View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14055_high_12 (Length: 219)
Name: NF14055_high_12
Description: NF14055
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14055_high_12 |
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Alignment Details
Target: chr5 (Bit Score: 184; Significance: 1e-100; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 184; E-Value: 1e-100
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 13891195 - 13891411
Alignment:
| Q |
1 |
ttactgaaggtgctgatgatgtctttgttggggtgaggtttaatggatgatgatagaaatgttgaatgaaagtttttgttgttctttggttaatgatata |
100 |
Q |
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| T |
13891195 |
ttactgaaggtgctgatgatgtctttgttggggtgaggtttaatggatgatgatagaaatgttgaatgaaagtttttgttgttctttggttaatgatata |
13891294 |
T |
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| Q |
101 |
ggcaagaagtgtgtagtgttgttgttagaaaatgttttgcatagatagattttgggaggnnnnnnntgactgtaatggaggttgatagtatagtttttga |
200 |
Q |
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| T |
13891295 |
ggcaagaagtgtgtagtgttgttgttagaaaatgttttgcatagatagattttgggaggaaaaaaatgactgtgatggaggttgatagtatagtttttga |
13891394 |
T |
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| Q |
201 |
attgatgatgtccatct |
217 |
Q |
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|||||| |||| ||||| |
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| T |
13891395 |
attgattatgtgcatct |
13891411 |
T |
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