View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14060_high_12 (Length: 487)
Name: NF14060_high_12
Description: NF14060
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14060_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 428; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 428; E-Value: 0
Query Start/End: Original strand, 1 - 482
Target Start/End: Complemental strand, 48287265 - 48286792
Alignment:
| Q |
1 |
tatttttgtttgatattaacattttaaggttgaaatttggatagtctgatcttgcagattgtcaccttttgaaaaatagtttaataaaagttttactgca |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||| ||| |
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| T |
48287265 |
tatttttgtttgatattaacattttaaggttgaaatttggatagtctgatcttgcagattgtcaccttttgaaaaatggtttgataaaagttttaccgca |
48287166 |
T |
|
| Q |
101 |
ttttcattggagaacatgacacaactaacaagtctttccctaaacaaaaccaataaaatttgaagatgaaatgctaattaaacaaatggaataacatgaa |
200 |
Q |
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| T |
48287165 |
ttttcattggagaacatgacacaactaacaagtctttccctaaacaaaaccaataaaatttgaagatgaaatgctaa----acaaatggaataacatgaa |
48287070 |
T |
|
| Q |
201 |
tgaagattattattaactaaaaaagtgatcgatgaagagggtcatcatataacatagatagaatagttatggcgttaccatgcattaccatttgaataca |
300 |
Q |
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||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48287069 |
tgaagattattattaactaaacaagtgat----gaagagggtcatcatataacatagatagaatagttatggcgttaccatgcattaccatttgaataca |
48286974 |
T |
|
| Q |
301 |
gtgaaggaacaaggaggcatgtcaccattttgaatctgtctcaaagtaacatcaccacaaacaacagtaacaccaaccatcatggatttccaaccttgaa |
400 |
Q |
| |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
48286973 |
gtgaaggaacaaggaggcatgtcaccattttgaatctgtctcaaagtaacatcaccacaaacaacagtaacaccaatcatcatggatttccaaccttgaa |
48286874 |
T |
|
| Q |
401 |
ccctaacactcgttcttgttttcacctcaacactaggcaccaaagctttactactaaaagcacttttcaacttcctcctttg |
482 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48286873 |
ccctaacactcgttcttgttttcacctcaacactaggcaccaaagctttactactaaaagcacttttcaacttcctcctttg |
48286792 |
T |
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