View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14058_low_4 (Length: 502)
Name: NF14058_low_4
Description: NF14058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14058_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 468; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 468; E-Value: 0
Query Start/End: Original strand, 13 - 487
Target Start/End: Original strand, 41933757 - 41934232
Alignment:
| Q |
13 |
aatattgaaactataataaaatgaagtactagcctaggtgatctgaaaatgaaaacaggtaccaaaatagtgttgatgatatgggtggcaatgttgttga |
112 |
Q |
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| T |
41933757 |
aatattgaaactataataaaatgaagtactagcctaggtgatctgaaaatgaaaacaggtaccaaaatagtgttgatgatatgggtggcaatgttgttga |
41933856 |
T |
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| Q |
113 |
gtttactagcagaatagtatttatgtcaaagtgttttgtggtgtgacacacaatgttactggttcttcccttaactccaaaa-gacaaggtggatgaaac |
211 |
Q |
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| T |
41933857 |
gtttactagcagaatagtatttatgtcaaagtgttttgtggtgtgacacacaatgttactggttcttcccttaactccaaaaagacaaggtggatgaaac |
41933956 |
T |
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| Q |
212 |
agtgaacatattttctttgatatagtgagaaagcattagaagaggagacacggactgagtatctgatccaacccgaccagagtgtgcagaccaaagcact |
311 |
Q |
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| T |
41933957 |
agtgaacatattttctttgatatagtgagaaagcattagaagaggagacacggactgagtatctgatccaacccgaccagagtgtgcagaccaaagcact |
41934056 |
T |
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| Q |
312 |
tgctggtttaaatgttaactatttgtttcccgaggttcagaaaagatcaccatgagagggtgtcaaacaaacaacacacattgtgtgtgtatttcctcgg |
411 |
Q |
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| T |
41934057 |
tgctggtttaaatgttaactatttgtttcccgaggttcagaaaagatcaccatgagagggtgtcaaacaaacaacacacattgtgtgtgtatttcctcgg |
41934156 |
T |
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| Q |
412 |
aatcattcatcaattaaacaatctatgtatgtgatccaacaacacaacttgttccattcattcattagtaatattt |
487 |
Q |
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| T |
41934157 |
aatcattcatcaattaaacaatctatgtatgtgatccaacaacacaacttgttccattcattcattagtaatattt |
41934232 |
T |
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