View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14058_low_21 (Length: 241)
Name: NF14058_low_21
Description: NF14058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14058_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 179; Significance: 1e-96; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 20 - 230
Target Start/End: Original strand, 5742295 - 5742506
Alignment:
| Q |
20 |
tgtacaatgaacacagcatacacccatctgtttcacataatataggcgtggaagtaactaactaatgatttacctannnnnnn-accttgagattactgt |
118 |
Q |
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| T |
5742295 |
tgtacaatgaacacagcatacacccatctgtttcacataatataggcgtggaagtaactaactaatgatttacctattttttttaccttgagattactgt |
5742394 |
T |
|
| Q |
119 |
tgaaactgtcattactaaaataaatgattactacctaaccatatttaaaaattaacataagtggctgctgatcaaatcaaaatttggcttctagttccat |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
5742395 |
tgaaactgtcattactaaaataaatgattactacctaaccatatttaaaaattaacataagtggctgctgatcaaatcaagatttggcttctagttccat |
5742494 |
T |
|
| Q |
219 |
attttatatatt |
230 |
Q |
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|||||||||||| |
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| T |
5742495 |
attttatatatt |
5742506 |
T |
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