View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14063_low_3 (Length: 694)

Name: NF14063_low_3
Description: NF14063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14063_low_3
NF14063_low_3
[»] chr7 (1 HSPs)
chr7 (18-611)||(37147192-37147788)
[»] chr1 (9 HSPs)
chr1 (31-612)||(46621348-46621935)
chr1 (63-621)||(46627060-46627621)
chr1 (204-336)||(46428924-46429056)
chr1 (376-547)||(15800356-15800527)
chr1 (477-547)||(15820828-15820898)
chr1 (474-548)||(15829939-15830013)
chr1 (474-548)||(15831667-15831741)
chr1 (474-548)||(15833394-15833468)
chr1 (476-547)||(15828314-15828385)
[»] chr5 (6 HSPs)
chr5 (341-464)||(39174079-39174202)
chr5 (474-550)||(37328099-37328175)
chr5 (476-543)||(22654325-22654392)
chr5 (386-418)||(38750124-38750156)
chr5 (386-418)||(38865932-38865964)
chr5 (386-418)||(39310678-39310710)
[»] scaffold0496 (1 HSPs)
scaffold0496 (294-438)||(12299-12443)
[»] scaffold0754 (1 HSPs)
scaffold0754 (474-548)||(3910-3984)
[»] scaffold0563 (5 HSPs)
scaffold0563 (474-548)||(10442-10516)
scaffold0563 (474-548)||(760-834)
scaffold0563 (474-548)||(3283-3357)
scaffold0563 (474-548)||(5111-5185)
scaffold0563 (474-548)||(7577-7651)
[»] scaffold0492 (1 HSPs)
scaffold0492 (474-548)||(802-876)
[»] chr6 (1 HSPs)
chr6 (291-359)||(25082377-25082445)


Alignment Details
Target: chr7 (Bit Score: 449; Significance: 0; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 449; E-Value: 0
Query Start/End: Original strand, 18 - 611
Target Start/End: Original strand, 37147192 - 37147788
Alignment:
Q  18 cctatatatgtcgtcctctaccatagcattagatatatattggtaggagttaggacagtcttaaaaggagagctcaaacgcttaaacataatgaagcttt 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  37147192 cctatatatgtcgtcctctaccatagcattagatatatattggtaggagttaggacagtcttaaaaggagagctcaaacgcttaaacataatgaagcctt 37147291  T
Q  118 gaaacctacagcaataaaattagcatataatataaca----attcaaaagcttaagccagcaatgaaagtgaacataatgaaaggggaagaagttttagc 213  Q
    |||||||||||||||||||| ||||||||||||||||    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||     
T  37147292 gaaacctacagcaataaaataagcatataatataacatttaattcaaaagcttaagccagcaatgaaagtgaacataatggaaggggaagaagttttagt 37147391  T
Q  214 ttacatttataagtcccacatcgtgtatttcataaaagaaactagtctttataaacttatgacaaggttgtcaccttgccgagttagataacatcaactt 313  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||| ||||||||||| ||||||||||||||    
T  37147392 ttacatttataagtcccacatcgtgtatttcataaaagaaactagtctttataatcttatgacaaggctatcagcttgccgagttggataacatcaactt 37147491  T
Q  314 gtaacccaagtgggggcaacaatgcggtggaacatggcttaggatttgccaggttgggtaggtggctgcaccatgctggcctgtccactccaagttgaga 413  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| ||||||||||||||||    
T  37147492 gtaacccaagtgggggcaacaatgtggtggaacatggcttaggatttgccaggttgggttagtggctgcaccatgctggcctgcccactccaagttgaga 37147591  T
Q  414 gttggccaatgggtcctaggtgaaggcttgagtctccttggtcctagactggtggacatagcgtgaggctggcttcacagagcagtgagtaccactggct 513  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||||| || ||  ||||||||||||||||||||||||| ||||||  | | ||    
T  37147592 gttggccaatgggacctaggcgaaggcttgagtctccttggtcctagactggcgggcactgcgtgaggctggcttcacagagcagcgagtactgccgcct 37147691  T
Q  514 cttgacagtggagggataacaggctgctgcacttctagcctaccatgcctggttagcctagccacatgaaccaccacttttttgtttcaagtgtcact 611  Q
    ||||||||||||||||||||||||||||||||| |||||| || | ||||||| |||||||| |||||||||||||| ||||||||||||| ||||||    
T  37147692 cttgacagtggagggataacaggctgctgcactgctagcccacaaagcctggtgagcctagctacatgaaccaccac-tttttgtttcaagcgtcact 37147788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 254; Significance: 1e-141; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 31 - 612
Target Start/End: Complemental strand, 46621935 - 46621348
Alignment:
Q  31 tcctctaccatagcattagatatatattggtaggagttaggacagtcttaaaaggagagctcaaacgcttaaacataatgaagctttgaaacctacagca 130  Q
    |||| ||||||||||| | ||||||||  |||||| ||||||||||| || ||||||||| |||| ||||||||| || ||||| |||||||||||| ||    
T  46621935 tcctataccatagcatcaaatatatatgtgtaggaattaggacagtcatagaaggagagcccaaaagcttaaacacaacgaagccttgaaacctacatca 46621836  T
Q  131 ataaaattagcatataatataacaattcaaaagcttaagccagcaatgaaagt--------gaacataatgaaaggggaagaagttttagcttacattta 222  Q
    ||||||||||||||  || | |  ||||||||||||| |  ||||||||||||        ||||||  || |||||||||||||||||| | |||||||    
T  46621835 ataaaattagcatagcatctta--attcaaaagcttaggtgagcaatgaaagttgaacaatgaacatggtggaaggggaagaagttttagttaacattta 46621738  T
Q  223 taagtcccacatcgtgtatttcataaaagaaactagtctttataaacttatgacaaggttgtcaccttgccgagttagataacatcaacttgtaacccaa 322  Q
     ||||||||||||| | ||||||| | |||||  ||||| ||||||||| || ||||| || || ||||||||||| | |||| ||||||||||||||||    
T  46621737 gaagtcccacatcgagaatttcatgatagaaataagtctatataaacttctggcaaggctgccagcttgccgagttgggtaacttcaacttgtaacccaa 46621638  T
Q  323 gtgggggcaacaatgcggtggaacatggcttaggatttgccaggttgggtaggtggctgcaccatgctggcctgtccactccaagttgagagttggccaa 422  Q
    |||||||||  || | | |||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  46621637 gtgggggcatgaaggtgatggaacatggcttaagatttgccaggttgggttggtggctgcaccatgctggcctgcccactccaagttgagagttggccaa 46621538  T
Q  423 tgggtcctaggtgaaggcttgagtctccttggtcctagactggtggacatagcgtgaggctggcttcacagagcagtgagtaccactggctcttgacagt 522  Q
    || | |||||| ||||||||||||||||||||||||||||||| || ||  | |||||||||| ||||||||||||  |  ||| | | |||||||||||    
T  46621537 tgtgacctaggcgaaggcttgagtctccttggtcctagactggagggcactgtgtgaggctggtttcacagagcagcaaacacctccgtctcttgacagt 46621438  T
Q  523 ggagggataacaggctgctgcacttctagcctaccatgcctggttagcctagccacatgaaccaccacttttttgtttcaagtgtcactt 612  Q
    ||||||||||| ||| ||||||||||||| | |  ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  46621437 ggagggataactggccgctgcacttctagtccaatatgcctggtgagcctagccacctgaaccaccacttttttgtttcaagtgtcactt 46621348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 63 - 621
Target Start/End: Complemental strand, 46627621 - 46627060
Alignment:
Q  63 ggagttaggacagtcttaaaaggagagctcaaacgcttaaacataatgaagctttgaaacctacagcaataaaattagcatataatataacaattcaaaa 162  Q
    |||||||||||||||||||| |||||| ||| | || |||||| ||||||||        ||||||||||||||||||||||  || | |  ||||||||    
T  46627621 ggagttaggacagtcttaaagggagagttcacaggcataaacacaatgaagc--------ctacagcaataaaattagcatagcatctta--attcaaaa 46627532  T
Q  163 gcttaagccagcaatgaaagt-gaacataatgaaaggggaagaagttttagcttacatttataagtcccacatcgtgtatttcataaaagaaactagtct 261  Q
    ||||| ||||||||||||||| ||||||  || |||||||||||||||||| | ||||||| ||||||||||||| ||||||||| |||||||  | |||    
T  46627531 gcttaggccagcaatgaaagttgaacatggtggaaggggaagaagttttagttaacatttagaagtcccacatcgagtatttcatgaaagaaataattct 46627432  T
Q  262 ttataaacttatgacaaggttgtcaccttgccgagttagataacatcaacttgtaacccaagtgggggcaacaatgcggtggaacatggcttaggatttg 361  Q
     ||||| ||| |||||||| || || ||||||||| | | |||| |||||||||||| ||||||||||||  || | | |||||||||||||||||||||    
T  46627431 atataatcttctgacaaggctgccagcttgccgagctgggtaacttcaacttgtaactcaagtgggggcatgaaggtgatggaacatggcttaggatttg 46627332  T
Q  362 ccaggttgggtaggtggctgcaccatgctggcctgtccactccaagttgagagtt-ggccaatgggtcctaggtgaaggcttgagtctccttggt----- 455  Q
    ||||||||||| |||||||||||||||| |||||| || |||||||||||||||| |||||||||| |||||| |||||||||||||||||||||         
T  46627331 ccaggttgggttggtggctgcaccatgccggcctgcccgctccaagttgagagttgggccaatgggacctaggcgaaggcttgagtctccttggtcctag 46627232  T
Q  456 -cctagactggtggacatagcgtgaggctggcttcacagagcagtgagtaccactggctcttgac----agtggagggataacaggctgctgcacttcta 550  Q
     |||||||||| || ||  | |||||||||| ||||||||||||  |  ||| | ||||||||||    |||||||||||||| ||| ||||||||||||    
T  46627231 acctagactggagggcactgtgtgaggctggtttcacagagcagcaaacacctccggctcttgacagtgagtggagggataactggccgctgcacttcta 46627132  T
Q  551 gcctaccatgcctggttagcctagccacatgaaccaccac-ttttttgtttcaagtgtcacttgttacataa 621  Q
    ||| |  ||||||||| ||||||||||| |||||||| || ||||||||||||||| ||||||||| |||||    
T  46627131 gcccaatatgcctggtgagcctagccacttgaaccacaactttttttgtttcaagtatcacttgttccataa 46627060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 204 - 336
Target Start/End: Original strand, 46428924 - 46429056
Alignment:
Q  204 aagttttagcttacatttataagtcccacatcgtgtatttcataaaagaaactagtctttataaacttatgacaaggttgtcaccttgccgagttagata 303  Q
    ||||||||| | || |||| ||||||||||||||||||||||| |||||||  ||||||||||| ||| |||||||| ||||| ||||| ||||| | ||    
T  46428924 aagttttagttaacttttagaagtcccacatcgtgtatttcatgaaagaaataagtctttataaccttctgacaaggctgtcaacttgctgagttgggta 46429023  T
Q  304 acatcaacttgtaacccaagtgggggcaacaat 336  Q
    ||  ||||||||||||||| |||||||| ||||    
T  46429024 accccaacttgtaacccaactgggggcatcaat 46429056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 376 - 547
Target Start/End: Complemental strand, 15800527 - 15800356
Alignment:
Q  376 tggctgcaccatgctggcctgtccactccaagttgagagttggccaatgggtcctaggtgaaggcttgagtctccttggtcctagactggtggacatagc 475  Q
    ||||||||  ||||||||||| || |||||||||||||||||| | | ||| | |  | |||||| |  ||||| | | ||||||||  | ||  || ||    
T  15800527 tggctgcaatatgctggcctgcccgctccaagttgagagttggtccacgggacttgtgcgaaggcctatgtctcttggttcctagacgagagggaatggc 15800428  T
Q  476 gtgaggctggcttcacagagcagtgagtaccactggctcttgacagtggagggataacaggctgctgcactt 547  Q
    |||||||||| |||||||||||| || |||| ||||||| ||||||||||||||| || |||||||||||||    
T  15800427 gtgaggctggtttcacagagcagcgaatacctctggctcctgacagtggagggattacgggctgctgcactt 15800356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 477 - 547
Target Start/End: Complemental strand, 15820898 - 15820828
Alignment:
Q  477 tgaggctggcttcacagagcagtgagtaccactggctcttgacagtggagggataacaggctgctgcactt 547  Q
    ||||||||| ||||||||||| ||| |||  ||||||| ||||||||||||||| ||||||||| ||||||    
T  15820898 tgaggctggtttcacagagcaatgaatacatctggctcctgacagtggagggattacaggctgcagcactt 15820828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 548
Target Start/End: Complemental strand, 15830013 - 15829939
Alignment:
Q  474 gcgtgaggctggcttcacagagcagtgagtaccactggctcttgacagtggagggataacaggctgctgcacttc 548  Q
    |||||||||||| |||||||||||| || |||| |||||||   ||||||||||||  |||||||||||||||||    
T  15830013 gcgtgaggctggtttcacagagcagcgaatacctctggctcccaacagtggagggactacaggctgctgcacttc 15829939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 548
Target Start/End: Complemental strand, 15831741 - 15831667
Alignment:
Q  474 gcgtgaggctggcttcacagagcagtgagtaccactggctcttgacagtggagggataacaggctgctgcacttc 548  Q
    |||||||||||| |||||||||||| || |||| |||||||   ||||||||||||  |||||||||||||||||    
T  15831741 gcgtgaggctggtttcacagagcagcgaatacctctggctcccaacagtggagggactacaggctgctgcacttc 15831667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 548
Target Start/End: Complemental strand, 15833468 - 15833394
Alignment:
Q  474 gcgtgaggctggcttcacagagcagtgagtaccactggctcttgacagtggagggataacaggctgctgcacttc 548  Q
    |||||||||||| |||||||||||| || |||| |||||||   ||||||||||||  |||||||||||||||||    
T  15833468 gcgtgaggctggtttcacagagcagcgaatacctctggctcccaacagtggagggactacaggctgctgcacttc 15833394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 476 - 547
Target Start/End: Complemental strand, 15828385 - 15828314
Alignment:
Q  476 gtgaggctggcttcacagagcagtgagtaccactggctcttgacagtggagggataacaggctgctgcactt 547  Q
    |||||||||| |||||| ||||| || |||| || |||| ||||||||||| ||| ||||||||||||||||    
T  15828385 gtgaggctggtttcacaaagcagcgaatacctctagctcctgacagtggagtgattacaggctgctgcactt 15828314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 3e-25; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 341 - 464
Target Start/End: Complemental strand, 39174202 - 39174079
Alignment:
Q  341 tggaacatggcttaggatttgccaggttgggtaggtggctgcaccatgctggcctgtccactccaagttgagagttggccaatgggtcctaggtgaaggc 440  Q
    ||||| ||||||||| |||||||| ||||||| | | |||||||||| |||||||||||||| |||||||||||||||||||  || |||||| |||| |    
T  39174202 tggaaaatggcttagaatttgccaagttgggttgatagctgcaccatactggcctgtccacttcaagttgagagttggccaaaaggacctaggcgaagac 39174103  T
Q  441 ttgagtctccttggtcctagactg 464  Q
    | ||||||||||||| | ||||||    
T  39174102 tcgagtctccttggtacaagactg 39174079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 474 - 550
Target Start/End: Complemental strand, 37328175 - 37328099
Alignment:
Q  474 gcgtgaggctggcttcacagagcagtgagtaccactggctcttgacagtggagggataacaggctgctgcacttcta 550  Q
    |||||||||||| ||| |||||||| ||  ||| ||||||||||||||||||||||||||| ||||| ||| |||||    
T  37328175 gcgtgaggctggtttcgcagagcagcgaagacctctggctcttgacagtggagggataacaagctgcagcagttcta 37328099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 476 - 543
Target Start/End: Original strand, 22654325 - 22654392
Alignment:
Q  476 gtgaggctggcttcacagagcagtgagtaccactggctcttgacagtggagggataacaggctgctgc 543  Q
    |||||||||| |||||| ||||| || |||| ||||||||||| ||||||||||||||| ||||||||    
T  22654325 gtgaggctggtttcacatagcagcgaatacctctggctcttgatagtggagggataacaagctgctgc 22654392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 386 - 418
Target Start/End: Original strand, 38750124 - 38750156
Alignment:
Q  386 atgctggcctgtccactccaagttgagagttgg 418  Q
    ||||||||||| |||||||||||||||||||||    
T  38750124 atgctggcctgcccactccaagttgagagttgg 38750156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 386 - 418
Target Start/End: Complemental strand, 38865964 - 38865932
Alignment:
Q  386 atgctggcctgtccactccaagttgagagttgg 418  Q
    ||||||||||| |||||||||||||||||||||    
T  38865964 atgctggcctgcccactccaagttgagagttgg 38865932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 386 - 418
Target Start/End: Complemental strand, 39310710 - 39310678
Alignment:
Q  386 atgctggcctgtccactccaagttgagagttgg 418  Q
    ||||||||||| |||||||||||||||||||||    
T  39310710 atgctggcctgcccactccaagttgagagttgg 39310678  T

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Target: scaffold0496 (Bit Score: 53; Significance: 5e-21; HSPs: 1)
Name: scaffold0496
Description:

Target: scaffold0496; HSP #1
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 294 - 438
Target Start/End: Complemental strand, 12443 - 12299
Alignment:
Q  294 gagttagataacatcaacttgtaacccaagtgggggcaacaatgcggtggaacatggcttaggatttgccaggttgggtaggtggctgcaccatgctggc 393  Q
    ||||| ||||||| |||||||||| | ||||||||||| |||   ||| ||||||| || | |||||| || ||||||| | || || ||| ||||||||    
T  12443 gagttggataacaccaacttgtaatctaagtgggggcatcaagatggtagaacatgactaaagatttgtcatgttgggttgatgacttcactatgctggc 12344  T
Q  394 ctgtccactccaagttgagagttggccaatgggtcctaggtgaag 438  Q
    ||| ||||||||||||||||||||| ||||||| |||||| ||||    
T  12343 ctgaccactccaagttgagagttggtcaatgggacctaggcgaag 12299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0754 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0754
Description:

Target: scaffold0754; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 548
Target Start/End: Original strand, 3910 - 3984
Alignment:
Q  474 gcgtgaggctggcttcacagagcagtgagtaccactggctcttgacagtggagggataacaggctgctgcacttc 548  Q
    |||||||||||| |||||||||||| || |||| |||||||   ||||||||||||  |||||||||||||||||    
T  3910 gcgtgaggctggtttcacagagcagcgaatacctctggctcccaacagtggagggactacaggctgctgcacttc 3984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0563 (Bit Score: 39; Significance: 0.000000000001; HSPs: 5)
Name: scaffold0563
Description:

Target: scaffold0563; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 548
Target Start/End: Original strand, 10442 - 10516
Alignment:
Q  474 gcgtgaggctggcttcacagagcagtgagtaccactggctcttgacagtggagggataacaggctgctgcacttc 548  Q
    |||||||||||| |||||||||||| || |||| |||||||   ||||||||||||  |||||||||||||||||    
T  10442 gcgtgaggctggtttcacagagcagcgaatacctctggctcccaacagtggagggactacaggctgctgcacttc 10516  T

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Target: scaffold0563; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 474 - 548
Target Start/End: Original strand, 760 - 834
Alignment:
Q  474 gcgtgaggctggcttcacagagcagtgagtaccactggctcttgacagtggagggataacaggctgctgcacttc 548  Q
    |||||||| ||| |||||||||||| || |||| |||||||   ||||||||||||  |||||||||||||||||    
T  760 gcgtgaggttggtttcacagagcagcgaatacctctggctcccaacagtggagggactacaggctgctgcacttc 834  T

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Target: scaffold0563; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 474 - 548
Target Start/End: Complemental strand, 3357 - 3283
Alignment:
Q  474 gcgtgaggctggcttcacagagcagtgagtaccactggctcttgacagtggagggataacaggctgctgcacttc 548  Q
    |||||||||||| |||||||||||| || |||  |||||||   ||||||||||||  |||||||||||||||||    
T  3357 gcgtgaggctggtttcacagagcagcgaatacttctggctcccaacagtggagggactacaggctgctgcacttc 3283  T

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Target: scaffold0563; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 474 - 548
Target Start/End: Complemental strand, 5185 - 5111
Alignment:
Q  474 gcgtgaggctggcttcacagagcagtgagtaccactggctcttgacagtggagggataacaggctgctgcacttc 548  Q
    |||||||||||| |||||||||||| || |||  |||||||   ||||||||||||  |||||||||||||||||    
T  5185 gcgtgaggctggtttcacagagcagcgaatacttctggctcccaacagtggagggactacaggctgctgcacttc 5111  T

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Target: scaffold0563; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 474 - 548
Target Start/End: Original strand, 7577 - 7651
Alignment:
Q  474 gcgtgaggctggcttcacagagcagtgagtaccactggctcttgacagtggagggataacaggctgctgcacttc 548  Q
    |||||||||||| |||||||||||| || |||  |||||||   ||||||||||||  |||||||||||||||||    
T  7577 gcgtgaggctggtttcacagagcagcgaatacttctggctcccaacagtggagggactacaggctgctgcacttc 7651  T

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Target: scaffold0492 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 474 - 548
Target Start/End: Original strand, 802 - 876
Alignment:
Q  474 gcgtgaggctggcttcacagagcagtgagtaccactggctcttgacagtggagggataacaggctgctgcacttc 548  Q
    |||||||||||| |||||||||||| || |||| |||||||   ||||||||||||  |||||||||||||||||    
T  802 gcgtgaggctggtttcacagagcagcgaatacctctggctcccaacagtggagggactacaggctgctgcacttc 876  T

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Target: chr6 (Bit Score: 29; Significance: 0.000001; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 291 - 359
Target Start/End: Complemental strand, 25082445 - 25082377
Alignment:
Q  291 gccgagttagataacatcaacttgtaacccaagtgggggcaacaatgcggtggaacatggcttaggatt 359  Q
    |||||||| |||||||||| |||||||| | ||||| ||||  |||| |||||||||||| | ||||||    
T  25082445 gccgagttggataacatcagcttgtaactcgagtggaggcattaatgtggtggaacatggttcaggatt 25082377  T

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