View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14061_low_8 (Length: 443)

Name: NF14061_low_8
Description: NF14061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14061_low_8
NF14061_low_8
[»] chr6 (35 HSPs)
chr6 (147-260)||(26210764-26210877)
chr6 (148-262)||(26240770-26240883)
chr6 (149-194)||(7632291-7632336)
chr6 (89-141)||(26210928-26210980)
chr6 (147-217)||(995623-995693)
chr6 (147-217)||(2656608-2656678)
chr6 (147-208)||(10105880-10105941)
chr6 (147-217)||(2397830-2397900)
chr6 (147-217)||(2667263-2667333)
chr6 (147-217)||(24825225-24825295)
chr6 (147-217)||(30699321-30699391)
chr6 (147-217)||(32541415-32541485)
chr6 (147-217)||(33121673-33121743)
chr6 (147-208)||(2141637-2141698)
chr6 (147-208)||(6142445-6142506)
chr6 (147-208)||(19788647-19788708)
chr6 (147-208)||(24693207-24693268)
chr6 (147-208)||(29514964-29515025)
chr6 (148-208)||(24718127-24718187)
chr6 (149-217)||(24798486-24798554)
chr6 (150-217)||(4890067-4890134)
chr6 (154-217)||(16661547-16661610)
chr6 (140-199)||(24624065-24624124)
chr6 (196-262)||(7631956-7632022)
chr6 (147-217)||(9022900-9022970)
chr6 (147-217)||(10109349-10109419)
chr6 (147-217)||(13207013-13207083)
chr6 (147-205)||(17179336-17179394)
chr6 (147-205)||(18992034-18992092)
chr6 (147-217)||(29986218-29986288)
chr6 (147-208)||(6188594-6188655)
chr6 (171-208)||(11973417-11973454)
chr6 (147-208)||(28483107-28483167)
chr6 (147-208)||(29795520-29795580)
chr6 (147-208)||(32673817-32673878)
[»] chr5 (53 HSPs)
chr5 (151-262)||(34278707-34278818)
chr5 (147-262)||(26440588-26440703)
chr5 (161-263)||(41625283-41625385)
chr5 (160-231)||(6500182-6500253)
chr5 (161-262)||(6175074-6175174)
chr5 (148-206)||(21031706-21031764)
chr5 (147-217)||(35641829-35641899)
chr5 (147-208)||(5985008-5985069)
chr5 (147-190)||(27674628-27674671)
chr5 (147-217)||(1098235-1098305)
chr5 (147-217)||(1830786-1830856)
chr5 (147-205)||(6734853-6734911)
chr5 (147-217)||(13548273-13548343)
chr5 (147-217)||(20022920-20022990)
chr5 (147-217)||(20040349-20040419)
chr5 (147-217)||(28142988-28143058)
chr5 (147-217)||(30211675-30211745)
chr5 (147-217)||(41263063-41263133)
chr5 (147-208)||(2551561-2551622)
chr5 (147-208)||(2864085-2864146)
chr5 (147-208)||(9936822-9936883)
chr5 (147-208)||(19344633-19344694)
chr5 (147-208)||(40316253-40316314)
chr5 (147-208)||(40316887-40316948)
chr5 (147-208)||(41410593-41410654)
chr5 (147-218)||(4087588-4087659)
chr5 (162-217)||(13985728-13985783)
chr5 (147-217)||(970269-970339)
chr5 (147-217)||(1781079-1781149)
chr5 (147-217)||(4299893-4299963)
chr5 (147-205)||(5212994-5213052)
chr5 (147-217)||(14633067-14633137)
chr5 (147-217)||(21961358-21961428)
chr5 (147-217)||(27477672-27477742)
chr5 (147-217)||(31191111-31191181)
chr5 (147-217)||(34169889-34169959)
chr5 (147-217)||(37516276-37516346)
chr5 (147-217)||(37843635-37843705)
chr5 (147-217)||(39036541-39036611)
chr5 (147-205)||(39894912-39894970)
chr5 (147-217)||(40512740-40512810)
chr5 (147-217)||(41411217-41411287)
chr5 (147-208)||(1831420-1831481)
chr5 (147-208)||(14057777-14057838)
chr5 (147-208)||(14607491-14607552)
chr5 (140-217)||(14634281-14634358)
chr5 (162-243)||(21743923-21744004)
chr5 (147-208)||(30721619-30721680)
chr5 (140-217)||(33387281-33387358)
chr5 (147-208)||(33402525-33402586)
chr5 (88-141)||(41625168-41625221)
chr5 (147-215)||(14355561-14355629)
chr5 (149-217)||(30779806-30779874)
[»] chr2 (43 HSPs)
chr2 (147-230)||(33740611-33740694)
chr2 (147-208)||(14802904-14802965)
chr2 (148-262)||(45001818-45001932)
chr2 (147-218)||(24853308-24853379)
chr2 (147-261)||(31975466-31975580)
chr2 (153-216)||(25765691-25765754)
chr2 (86-141)||(33740742-33740797)
chr2 (147-206)||(36931683-36931742)
chr2 (147-208)||(5096317-5096378)
chr2 (147-205)||(7442963-7443021)
chr2 (147-217)||(7724544-7724614)
chr2 (147-217)||(8373494-8373564)
chr2 (147-217)||(12209049-12209119)
chr2 (147-217)||(38963855-38963925)
chr2 (147-217)||(41436892-41436962)
chr2 (147-208)||(4137478-4137539)
chr2 (147-208)||(10333511-10333572)
chr2 (147-208)||(30708859-30708920)
chr2 (146-207)||(41463587-41463648)
chr2 (147-208)||(45036432-45036493)
chr2 (161-205)||(15300314-15300358)
chr2 (140-199)||(7799926-7799985)
chr2 (149-208)||(11383980-11384039)
chr2 (86-141)||(24853428-24853483)
chr2 (147-217)||(3987292-3987362)
chr2 (147-217)||(8896331-8896401)
chr2 (147-217)||(9877143-9877213)
chr2 (147-217)||(15177429-15177499)
chr2 (147-217)||(20517549-20517619)
chr2 (147-217)||(22718476-22718546)
chr2 (147-205)||(23671507-23671565)
chr2 (147-217)||(27668018-27668088)
chr2 (147-217)||(39418080-39418150)
chr2 (147-205)||(42038654-42038712)
chr2 (147-217)||(43409416-43409486)
chr2 (147-208)||(6730036-6730097)
chr2 (147-208)||(13399174-13399235)
chr2 (147-208)||(15771015-15771076)
chr2 (147-208)||(18733994-18734055)
chr2 (147-208)||(25762263-25762324)
chr2 (147-208)||(40471805-40471866)
chr2 (168-208)||(3566223-3566263)
chr2 (147-183)||(4045981-4046017)
[»] chr3 (50 HSPs)
chr3 (154-260)||(40414939-40415045)
chr3 (147-208)||(48690184-48690245)
chr3 (161-206)||(4016514-4016559)
chr3 (147-208)||(29720464-29720525)
chr3 (147-208)||(46866412-46866473)
chr3 (162-262)||(22755515-22755615)
chr3 (149-217)||(28958930-28958998)
chr3 (147-222)||(39099018-39099093)
chr3 (147-217)||(9484656-9484726)
chr3 (147-217)||(12948100-12948170)
chr3 (147-217)||(29455637-29455707)
chr3 (147-217)||(29793307-29793377)
chr3 (147-217)||(34263633-34263703)
chr3 (147-217)||(34555211-34555281)
chr3 (147-217)||(49076355-49076425)
chr3 (147-208)||(901017-901078)
chr3 (147-208)||(28562203-28562264)
chr3 (147-208)||(34669677-34669738)
chr3 (147-208)||(36179065-36179126)
chr3 (147-208)||(47340013-47340074)
chr3 (148-217)||(48927732-48927801)
chr3 (147-208)||(52094023-52094084)
chr3 (149-217)||(42098558-42098626)
chr3 (147-205)||(5030061-5030120)
chr3 (161-216)||(18971494-18971549)
chr3 (153-208)||(53274930-53274985)
chr3 (147-205)||(1327443-1327501)
chr3 (147-217)||(5504942-5505012)
chr3 (147-209)||(15503154-15503216)
chr3 (147-205)||(18659183-18659241)
chr3 (147-217)||(32951196-32951266)
chr3 (147-205)||(33462777-33462835)
chr3 (147-217)||(37833031-37833101)
chr3 (147-217)||(38492182-38492252)
chr3 (147-217)||(50673737-50673807)
chr3 (149-206)||(8437184-8437241)
chr3 (147-208)||(10819372-10819433)
chr3 (147-208)||(16434786-16434847)
chr3 (147-208)||(18013399-18013460)
chr3 (147-208)||(20144851-20144912)
chr3 (161-206)||(23369174-23369219)
chr3 (147-208)||(32961315-32961376)
chr3 (148-217)||(51062522-51062591)
chr3 (147-208)||(54673909-54673970)
chr3 (147-208)||(54684597-54684658)
chr3 (153-217)||(3086278-3086342)
chr3 (149-205)||(20080968-20081024)
chr3 (148-208)||(21894316-21894376)
chr3 (153-205)||(28389210-28389262)
chr3 (147-195)||(53988831-53988879)
[»] chr8 (46 HSPs)
chr8 (147-208)||(1226573-1226634)
chr8 (161-263)||(27563031-27563131)
chr8 (147-208)||(23849684-23849745)
chr8 (150-261)||(27505695-27505806)
chr8 (150-217)||(14378620-14378687)
chr8 (154-208)||(35793637-35793691)
chr8 (153-262)||(29802664-29802773)
chr8 (157-206)||(32061242-32061291)
chr8 (147-208)||(42786029-42786090)
chr8 (147-207)||(7431250-7431310)
chr8 (147-218)||(23437744-23437815)
chr8 (86-141)||(27505859-27505914)
chr8 (147-217)||(3466343-3466413)
chr8 (147-217)||(21132859-21132929)
chr8 (147-217)||(27301922-27301992)
chr8 (147-217)||(30464492-30464562)
chr8 (147-208)||(5777485-5777546)
chr8 (147-216)||(25118847-25118916)
chr8 (149-217)||(1156511-1156579)
chr8 (149-208)||(9459225-9459284)
chr8 (147-202)||(16345252-16345307)
chr8 (147-206)||(25173740-25173799)
chr8 (147-217)||(761610-761680)
chr8 (147-205)||(1580837-1580895)
chr8 (147-205)||(6470686-6470744)
chr8 (147-205)||(6470976-6471034)
chr8 (147-217)||(8350940-8351010)
chr8 (147-217)||(18809407-18809477)
chr8 (147-217)||(20671316-20671386)
chr8 (147-217)||(25009204-25009274)
chr8 (150-208)||(25256467-25256525)
chr8 (147-217)||(25691528-25691598)
chr8 (147-217)||(30653420-30653490)
chr8 (147-217)||(43184710-43184780)
chr8 (147-208)||(4327050-4327111)
chr8 (148-217)||(4960211-4960280)
chr8 (147-208)||(13138201-13138262)
chr8 (147-208)||(15870244-15870305)
chr8 (147-208)||(23547137-23547198)
chr8 (147-208)||(38036789-38036850)
chr8 (148-209)||(40716655-40716716)
chr8 (147-208)||(44039894-44039955)
chr8 (147-208)||(44887646-44887707)
chr8 (160-208)||(5936629-5936677)
chr8 (149-205)||(14522513-14522568)
chr8 (163-207)||(43950353-43950397)
[»] chr1 (36 HSPs)
chr1 (147-208)||(8980743-8980804)
chr1 (147-262)||(32834807-32834921)
chr1 (161-216)||(13971738-13971793)
chr1 (147-209)||(43891470-43891529)
chr1 (149-208)||(3277619-3277678)
chr1 (161-209)||(40711048-40711098)
chr1 (147-217)||(3529307-3529377)
chr1 (147-217)||(6017387-6017457)
chr1 (147-217)||(7075268-7075338)
chr1 (147-217)||(10100451-10100521)
chr1 (147-208)||(1191199-1191260)
chr1 (147-208)||(5606329-5606390)
chr1 (147-208)||(5945834-5945895)
chr1 (147-208)||(31971456-31971517)
chr1 (147-208)||(44741412-44741473)
chr1 (147-208)||(50295874-50295935)
chr1 (147-208)||(52749350-52749411)
chr1 (149-217)||(38737438-38737506)
chr1 (147-217)||(5117372-5117442)
chr1 (147-217)||(10124169-10124239)
chr1 (147-217)||(45299378-45299448)
chr1 (147-217)||(50014499-50014569)
chr1 (148-206)||(51924909-51924967)
chr1 (147-205)||(52379120-52379178)
chr1 (151-208)||(2138971-2139028)
chr1 (147-208)||(4489130-4489191)
chr1 (147-208)||(23337876-23337937)
chr1 (147-208)||(30005745-30005806)
chr1 (147-208)||(31651839-31651900)
chr1 (147-208)||(36035755-36035816)
chr1 (147-217)||(40058905-40058977)
chr1 (147-208)||(48896988-48897049)
chr1 (147-208)||(49903623-49903684)
chr1 (147-217)||(52688589-52688661)
chr1 (149-217)||(23569734-23569802)
chr1 (152-208)||(38786889-38786945)
[»] chr4 (41 HSPs)
chr4 (147-262)||(19533954-19534069)
chr4 (191-263)||(30733897-30733969)
chr4 (162-262)||(42862238-42862338)
chr4 (147-217)||(28914428-28914498)
chr4 (147-217)||(39195550-39195620)
chr4 (149-217)||(4271949-4272017)
chr4 (151-217)||(14958134-14958200)
chr4 (147-217)||(18881290-18881360)
chr4 (147-217)||(31152721-31152791)
chr4 (147-217)||(37164076-37164146)
chr4 (147-217)||(43047447-43047517)
chr4 (147-217)||(43447225-43447295)
chr4 (150-208)||(50684989-50685047)
chr4 (147-208)||(10384917-10384978)
chr4 (147-208)||(42185343-42185404)
chr4 (148-217)||(53987714-53987783)
chr4 (147-214)||(27982611-27982678)
chr4 (147-217)||(1613151-1613221)
chr4 (147-205)||(5735402-5735460)
chr4 (147-205)||(7738891-7738949)
chr4 (149-207)||(10181121-10181178)
chr4 (147-217)||(11260762-11260832)
chr4 (147-217)||(18360033-18360103)
chr4 (147-217)||(19170599-19170669)
chr4 (147-217)||(19633909-19633979)
chr4 (147-217)||(19652316-19652386)
chr4 (147-217)||(24505571-24505641)
chr4 (147-217)||(28166405-28166475)
chr4 (147-217)||(28988327-28988397)
chr4 (147-217)||(36602825-36602895)
chr4 (151-209)||(36662636-36662694)
chr4 (147-217)||(39194043-39194113)
chr4 (147-217)||(39332763-39332833)
chr4 (147-217)||(46608273-46608343)
chr4 (147-217)||(46803763-46803833)
chr4 (147-208)||(3708322-3708383)
chr4 (147-208)||(8525349-8525410)
chr4 (88-141)||(20651591-20651644)
chr4 (147-208)||(39171027-39171088)
chr4 (147-208)||(55631808-55631869)
chr4 (148-216)||(40250709-40250777)
[»] scaffold0316 (1 HSPs)
scaffold0316 (161-262)||(7492-7593)
[»] chr7 (36 HSPs)
chr7 (147-208)||(38198612-38198673)
chr7 (147-216)||(14201508-14201579)
chr7 (147-217)||(35265755-35265825)
chr7 (147-208)||(40231997-40232058)
chr7 (158-208)||(5887909-5887959)
chr7 (147-217)||(9173270-9173340)
chr7 (147-217)||(16807080-16807150)
chr7 (147-217)||(28016175-28016245)
chr7 (147-217)||(35500807-35500877)
chr7 (147-217)||(38069111-38069181)
chr7 (148-217)||(4088771-4088840)
chr7 (147-208)||(5842186-5842247)
chr7 (147-216)||(7460990-7461059)
chr7 (147-208)||(38353532-38353593)
chr7 (153-206)||(46074425-46074478)
chr7 (140-208)||(38498741-38498809)
chr7 (153-207)||(36901585-36901637)
chr7 (147-217)||(3124080-3124150)
chr7 (147-217)||(10464175-10464245)
chr7 (147-217)||(18795200-18795270)
chr7 (147-205)||(31466430-31466488)
chr7 (147-217)||(31496579-31496649)
chr7 (160-206)||(31661127-31661173)
chr7 (162-208)||(31883205-31883251)
chr7 (147-217)||(36819827-36819897)
chr7 (147-217)||(36859268-36859338)
chr7 (147-217)||(46657764-46657834)
chr7 (147-217)||(47713562-47713632)
chr7 (147-217)||(48531453-48531523)
chr7 (147-216)||(23734231-23734300)
chr7 (148-217)||(26651144-26651213)
chr7 (148-217)||(30462156-30462225)
chr7 (147-208)||(35693764-35693825)
chr7 (148-208)||(4131635-4131695)
chr7 (185-217)||(18756659-18756691)
chr7 (147-207)||(27248779-27248839)
[»] scaffold0196 (1 HSPs)
scaffold0196 (147-262)||(26248-26360)
[»] scaffold0221 (1 HSPs)
scaffold0221 (147-217)||(5436-5506)
[»] scaffold0001 (1 HSPs)
scaffold0001 (147-217)||(184026-184096)
[»] scaffold0366 (1 HSPs)
scaffold0366 (147-205)||(14190-14248)
[»] scaffold0074 (1 HSPs)
scaffold0074 (147-209)||(45195-45257)
[»] scaffold0018 (1 HSPs)
scaffold0018 (147-208)||(145638-145697)
[»] scaffold0500 (1 HSPs)
scaffold0500 (147-208)||(609-670)
[»] scaffold0028 (1 HSPs)
scaffold0028 (147-216)||(25271-25339)
[»] scaffold0281 (1 HSPs)
scaffold0281 (149-217)||(13164-13232)


Alignment Details
Target: chr6 (Bit Score: 70; Significance: 2e-31; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 147 - 260
Target Start/End: Complemental strand, 26210877 - 26210764
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaagcttattatatgaacaataattattttgaa 246  Q
    |||||||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||| |||||| | | ||||| ||||||||  |||||| ||    
T  26210877 cgagacgaatccaacaacatcttatataatatattttgtctttataaattagtagaaaaataaggtcaaatcatgttatacgaacaatatgtatttttaa 26210778  T
Q  247 attaggtcatttaa 260  Q
    ||||||||||||||    
T  26210777 attaggtcatttaa 26210764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 148 - 262
Target Start/End: Complemental strand, 26240883 - 26240770
Alignment:
Q  148 gagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaagcttattatatgaacaataattattttgaaa 247  Q
    ||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||| |||||| | ||||||||||||| | |  ||||| |||    
T  26240883 gagacgaatccaacaacatcttatatgttatatttgg-ctttatatattagtagaaaaataaggtcaaaacatattatatgaacattgaagatttttaaa 26240785  T
Q  248 ttaggtcatttaaaa 262  Q
     ||||||||||||||    
T  26240784 ataggtcatttaaaa 26240770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 149 - 194
Target Start/End: Complemental strand, 7632336 - 7632291
Alignment:
Q  149 agacgaatccaacaacatcttatatgctatattttgtctttatata 194  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  7632336 agacgaatccaacaacatcttatatgttatattttgtctttatata 7632291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 26210980 - 26210928
Alignment:
Q  89 tagttgactctgtcacatatgccaatatacaattttgaatttaaatatcttta 141  Q
    ||||||||||||||||||||||||||| | ||||||||| |||||||||||||    
T  26210980 tagttgactctgtcacatatgccaatacataattttgaacttaaatatcttta 26210928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 995693 - 995623
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| |||||||||||||||||| ||||||||    
T  995693 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatagtcaaag 995623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 2656608 - 2656678
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| |||||||||||||||||| ||||||||    
T  2656608 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatagtcaaag 2656678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 10105941 - 10105880
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||||||||||||||||||||||    
T  10105941 cgagacgaatctaacgacatcttatatgatattatttatctttatatattagtagaaaaata 10105880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 2397900 - 2397830
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  2397900 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 2397830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 2667263 - 2667333
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| | |||||||||||||||| ||||||||    
T  2667263 cgagacgaatctaacgacatcttatatgatattatttatctttgtttattagtagaaaaatatagtcaaag 2667333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 24825295 - 24825225
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  24825295 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 24825225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 30699391 - 30699321
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  30699391 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 30699321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 32541415 - 32541485
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  32541415 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 32541485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 33121673 - 33121743
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||| |||  ||| |||||||  |||||||||||||||  |||||||    
T  33121673 cgagacgaatccaacaacatcttacatgatattatttatctttatgaattagtagaaaaatatggtcaaag 33121743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 2141698 - 2141637
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  2141698 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 2141637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 6142445 - 6142506
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  6142445 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 6142506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 19788708 - 19788647
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    |||||||||||||||||||||||| ||| |||  ||| | ||| ||||||||||||||||||    
T  19788708 cgagacgaatccaacaacatcttacatgatattatttatatttgtatattagtagaaaaata 19788647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 24693268 - 24693207
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||| |||||||| ||||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  24693268 cgagatgaatccaaaaacatcttatatgatattatttatctttgtatattagtagaaaaata 24693207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 29514964 - 29515025
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  29514964 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 29515025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 24718127 - 24718187
Alignment:
Q  148 gagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||| ||| ||||||||||||| ||||||   |||||||||||||| |||||||||||||    
T  24718127 gagacaaattcaacaacatcttagatgctactatttgtctttatataatagtagaaaaata 24718187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 24798486 - 24798554
Alignment:
Q  149 agacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  24798486 agacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 24798554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 150 - 217
Target Start/End: Original strand, 4890067 - 4890134
Alignment:
Q  150 gacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  4890067 gacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 4890134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 217
Target Start/End: Original strand, 16661547 - 16661610
Alignment:
Q  154 aatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||| ||| |||||||||||| |||  ||| ||||||||||||||||||||||||  |||||||    
T  16661547 aatctaacgacatcttatatgatattatttatctttatatattagtagaaaaatacggtcaaag 16661610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 199
Target Start/End: Original strand, 24624065 - 24624124
Alignment:
Q  140 tatttgccgagacgaatccaacaacatcttatatgctatattttgtctttatatattagt 199  Q
    ||||||||||||| |||| |||||||||||| ||||||   ||||| |||||||||||||    
T  24624065 tatttgccgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagt 24624124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 196 - 262
Target Start/End: Complemental strand, 7632022 - 7631956
Alignment:
Q  196 tagtagaaaaataaagtcaaagcttattatatgaacaataattattttgaaattaggtcatttaaaa 262  Q
    ||||| ||||||||||||||||| | ||||||||||| ||  |||||| ||| |||||| |||||||    
T  7632022 tagtaaaaaaataaagtcaaagcatgttatatgaacattatatattttcaaactaggtcgtttaaaa 7631956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 9022970 - 9022900
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| | ||| ||||||||||||||||||  |||||||    
T  9022970 cgagacgaatctaacgacatcttatatgatattatttatttttgtatattagtagaaaaatatggtcaaag 9022900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 10109349 - 10109419
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||  ||| |||||||||||  |||  ||| | ||| |||||||||||||||||||||||||||    
T  10109349 cgagacgaatttaacgacatcttatataatattatttatttttgtatattagtagaaaaataaagtcaaag 10109419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 13207083 - 13207013
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| |  |||||||||||||||  |||||||    
T  13207083 cgagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaag 13207013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 17179336 - 17179394
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaa 205  Q
    ||||||||||||||| |||||||||||  |||  ||| ||||| |||||||||||||||    
T  17179336 cgagacgaatccaacgacatcttatataatattatttatctttgtatattagtagaaaa 17179394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 18992034 - 18992092
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaa 205  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| || ||||||||||||    
T  18992034 cgagacgaatccaacaacatcttacatgatattatttatctttgtaaattagtagaaaa 18992092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 29986288 - 29986218
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| |  |||||||||||||||  |||||||    
T  29986288 cgagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaag 29986218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 6188594 - 6188655
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||| ||||| ||| |||||||||||| |||  ||| |||||||||||||||| |||||||    
T  6188594 cgagatgaatctaacgacatcttatatgatattatttatctttatatattagtaaaaaaata 6188655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 171 - 208
Target Start/End: Complemental strand, 11973454 - 11973417
Alignment:
Q  171 tatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||||| |||||||||||||||| |||||||    
T  11973454 tatgctatattttatctttatatattagtacaaaaata 11973417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 28483167 - 28483107
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| |||||| |||||||||||||||||    
T  28483167 cgagacgaatctaacgacatcttatatgatattatttatcttta-atattagtagaaaaata 28483107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 29795580 - 29795520
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| |||||| |||||||||||||||||    
T  29795580 cgagacgaatctaacgacatcttatatgatattatttatcttta-atattagtagaaaaata 29795520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 32673878 - 32673817
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||| | ||||||||||||||||||    
T  32673878 cgagacgaatctaacgacatcttatatgatattatttctctatgtatattagtagaaaaata 32673817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 3e-30; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 151 - 262
Target Start/End: Original strand, 34278707 - 34278818
Alignment:
Q  151 acgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaagcttattatatgaacaataattattttgaaatta 250  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| | | ||||||||||||||   ||||| ||||||    
T  34278707 acgaatctaacaacatcttatatgttatattttgtctttatatattagtagaaaaataaggtcaaaacatgttatatgaacaatacacattttaaaatta 34278806  T
Q  251 ggtcatttaaaa 262  Q
    |||||| |||||    
T  34278807 ggtcatataaaa 34278818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 147 - 262
Target Start/End: Original strand, 26440588 - 26440703
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaagcttattatatgaacaataattattttgaa 246  Q
    ||||| |||||||||| |||||||||| |||||||||||| |||||||||||||||||||||| || ||||| | ||| ||||||||||  |||||| |     
T  26440588 cgagatgaatccaacaccatcttatatcctatattttgtcgttatatattagtagaaaaataaggttaaagcatgttaaatgaacaatacatattttcag 26440687  T
Q  247 attaggtcatttaaaa 262  Q
    ||||| ||||||||||    
T  26440688 attagatcatttaaaa 26440703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 41625283 - 41625385
Alignment:
Q  161 caacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaagcttattatatgaacaataattattttgaaattaggtcatttaa 260  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||| | ||| ||||||||||  |||||| |||||  |||||||||    
T  41625283 caacatcttatatactatattttgtctttatatattaatagaaaaatagagtcaaagcgtgttacatgaacaatatatatttttaaattgtgtcatttaa 41625382  T
Q  261 aac 263  Q
    |||    
T  41625383 aac 41625385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 160 - 231
Target Start/End: Complemental strand, 6500253 - 6500182
Alignment:
Q  160 acaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaagcttattatatgaac 231  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||  | ||||||||||    
T  6500253 acaacatcttatatgctatattttgtctttatatattaatagaaaaatagagtcaaagtatgttatatgaac 6500182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 161 - 262
Target Start/End: Original strand, 6175074 - 6175174
Alignment:
Q  161 caacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaagcttattatatgaacaataattattttgaaattaggtcatttaa 260  Q
    ||||||||||||||||||||||||||||||||||||| || |||||| || ||||||  ||||||||||| ||| || ||||| |||||||| | |||||    
T  6175074 caacatcttatatgctatattttgtctttatatattaataaaaaaattaaatcaaagtatattatatgaataat-ataattttaaaattaggccctttaa 6175172  T
Q  261 aa 262  Q
    ||    
T  6175173 aa 6175174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 148 - 206
Target Start/End: Complemental strand, 21031764 - 21031706
Alignment:
Q  148 gagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaa 206  Q
    |||||||||||||||||||||||||| ||| | ||||||||| |||||||||| |||||    
T  21031764 gagacgaatccaacaacatcttatatactacaatttgtctttgtatattagtaaaaaaa 21031706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 35641899 - 35641829
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||| ||||||||||||| ||||||| |||  ||| ||||||||||||||||||||||||  |||||||    
T  35641899 cgagacaaatccaacaacattttatatgatattatttatctttatatattagtagaaaaatatggtcaaag 35641829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 5985069 - 5985008
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||||||||| |||||||||| |||  ||| ||||| ||||||||||||||||||    
T  5985069 cgagacgaatccaacaatatcttatatgatattatttatctttgtatattagtagaaaaata 5985008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 190
Target Start/End: Original strand, 27674628 - 27674671
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtcttta 190  Q
    |||||||||||||||||||||||||||| |||||||| ||||||    
T  27674628 cgagacgaatccaacaacatcttatatgatatattttatcttta 27674671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 1098305 - 1098235
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  1098305 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 1098235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 1830786 - 1830856
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||| |||  ||| |||||||  |||||||||||||||  |||||||    
T  1830786 cgagacgaatccaacaacatcttacatgatattatttatctttatgaattagtagaaaaatatggtcaaag 1830856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 6734911 - 6734853
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaa 205  Q
    ||||||||||| ||| |||||||||||| |||  ||| |||||||||||||||||||||    
T  6734911 cgagacgaatctaacgacatcttatatgatattatttatctttatatattagtagaaaa 6734853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 13548343 - 13548273
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  13548343 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 13548273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 20022990 - 20022920
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  20022990 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 20022920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 20040349 - 20040419
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  20040349 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 20040419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 28143058 - 28142988
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||| | |||||||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  28143058 cgagacgaacctaacaacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 28142988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 30211675 - 30211745
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  30211675 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 30211745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 41263063 - 41263133
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  41263063 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 41263133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 2551561 - 2551622
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    |||| |||||| |||||||||||||||  |||  ||| ||||||||||||||||||||||||    
T  2551561 cgaggcgaatctaacaacatcttatataatattatttatctttatatattagtagaaaaata 2551622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 2864085 - 2864146
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    |||||||||||||||||||||||||||| |||  ||| ||||| |  |||||||||||||||    
T  2864085 cgagacgaatccaacaacatcttatatgatattatttatctttgtgaattagtagaaaaata 2864146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 9936822 - 9936883
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  9936822 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 9936883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 19344633 - 19344694
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  19344633 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 19344694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 40316253 - 40316314
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    |||||||||||||||||||||||| ||| |||  ||| |||||||  |||||||||||||||    
T  40316253 cgagacgaatccaacaacatcttacatgatattatttatctttatgaattagtagaaaaata 40316314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 40316948 - 40316887
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  40316948 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 40316887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 41410593 - 41410654
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  41410593 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 41410654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 4087588 - 4087659
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaagc 218  Q
    |||||||||| |||||||||||  |||| |||  ||||||||| ||||||| || ||||||| |||||||||    
T  4087588 cgagacgaattcaacaacatctcgtatgatattatttgtctttgtatattattataaaaatacagtcaaagc 4087659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 217
Target Start/End: Original strand, 13985728 - 13985783
Alignment:
Q  162 aacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||||| |||| ||||||||| ||||||| |||||||||| | ||||||    
T  13985728 aacatcttatatgttataatttgtctttgtatattaatagaaaaatataatcaaag 13985783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 970269 - 970339
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||| ||||||||||||||||||| |||  ||| ||||| |  |||||||||||||||  |||||||    
T  970269 cgagacgattccaacaacatcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaag 970339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 1781079 - 1781149
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||| | ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  1781079 cgagacgaacctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 1781149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 4299963 - 4299893
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||| ||||||||||||||||||| |||  ||| ||||| |  |||||||||||||||  |||||||    
T  4299963 cgagacgattccaacaacatcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaag 4299893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 5213052 - 5212994
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaa 205  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| || ||||||||||||    
T  5213052 cgagacgaatccaacaacatcttacatgatattatttatctttgtaaattagtagaaaa 5212994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 14633137 - 14633067
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| |||||| |||||||||||  |||||||    
T  14633137 cgagacgaatctaactacatcttatatgatattatttatctttgtatatttgtagaaaaatatggtcaaag 14633067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 21961358 - 21961428
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||||||||||||||||  || |||  ||| | |||||||||||||||| |||||  |||||||    
T  21961358 cgagacgaatccaacaacatcttaattgatattatttatttttatatattagtagataaatatggtcaaag 21961428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 27477672 - 27477742
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||||||| |||| ||||||| |||  ||| ||||| |||||||||| |||||||  |||||||    
T  27477672 cgagacgaatccaacgacatattatatgatattatttatctttgtatattagtaaaaaaatacggtcaaag 27477742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 31191111 - 31191181
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||| ||||||||||  |||||||    
T  31191111 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattaatagaaaaatatggtcaaag 31191181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 34169959 - 34169889
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||| | ||||||||||||||||||  |||||||    
T  34169959 cgagacgaatctaacgacatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaag 34169889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 37516276 - 37516346
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| |  |||||||||||||||  |||||||    
T  37516276 cgagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaag 37516346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 37843705 - 37843635
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| |  |||||||||||||||  |||||||    
T  37843705 cgagacgaatccaacaacatcttacatgatattatttttctttgtgaattagtagaaaaatatggtcaaag 37843635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 39036541 - 39036611
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| |  |||||||||||||||  |||||||    
T  39036541 cgagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaag 39036611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 39894912 - 39894970
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaa 205  Q
    |||||||||||||||||||||||||||| |||  ||| ||||| |  ||||||||||||    
T  39894912 cgagacgaatccaacaacatcttatatgatattatttatctttgtgaattagtagaaaa 39894970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 40512810 - 40512740
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| |  |||||||||||| || ||||||||    
T  40512810 cgagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaagtatagtcaaag 40512740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 41411287 - 41411217
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| |  |||||||||||||||  |||||||    
T  41411287 cgagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaag 41411217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 1831481 - 1831420
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  | | ||||| ||||||||||||||||||    
T  1831481 cgagacgaatctaacgacatcttatatgatattatatatctttgtatattagtagaaaaata 1831420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 14057838 - 14057777
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||| ||||||||||    
T  14057838 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattaatagaaaaata 14057777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 14607491 - 14607552
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||   || ||||| ||||||||||||||||||    
T  14607491 cgagacgaatctaacgacatcttatatgatattacttatctttgtatattagtagaaaaata 14607552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 14634281 - 14634358
Alignment:
Q  140 tatttgccgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||| |||||| |||| |||||||||||| ||||||   ||||| |||||||||||||  |||| || ||||||||    
T  14634281 tatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatagtcaaag 14634358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 243
Target Start/End: Complemental strand, 21744004 - 21743923
Alignment:
Q  162 aacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaagcttattatatgaacaataattatttt 243  Q
    |||||||||||||||||  |||||| ||| |||||| || ||||||| ||||||||| | |||| |||| |||  |||||||    
T  21744004 aacatcttatatgctattatttgtcattacatattaataaaaaaatagagtcaaagcatgttatgtgaataatgtttatttt 21743923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 30721619 - 30721680
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||| ||||||||||    
T  30721619 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattaatagaaaaata 30721680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 33387358 - 33387281
Alignment:
Q  140 tatttgccgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||| |||||| |||| |||||||||||| ||||||   ||||| |||||||||||||  |||| || ||||||||    
T  33387358 tatttgtcgagacaaatcaaacaacatcttacatgctaatatttgtatttatatattagttaaaaagtatagtcaaag 33387281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 33402525 - 33402586
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| |||  ||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  33402525 cgagacgaatctaacggcatcttatatgatattatttatctttgtatattagtagaaaaata 33402586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 141
Target Start/End: Original strand, 41625168 - 41625221
Alignment:
Q  88 ctagttgactctgtcacatatgccaatatacaattttgaatttaaatatcttta 141  Q
    |||||| ||||||| |  |||||||||  |||||||||||||||||||||||||    
T  41625168 ctagttaactctgttatctatgccaatgcacaattttgaatttaaatatcttta 41625221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 215
Target Start/End: Complemental strand, 14355629 - 14355561
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaa 215  Q
    |||||| |||| |||  ||||||||||| |||  ||| | |||||||||||||||||||||| ||||||    
T  14355629 cgagacaaatctaacggcatcttatatgatattatttatttttatatattagtagaaaaatatagtcaa 14355561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 30779874 - 30779806
Alignment:
Q  149 agacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||| ||||||||||||||||| ||| |||  ||| ||||| || ||||||||||||||| | ||||||    
T  30779874 agacaaatccaacaacatcttacatgatattatttatctttgtaaattagtagaaaaatataatcaaag 30779806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 2e-25; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 147 - 230
Target Start/End: Complemental strand, 33740694 - 33740611
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaagcttattatatgaa 230  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||| ||||||||| | |||||||||    
T  33740694 cgagacgaatccaacaacttcttaaatgctatattttgtctttatatattaatagaaaaatagagtcaaagcatgttatatgaa 33740611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 14802904 - 14802965
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14802904 cgagatgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 14802965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 148 - 262
Target Start/End: Original strand, 45001818 - 45001932
Alignment:
Q  148 gagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaagcttattatatgaacaataattattttgaaa 247  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||   | ||||||||| ||||   ||||| |||    
T  45001818 gagacgaatccgacaacattttatatgctatattttgtctttatatattagcagaaaaatagagtcaaaatatgttatatgaataatacacattttaaaa 45001917  T
Q  248 ttaggtcatttaaaa 262  Q
     ||| ||||||||||    
T  45001918 ctagatcatttaaaa 45001932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 147 - 218
Target Start/End: Complemental strand, 24853379 - 24853308
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaagc 218  Q
    ||||||||||||| ||||||||||||||||||||||| ||||||||||||| || |||||||| ||||||||    
T  24853379 cgagacgaatccagcaacatcttatatgctatattttctctttatatattaatataaaaataatgtcaaagc 24853308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 147 - 261
Target Start/End: Original strand, 31975466 - 31975580
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaagcttattatatgaacaataattattttgaa 246  Q
    ||||||||||| ||||| |||||||||| |||||||| || |||||||||||||||||||||   |||||   | |||| ||| |||||   ||||| ||    
T  31975466 cgagacgaatctaacaatatcttatatgatatattttatcattatatattagtagaaaaataggatcaaactatgttatgtgagcaatacacatttttaa 31975565  T
Q  247 attaggtcatttaaa 261  Q
    |||||||||||||||    
T  31975566 attaggtcatttaaa 31975580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 25765754 - 25765691
Alignment:
Q  153 gaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaa 216  Q
    |||| ||||||||| ||||||| |||| ||||||||||||||| ||||||||||||| ||||||    
T  25765754 gaattcaacaacatattatatgttataatttgtctttatatatgagtagaaaaataaggtcaaa 25765691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 33740797 - 33740742
Alignment:
Q  86 acctagttgactctgtcacatatgccaatatacaattttgaatttaaatatcttta 141  Q
    ||||||||||||||||||| |||||||||| |||||||| || |||||||||||||    
T  33740797 acctagttgactctgtcacgtatgccaatacacaattttaaacttaaatatcttta 33740742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 36931742 - 36931683
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaa 206  Q
    |||||||||||||||||||||||||||| |||  ||| |||||||||||||||| |||||    
T  36931742 cgagacgaatccaacaacatcttatatgatattatttatctttatatattagtaaaaaaa 36931683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 5096378 - 5096317
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||||||||||||||||||||||    
T  5096378 cgagacgaatctaacgacatcttatatgatattatttatctttatatattagtagaaaaata 5096317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 7443021 - 7442963
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaa 205  Q
    |||||||||||||||||||||||| ||| ||| |||| ||||| || ||||||||||||    
T  7443021 cgagacgaatccaacaacatcttacatgatattttttatctttgtaaattagtagaaaa 7442963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 7724544 - 7724614
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  7724544 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 7724614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 8373564 - 8373494
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  8373564 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 8373494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 12209119 - 12209049
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||| ||||||||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  12209119 cgagatgaatccaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 12209049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 38963925 - 38963855
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  38963925 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 38963855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 41436962 - 41436892
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  41436962 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 41436892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 4137539 - 4137478
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  4137539 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 4137478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 10333511 - 10333572
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  10333511 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 10333572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 30708859 - 30708920
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| || |||||||||||||||    
T  30708859 cgagacgaatccaacaacatcttacatgatattatttatctttgtaaattagtagaaaaata 30708920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 146 - 207
Target Start/End: Complemental strand, 41463648 - 41463587
Alignment:
Q  146 ccgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaat 207  Q
    ||||||||||||||||||||||||| ||| |||  ||| ||||| || ||||||||||||||    
T  41463648 ccgagacgaatccaacaacatcttacatgatattatttatctttgtaaattagtagaaaaat 41463587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 45036493 - 45036432
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  45036493 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 45036432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 205
Target Start/End: Original strand, 15300314 - 15300358
Alignment:
Q  161 caacatcttatatgctatattttgtctttatatattagtagaaaa 205  Q
    ||||||||||||||| ||  |||||||||||||||||||||||||    
T  15300314 caacatcttatatgccatcatttgtctttatatattagtagaaaa 15300358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 199
Target Start/End: Complemental strand, 7799985 - 7799926
Alignment:
Q  140 tatttgccgagacgaatccaacaacatcttatatgctatattttgtctttatatattagt 199  Q
    ||||||||||||| |||| |||||||||||| ||||||   ||||| |||||||||||||    
T  7799985 tatttgccgagacaaatcaaacaacatcttacatgctaacatttgtatttatatattagt 7799926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 11383980 - 11384039
Alignment:
Q  149 agacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||| ||| |||||||| ||| |||  ||| ||||||||||||||||||||||||    
T  11383980 agacgaatctaacgacatcttacatgatattatttatctttatatattagtagaaaaata 11384039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 24853483 - 24853428
Alignment:
Q  86 acctagttgactctgtcacatatgccaatatacaattttgaatttaaatatcttta 141  Q
    |||||||||||| |||||| |||||||||  | ||||||||| |||||||||||||    
T  24853483 acctagttgactatgtcacgtatgccaatgcataattttgaacttaaatatcttta 24853428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 3987362 - 3987292
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| |  |||||||||||||||  |||||||    
T  3987362 cgagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaag 3987292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 8896401 - 8896331
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| ||||||||| || |||  ||| ||||| ||||||||||||||||||  |||||||    
T  8896401 cgagacgaatctaacgacatcttatgtgatattatttatctttgtatattagtagaaaaatatggtcaaag 8896331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 9877213 - 9877143
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||||||| |||  ||| ||||| |  ||||||| |||||||  |||||||    
T  9877213 cgagacgaatccaacaacatcttatatgatattatttatctttgtgaattagtaaaaaaatatggtcaaag 9877143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 15177499 - 15177429
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| |||||||||| |||||||  |||||||    
T  15177499 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtataaaaatatggtcaaag 15177429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 20517549 - 20517619
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| |  |||||||||||||||  |||||||    
T  20517549 cgagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaag 20517619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 22718476 - 22718546
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| | |||||||||| |||  ||| ||| ||||||||||||||||||||  |||||||    
T  22718476 cgagacgaatctaacgatatcttatatgatattatttatctatatatattagtagaaaaatatggtcaaag 22718546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 23671507 - 23671565
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaa 205  Q
    |||||||||||||||||||||||||||| |||  ||| ||||| |  ||||||||||||    
T  23671507 cgagacgaatccaacaacatcttatatgatattatttatctttgtgaattagtagaaaa 23671565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 27668088 - 27668018
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||| ||||||| |||  ||| |||||  |||||| ||||||||||  |||||||    
T  27668088 cgagacgaatccaacaacattttatatgatattatttatctttgcatattactagaaaaatatggtcaaag 27668018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 39418150 - 39418080
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| |  ||||||||||||||  ||||||||    
T  39418150 cgagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatgtagtcaaag 39418080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 42038654 - 42038712
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaa 205  Q
    |||||||||||||||||||||||||||| |||  ||| ||||| |  ||||||||||||    
T  42038654 cgagacgaatccaacaacatcttatatgatattatttatctttgtgaattagtagaaaa 42038712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 43409416 - 43409486
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||||||||| ||||| |||| |||  ||| ||||| ||||||| ||||||||||  |||||||    
T  43409416 cgagacgaatccaacaatatcttttatgatattatttatctttgtatattaatagaaaaatatggtcaaag 43409486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 6730036 - 6730097
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||||||| | |||||||||| |||  ||| ||| | ||||||||||||||||||    
T  6730036 cgagacgaatccaacgatatcttatatgatattatttatctatgtatattagtagaaaaata 6730097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 13399235 - 13399174
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||||||||||| |||| ||| |||  ||| ||||| || |||||||||||||||    
T  13399235 cgagacgaatccaacaacagcttacatgatattatttatctttgtaaattagtagaaaaata 13399174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 15771015 - 15771076
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||| ||||| ||| |||||||||||| |||  ||| ||||||||||||| ||||||||||    
T  15771015 cgagatgaatcaaacgacatcttatatgatattatttatctttatatattaatagaaaaata 15771076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 18734055 - 18733994
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| |||||||||||| |||  || |||| ||||  ||||||||||||||||||    
T  18734055 cgagacgaatcaaacaacatcttacatgaaattttttatcttcgtatattagtagaaaaata 18733994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 25762324 - 25762263
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||||||  |||||||||||| |||  ||| ||||| ||||||| ||||||||||    
T  25762324 cgagacgaatccaatgacatcttatatgatattatttatctttgtatattaatagaaaaata 25762263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 40471866 - 40471805
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| |||||||||| |||||||    
T  40471866 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtaaaaaaata 40471805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 168 - 208
Target Start/End: Complemental strand, 3566263 - 3566223
Alignment:
Q  168 ttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    |||| |||||| ||||||||||||||||||||| |||||||    
T  3566263 ttatgtgctatgttttgtctttatatattagtacaaaaata 3566223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 183
Target Start/End: Original strand, 4045981 - 4046017
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatatttt 183  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  4045981 cgagacgaatccaacaacatcttacatgatatatttt 4046017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 8e-25; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 154 - 260
Target Start/End: Complemental strand, 40415045 - 40414939
Alignment:
Q  154 aatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaagcttattatatgaacaataattattttgaaattaggt 253  Q
    |||||||||| |||||||||| ||||||||||||||||||||||||||||||||||  ||||| | |||||||||||  ||||  ||||| ||||||| |    
T  40415045 aatccaacaaaatcttatatgatatattttgtctttatatattagtagaaaaataagatcaaaacatattatatgaatcataaacatttttaaattagat 40414946  T
Q  254 catttaa 260  Q
    |||||||    
T  40414945 catttaa 40414939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 48690184 - 48690245
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    |||||||||||||||||||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  48690184 cgagacgaatccaacaacatcttatatgatattatttatctttgtatattagtagaaaaata 48690245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 161 - 206
Target Start/End: Complemental strand, 4016559 - 4016514
Alignment:
Q  161 caacatcttatatgctatattttgtctttatatattagtagaaaaa 206  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||    
T  4016559 caacatcttatatgatatattttgtctttatatattagtaaaaaaa 4016514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 29720525 - 29720464
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||||||| |||||||||||| |||  ||| ||||||||||||||| ||||||||    
T  29720525 cgagacgaatccaacgacatcttatatgatattatttatctttatatattagtggaaaaata 29720464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 46866473 - 46866412
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| |||||||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  46866473 cgagacgaatctaacaacatcttatatgatattatttatctttgtatattagtagaaaaata 46866412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 162 - 262
Target Start/End: Complemental strand, 22755615 - 22755515
Alignment:
Q  162 aacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaagcttattatatgaacaataattattttgaaattaggtcatttaaa 261  Q
    |||||||||||||| ||| ||||||||| ||||| ||||||||||||  |||||| | | |||| |||| | |    |||||||||||||||||||||||    
T  22755615 aacatcttatatgcaataatttgtctttgtatataagtagaaaaatatggtcaaaacatgttatgtgaatagtgcacattttgaaattaggtcatttaaa 22755516  T
Q  262 a 262  Q
    |    
T  22755515 a 22755515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 28958930 - 28958998
Alignment:
Q  149 agacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||| ||| |||||||||||| |||  ||| ||||||||||||||||||||||||  |||||||    
T  28958930 agacgaatctaacgacatcttatatgatattatttatctttatatattagtagaaaaatatggtcaaag 28958998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 222
Target Start/End: Complemental strand, 39099093 - 39099018
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaagcttat 222  Q
    ||||||||||| |||||||||| ||||| |||  ||| ||||| ||||||| |||||||||| |||||||| ||||    
T  39099093 cgagacgaatctaacaacatctaatatgatattatttatctttgtatattaatagaaaaatatagtcaaagtttat 39099018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 9484726 - 9484656
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  9484726 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 9484656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 12948170 - 12948100
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  12948170 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 12948100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 29455637 - 29455707
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  29455637 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 29455707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 29793307 - 29793377
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  29793307 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 29793377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 34263633 - 34263703
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  34263633 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 34263703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 34555281 - 34555211
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  34555281 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 34555211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 49076355 - 49076425
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  49076355 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 49076425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 901017 - 901078
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  901017 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 901078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 28562264 - 28562203
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    |||||| ||||||||||||||||| ||| |||  |||||||  |||||||||||||||||||    
T  28562264 cgagacaaatccaacaacatcttacatgttatcatttgtctacatatattagtagaaaaata 28562203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 34669738 - 34669677
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  34669738 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 34669677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 36179065 - 36179126
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  36179065 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 36179126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 47340013 - 47340074
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||| ||||| ||| |||||||||||| |||  ||| ||||||||||||||||||||||||    
T  47340013 cgagatgaatctaacgacatcttatatgatattatttatctttatatattagtagaaaaata 47340074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 48927732 - 48927801
Alignment:
Q  148 gagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  48927732 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 48927801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 52094023 - 52094084
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  52094023 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 52094084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 42098558 - 42098626
Alignment:
Q  149 agacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  42098558 agacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 42098626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 5030120 - 5030061
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgct-atattttgtctttatatattagtagaaaa 205  Q
    |||||||||||||||||||||||||||| | ||  ||| ||||| |||||||||||||||    
T  5030120 cgagacgaatccaacaacatcttatatgataattatttatctttgtatattagtagaaaa 5030061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 18971494 - 18971549
Alignment:
Q  161 caacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaa 216  Q
    |||||||||||||| |||  ||| | |||||||||||||||||||||| |||||||    
T  18971494 caacatcttatatgatattatttatttttatatattagtagaaaaatatagtcaaa 18971549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 208
Target Start/End: Original strand, 53274930 - 53274985
Alignment:
Q  153 gaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||| |||||||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  53274930 gaatctaacaacatcttatatgatattatttatctttgtatattagtagaaaaata 53274985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 1327443 - 1327501
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaa 205  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| || ||||||||||||    
T  1327443 cgagacgaatccaacaacatcttacatgatattatttatctttgtaaattagtagaaaa 1327501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 5505012 - 5504942
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||||||||| || ||||||| |||  ||| | ||| |||||||||| ||||||| ||||||||    
T  5505012 cgagacgaatccaacaatattttatatgatattatttatttttgtatattagtaaaaaaatatagtcaaag 5504942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 209
Target Start/End: Original strand, 15503154 - 15503216
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataa 209  Q
    |||||||||||||||||||||||| ||  |||  ||| ||||| || ||||||||||||||||    
T  15503154 cgagacgaatccaacaacatcttacataatattatttttctttttaaattagtagaaaaataa 15503216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 18659183 - 18659241
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaa 205  Q
    |||||||||||||||||||||||| ||| |||  ||| |||||||  ||||||||||||    
T  18659183 cgagacgaatccaacaacatcttacatgatattatttatctttatgaattagtagaaaa 18659241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 32951266 - 32951196
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||| ||||||||||||||||||| |||  ||| ||||| |  |||||||||||||||  |||||||    
T  32951266 cgagacgattccaacaacatcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaag 32951196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 33462835 - 33462777
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaa 205  Q
    ||||||||||| |||||||| ||||||| |||  ||| ||||| |||||||||||||||    
T  33462835 cgagacgaatctaacaacattttatatgatattatttatctttgtatattagtagaaaa 33462777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 37833031 - 37833101
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| |  |||||||||||||||  |||||||    
T  37833031 cgagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaag 37833101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 38492182 - 38492252
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||| ||| ||| |||  ||| ||||| || |||||||||||||||  |||||||    
T  38492182 cgagacgaatccaacaacattttacatgatattatttatctttgtaaattagtagaaaaatatggtcaaag 38492252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 50673807 - 50673737
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||| | ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  50673807 cgagacgaacctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 50673737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 206
Target Start/End: Complemental strand, 8437241 - 8437184
Alignment:
Q  149 agacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaa 206  Q
    |||||||||||| ||||||||||||| |||  ||| ||||| |||||||||| |||||    
T  8437241 agacgaatccaaaaacatcttatatgatattatttatctttgtatattagtaaaaaaa 8437184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 10819372 - 10819433
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    |||||||||||| || |||||||||||| |||  ||| ||| | ||||||||||||||||||    
T  10819372 cgagacgaatccgacgacatcttatatgatattatttatctgtgtatattagtagaaaaata 10819433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 16434786 - 16434847
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| |||||||||| |||||||    
T  16434786 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtaaaaaaata 16434847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 18013399 - 18013460
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    |||||||| || ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  18013399 cgagacgagtctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 18013460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 20144851 - 20144912
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| | |  ||| ||||||||||||||| ||||||||    
T  20144851 cgagacgaatctaacgacatcttatatgatgttatttatctttatatattagttgaaaaata 20144912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 161 - 206
Target Start/End: Original strand, 23369174 - 23369219
Alignment:
Q  161 caacatcttatatgctatattttgtctttatatattagtagaaaaa 206  Q
    |||||||||| ||| |||| |||||||||||||||||||| |||||    
T  23369174 caacatcttacatgatatagtttgtctttatatattagtaaaaaaa 23369219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 32961376 - 32961315
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| ||| |||||||| |||  ||| ||||| ||||||||||||||||||    
T  32961376 cgagacgaatctaacgacaacttatatgatattatttatctttgtatattagtagaaaaata 32961315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 51062522 - 51062591
Alignment:
Q  148 gagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||||||||||||||| ||| |||  ||| ||||| |  |||||||||||||||  |||||||    
T  51062522 gagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaag 51062591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 54673909 - 54673970
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||| |||||||||||||||||||||| |||  ||| ||||| |  |||||||||||||||    
T  54673909 cgagaagaatccaacaacatcttatatgatattatttatctttgttaattagtagaaaaata 54673970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 54684597 - 54684658
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||| ||| |||||||||||||||  |||  ||| ||||| ||||||||||||||||||    
T  54684597 cgagacggatcgaacaacatcttatataatattatttatctttgtatattagtagaaaaata 54684658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 3086278 - 3086342
Alignment:
Q  153 gaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| |||||||||| |||  ||| ||||| |||||||||| |||||||  |||||||    
T  3086278 gaatccaacaatatcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaaag 3086342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 20081024 - 20080968
Alignment:
Q  149 agacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaa 205  Q
    |||||||||||||  ||||||||||| |||  ||| |||||||||||||||| ||||    
T  20081024 agacgaatccaacggcatcttatatgatattatttatctttatatattagtataaaa 20080968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 21894316 - 21894376
Alignment:
Q  148 gagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||| |||||||||||| ||||||||| |   ||||||||| ||||||| ||||||||||    
T  21894316 gagacaaatccaacaacaacttatatgccaccatttgtctttgtatattaatagaaaaata 21894376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 153 - 205
Target Start/End: Original strand, 28389210 - 28389262
Alignment:
Q  153 gaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaa 205  Q
    |||| ||||||||||||||||||||   ||||||||| |||||||||| ||||    
T  28389210 gaattcaacaacatcttatatgctaacatttgtctttgtatattagtaaaaaa 28389262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 195
Target Start/End: Complemental strand, 53988879 - 53988831
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatat 195  Q
    |||||| ||||||||||||||||||||| |||   ||||||||||||||    
T  53988879 cgagacaaatccaacaacatcttatatgttatcaattgtctttatatat 53988831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 7e-22; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 1226634 - 1226573
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||    
T  1226634 cgagacgaatccaacaacatcttatatgctattttttgtttttatatattagtagaaaaata 1226573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 161 - 263
Target Start/End: Original strand, 27563031 - 27563131
Alignment:
Q  161 caacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaagcttattatatgaacaataattattttgaaattaggtcatttaa 260  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||  | | ||||||||||| |   || ||| ||||| ||||||||||    
T  27563031 caacatcttatatgctatattttatctttatatattagtagaaaaatagagtcaa--catgttatatgaacagtgcatacttttaaattgggtcatttaa 27563128  T
Q  261 aac 263  Q
    |||    
T  27563129 aac 27563131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 23849745 - 23849684
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||| ||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||    
T  23849745 cgagatgaatccaacaaaatcttatatgttatattttgtctttatatatttgtagaaaaata 23849684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 150 - 261
Target Start/End: Complemental strand, 27505806 - 27505695
Alignment:
Q  150 gacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaagcttattatatgaacaataattattttgaaatt 249  Q
    |||||||| ||||| |||||||||||||||||| || |||||||||| ||| | |||||| |||||||| | ||||||||| | ||    |||| |||||    
T  27505806 gacgaatctaacaagatcttatatgctatatttcgtatttatatatttgtaaataaataaggtcaaagcatgttatatgaatagtacacttttttaaatt 27505707  T
Q  250 aggtcatttaaa 261  Q
    ||||||||||||    
T  27505706 aggtcatttaaa 27505695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 150 - 217
Target Start/End: Original strand, 14378620 - 14378687
Alignment:
Q  150 gacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||| ||| |||||||||||| |||  ||| |||||||||||||||||||||||| ||||||||    
T  14378620 gacgaatctaacgacatcttatatgatattatttatctttatatattagtagaaaaatatagtcaaag 14378687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 154 - 208
Target Start/End: Complemental strand, 35793691 - 35793637
Alignment:
Q  154 aatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    |||||||||||||||||||||||||| ||||  |||||||| |||||||||||||    
T  35793691 aatccaacaacatcttatatgctataatttgattttatataatagtagaaaaata 35793637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 262
Target Start/End: Original strand, 29802664 - 29802773
Alignment:
Q  153 gaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaagcttattatatgaacaataattattttgaaattagg 252  Q
    ||||| || ||||| ||||||||||    |||||||| ||||||||||||||||||  |||||| | ||||||||||| ||||   ||||| ||||||||    
T  29802664 gaatctaaaaacatattatatgctaccacttgtctttgtatattagtagaaaaatatggtcaaaacatattatatgaataatacacattttcaaattagg 29802763  T
Q  253 tcatttaaaa 262  Q
    |||| |||||    
T  29802764 tcatataaaa 29802773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 157 - 206
Target Start/End: Original strand, 32061242 - 32061291
Alignment:
Q  157 ccaacaacatcttatatgctatattttgtctttatatattagtagaaaaa 206  Q
    |||||||||||||||||| |||| ||||||||| ||||||||||||||||    
T  32061242 ccaacaacatcttatatgatataatttgtctttgtatattagtagaaaaa 32061291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 42786029 - 42786090
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    |||||||||||||||||||||||||||| |||  ||| ||||| ||||||| ||||||||||    
T  42786029 cgagacgaatccaacaacatcttatatgatattatttatctttgtatattaatagaaaaata 42786090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 7431250 - 7431310
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaat 207  Q
    ||||||||||| |||||||||||||||| |||  ||| ||||| |||||||||||||||||    
T  7431250 cgagacgaatctaacaacatcttatatgatattatttatctttgtatattagtagaaaaat 7431310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 23437744 - 23437815
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaagc 218  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  ||||||||    
T  23437744 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaagc 23437815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 27505914 - 27505859
Alignment:
Q  86 acctagttgactctgtcacatatgccaatatacaattttgaatttaaatatcttta 141  Q
    ||||| ||||||||||||| |||| ||||| ||| |||||||||||||||||||||    
T  27505914 acctaattgactctgtcacgtatgtcaatacacagttttgaatttaaatatcttta 27505859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 3466413 - 3466343
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||  |||||||||||| |||  ||| ||||| |||||||||||||||||||| ||||||    
T  3466413 cgagacgaatctaaagacatcttatatgatattatttatctttgtatattagtagaaaaataaaatcaaag 3466343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 21132859 - 21132929
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  21132859 cgagacgaatctaacgacatcttatatgatattatttttctttgtatattagtagaaaaatatggtcaaag 21132929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 27301992 - 27301922
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  27301992 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatattgtcaaag 27301922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 30464562 - 30464492
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  30464562 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 30464492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 5777485 - 5777546
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  5777485 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 5777546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 25118916 - 25118847
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaa 216  Q
    ||||| ||||||||| |||||||||||| |||  ||| ||||| |||||||||||||||| || ||||||    
T  25118916 cgagatgaatccaacgacatcttatatgatattatttatctttgtatattagtagaaaaagaaggtcaaa 25118847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 1156511 - 1156579
Alignment:
Q  149 agacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||| ||||| |||||||||| |||  ||| | ||||||||| |||||||||||| ||||||||    
T  1156511 agacgaatctaacaatatcttatatgatattatttatttttatatatcagtagaaaaatacagtcaaag 1156579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 9459225 - 9459284
Alignment:
Q  149 agacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||| ||||| || ||||||| |||  ||| ||||||||||||||||||||||||    
T  9459225 agacgaatctaacaatattttatatgatattatttatctttatatattagtagaaaaata 9459284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 202
Target Start/End: Complemental strand, 16345307 - 16345252
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtaga 202  Q
    |||||||||| |||| |||||||||||| |||  ||| ||||||||||||||||||    
T  16345307 cgagacgaattcaacgacatcttatatgatattatttatctttatatattagtaga 16345252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 206
Target Start/End: Complemental strand, 25173799 - 25173740
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaa 206  Q
    ||||||||||||||||||||||| |||| |||  ||| ||||| ||||||| ||||||||    
T  25173799 cgagacgaatccaacaacatcttgtatgatatcgtttatctttgtatattaatagaaaaa 25173740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 761680 - 761610
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| |||||||||||||||| |||  |||   ||| ||||||||||||||||||  |||||||    
T  761680 cgagacgaatctaacaacatcttatatgatattatttaaatttgtatattagtagaaaaatatggtcaaag 761610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 1580895 - 1580837
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaa 205  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| || ||||||||||||    
T  1580895 cgagacgaatccaacaacatcttacatgatattatttatctttgtaaattagtagaaaa 1580837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 6470744 - 6470686
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaa 205  Q
    |||||||||||||||||||||||| ||| |||  ||| |||||||  ||||||||||||    
T  6470744 cgagacgaatccaacaacatcttacatgatattatttatctttatgaattagtagaaaa 6470686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 6470976 - 6471034
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaa 205  Q
    |||||||||||||||||||||||| ||| |||  ||| |||||||  ||||||||||||    
T  6470976 cgagacgaatccaacaacatcttacatgatattatttatctttatgaattagtagaaaa 6471034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 8351010 - 8350940
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| || |||| ||||||||||  |||||||    
T  8351010 cgagacgaatccaacaacatcttacatgatattatttatctttctaaattaatagaaaaatatggtcaaag 8350940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 18809407 - 18809477
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||| ||||||||||||||||||| |||  ||| ||||| |  |||||||||||||||  |||||||    
T  18809407 cgagacgattccaacaacatcttatatgatattatttatctttgtgaattagtagaaaaatatggtcaaag 18809477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 20671386 - 20671316
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||| |||| ||||| |||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  20671386 cgagacaaatctaacaatatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 20671316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 25009274 - 25009204
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||  |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  25009274 cgagacgaatctaatgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 25009204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 25256467 - 25256525
Alignment:
Q  150 gacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||||||||||||| ||| |||  ||| ||||| || |||||||||||||||    
T  25256467 gacgaatccaacaacatcttacatgatattatttatctttgtaaattagtagaaaaata 25256525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 25691528 - 25691598
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||| |||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  25691528 cgagacaaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 25691598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 30653490 - 30653420
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||| |||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  30653490 cgagacaaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 30653420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 43184710 - 43184780
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| | ||| ||||||||||||||||||  |||||||    
T  43184710 cgagacgaatctaacgacatcttatatgatattatttatttttgtatattagtagaaaaatatggtcaaag 43184780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 4327050 - 4327111
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||  |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  4327050 cgagacgaatctaaagacatcttatatgatattatttatctttgtatattagtagaaaaata 4327111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 217
Target Start/End: Complemental strand, 4960280 - 4960211
Alignment:
Q  148 gagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||| ||| |||||||||||| |||  ||| ||| | ||||||||||||||||||  |||||||    
T  4960280 gagacgaatctaacgacatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaag 4960211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 13138262 - 13138201
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| |  |||||||||||||||    
T  13138262 cgagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaata 13138201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 15870305 - 15870244
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| | ||| ||||||||||||||||||    
T  15870305 cgagacgaatctaacgacatcttatatgatattatttatttttgtatattagtagaaaaata 15870244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 23547198 - 23547137
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||  |||  ||| ||||| ||||||||||||||||||    
T  23547198 cgagacgaatctaacgacatcttatataatattatttatctttgtatattagtagaaaaata 23547137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 38036789 - 38036850
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| |||||||||||||||| | |  ||| ||||| ||||||||| ||||||||    
T  38036789 cgagacgaatctaacaacatcttatatgatgttatttatctttgtatattagttgaaaaata 38036850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 209
Target Start/End: Original strand, 40716655 - 40716716
Alignment:
Q  148 gagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataa 209  Q
    ||||| |||| |||||||||||| |||||| | ||||| |||||||||||||  ||||||||    
T  40716655 gagacaaatcaaacaacatcttacatgctaaaatttgtatttatatattagttaaaaaataa 40716716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 44039955 - 44039894
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    |||||| |||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  44039955 cgagacaaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 44039894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 44887646 - 44887707
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    |||||| |||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  44887646 cgagacaaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 44887707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 5936677 - 5936629
Alignment:
Q  160 acaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||||||| |||||||| ||||||||| | |||| |||||||    
T  5936677 acaacatcttatatgttatattttctctttatatgtaagtaaaaaaata 5936629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 205
Target Start/End: Original strand, 14522513 - 14522568
Alignment:
Q  149 agacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaa 205  Q
    |||||||||||||||||||||| ||| ||| |||| ||||| || ||||||||||||    
T  14522513 agacgaatccaacaacatcttacatgatattttttatctttgta-attagtagaaaa 14522568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 163 - 207
Target Start/End: Original strand, 43950353 - 43950397
Alignment:
Q  163 acatcttatatgctatattttgtctttatatattagtagaaaaat 207  Q
    |||||||||||||||   ||||||| |||||||||||||||||||    
T  43950353 acatcttatatgctaccatttgtctatatatattagtagaaaaat 43950397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 54; Significance: 7e-22; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 8980804 - 8980743
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  8980804 cgagacgaattcaacaacatcttatatgctatattttgtctttatatattaatagaaaaata 8980743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 147 - 262
Target Start/End: Complemental strand, 32834921 - 32834807
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaagcttattatatgaacaataattattttgaa 246  Q
    ||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||   ||||| |  ||||||||  || ||  |||||| ||    
T  32834921 cgagaagaatccaacatcatcttatatgttatattttgtctttatatattagtagaaaaataggatcaaaacaaattatatg-tcattacatatttttaa 32834823  T
Q  247 attaggtcatttaaaa 262  Q
    ||||||||||||||||    
T  32834822 attaggtcatttaaaa 32834807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 13971738 - 13971793
Alignment:
Q  161 caacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaa 216  Q
    ||||||||||||||||||||||||| ||||||| |||||| ||||||| |||||||    
T  13971738 caacatcttatatgctatattttgtttttatatgttagtaaaaaaatagagtcaaa 13971793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 147 - 209
Target Start/End: Complemental strand, 43891529 - 43891470
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataa 209  Q
    ||||||||||||   ||||||||||||  |||||||||||| |||||||||||||||||||||    
T  43891529 cgagacgaatcc---aacatcttatatattatattttgtctgtatatattagtagaaaaataa 43891470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 149 - 208
Target Start/End: Original strand, 3277619 - 3277678
Alignment:
Q  149 agacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    |||||||| ||||||||||||||||  |||  ||| ||||||||||||||||||||||||    
T  3277619 agacgaatacaacaacatcttatattatattatttatctttatatattagtagaaaaata 3277678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 161 - 209
Target Start/End: Original strand, 40711048 - 40711098
Alignment:
Q  161 caacatcttatatgctatattttgtctt--tatatattagtagaaaaataa 209  Q
    |||||||||||||| |||||||||||||  |||||||||||||||||||||    
T  40711048 caacatcttatatgttatattttgtctttatatatattagtagaaaaataa 40711098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 3529307 - 3529377
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||| |||  ||| |||||||  |||||||||||||||  |||||||    
T  3529307 cgagacgaatccaacaacatcttacatgatattatttatctttatgaattagtagaaaaatatggtcaaag 3529377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 6017387 - 6017457
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  6017387 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 6017457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 7075268 - 7075338
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  7075268 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 7075338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 10100451 - 10100521
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  10100451 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 10100521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 1191260 - 1191199
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    |||||| ||| ||||||||| |||||||||| | ||| |||||||||| |||||||||||||    
T  1191260 cgagacaaattcaacaacattttatatgctacaatttatctttatataatagtagaaaaata 1191199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 5606329 - 5606390
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  5606329 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 5606390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 5945895 - 5945834
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  5945895 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 5945834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 31971517 - 31971456
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    |||||||||||||||||||||||||||| |||  ||| ||||| |  |||||||||||||||    
T  31971517 cgagacgaatccaacaacatcttatatgatattatttatctttgttaattagtagaaaaata 31971456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 44741473 - 44741412
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  44741473 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 44741412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 50295874 - 50295935
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| |||||||||||||||| |||  ||| ||||| |||||||| |||||||||    
T  50295874 cgagacgaatctaacaacatcttatatgatattatttatctttgtatattagcagaaaaata 50295935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 52749411 - 52749350
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  52749411 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 52749350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 38737506 - 38737438
Alignment:
Q  149 agacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||| |||||||||||| ||| ||   ||| |||||||||||||||||||||||| | ||||||    
T  38737506 agacgaatcaaacaacatcttacatgataatgtttatctttatatattagtagaaaaatacaatcaaag 38737438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 5117372 - 5117442
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| | |  ||| ||||| ||||||||| |||||||| ||||||||    
T  5117372 cgagacgaatctaacgacatcttatatgatgttatttatctttgtatattagttgaaaaatacagtcaaag 5117442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 10124239 - 10124169
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||  |||  ||| ||||| ||||||||||||||||||  |||||||    
T  10124239 cgagacgaatctaacgacatcttatataatattatttatctttgtatattagtagaaaaatatggtcaaag 10124169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 45299448 - 45299378
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| |||||||||| |||||||  |||||||    
T  45299448 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtataaaaatatggtcaaag 45299378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 50014499 - 50014569
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||| | ||||||||||||||||||  |||||||    
T  50014499 cgagacgaatctaacgacatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaag 50014569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 148 - 206
Target Start/End: Original strand, 51924909 - 51924967
Alignment:
Q  148 gagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaa 206  Q
    ||||||||||||||||||||||||||| |||  ||| ||||| |||||| ||| |||||    
T  51924909 gagacgaatccaacaacatcttatatgatattatttatctttgtatattggtaaaaaaa 51924967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 52379120 - 52379178
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaa 205  Q
    |||||||||||||||||||||||| ||| |||  ||| |||||||  ||||||||||||    
T  52379120 cgagacgaatccaacaacatcttacatgatattatttatctttatgaattagtagaaaa 52379178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 151 - 208
Target Start/End: Original strand, 2138971 - 2139028
Alignment:
Q  151 acgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  2138971 acgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 2139028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 4489191 - 4489130
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||| | ||||||||||||||||||    
T  4489191 cgagacgaatctaacgacatcttatatgatattatttatctgtgtatattagtagaaaaata 4489130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 23337937 - 23337876
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||  ||||| |||||||||| |||  ||| ||||| ||||||||||||||||||    
T  23337937 cgagacgaatataacaaaatcttatatgatattatttatctttgtatattagtagaaaaata 23337876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 30005745 - 30005806
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    |||||| ||||||||||||| ||||||| |||  ||| | ||| ||||||||||||||||||    
T  30005745 cgagacaaatccaacaacattttatatgatattatttatttttgtatattagtagaaaaata 30005806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 31651839 - 31651900
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    |||||| |||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  31651839 cgagacaaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 31651900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 36035816 - 36035755
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||| ||||||| |||  ||| ||||| ||||||||||||||||||    
T  36035816 cgagacgaatctaacgacattttatatgatattatttatctttgtatattagtagaaaaata 36035755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 40058905 - 40058977
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctt--tatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||  ||||||||||||||||||||  |||||||    
T  40058905 cgagacgaatctaacgacatcttatatgatattatttatctttgtatatattagtagaaaaatacggtcaaag 40058977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 48897049 - 48896988
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||  ||||| |||||||||| |||  ||| | ||||||||||||||||||||||    
T  48897049 cgagacgaatttaacaatatcttatatgatattatttatgtttatatattagtagaaaaata 48896988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 49903623 - 49903684
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    |||||| |||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  49903623 cgagacaaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 49903684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 52688661 - 52688589
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatat--tagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| |||||  ||||||||||||| ||||||||    
T  52688661 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattatagtagaaaaatacagtcaaag 52688589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 23569802 - 23569734
Alignment:
Q  149 agacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||| ||| |||  ||| ||||| |  |||||||||||||||  |||||||    
T  23569802 agacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaag 23569734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 152 - 208
Target Start/End: Original strand, 38786889 - 38786945
Alignment:
Q  152 cgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    |||||| |||||||||||||||| |||  ||| ||||| ||||||||| ||||||||    
T  38786889 cgaatctaacaacatcttatatgatattatttatctttgtatattagttgaaaaata 38786945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 1e-20; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 147 - 262
Target Start/End: Original strand, 19533954 - 19534069
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaagcttattatatgaacaataattattttgaa 246  Q
    |||||| |||||||||| ||||||||||| | | ||||||||| ||||||||||||||||||  |||||||  | ||||||||| |||   |||||| ||    
T  19533954 cgagacaaatccaacaatatcttatatgccacaatttgtctttgtatattagtagaaaaatattgtcaaagtatgttatatgaataatgcatattttcaa 19534053  T
Q  247 attaggtcatttaaaa 262  Q
    ||||||||||||||||    
T  19534054 attaggtcatttaaaa 19534069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 191 - 263
Target Start/End: Original strand, 30733897 - 30733969
Alignment:
Q  191 tatattagtagaaaaataaagtcaaagcttattatatgaacaataattattttgaaattaggtcatttaaaac 263  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||  |||||| ||||| |||| ||||||||    
T  30733897 tatattagtagaaaaatagagtcaaagcatattatatgaacaatacatatttttaaattgggtcgtttaaaac 30733969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 162 - 262
Target Start/End: Original strand, 42862238 - 42862338
Alignment:
Q  162 aacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaagcttattatatgaacaataattattttgaaattaggtcatttaaa 261  Q
    ||||||||||||| |||||||| |||||||||||||||||||| ||| ||||||| | | |  | |||||||||   ||||| |||||||||||||||||    
T  42862238 aacatcttatatgttatattttatctttatatattagtagaaatatagagtcaaaacatgtattgtgaacaatacacatttttaaattaggtcatttaaa 42862337  T
Q  262 a 262  Q
    |    
T  42862338 a 42862338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 28914498 - 28914428
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||||||||||||||||||||||  |||||||    
T  28914498 cgagacgaatctaacgacatcttatatgatattatttatctttatatattagtagaaaaatatggtcaaag 28914428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 39195620 - 39195550
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||||||| |||  ||| ||||| |||||||||| |||||||  |||||||    
T  39195620 cgagacgaatccaacaacatcttatatgatattatttatctttgtatattagtataaaaatatggtcaaag 39195550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 4271949 - 4272017
Alignment:
Q  149 agacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||| ||| |||||||||||| |||  ||| ||||||||||||| |||||||||| ||||||||    
T  4271949 agacgaatcaaacgacatcttatatgatattatttatctttatatattaatagaaaaatacagtcaaag 4272017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 151 - 217
Target Start/End: Original strand, 14958134 - 14958200
Alignment:
Q  151 acgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| |||  ||| | ||| ||||||||||||||||||  |||||||    
T  14958134 acgaatccaacaacatcttatatgatattatttatttttgtatattagtagaaaaatatggtcaaag 14958200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 18881290 - 18881360
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||  |||||||||||| |||  ||| ||||| |||||||||||||||||| ||||||||    
T  18881290 cgagacgaatctaatgacatcttatatgatattatttatctttgtatattagtagaaaaatatagtcaaag 18881360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 31152791 - 31152721
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  31152791 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 31152721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 37164146 - 37164076
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||| || ||| |||||||||||| |||  ||| ||||| |||||||||||||||||| ||||||||    
T  37164146 cgagacgactctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatagtcaaag 37164076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 43047517 - 43047447
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  43047517 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 43047447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 43447295 - 43447225
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  43447295 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 43447225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 208
Target Start/End: Complemental strand, 50685047 - 50684989
Alignment:
Q  150 gacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    |||||||| ||| |||||||||||| |||  ||| ||||||||||||||||||||||||    
T  50685047 gacgaatctaacgacatcttatatgatattatttatctttatatattagtagaaaaata 50684989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 10384978 - 10384917
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  10384978 cgagacgaatctaacgacatcttatatgttattatttatctttgtatattagtagaaaaata 10384917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 42185404 - 42185343
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| |||||||| ||||||| |||  ||| ||||| ||||||||||||||||||    
T  42185404 cgagacgaatctaacaacattttatatgatattatttatctttgtatattagtagaaaaata 42185343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 53987714 - 53987783
Alignment:
Q  148 gagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  53987714 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 53987783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 147 - 214
Target Start/End: Complemental strand, 27982678 - 27982611
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtca 214  Q
    |||||||||||||||||||| ||||||| ||   ||| ||||| ||| |||||||||||||| |||||    
T  27982678 cgagacgaatccaacaacatattatatgatactatttatctttgtattttagtagaaaaatatagtca 27982611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 1613151 - 1613221
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||| ||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  1613151 cgagatgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 1613221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 5735402 - 5735460
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaa 205  Q
    |||||||||||||||||||||||| ||| |||  ||| |||||||  ||||||||||||    
T  5735402 cgagacgaatccaacaacatcttacatgatattatttatctttatgaattagtagaaaa 5735460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 7738949 - 7738891
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaa 205  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| || ||||||||||||    
T  7738949 cgagacgaatccaacaacatcttacatgatattatttatctttgtaaattagtagaaaa 7738891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 10181121 - 10181178
Alignment:
Q  149 agacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaat 207  Q
    |||| ||||||||||||||||||| | |||| ||| ||||| |||||||||||||||||    
T  10181121 agacaaatccaacaacatcttatacgatata-tttatctttgtatattagtagaaaaat 10181178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 11260832 - 11260762
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| | |  ||| ||||||||||||||| ||||||||  |||||||    
T  11260832 cgagacgaatctaacgacatcttatatgatgttatttatctttatatattagttgaaaaatacggtcaaag 11260762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 18360103 - 18360033
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| |  ||||||||||||||| | ||||||    
T  18360103 cgagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatataatcaaag 18360033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 19170669 - 19170599
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| |  |||||||||||||||  |||||||    
T  19170669 cgagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaag 19170599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 19633979 - 19633909
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| |  |||||||||||||||  |||||||    
T  19633979 cgagacgaatccaacaacatcttacatgatattatttttctttttgaattagtagaaaaatatggtcaaag 19633909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 19652386 - 19652316
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||| ||||||||||||| ||| |||  ||| ||||| |  ||||||||||||||| ||||||||    
T  19652386 cgagacgaattcaacaacatcttacatgatattatttttctttttgaattagtagaaaaatatagtcaaag 19652316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 24505641 - 24505571
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| | |  ||| ||||| ||||||||| |||||||| ||||||||    
T  24505641 cgagacgaatctaacgacatcttatatgatgttatttatctttgtatattagttgaaaaatacagtcaaag 24505571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 28166405 - 28166475
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| |  |||||||||||||||  |||||||    
T  28166405 cgagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaag 28166475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 28988327 - 28988397
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| |||||||||||||||| |||  ||| ||| | || |||||||||||||||  |||||||    
T  28988327 cgagacgaatctaacaacatcttatatgatattatttatctatgtacattagtagaaaaatatggtcaaag 28988397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 36602825 - 36602895
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| |  ||||||||||||||| | ||||||    
T  36602825 cgagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatataatcaaag 36602895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 151 - 209
Target Start/End: Original strand, 36662636 - 36662694
Alignment:
Q  151 acgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataa 209  Q
    |||||| ||||  ||||||||||| |||  ||| |||||||||||||||||||||||||    
T  36662636 acgaattcaacgtcatcttatatgatattatttatctttatatattagtagaaaaataa 36662694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 39194043 - 39194113
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||  ||   ||| ||||| | |||||||||||||||| ||||||||    
T  39194043 cgagacgaatccaacaacatcttacattataatgtttatctttgtgtattagtagaaaaatacagtcaaag 39194113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 39332763 - 39332833
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| |||||||||||||||| |||  |||   ||| ||||||||||||||||||  |||||||    
T  39332763 cgagacgaatctaacaacatcttatatgatattatttacttttgtatattagtagaaaaatatggtcaaag 39332833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 46608343 - 46608273
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| |||||||||| |||||||  |||||||    
T  46608343 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtataaaaatatggtcaaag 46608273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 46803763 - 46803833
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| |  |||||||||||||||  |||||||    
T  46803763 cgagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaag 46803833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 3708383 - 3708322
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| || ||||||||| |||  ||| ||||| ||||||||||||||||||    
T  3708383 cgagacgaatctaacgacgtcttatatgatattatttatctttgtatattagtagaaaaata 3708322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 8525349 - 8525410
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| || || ||||||||||||||||||    
T  8525349 cgagacgaatctaacgacatcttatatgatattatttatccttgtatattagtagaaaaata 8525410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 88 - 141
Target Start/End: Complemental strand, 20651644 - 20651591
Alignment:
Q  88 ctagttgactctgtcacatatgccaatatacaattttgaatttaaatatcttta 141  Q
    ||||||||||||||||| |||| ||||  ||||||||||| |||||||| ||||    
T  20651644 ctagttgactctgtcacgtatgtcaatgcacaattttgaacttaaatattttta 20651591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 39171088 - 39171027
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||  |||  ||| ||||| ||||||||||||||||||    
T  39171088 cgagacgaatctaacgacatcttatattatattatttatctttgtatattagtagaaaaata 39171027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 55631808 - 55631869
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| |||||||||| |||||||    
T  55631808 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtaaaaaaata 55631869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 216
Target Start/End: Original strand, 40250709 - 40250777
Alignment:
Q  148 gagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaa 216  Q
    ||||||||||||||| ||||||||||  |||  ||| | ||| |||||||||| |||||||| ||||||    
T  40250709 gagacgaatccaacaccatcttatataatattatttatatttgtatattagtataaaaataaggtcaaa 40250777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 161 - 262
Target Start/End: Original strand, 7492 - 7593
Alignment:
Q  161 caacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaagcttattatatgaacaataattattttgaaattaggtcatttaa 260  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||||   |||||   |||||| | ||||||   |||||| |||||| |||||||||    
T  7492 caacattttatatgctatattttgtctttatatattagtacaaaaatacgatcaaattatattatgtaaacaatgcatatttttaaattatgtcatttaa 7591  T
Q  261 aa 262  Q
    ||    
T  7592 aa 7593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 38198612 - 38198673
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    |||||||||||||||||||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  38198612 cgagacgaatccaacaacatcttatatgatattatttatctttgtatattagtagaaaaata 38198673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 14201508 - 14201579
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatat--tttgtctttatatattagtagaaaaataaagtcaaa 216  Q
    |||||||||||||||||||||||||||| | |||  ||| ||||| ||||||||||||||||||| ||||||    
T  14201508 cgagacgaatccaacaacatcttatatgatgtattatttatctttgtatattagtagaaaaataatgtcaaa 14201579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 35265755 - 35265825
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| |||||||||||||||||| ||||||||    
T  35265755 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatagtcaaag 35265825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 40232058 - 40231997
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||||||||||||||||||||||    
T  40232058 cgagacgaatctaacgacatcttatatgatattatttatctttatatattagtagaaaaata 40231997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 5887959 - 5887909
Alignment:
Q  158 caacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||||||||| |||  ||||||||| ||||||||||||||||||    
T  5887959 caacaacatcttatatgatatcatttgtctttgtatattagtagaaaaata 5887909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 9173270 - 9173340
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  9173270 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 9173340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 16807080 - 16807150
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  16807080 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 16807150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 28016245 - 28016175
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||| ||| |||||||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  28016245 cgagacgtatctaacaacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 28016175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 35500877 - 35500807
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||| ||||||||||||||| ||| |||  ||| |||||||  ||||||||||||||| ||||||||    
T  35500877 cgagacgattccaacaacatcttacatgatattatttatctttatgaattagtagaaaaatatagtcaaag 35500807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 38069181 - 38069111
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  38069181 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 38069111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 4088771 - 4088840
Alignment:
Q  148 gagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||| ||| |||||||||||| |||  ||| ||||| ||||||| |||||||||| ||||||||    
T  4088771 gagacgaatctaacgacatcttatatgatattatttatctttgtatattaatagaaaaatacagtcaaag 4088840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 5842247 - 5842186
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| |||||||||||||||| |||||||    
T  5842247 cgagacgaatctaacgacatcttatatgatattatttatctttatatattagtataaaaata 5842186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 7460990 - 7461059
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaa 216  Q
    ||||||||||||||| |||||||||||| |||  ||| ||||| |||||||||  ||||||| |||||||    
T  7460990 cgagacgaatccaacgacatcttatatgatattatttatctttttatattagtgaaaaaatacagtcaaa 7461059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 38353532 - 38353593
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  38353532 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 38353593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 153 - 206
Target Start/End: Complemental strand, 46074478 - 46074425
Alignment:
Q  153 gaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaa 206  Q
    |||||||||||||||||||||| |||  ||| |||||||||||||||| |||||    
T  46074478 gaatccaacaacatcttatatgatattatttatctttatatattagtaaaaaaa 46074425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 140 - 208
Target Start/End: Original strand, 38498741 - 38498809
Alignment:
Q  140 tatttgccgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||| |||||| ||||||||||||||||||| || |||  ||| | ||| ||||||||||||||||||    
T  38498741 tatttcccgagatgaatccaacaacatcttatttgatattatttatttttgtatattagtagaaaaata 38498809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 36901585 - 36901637
Alignment:
Q  153 gaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaat 207  Q
    ||||||||||||||||||||||  ||||||| |||||  ||||||||||||||||    
T  36901585 gaatccaacaacatcttatatg--atattttatctttgcatattagtagaaaaat 36901637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 3124080 - 3124150
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||| ||||||| |||  ||| | ||| |||||||||||||||||| ||||||||    
T  3124080 cgagacgaatctaacgacattttatatgatattatttatttttgtatattagtagaaaaatacagtcaaag 3124150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 10464245 - 10464175
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||| || ||||||||||||||||||| |||  ||| |||||||  |||||||||||||||  |||||||    
T  10464245 cgagaagattccaacaacatcttatatgatattatttatctttatgaattagtagaaaaatatggtcaaag 10464175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 18795270 - 18795200
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| |  |||||||||||||||  |||||||    
T  18795270 cgagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaag 18795200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 205
Target Start/End: Complemental strand, 31466488 - 31466430
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaa 205  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| || ||||||||||||    
T  31466488 cgagacgaatccaacaacatcttacatgatattatttatctttgtaaattagtagaaaa 31466430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 31496579 - 31496649
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||| ||||||||||  |||||||    
T  31496579 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattaatagaaaaatacggtcaaag 31496649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 160 - 206
Target Start/End: Original strand, 31661127 - 31661173
Alignment:
Q  160 acaacatcttatatgctatattttgtctttatatattagtagaaaaa 206  Q
    ||||||||||||||| |||  ||||| ||||||||||||||||||||    
T  31661127 acaacatcttatatgttattatttgtgtttatatattagtagaaaaa 31661173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 162 - 208
Target Start/End: Complemental strand, 31883251 - 31883205
Alignment:
Q  162 aacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||||| |||  ||||| ||||||||||||||||||||||    
T  31883251 aacatcttatatgttatcatttgtgtttatatattagtagaaaaata 31883205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 36819827 - 36819897
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| |  |||||||||||||||  |||||||    
T  36819827 cgagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaag 36819897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 36859338 - 36859268
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| |  |||||||||||||||  |||||||    
T  36859338 cgagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaag 36859268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 46657764 - 46657834
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| || |||| ||||||||||  |||||||    
T  46657764 cgagacgaatccaacaacatcttacatgatattatttatctttgtaaattaatagaaaaatatggtcaaag 46657834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 47713632 - 47713562
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| |  |||||||||||||||  |||||||    
T  47713632 cgagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaag 47713562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 217
Target Start/End: Original strand, 48531453 - 48531523
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| |  |||||||||||||||  |||||||    
T  48531453 cgagacgaatccaacaacatcttacatgatattatttatctttgtgaattagtagaaaaatatggtcaaag 48531523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 216
Target Start/End: Complemental strand, 23734300 - 23734231
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaa 216  Q
    |||||||||| |||| | |||||||||| |||  ||| ||||  |||||||||||||||||| |||||||    
T  23734300 cgagacgaattcaacgatatcttatatgatattatttatcttcgtatattagtagaaaaatatagtcaaa 23734231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 26651144 - 26651213
Alignment:
Q  148 gagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||| |||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  26651144 gagacaaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 26651213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 217
Target Start/End: Original strand, 30462156 - 30462225
Alignment:
Q  148 gagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||| ||| |||||||||||| |||  ||| ||||| |||||||||| |||||||  |||||||    
T  30462156 gagacgaatctaacgacatcttatatgatattatttatctttgtatattagtaaaaaaatatggtcaaag 30462225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 35693764 - 35693825
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||| ||| |||||||||||| |||  ||| | ||| ||||||||||||||||||    
T  35693764 cgagacgaatctaacgacatcttatatgatattatttatttttgtatattagtagaaaaata 35693825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 148 - 208
Target Start/End: Original strand, 4131635 - 4131695
Alignment:
Q  148 gagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||| |||| |||||||||||| ||||||  |||||| |||||||||||||  |||||||    
T  4131635 gagacaaatcaaacaacatcttacatgctaacttttgtatttatatattagttaaaaaata 4131695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 185 - 217
Target Start/End: Complemental strand, 18756691 - 18756659
Alignment:
Q  185 tctttatatattagtagaaaaataaagtcaaag 217  Q
    |||||||||||||||||||||||| ||||||||    
T  18756691 tctttatatattagtagaaaaatatagtcaaag 18756659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 207
Target Start/End: Original strand, 27248779 - 27248839
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaat 207  Q
    ||||||||||||||||| |||||||||| |||   || | ||| |||||||||||||||||    
T  27248779 cgagacgaatccaacaatatcttatatgatattaattatttttgtatattagtagaaaaat 27248839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0196 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0196
Description:

Target: scaffold0196; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 147 - 262
Target Start/End: Complemental strand, 26360 - 26248
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaagcttattatatgaacaataattattttgaa 246  Q
    ||||||||||||   ||||| || |||||||||||||||||||||||||||||| |||||||   |||||   |||||| | ||||||   |||||| ||    
T  26360 cgagacgaatcc---aacattttttatgctatattttgtctttatatattagtacaaaaatatgatcaaattatattatgtaaacaatgcatatttttaa 26264  T
Q  247 attaggtcatttaaaa 262  Q
    |||| |||||||||||    
T  26263 attatgtcatttaaaa 26248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 5506 - 5436
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  5506 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 5436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 147 - 217
Target Start/End: Complemental strand, 184096 - 184026
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||  |||||||    
T  184096 cgagacgaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaatatggtcaaag 184026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 205
Target Start/End: Original strand, 14190 - 14248
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaa 205  Q
    |||||||||||||||||||||||| ||| |||  ||| ||||| || ||||||||||||    
T  14190 cgagacgaatccaacaacatcttacatgatattatttatctttgtaaattagtagaaaa 14248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 209
Target Start/End: Complemental strand, 45257 - 45195
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataa 209  Q
    |||||||||||| ||||||| ||||||| |||  ||| ||||| ||||| |||||||||||||    
T  45257 cgagacgaatcctacaacatgttatatgatattatttatctttgtatataagtagaaaaataa 45195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 208
Target Start/End: Complemental strand, 145697 - 145638
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    ||||||||||||||||||||||  |||| |||  ||| ||||| ||||||||||||||||||    
T  145697 cgagacgaatccaacaacatct--tatgatattatttatctttgtatattagtagaaaaata 145638  T

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Target: scaffold0500 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0500
Description:

Target: scaffold0500; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 208
Target Start/End: Original strand, 609 - 670
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaata 208  Q
    |||||| |||| ||| |||||||||||| |||  ||| ||||| ||||||||||||||||||    
T  609 cgagacaaatctaacgacatcttatatgatattatttatctttgtatattagtagaaaaata 670  T

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Target: scaffold0028 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 216
Target Start/End: Original strand, 25271 - 25339
Alignment:
Q  147 cgagacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaa 216  Q
    ||||||||||| || ||||||||||||| |||  ||| ||||||||||||| || ||||||| |||||||    
T  25271 cgagacgaatcaaagaacatcttatatgatattatttatctttatatattaata-aaaaatatagtcaaa 25339  T

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Target: scaffold0281 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0281
Description:

Target: scaffold0281; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 149 - 217
Target Start/End: Complemental strand, 13232 - 13164
Alignment:
Q  149 agacgaatccaacaacatcttatatgctatattttgtctttatatattagtagaaaaataaagtcaaag 217  Q
    ||||||||| ||||| |||||||||| |||  ||| ||| | ||||||||||||||||||  |||||||    
T  13232 agacgaatctaacaatatcttatatgatattatttatctatgtatattagtagaaaaatatggtcaaag 13164  T

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