View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14056_high_10 (Length: 338)
Name: NF14056_high_10
Description: NF14056
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14056_high_10 |
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Alignment Details
Target: chr1 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 18 - 331
Target Start/End: Original strand, 49293602 - 49293915
Alignment:
| Q |
18 |
ggttgattaatgaattaagtctgaattaaataaataggcgtgggtattattccattcccgccaaataaccttgtatcaccatcaatggagggagagaatg |
117 |
Q |
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| T |
49293602 |
ggttgattaatgaattaagtctgaattaaataaataggcgtgggtattattccattcccgccaaataaccttgtatcaccatcaatggagggagagaatg |
49293701 |
T |
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| Q |
118 |
cgttgaacttgcttcgaagcagaatctgcgatactggattcatcttcaaagactctccagataccaattacaggtaccacaaacttcccctttttcaatt |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
49293702 |
cgttgaacttgcttcgaagcagaatctgcgatactggattcatcttcaaagactcttcagataccaattacaggtaccacaaacttcccccttttcaatt |
49293801 |
T |
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| Q |
218 |
taattttaatcatatcactgattttaatcaataatcattatcattaccagcaagctcaaattcatgatatcaacttccgtcgctgaagcatgcaacaatt |
317 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49293802 |
taattttaatcatatcactgattttaatcaataattattatcattaccagcaagctcaaattcatgatatcaacttccgtcgctgaagcatgcaacaatt |
49293901 |
T |
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| Q |
318 |
ctattcttcttctc |
331 |
Q |
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|||||||||||||| |
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| T |
49293902 |
ctattcttcttctc |
49293915 |
T |
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