View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14063_low_10 (Length: 420)
Name: NF14063_low_10
Description: NF14063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14063_low_10 |
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Alignment Details
Target: chr8 (Bit Score: 378; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 378; E-Value: 0
Query Start/End: Original strand, 1 - 404
Target Start/End: Complemental strand, 36534970 - 36534563
Alignment:
| Q |
1 |
caaaacaaccatatacaat---atatgtatacttgtgaatgcatgaaataaaacctgaataattaggctaaaagccaaaagtttctatgagttttagtat |
97 |
Q |
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||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36534970 |
caaaacaaccatatacaattccatatgtatacttgtgaatgcatgaaataaaacctgaataattaggctaaaagccaaaagtttctatgagttttagtat |
36534871 |
T |
|
| Q |
98 |
tgagaacatatcctccattttgtgcttttctttgaactgcaacacaggtgcatgtgcccggagtgttttggatcaaaaactccgccgtgtcaaacatttt |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36534870 |
tgagaacatatcctccattttgtgcttttctttgaactgcaacacaggtgcatgtgcccggagtgttttggatcaaaaactccgccgtgtcaaacatttt |
36534771 |
T |
|
| Q |
198 |
tacccctttcaatgatcctcctgtaggtcgtttatatctgcacattcaaatttaaaatttaaaatagaaacaaaaatgtgcatgcatatggttcaa-ttg |
296 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |
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| T |
36534770 |
tacccctttcaatgatcctcctgtaggtcgtttatatctgcacattcaaatttaaaattttaaatagaaacaaaaatgtgcatgcatatggttcaatttg |
36534671 |
T |
|
| Q |
297 |
accaaataaacatacttttttgtttatataaaattaaagggattatatgatttattatatacttaccctaataatgtggaagaaagagtgcgtttttggc |
396 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36534670 |
accaaataaacatacttttttgtttatataaaattaaagggattatatgatttattctatacttaccctaataatgtggaagaaagagtgcgtttttggc |
36534571 |
T |
|
| Q |
397 |
ctataact |
404 |
Q |
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|||||||| |
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| T |
36534570 |
ctataact |
36534563 |
T |
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