattgtctatatcaactgagctaag 39721192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 44579696 - 44579641
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||| |||||||| ||||||||||| ||||| |||||||||||||||||||| ||||    
T  44579696 ggttcgaaccccggaccttgcatat-tttatgcattgtccataccaactgagctaag 44579641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 45432008 - 45431953
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||| |||||||||||||| || |||||||| ||||||||||| ||||    
T  45432008 ggtttgaaccccggaccttgcatatatt-atgcattgtccctaccaactgagctaag 45431953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 461
Target Start/End: Original strand, 46088813 - 46088869
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    |||||||||||||||||| ||||||| ||| ||||||||| ||| ||| ||| ||||    
T  46088813 gaccttgcatatatttatgcattgtctatatcaactgagtcaagctcacgaggacaa 46088869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 46090216 - 46090260
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||| ||||||| ||| |||||||| ||||    
T  46090216 cgaccttgcatatatttatgcattgtctatatcaactgagctaag 46090260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 47670582 - 47670626
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||| ||||||||||||||||||| ||| |||||||| ||||    
T  47670582 cgacctttcatatatttatacattgtctatatcaactgagctaag 47670626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 48849764 - 48849818
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||| |||||||||||||| || ||||||| |||||||||||||||||    
T  48849764 ggtttgaaccccggaccttgcatatatt-atgcattgtc-ataccaactgagttaag 48849818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 440
Target Start/End: Original strand, 51047170 - 51047218
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaact 440  Q
    ||||||||||||| ||||| |||||  ||||||||||||||||||||||    
T  51047170 ggtttgaaccccggaccttacatattattatacattgtccataccaact 51047218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 408 - 448
Target Start/End: Original strand, 51882217 - 51882256
Alignment:
Q  408 cttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  51882217 cttgcatatatt-atgcattgtccataccaactgagttaag 51882256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 394 - 459
Target Start/End: Original strand, 3509942 - 3510008
Alignment:
Q  394 gtttgaacccc--gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaac 459  Q
    |||||||||||  ||||||||||||||| || |||||||||||||||||||| |||||||| ||||||    
T  3509942 gtttgaacccccggaccttgcatatatt-atgcattgtccataccaactgagctaagttcacgagaac 3510008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 9265837 - 9265896
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    |||||||| ||| |||||||||| |||| ||||||||||||||||||||||||||||||||    
T  9265837 ggtttgaatcccagaccttgcatgtatt-atacattgtccataccaactgagttaagttca 9265896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 460
Target Start/End: Original strand, 29450996 - 29451050
Alignment:
Q  406 accttgcatatatttatacattgtccataccaactgagttaagttcatgagaaca 460  Q
    |||||||||||  |||| ||||||||||||||||||||||||| ||| |||||||    
T  29450996 accttgcatattattatgcattgtccataccaactgagttaagctcacgagaaca 29451050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 461
Target Start/End: Original strand, 31061907 - 31061972
Alignment:
Q  395 tttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    ||||||||  ||||||||||||| | || |||||||| |||||||||||||||||||||||| ||||    
T  31061907 tttgaacctggaccttgcatataat-atgcattgtccttaccaactgagttaagttcatgaggacaa 31061972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 395 - 448
Target Start/End: Complemental strand, 32561031 - 32560978
Alignment:
Q  395 tttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||| |||||||||||||| ||||||||||||||||||||||| ||||    
T  32561031 tttgaaccccggaccttgcatatatt-atacattgtccataccaactgagataag 32560978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 393 - 461
Target Start/End: Original strand, 6423762 - 6423831
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    ||||||||||||| |||||||||||||  || |||||| |||||||||||||||||| ||| ||| ||||    
T  6423762 ggtttgaaccccggaccttgcatatataaatgcattgttcataccaactgagttaagctcacgaggacaa 6423831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 2994818 - 2994763
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||| |||||||||||||| ||||||||||||||| ||||||| ||||    
T  2994818 ggtttgaaccccggaccttgcatatatt-atacattgtccatacgaactgagataag 2994763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 17366446 - 17366490
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||    
T  17366446 cgaccttgcatatatttatacattgtctatatcaactgagctaag 17366490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 24473650 - 24473694
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||||||||||||| |||| ||| |||||||||||||    
T  24473650 cgaccttgcatatatttatacaatgtctatatcaactgagttaag 24473694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 26803452 - 26803511
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    ||||||||||||| || ||||||||||| || |||||||||||||||||||| ||||||||    
T  26803452 ggtttgaaccccggactttgcatatatt-atgcattgtccataccaactgagctaagttca 26803511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 34766920 - 34766865
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||| ||||||| |||||||||| |||| ||||||||||||||||||||||||||||    
T  34766920 ggttcgaaccccagaccttgcatgtatt-atacattgtccataccaactgagttaag 34766865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 49571181 - 49571137
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||    
T  49571181 cgaccttgcatatatttatacattgtctatatcaactgagctaag 49571137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 448
Target Start/End: Original strand, 16580813 - 16580855
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||| |||||||||||||||||||||| |||||    
T  16580813 gaccttgcatatatt-atacattgtccataccaactgaattaag 16580855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 459
Target Start/End: Complemental strand, 29800593 - 29800527
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaac 459  Q
    |||||||||||| |||||||||||| ||||| |||| ||| |||||||||||||||| ||| ||||||    
T  29800593 ggtttgaacccccgaccttgcatat-tttatgcattatccttaccaactgagttaagctcacgagaac 29800527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 443
Target Start/End: Original strand, 34521191 - 34521241
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgag 443  Q
    ||||||||||||| |||||||||||||| || ||||||||||||||||||||    
T  34521191 ggtttgaaccccggaccttgcatatatt-atgcattgtccataccaactgag 34521241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 404 - 443
Target Start/End: Original strand, 39879238 - 39879277
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgag 443  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  39879238 cgaccttgcatatatttatacattgtctatatcaactgag 39879277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 448
Target Start/End: Original strand, 48646727 - 48646782
Alignment:
Q  394 gtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||| |||||||||||  |||| |||||||||||| ||||||||||||    
T  48646727 gtttgaaccccggaccttgcatattattatgcattgtccatacaaactgagttaag 48646782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 463
Target Start/End: Complemental strand, 52494117 - 52494046
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaatt 463  Q
    |||||||||| || ||||||||||| ||||| |||||||||||| ||||||| ||||| || ||| ||||||    
T  52494117 ggtttgaacctcggaccttgcatatttttatgcattgtccatactaactgagctaagtccacgaggacaatt 52494046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 462
Target Start/End: Complemental strand, 3777778 - 3777709
Alignment:
Q  393 ggtttgaaccccga-ccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaat 462  Q
    |||||||||| ||| ||||| ||||||| ||||||| |||||| ||||||||||||| ||| |||||||||    
T  3777778 ggtttgaacctcgaaccttgtatatatt-atacattatccatatcaactgagttaagctcacgagaacaat 3777709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 406 - 452
Target Start/End: Original strand, 7454593 - 7454638
Alignment:
Q  406 accttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    |||||||||||||| |||||||||| ||||||| |||||||||||||    
T  7454593 accttgcatatatt-atacattgtcgataccaattgagttaagttca 7454638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 405 - 447
Target Start/End: Complemental strand, 7803452 - 7803411
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaa 447  Q
    ||||||||||||||| ||||||||||||||| |||||||||||    
T  7803452 gaccttgcatatatt-atacattgtccatacaaactgagttaa 7803411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 442
Target Start/End: Complemental strand, 25533033 - 25532984
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactga 442  Q
    ||||||||||||| |||||||||||||| || |||||||||||||||||||    
T  25533033 ggtttgaaccccggaccttgcatatatt-atgcattgtccataccaactga 25532984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 455
Target Start/End: Original strand, 30548093 - 30548154
Alignment:
Q  393 ggtttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaagttcatga 455  Q
    |||||||||||  |||||||||||| |||| |||||||| |||||||| ||||||| ||||||    
T  30548093 ggtttgaacccgaaccttgcatata-ttatgcattgtccttaccaactaagttaagctcatga 30548154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 450
Target Start/End: Complemental strand, 33932894 - 33932848
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaagtt 450  Q
    ||||||||||||||||||||||||||| ||| ||| |||| ||||||    
T  33932894 cgaccttgcatatatttatacattgtctatatcaattgagctaagtt 33932848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 461
Target Start/End: Original strand, 34083637 - 34083709
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatt---tatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    |||| |||||||| ||||| ||||||||   ||| |||||||| |||||||||||||||| ||||||||||||    
T  34083637 ggttcgaaccccggaccttacatatattatatatgcattgtccctaccaactgagttaagctcatgagaacaa 34083709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 450
Target Start/End: Original strand, 37824150 - 37824196
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaagtt 450  Q
    |||||||||||||||||||||||| || ||| |||||||| ||||||    
T  37824150 cgaccttgcatatatttatacattttctatatcaactgagctaagtt 37824196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 404 - 450
Target Start/End: Original strand, 39729304 - 39729350
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaagtt 450  Q
    |||||||||||| |||||||||||||| ||| |||||||| ||||||    
T  39729304 cgaccttgcatagatttatacattgtctatatcaactgagctaagtt 39729350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 419 - 460
Target Start/End: Original strand, 2636782 - 2636823
Alignment:
Q  419 ttatacattgtccataccaactgagttaagttcatgagaaca 460  Q
    |||| ||||||||||||||||||||||||| ||| |||||||    
T  2636782 ttatgcattgtccataccaactgagttaagctcacgagaaca 2636823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 461
Target Start/End: Original strand, 24752648 - 24752717
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    |||| ||||||| ||||||||||||  |||| |||||||||||||||||||| |||| ||| ||| ||||    
T  24752648 ggttcgaaccccagaccttgcatattattatgcattgtccataccaactgagctaagctcacgaggacaa 24752717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 462
Target Start/End: Original strand, 28832185 - 28832241
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaat 462  Q
    ||||||||||||||| || |||||| |||||||||||||||||| |||  ||||||||    
T  28832185 gaccttgcatatatt-atgcattgttcataccaactgagttaagctcacaagaacaat 28832241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 404 - 448
Target Start/End: Complemental strand, 34078259 - 34078214
Alignment:
Q  404 cgaccttgcatatattt-atacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||| |||||||||||||| |||||||| ||||    
T  34078259 cgaccttgcatatattttatacattgtccatatcaactgagctaag 34078214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 448
Target Start/End: Complemental strand, 37014045 - 37013993
Alignment:
Q  395 tttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||| ||||||||||||||| ||||||  |||||| ||||||||||||||||    
T  37014045 tttgaatcccgaccttgcatat-tttatattttgtccctaccaactgagttaag 37013993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 461
Target Start/End: Complemental strand, 39452521 - 39452452
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    |||||||| ||| |||||||||||| ||||| |||||| ||||||||||||| |||| ||| ||| ||||    
T  39452521 ggtttgaatcccagaccttgcatatttttatgcattgttcataccaactgagctaagctcacgaggacaa 39452452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 447
Target Start/End: Original strand, 40043160 - 40043212
Alignment:
Q  394 gtttgaaccccgaccttgcatatatttatacattgtccataccaactgagttaa 447  Q
    ||||||||||||||| || ||| ||| ||||||||||| |||||||||||||||    
T  40043160 gtttgaaccccgaccctgtatagatt-atacattgtccctaccaactgagttaa 40043212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 406 - 443
Target Start/End: Original strand, 43119214 - 43119251
Alignment:
Q  406 accttgcatatatttatacattgtccataccaactgag 443  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  43119214 accttgcatatatttatacattgtctatatcaactgag 43119251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 8269369 - 8269428
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    ||||||||||||| |||||||||||||| ||  ||||||| ||||||||||| ||||||||    
T  8269369 ggtttgaaccccggaccttgcatatatt-atgtattgtccttaccaactgagctaagttca 8269428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 8736495 - 8736440
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||| ||||||||||| ||||| ||||||||||||||||  |||||||    
T  8736495 ggtttgaaccccggaccttgcatat-tttatgcattgtccataccaaccaagttaag 8736440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 404 - 460
Target Start/End: Original strand, 28053253 - 28053309
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaaca 460  Q
    ||||||| |||||  |||| ||||||||||||||||||| ||||| ||| |||||||    
T  28053253 cgaccttacatattattatgcattgtccataccaactgaattaagctcacgagaaca 28053309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 29739397 - 29739342
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||| ||||||||||| ||||| |||||||| ||||||||||| ||||    
T  29739397 ggtttgaaccccggaccttgcatat-tttatgcattgtccttaccaactgagctaag 29739342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 30382556 - 30382501
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||| || |||||||||||| ||||| ||||||||| |||||||||||||||    
T  30382556 ggtttgaacgccagaccttgcatat-tttatgcattgtccaaaccaactgagttaag 30382501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 226 - 266
Target Start/End: Original strand, 38582733 - 38582773
Alignment:
Q  226 gctactgcttggtgtttttgtggtccggctgtgttctcaaa 266  Q
    ||||||||||||||||| | || ||||||||||||||||||    
T  38582733 gctactgcttggtgtttgtttgctccggctgtgttctcaaa 38582773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 452
Target Start/End: Complemental strand, 40021431 - 40021371
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    |||||||||| | ||||||| ||||  |||| |||||||||||||||||||| ||||||||    
T  40021431 ggtttgaacctcagaccttgtatattattatgcattgtccataccaactgagctaagttca 40021371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 42045373 - 42045428
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||| || ||||||||||||||| || |||||||||||||||||||| ||||    
T  42045373 ggtttgaactccagaccttgcatatatt-atgcattgtccataccaactgagctaag 42045428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 42888635 - 42888580
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||| |||||||| ||||||||||| ||||| |||||||||||||||||||| ||||    
T  42888635 ggttcgaaccccggaccttgcatat-tttatgcattgtccataccaactgagctaag 42888580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 452
Target Start/End: Original strand, 45190270 - 45190329
Alignment:
Q  393 ggtttgaaccccga-ccttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    |||||||| ||||| ||||||||||||| || |||||||||||||||||||  ||||||||    
T  45190270 ggtttgaatcccgaaccttgcatatatt-atgcattgtccataccaactgaactaagttca 45190329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 456
Target Start/End: Complemental strand, 47417843 - 47417780
Alignment:
Q  393 ggtttgaaccccga-ccttgcatatatttatacattgtccataccaactgagttaagttcatgag 456  Q
    ||||||||| |||| ||||||||||||| || ||||||||  ||||| |||||||||||||||||    
T  47417843 ggtttgaactccgaaccttgcatatatt-atgcattgtcctaaccaattgagttaagttcatgag 47417780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 48100782 - 48100727
Alignment:
Q  393 ggtttgaaccccga-ccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||| | |||||||||| ||||| |||||||||||||||||||| ||||    
T  48100782 ggtttgaaccccaaaccttgcatat-tttatgcattgtccataccaactgagctaag 48100727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 405 - 452
Target Start/End: Original strand, 189604 - 189651
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaagttca 452  Q
    ||||||||||||  |||| |||||||||||||||||||||||||||||    
T  189604 gaccttgcatattattatgcattgtccataccaactgagttaagttca 189651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 15931 - 15986
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||| ||||||||||||||| ||||||||||| |||||| |||||||||    
T  15931 ggtttgaaccccagaccttgcatatatt-atacattgtccttaccaattgagttaag 15986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 405 - 461
Target Start/End: Complemental strand, 56831 - 56776
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    ||||||||||||||| ||||||||||||||||||||||| |||| ||| ||| ||||    
T  56831 gaccttgcatatatt-atacattgtccataccaactgagctaagctcacgaggacaa 56776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 138127 - 138171
Alignment:
Q  404 cgaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    ||||||||||||||||||||||||||| ||| |||||||| ||||    
T  138127 cgaccttgcatatatttatacattgtctatatcaactgagctaag 138171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 464
Target Start/End: Original strand, 34902 - 34960
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaattt 464  Q
    ||||||||||||||| || |||||||| |||||||||||||||| ||| | |||||||||    
T  34902 gaccttgcatatatt-atgcattgtccttaccaactgagttaagctcacgtgaacaattt 34960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0458 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0458
Description:

Target: scaffold0458; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 442
Target Start/End: Original strand, 11152 - 11202
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactga 442  Q
    |||||||| ||| |||||||||||| ||||| |||||||||||||||||||    
T  11152 ggtttgaatcccagaccttgcatatttttatgcattgtccataccaactga 11202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 443
Target Start/End: Complemental strand, 17791 - 17742
Alignment:
Q  393 ggtttgaaccccgaccttgcatatatttatacattgtccataccaactgag 443  Q
    ||||||||||| |||||||||| |||| || ||||||||||||||||||||    
T  17791 ggtttgaacccggaccttgcatgtatt-atgcattgtccataccaactgag 17742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 393 - 462
Target Start/End: Complemental strand, 185323 - 185254
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaat 462  Q
    ||||||||||||| | ||||||||| ||||| |||||||||||||||||||| |||| ||| ||| |||||    
T  185323 ggtttgaaccccggatcttgcatat-tttatgcattgtccataccaactgagctaagctcacgaggacaat 185254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 7782 - 7727
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||| || ||||||||| | ||||| |||||||||||||||||||||||||    
T  7782 ggtttgaacctcggaccttgcatgt-tttatgcattgtccataccaactgagttaag 7727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 405 - 450
Target Start/End: Original strand, 110624 - 110669
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaagtt 450  Q
    ||||||||||||||||||| |||||| ||| |||||||| ||||||    
T  110624 gaccttgcatatatttataaattgtctatatcaactgagctaagtt 110669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0768 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0768
Description:

Target: scaffold0768; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 461
Target Start/End: Original strand, 6402 - 6458
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    |||||||||||||||||| ||||||| ||| |||||||| |||| ||| ||| ||||    
T  6402 gaccttgcatatatttatgcattgtctatatcaactgagctaagctcacgagtacaa 6458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0735 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0735
Description:

Target: scaffold0735; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Complemental strand, 1588 - 1533
Alignment:
Q  393 ggtttgaaccccg-accttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||| |||||||| ||||||||||| ||||| |||||||||||||||||||| ||||    
T  1588 ggttcgaaccccggaccttgcatat-tttatgcattgtccataccaactgagctaag 1533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 53381 - 53436
Alignment:
Q  393 ggtttgaacccc-gaccttgcatatatttatacattgtccataccaactgagttaag 448  Q
    |||||||||||| |||||||||||| ||||| |||||||| | ||||||||||||||    
T  53381 ggtttgaaccccagaccttgcatat-tttatgcattgtcccttccaactgagttaag 53436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 29; Significance: 0.0000008; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 462
Target Start/End: Complemental strand, 63509 - 63465
Alignment:
Q  418 tttatacattgtccataccaactgagttaagttcatgagaacaat 462  Q
    ||||| ||||||||||| |||||||| |||||||| |||||||||    
T  63509 tttatgcattgtccatatcaactgagctaagttcacgagaacaat 63465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 418 - 462
Target Start/End: Complemental strand, 70841 - 70797
Alignment:
Q  418 tttatacattgtccataccaactgagttaagttcatgagaacaat 462  Q
    ||||| ||||||||||| |||||||| |||||||| |||||||||    
T  70841 tttatgcattgtccatatcaactgagctaagttcacgagaacaat 70797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 405 - 461
Target Start/End: Original strand, 47255 - 47310
Alignment:
Q  405 gaccttgcatatatttatacattgtccataccaactgagttaagttcatgagaacaa 461  Q
    |||||||||||| ||||| |||||||||||||||||||| |||| ||| || |||||    
T  47255 gaccttgcatat-tttatgcattgtccataccaactgagctaagctcacgaaaacaa 47310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University