View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF14064_low_4 (Length: 343)

Name: NF14064_low_4
Description: NF14064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF14064_low_4
NF14064_low_4
[»] chr1 (72 HSPs)
chr1 (59-236)||(20434609-20434790)
chr1 (61-233)||(49936827-49937003)
chr1 (61-240)||(24635926-24636109)
chr1 (56-237)||(43452537-43452722)
chr1 (61-237)||(25888915-25889094)
chr1 (61-236)||(19897647-19897826)
chr1 (61-236)||(48762218-48762397)
chr1 (61-237)||(6314115-6314296)
chr1 (61-236)||(16975954-16976134)
chr1 (61-236)||(18618835-18619013)
chr1 (61-210)||(50351803-50351956)
chr1 (60-164)||(28375463-28375567)
chr1 (56-140)||(34369655-34369739)
chr1 (61-140)||(4097895-4097974)
chr1 (61-138)||(11421594-11421671)
chr1 (64-140)||(23175509-23175585)
chr1 (177-236)||(23817430-23817489)
chr1 (64-122)||(21256777-21256835)
chr1 (177-237)||(23920965-23921025)
chr1 (65-129)||(31529663-31529727)
chr1 (64-122)||(31083365-31083423)
chr1 (61-127)||(37639341-37639407)
chr1 (185-237)||(21255834-21255886)
chr1 (65-129)||(33097409-33097473)
chr1 (177-236)||(11422560-11422619)
chr1 (177-236)||(21641589-21641648)
chr1 (177-239)||(180843-180905)
chr1 (61-127)||(18056784-18056849)
chr1 (61-127)||(35198181-35198247)
chr1 (189-230)||(1395353-1395394)
chr1 (187-232)||(17893071-17893116)
chr1 (177-230)||(23174403-23174456)
chr1 (61-122)||(41033262-41033322)
chr1 (65-126)||(51801734-51801795)
chr1 (65-129)||(44260522-44260586)
chr1 (65-129)||(44688608-44688672)
chr1 (177-236)||(4097105-4097163)
chr1 (187-230)||(9628599-9628642)
chr1 (185-236)||(18057807-18057858)
chr1 (189-236)||(31084404-31084451)
chr1 (187-230)||(33156993-33157036)
chr1 (68-107)||(37228364-37228403)
chr1 (187-230)||(42134133-42134176)
chr1 (64-122)||(20507286-20507344)
chr1 (189-230)||(10974634-10974675)
chr1 (189-230)||(14229173-14229214)
chr1 (189-230)||(17893275-17893316)
chr1 (60-129)||(28323330-28323399)
chr1 (187-228)||(45849111-45849152)
chr1 (188-232)||(32595284-32595328)
chr1 (191-230)||(9041055-9041094)
chr1 (187-230)||(12796424-12796467)
chr1 (187-230)||(14229361-14229404)
chr1 (190-229)||(18056791-18056830)
chr1 (187-226)||(18928783-18928822)
chr1 (187-230)||(18928955-18928998)
chr1 (61-124)||(22348039-22348101)
chr1 (187-230)||(31763973-31764016)
chr1 (187-230)||(32595105-32595148)
chr1 (68-107)||(41033946-41033985)
chr1 (188-230)||(32143770-32143812)
chr1 (188-230)||(42133945-42133987)
chr1 (189-230)||(12070612-12070653)
chr1 (191-236)||(15990689-15990734)
chr1 (189-230)||(17811285-17811326)
chr1 (189-230)||(29945418-29945459)
chr1 (189-230)||(31763776-31763817)
chr1 (187-228)||(45849309-45849350)
chr1 (63-111)||(13590469-13590517)
chr1 (187-223)||(14389852-14389888)
chr1 (88-124)||(16115877-16115913)
chr1 (208-236)||(23276984-23277012)
[»] chr6 (37 HSPs)
chr6 (61-237)||(1449542-1449722)
chr6 (61-238)||(15493174-15493355)
chr6 (65-236)||(6900807-6900982)
chr6 (61-236)||(7089082-7089261)
chr6 (61-236)||(31216662-31216841)
chr6 (61-205)||(1536814-1536962)
chr6 (62-142)||(34870071-34870151)
chr6 (141-236)||(34869950-34870049)
chr6 (64-122)||(30908655-30908713)
chr6 (177-236)||(878380-878439)
chr6 (59-127)||(35119237-35119300)
chr6 (189-236)||(7765406-7765453)
chr6 (18-60)||(4621803-4621845)
chr6 (185-234)||(30909437-30909486)
chr6 (59-124)||(33346374-33346438)
chr6 (64-119)||(7764444-7764499)
chr6 (191-237)||(18755657-18755703)
chr6 (188-230)||(19284372-19284414)
chr6 (188-230)||(21384990-21385032)
chr6 (61-127)||(34399641-34399706)
chr6 (189-230)||(10588955-10588996)
chr6 (188-229)||(15034992-15035033)
chr6 (189-230)||(22857489-22857530)
chr6 (63-127)||(18611190-18611254)
chr6 (190-229)||(12394399-12394438)
chr6 (187-230)||(14237779-14237822)
chr6 (189-232)||(20522850-20522893)
chr6 (187-230)||(22857677-22857720)
chr6 (187-230)||(25119470-25119513)
chr6 (190-229)||(33346390-33346429)
chr6 (75-129)||(4338618-4338672)
chr6 (188-230)||(10698578-10698620)
chr6 (75-129)||(16968021-16968075)
chr6 (189-230)||(19281284-19281325)
chr6 (189-230)||(25119107-25119148)
chr6 (64-120)||(12394387-12394442)
chr6 (66-118)||(27079939-27079991)
[»] chr5 (54 HSPs)
chr5 (61-236)||(37456680-37456859)
chr5 (61-236)||(26637724-26637903)
chr5 (59-239)||(14394466-14394650)
chr5 (65-236)||(14940243-14940418)
chr5 (60-237)||(3883921-3884102)
chr5 (61-236)||(15416664-15416843)
chr5 (61-236)||(13552983-13553162)
chr5 (60-142)||(30783434-30783516)
chr5 (141-236)||(30783538-30783636)
chr5 (59-129)||(16552637-16552707)
chr5 (59-129)||(33868153-33868223)
chr5 (63-127)||(16668794-16668858)
chr5 (189-230)||(15559050-15559091)
chr5 (63-127)||(13362772-13362835)
chr5 (63-127)||(25017217-25017280)
chr5 (177-237)||(28069241-28069301)
chr5 (187-230)||(11660982-11661025)
chr5 (187-230)||(22695540-22695583)
chr5 (189-232)||(23155524-23155567)
chr5 (189-232)||(25671290-25671333)
chr5 (187-230)||(39861780-39861823)
chr5 (185-235)||(13363792-13363842)
chr5 (61-127)||(28070153-28070218)
chr5 (61-127)||(34329127-34329192)
chr5 (189-230)||(3340591-3340632)
chr5 (66-126)||(4674965-4675025)
chr5 (63-127)||(18465556-18465620)
chr5 (190-229)||(13362777-13362816)
chr5 (187-230)||(20134200-20134243)
chr5 (187-230)||(20134399-20134442)
chr5 (187-230)||(20696327-20696370)
chr5 (187-230)||(22671997-22672040)
chr5 (185-236)||(23334706-23334756)
chr5 (190-229)||(25017236-25017275)
chr5 (190-229)||(28070172-28070211)
chr5 (187-230)||(35662068-35662111)
chr5 (187-230)||(35662233-35662276)
chr5 (187-230)||(39861580-39861623)
chr5 (187-229)||(22830788-22830830)
chr5 (187-229)||(23155843-23155885)
chr5 (61-127)||(23335707-23335772)
chr5 (194-236)||(23948588-23948630)
chr5 (187-228)||(5630271-5630312)
chr5 (189-230)||(11660794-11660835)
chr5 (189-230)||(16552248-16552289)
chr5 (185-222)||(16667667-16667704)
chr5 (191-236)||(25189817-25189862)
chr5 (197-230)||(25545582-25545615)
chr5 (189-230)||(39086518-39086559)
chr5 (188-229)||(39086707-39086748)
chr5 (187-232)||(39166150-39166195)
chr5 (189-230)||(39166342-39166383)
chr5 (189-229)||(703732-703772)
chr5 (187-230)||(15059633-15059677)
[»] chr2 (54 HSPs)
chr2 (61-236)||(8149831-8150010)
chr2 (61-236)||(8154455-8154634)
chr2 (61-246)||(39355035-39355224)
chr2 (61-237)||(7487140-7487320)
chr2 (61-236)||(15016453-15016632)
chr2 (61-236)||(1292066-1292245)
chr2 (63-234)||(34464713-34464888)
chr2 (61-197)||(9143585-9143725)
chr2 (61-140)||(2263573-2263652)
chr2 (59-122)||(18762865-18762928)
chr2 (64-122)||(41346045-41346103)
chr2 (177-236)||(18297163-18297222)
chr2 (52-129)||(25995277-25995354)
chr2 (61-129)||(36636935-36637003)
chr2 (189-237)||(41345081-41345129)
chr2 (63-129)||(5098718-5098784)
chr2 (61-127)||(18298111-18298176)
chr2 (177-230)||(25193981-25194034)
chr2 (65-129)||(13081858-13081922)
chr2 (68-107)||(21155441-21155480)
chr2 (68-107)||(27974291-27974330)
chr2 (68-107)||(28060820-28060859)
chr2 (187-230)||(31783794-31783837)
chr2 (187-230)||(34726605-34726648)
chr2 (188-230)||(20661397-20661439)
chr2 (61-127)||(20709774-20709839)
chr2 (61-127)||(25192892-25192957)
chr2 (189-230)||(24183599-24183640)
chr2 (189-229)||(19246664-19246704)
chr2 (77-129)||(39548058-39548110)
chr2 (60-127)||(4281788-4281855)
chr2 (187-230)||(16111705-16111748)
chr2 (190-229)||(18298130-18298169)
chr2 (187-230)||(20661595-20661638)
chr2 (187-230)||(22596305-22596348)
chr2 (187-230)||(22596504-22596547)
chr2 (190-229)||(25192899-25192938)
chr2 (187-230)||(31711511-31711554)
chr2 (187-230)||(34726796-34726839)
chr2 (66-121)||(40853685-40853740)
chr2 (187-230)||(42364693-42364736)
chr2 (187-230)||(44915491-44915534)
chr2 (75-129)||(16142073-16142127)
chr2 (189-230)||(12449055-12449096)
chr2 (189-230)||(12449245-12449286)
chr2 (62-127)||(14551319-14551382)
chr2 (189-230)||(25575324-25575365)
chr2 (189-230)||(31711701-31711741)
chr2 (189-230)||(37867155-37867196)
chr2 (189-230)||(37867357-37867398)
chr2 (189-230)||(42364493-42364534)
chr2 (185-222)||(43823873-43823910)
chr2 (187-223)||(15252847-15252883)
chr2 (198-230)||(31783996-31784028)
[»] chr3 (62 HSPs)
chr3 (61-238)||(19284671-19284852)
chr3 (61-236)||(3475294-3475473)
chr3 (61-237)||(9595866-9596046)
chr3 (61-236)||(26662425-26662604)
chr3 (61-236)||(9106267-9106446)
chr3 (61-236)||(30947798-30947977)
chr3 (60-236)||(46237645-46237825)
chr3 (61-236)||(2941813-2941992)
chr3 (60-236)||(10986351-10986531)
chr3 (61-236)||(47335032-47335216)
chr3 (61-236)||(6097571-6097750)
chr3 (61-237)||(54379163-54379342)
chr3 (62-236)||(33413899-33414078)
chr3 (65-236)||(26960630-26960805)
chr3 (237-329)||(11343090-11343182)
chr3 (64-122)||(41192355-41192413)
chr3 (64-122)||(51846785-51846843)
chr3 (177-237)||(19384375-19384435)
chr3 (177-229)||(50755182-50755234)
chr3 (188-238)||(34562392-34562442)
chr3 (64-122)||(34563352-34563410)
chr3 (59-129)||(51362436-51362505)
chr3 (183-236)||(8719133-8719186)
chr3 (183-236)||(9071020-9071073)
chr3 (61-130)||(51681999-51682068)
chr3 (61-129)||(19385313-19385380)
chr3 (61-129)||(47728388-47728456)
chr3 (65-129)||(53594972-53595036)
chr3 (60-127)||(8718100-8718166)
chr3 (60-127)||(9069987-9070053)
chr3 (177-236)||(51361518-51361577)
chr3 (60-120)||(23755284-23755344)
chr3 (187-230)||(8036801-8036844)
chr3 (187-230)||(36185905-36185948)
chr3 (187-230)||(50416481-50416524)
chr3 (187-230)||(50416564-50416607)
chr3 (61-127)||(7045300-7045365)
chr3 (187-236)||(16276664-16276713)
chr3 (188-229)||(47924367-47924408)
chr3 (187-239)||(8036989-8037041)
chr3 (60-124)||(23699326-23699390)
chr3 (60-124)||(23717781-23717845)
chr3 (60-124)||(23736237-23736301)
chr3 (197-241)||(27068522-27068566)
chr3 (189-229)||(27446215-27446255)
chr3 (188-236)||(41191404-41191452)
chr3 (63-127)||(50754008-50754071)
chr3 (187-230)||(12974013-12974056)
chr3 (187-230)||(12974191-12974233)
chr3 (187-230)||(19012562-19012605)
chr3 (190-229)||(19385334-19385373)
chr3 (63-118)||(32232993-32233048)
chr3 (187-230)||(36185727-36185770)
chr3 (190-229)||(51362457-51362496)
chr3 (88-127)||(52987650-52987689)
chr3 (61-123)||(1377781-1377842)
chr3 (199-233)||(17620734-17620768)
chr3 (61-127)||(28299952-28300018)
chr3 (187-229)||(47225848-47225890)
chr3 (187-228)||(21175268-21175309)
chr3 (189-229)||(8718108-8718148)
chr3 (189-229)||(9069995-9070035)
[»] chr4 (89 HSPs)
chr4 (61-233)||(13635615-13635791)
chr4 (61-237)||(27865623-27865803)
chr4 (61-236)||(11785974-11786153)
chr4 (61-236)||(11798141-11798320)
chr4 (61-236)||(15051023-15051202)
chr4 (61-232)||(30597699-30597874)
chr4 (61-236)||(49425944-49426123)
chr4 (59-236)||(49492399-49492580)
chr4 (58-236)||(53441317-53441499)
chr4 (61-222)||(51921166-51921331)
chr4 (61-236)||(46672439-46672617)
chr4 (61-197)||(1621875-1622016)
chr4 (61-220)||(35291451-35291614)
chr4 (61-211)||(55765481-55765635)
chr4 (60-205)||(36011842-36011991)
chr4 (63-140)||(38244946-38245023)
chr4 (61-133)||(10472497-10472569)
chr4 (61-140)||(26578176-26578255)
chr4 (177-234)||(50644660-50644717)
chr4 (177-236)||(45256885-45256944)
chr4 (61-129)||(25574126-25574194)
chr4 (177-228)||(638984-639035)
chr4 (64-127)||(1729615-1729678)
chr4 (185-236)||(30358835-30358886)
chr4 (64-118)||(20861583-20861637)
chr4 (64-122)||(30357810-30357868)
chr4 (65-122)||(38010145-38010202)
chr4 (177-236)||(10473638-10473697)
chr4 (185-236)||(22180201-22180252)
chr4 (177-235)||(26577257-26577315)
chr4 (187-232)||(25715642-25715687)
chr4 (187-232)||(54895583-54895628)
chr4 (65-129)||(16298925-16298989)
chr4 (188-236)||(21098133-21098181)
chr4 (63-123)||(24686574-24686634)
chr4 (61-129)||(50643743-50643810)
chr4 (68-107)||(805109-805148)
chr4 (187-230)||(8165763-8165806)
chr4 (187-230)||(17109918-17109961)
chr4 (187-230)||(21995671-21995714)
chr4 (187-230)||(30779344-30779387)
chr4 (187-230)||(36924242-36924285)
chr4 (187-230)||(37059712-37059755)
chr4 (60-127)||(45255974-45256040)
chr4 (187-230)||(53865243-53865286)
chr4 (188-230)||(1492673-1492715)
chr4 (61-127)||(26447412-26447477)
chr4 (61-127)||(27764240-27764305)
chr4 (188-230)||(33819692-33819734)
chr4 (65-127)||(36621701-36621762)
chr4 (189-230)||(2124345-2124386)
chr4 (189-230)||(6841822-6841863)
chr4 (188-229)||(8157290-8157331)
chr4 (64-129)||(22181243-22181307)
chr4 (189-230)||(31763110-31763151)
chr4 (187-228)||(36309419-36309460)
chr4 (177-230)||(51836328-51836381)
chr4 (187-230)||(2124545-2124588)
chr4 (88-127)||(4168384-4168423)
chr4 (187-230)||(12722938-12722981)
chr4 (187-230)||(17109720-17109763)
chr4 (190-229)||(22181264-22181303)
chr4 (187-230)||(25715727-25715770)
chr4 (190-229)||(27764247-27764286)
chr4 (190-229)||(36621720-36621759)
chr4 (187-230)||(43374448-43374491)
chr4 (190-229)||(45255982-45256021)
chr4 (190-229)||(50643750-50643789)
chr4 (188-227)||(51076901-51076940)
chr4 (187-230)||(54895405-54895448)
chr4 (187-237)||(1728619-1728669)
chr4 (63-129)||(29826604-29826669)
chr4 (187-229)||(33883483-33883525)
chr4 (188-230)||(36309618-36309660)
chr4 (191-237)||(55782641-55782687)
chr4 (191-237)||(55846821-55846867)
chr4 (189-230)||(562776-562817)
chr4 (189-230)||(1492863-1492904)
chr4 (189-230)||(9813147-9813188)
chr4 (189-230)||(31762930-31762971)
chr4 (189-230)||(33883295-33883336)
chr4 (189-230)||(38010712-38010753)
chr4 (189-230)||(43375523-43375564)
chr4 (185-222)||(48076921-48076958)
chr4 (191-236)||(50070714-50070759)
chr4 (91-127)||(637883-637919)
chr4 (187-230)||(12722738-12722782)
chr4 (191-235)||(14499247-14499291)
chr4 (190-226)||(26447431-26447467)
[»] scaffold0045 (1 HSPs)
scaffold0045 (61-236)||(33684-33863)
[»] scaffold0074 (2 HSPs)
scaffold0074 (61-236)||(24274-24453)
scaffold0074 (197-237)||(44776-44816)
[»] chr7 (49 HSPs)
chr7 (60-234)||(16933132-16933311)
chr7 (60-234)||(16938515-16938694)
chr7 (61-236)||(30884109-30884288)
chr7 (61-236)||(46358520-46358699)
chr7 (59-236)||(763695-763876)
chr7 (60-240)||(31660068-31660252)
chr7 (61-237)||(47340146-47340327)
chr7 (76-236)||(35736963-35737127)
chr7 (61-236)||(41910999-41911175)
chr7 (61-150)||(20000651-20000740)
chr7 (177-236)||(46572569-46572628)
chr7 (180-235)||(15973856-15973911)
chr7 (61-127)||(5757386-5757452)
chr7 (64-129)||(11732645-11732710)
chr7 (177-230)||(48692040-48692093)
chr7 (162-237)||(34228599-34228675)
chr7 (65-129)||(34875493-34875557)
chr7 (64-122)||(24359874-24359932)
chr7 (61-129)||(44141249-44141317)
chr7 (177-236)||(32685839-32685898)
chr7 (189-236)||(48830601-48830648)
chr7 (188-236)||(11732037-11732085)
chr7 (61-129)||(15974934-15975001)
chr7 (61-129)||(39007647-39007715)
chr7 (187-235)||(46025060-46025108)
chr7 (52-127)||(10555940-10556014)
chr7 (187-230)||(26945714-26945757)
chr7 (187-230)||(38837729-38837772)
chr7 (187-230)||(44426599-44426642)
chr7 (59-129)||(25778835-25778904)
chr7 (61-127)||(30428873-30428938)
chr7 (61-127)||(46024027-46024092)
chr7 (188-237)||(24360756-24360805)
chr7 (199-236)||(33798745-33798782)
chr7 (189-230)||(46004537-46004578)
chr7 (187-239)||(44426799-44426851)
chr7 (61-127)||(46573500-46573563)
chr7 (187-230)||(6620620-6620663)
chr7 (190-229)||(15974955-15974994)
chr7 (190-229)||(30428880-30428919)
chr7 (187-230)||(31365272-31365315)
chr7 (187-230)||(34227677-34227720)
chr7 (187-230)||(43742250-43742293)
chr7 (61-118)||(6797394-6797451)
chr7 (189-230)||(7845099-7845140)
chr7 (191-236)||(12286723-12286768)
chr7 (189-230)||(34227878-34227919)
chr7 (189-230)||(41065971-41066012)
chr7 (176-230)||(48306341-48306392)
[»] chr8 (63 HSPs)
chr8 (61-236)||(19784271-19784450)
chr8 (59-236)||(34633208-34633389)
chr8 (61-236)||(41099182-41099364)
chr8 (61-236)||(10237354-10237533)
chr8 (61-236)||(41451105-41451284)
chr8 (61-237)||(30413914-30414094)
chr8 (61-236)||(1149910-1150089)
chr8 (61-236)||(15227030-15227209)
chr8 (61-237)||(43690640-43690810)
chr8 (61-197)||(7857680-7857820)
chr8 (177-236)||(4835513-4835572)
chr8 (64-122)||(9852273-9852331)
chr8 (64-122)||(34648133-34648191)
chr8 (177-230)||(39657709-39657762)
chr8 (177-228)||(1209776-1209827)
chr8 (61-124)||(15260854-15260917)
chr8 (185-236)||(23397441-23397492)
chr8 (68-122)||(23396484-23396538)
chr8 (188-237)||(35301623-35301672)
chr8 (177-236)||(2751225-2751284)
chr8 (183-237)||(15259849-15259903)
chr8 (61-127)||(32987445-32987510)
chr8 (64-122)||(35302591-35302649)
chr8 (64-110)||(40023279-40023325)
chr8 (59-129)||(42433699-42433768)
chr8 (177-230)||(7059155-7059208)
chr8 (65-129)||(13526669-13526733)
chr8 (65-129)||(13616204-13616268)
chr8 (177-220)||(4840974-4841017)
chr8 (187-230)||(17792892-17792935)
chr8 (187-230)||(35448610-35448653)
chr8 (60-127)||(39021974-39022040)
chr8 (65-124)||(40247288-40247347)
chr8 (189-239)||(185873-185923)
chr8 (187-229)||(1672931-1672973)
chr8 (187-229)||(27506708-27506750)
chr8 (61-118)||(2522867-2522924)
chr8 (187-240)||(15808876-15808929)
chr8 (187-228)||(21120195-21120236)
chr8 (188-233)||(34647169-34647214)
chr8 (87-127)||(8550529-8550569)
chr8 (59-123)||(40012186-40012249)
chr8 (190-229)||(1208716-1208755)
chr8 (185-236)||(9853254-9853305)
chr8 (187-230)||(17656619-17656662)
chr8 (187-230)||(23567487-23567530)
chr8 (187-230)||(23567643-23567686)
chr8 (190-229)||(32987464-32987503)
chr8 (190-229)||(39021982-39022021)
chr8 (61-127)||(1208709-1208774)
chr8 (65-111)||(10443586-10443632)
chr8 (188-230)||(10585861-10585903)
chr8 (61-127)||(12355422-12355488)
chr8 (188-230)||(18757329-18757371)
chr8 (191-229)||(42433708-42433746)
chr8 (191-237)||(42434566-42434612)
chr8 (90-127)||(4836701-4836738)
chr8 (90-127)||(4842146-4842183)
chr8 (189-230)||(10586063-10586104)
chr8 (189-230)||(15809842-15809883)
chr8 (189-230)||(24473246-24473287)
chr8 (65-129)||(28698578-28698643)
chr8 (200-233)||(40022386-40022419)
[»] scaffold0581 (1 HSPs)
scaffold0581 (61-211)||(8333-8487)
[»] scaffold0571 (2 HSPs)
scaffold0571 (61-142)||(661-742)
scaffold0571 (141-236)||(540-639)
[»] scaffold0338 (1 HSPs)
scaffold0338 (177-229)||(6503-6555)
[»] scaffold0238 (2 HSPs)
scaffold0238 (61-129)||(25230-25297)
scaffold0238 (190-229)||(25251-25290)
[»] scaffold0516 (1 HSPs)
scaffold0516 (187-230)||(1248-1291)
[»] scaffold0249 (2 HSPs)
scaffold0249 (187-230)||(23545-23588)
scaffold0249 (188-228)||(23736-23776)
[»] scaffold0102 (1 HSPs)
scaffold0102 (188-230)||(33617-33659)
[»] scaffold0097 (1 HSPs)
scaffold0097 (61-127)||(13613-13678)
[»] scaffold0050 (2 HSPs)
scaffold0050 (61-127)||(18980-19045)
scaffold0050 (191-234)||(20974-21017)
[»] scaffold0544 (1 HSPs)
scaffold0544 (62-127)||(10675-10739)
[»] scaffold0129 (1 HSPs)
scaffold0129 (189-230)||(20122-20163)
[»] scaffold0019 (1 HSPs)
scaffold0019 (61-122)||(164058-164118)
[»] scaffold0009 (2 HSPs)
scaffold0009 (187-228)||(51908-51949)
scaffold0009 (185-230)||(202913-202958)
[»] scaffold0194 (1 HSPs)
scaffold0194 (185-236)||(28673-28724)
[»] scaffold0558 (2 HSPs)
scaffold0558 (62-123)||(2448-2508)
scaffold0558 (62-123)||(5860-5920)
[»] scaffold0460 (1 HSPs)
scaffold0460 (61-118)||(1604-1661)
[»] scaffold0221 (1 HSPs)
scaffold0221 (191-236)||(20479-20524)
[»] scaffold0189 (1 HSPs)
scaffold0189 (60-129)||(11188-11256)
[»] scaffold0006 (1 HSPs)
scaffold0006 (61-118)||(209326-209383)
[»] scaffold0004 (1 HSPs)
scaffold0004 (188-229)||(96001-96042)


Alignment Details
Target: chr1 (Bit Score: 137; Significance: 2e-71; HSPs: 72)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 59 - 236
Target Start/End: Complemental strand, 20434790 - 20434609
Alignment:
Q  59 agggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgac 158  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||||||||| |    
T  20434790 agggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccattagatttctttcattttgaacaaaaatgattttggc 20434691  T
Q  159 tcactttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||||| ||||||    ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  20434690 tcactttgggggtgtaggaagcaattatgttgggatttatgcatggtgcataatgatttccttatgcaccataaccactccc 20434609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 61 - 233
Target Start/End: Complemental strand, 49937003 - 49936827
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  49937003 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatgattttggctc 49936904  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccact 233  Q
    ||||||||| ||||||    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  49936903 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccact 49936827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 61 - 240
Target Start/End: Original strand, 24635926 - 24636109
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||    
T  24635926 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 24636025  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccccctt 240  Q
    ||||||||| ||||||    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  24636026 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccccctt 24636109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 56 - 237
Target Start/End: Original strand, 43452537 - 43452722
Alignment:
Q  56 tatagggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgatttt 155  Q
    |||| ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||| ||||    
T  43452537 tatatggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaactatcagatttcttttattttgaacaaaaatggtttt 43452636  T
Q  156 gactcactttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactcccc 237  Q
    | |||||||||||| ||||||    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  43452637 ggctcactttgggggtgtaggaaacaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactcccc 43452722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 61 - 237
Target Start/End: Complemental strand, 25889094 - 25888915
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||    
T  25889094 ggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 25888995  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactcccc 237  Q
    ||||||||| ||||||    ||||||||| ||||||||||| ||||||| |||| ||||||||||||||||||||||||||    
T  25888994 actttgggggtgtaggaagcaattatgttaggatttatgcacggtgcataagga-ttccttatgcaccataaccactcccc 25888915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 61 - 236
Target Start/End: Complemental strand, 19897826 - 19897647
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||    
T  19897826 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacatatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 19897727  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||| | ||||||    |||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||||    
T  19897726 actttggaggtgtaggaagcaattatgttgggatttctgcacggtgcataaggatttccttatgcaccataaccactccc 19897647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 61 - 236
Target Start/End: Complemental strand, 48762397 - 48762218
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||| |||||||||| |||||||||||||||| ||||| |||    
T  48762397 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccattagatttcttttattttgaacaaaaatggttttggctc 48762298  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||| ||| ||||||    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  48762297 actttaggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 48762218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 61 - 237
Target Start/End: Original strand, 6314115 - 6314296
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaac-aaaaatgattttgact 159  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||||||| ||||||||| ||||||| ||||| ||    
T  6314115 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacagccatcaaatttctttcattttgaacaaaaaatggttttggct 6314214  T
Q  160 cactttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactcccc 237  Q
    |||||||||||||||||    ||||||||||||||||||  | ||||||| |||||||||||||||||||||||||||||||    
T  6314215 cactttggggatgtaggaagcaattatgttgggatttatatacggtgcataaggatttccttatgcaccataaccactcccc 6314296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 61 - 236
Target Start/End: Original strand, 16975954 - 16976134
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaac-aaaaatgattttgact 159  Q
    ||||||||||||||| ||||||  |||||||||||||||||  |||||||||||||||||||||||||||||| ||||||||| ||||||| ||||| ||    
T  16975954 ggcaaaagttatggttcataagttatttccttatgcaccgtgtataaacacatcacaaccatcagatttcttttattttgaacaaaaaatggttttggct 16976053  T
Q  160 cactttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    |||||||||| ||||||    ||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  16976054 cactttgggggtgtaggaagcaattatgttaggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 16976134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 61 - 236
Target Start/End: Original strand, 18618835 - 18619013
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    |||||||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||  ||||| |||    
T  18618835 ggcaaaagttatggtgcataaattatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaattgttttggctc 18618934  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||| ||||||    ||||||||||||||||||||| ||||||| |||| |||||||||||||||||| ||||||    
T  18618935 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataagga-ttccttatgcaccataactactccc 18619013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 61 - 210
Target Start/End: Original strand, 50351803 - 50351956
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||| | |||||||||||||||| || || |||    
T  50351803 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctatcattttgaacaaaaatggttatggctc 50351902  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgagga 210  Q
    ||||||||| ||||||    ||||||||||||||||||||| ||||||| ||||    
T  50351903 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataagga 50351956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 60 - 164
Target Start/End: Original strand, 28375463 - 28375567
Alignment:
Q  60 gggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgact 159  Q
    |||||||||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||| ||| ||||| |||||||||  ||||||||    
T  28375463 gggcaaaagttatggtgcataagttatttctttatgcaccgtgcataaacacatcacaaccatcagattttttttattttaaacaaaaatagttttgact 28375562  T
Q  160 cactt 164  Q
    |||||    
T  28375563 cactt 28375567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 56 - 140
Target Start/End: Original strand, 34369655 - 34369739
Alignment:
Q  56 tatagggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttg 140  Q
    |||||||||||| |||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  34369655 tatagggcaaaaattatggtgcataagccattttcttatgcaccgtgcataaacacttcacaaccatcagatttctttcattttg 34369739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 4097974 - 4097895
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttg 140  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||| |||||||||||| |||||||| ||||||    
T  4097974 ggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacttcacaaccatcaaatttctttcattttg 4097895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 138
Target Start/End: Original strand, 11421594 - 11421671
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattt 138  Q
    |||||||||||||||||||||  |||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||    
T  11421594 ggcaaaagttatggtgcataaatcatttccttatgcaccgtgcataaacacttcacaaccatcagatttctttcattt 11421671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 64 - 140
Target Start/End: Complemental strand, 23175585 - 23175509
Alignment:
Q  64 aaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttg 140  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||| |||||||| ||||||    
T  23175585 aaaagttatggtgcataagccatttccttatgcgccgtgcataaacacttcacaaccatcaaatttctttcattttg 23175509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 23817430 - 23817489
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  23817430 aattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 23817489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 21256835 - 21256777
Alignment:
Q  64 aaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccat 122  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||    
T  21256835 aaaagttatggtgcataagccattttcttatgcaccgtgcataaacacttcacaaccat 21256777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 23921025 - 23920965
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactcccc 237  Q
    ||||||||||||||||||||| | ||||| |||||||||||||||||||||||| ||||||    
T  23921025 aattatgttgggatttatgcacgatgcataaggatttccttatgcaccataaccgctcccc 23920965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 31529727 - 31529663
Alignment:
Q  65 aaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    ||||||||  ||||||||||||||||||||||||| | ||||||||| |||||||||||||||||    
T  31529727 aaagttattatgcataagccatttccttatgcaccatgcataaacacttcacaaccatcagattt 31529663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 31083365 - 31083423
Alignment:
Q  64 aaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccat 122  Q
    |||||||||||||||||||||||||||||||| ||| | ||||||||| ||||||||||    
T  31083365 aaaagttatggtgcataagccatttccttatgtaccattcataaacacttcacaaccat 31083423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 37639341 - 37639407
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||||  |||||||| |||||||||||||||| | ||||||||| |||||||||||||||    
T  37639341 ggcaaaagttattatgcataagacatttccttatgcaccctgcataaacacttcacaaccatcagat 37639407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 21255886 - 21255834
Alignment:
Q  185 tgggatttatgcatggtgcatgaggatttccttatgcaccataaccactcccc 237  Q
    ||||||||||||| |||| || |||||||||||||||||||||||||||||||    
T  21255886 tgggatttatgcacggtgtataaggatttccttatgcaccataaccactcccc 21255834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 33097409 - 33097473
Alignment:
Q  65 aaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    ||||||||  |||||||| |||||||||||||||| | ||||||||| |||||||||||||||||    
T  33097409 aaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatcagattt 33097473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 11422560 - 11422619
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||||| ||||||||| | ||||| |||||||||||||||||||||||| |||||    
T  11422560 aattatgttggaatttatgcacgatgcataaggatttccttatgcaccataaccgctccc 11422619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 21641648 - 21641589
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    |||||||||||||||| |||| ||||||| |||||||||||||||| ||||||| |||||    
T  21641648 aattatgttgggatttgtgcacggtgcataaggatttccttatgcagcataaccgctccc 21641589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 177 - 239
Target Start/End: Original strand, 180843 - 180905
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccccct 239  Q
    |||||||||||||||||| || ||||||| |||||||| |||| |||||||||| ||||||||    
T  180843 aattatgttgggatttatacacggtgcataaggatttctttatacaccataaccgctccccct 180905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 18056784 - 18056849
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||||||||||||||  | | ||||||||||||| ||||||||| |||||||||||||||    
T  18056784 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagat 18056849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 35198247 - 35198181
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||||  |||||||| |||||||||||||||| | ||||||||| ||||| |||||||||    
T  35198247 ggcaaaagttattatgcataagacatttccttatgcaccctgcataaacacttcacagccatcagat 35198181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 1395353 - 1395394
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  1395353 atttatgcatggtgcataaggatttccttatgcaccataacc 1395394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 17893116 - 17893071
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataaccac 232  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  17893116 ggatttatgcagggtgcataaggatttccttatgcaccataaccac 17893071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 23174456 - 23174403
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||||||||||||| ||||||| || |||| ||||||||||||||||    
T  23174456 aattatgttgggatttatgcacggtgcataagaattttcttatgcaccataacc 23174403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 41033262 - 41033322
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccat 122  Q
    ||||||||||||||||||||||  ||||||||||||||| |||||||| | |||||||||||    
T  41033262 ggcaaaagttatggtgcataagg-atttccttatgcaccatacataaagaaatcacaaccat 41033322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 65 - 126
Target Start/End: Complemental strand, 51801795 - 51801734
Alignment:
Q  65 aaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcaga 126  Q
    ||||||||  |||||||| |||||||||||||||| | ||||||||| ||||||||||||||    
T  51801795 aaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatcaga 51801734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 44260522 - 44260586
Alignment:
Q  65 aaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    ||||||||  ||| |||| |||||||||||||||| | ||||||||| |||||||||||||||||    
T  44260522 aaagttattatgcgtaagtcatttccttatgcaccctgcataaacacttcacaaccatcagattt 44260586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 44688672 - 44688608
Alignment:
Q  65 aaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    ||||||||  |||||||| |||||||||||||||  | ||||||||| |||||||||||||||||    
T  44688672 aaagttatcatgcataagtcatttccttatgcacgctgcataaacacttcacaaccatcagattt 44688608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 4097163 - 4097105
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||||||||||| ||| ||||||| |||| ||||||||||||||||||| |||||    
T  4097163 aattatgttgggatttaagcacggtgcataagga-ttccttatgcaccataaccgctccc 4097105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 9628599 - 9628642
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  9628599 ggatttatgcagggtgcataaggatttccttatgcaccataacc 9628642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 18057807 - 18057858
Alignment:
Q  185 tgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||| |||||    
T  18057807 tgggatttatgcacggtgcataaggatttccttatacaccataaccgctccc 18057858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 31084404 - 31084451
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||||||||    
T  31084404 atttatgcacggtacataaggatttccttatgcaccataaccactccc 31084451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 33157036 - 33156993
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  33157036 ggatttatgcagggtgcataaggatttccttatgcaccataacc 33156993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 107
Target Start/End: Complemental strand, 37228403 - 37228364
Alignment:
Q  68 gttatggtgcataagccatttccttatgcaccgtacataa 107  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  37228403 gttatggtgcataagccatttccttatgcaccgtgcataa 37228364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 42134133 - 42134176
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  42134133 ggatttatgcagggtgcataaggatttccttatgcaccataacc 42134176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 20507344 - 20507286
Alignment:
Q  64 aaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccat 122  Q
    ||||||||||||||||||||||||||||||||||  || |||||| |  ||||||||||    
T  20507344 aaaagttatggtgcataagccatttccttatgcattgtgcataaatatttcacaaccat 20507286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 10974675 - 10974634
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  10974675 atttatgcagggtgcataaggatttccttatgcaccataacc 10974634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 14229214 - 14229173
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  14229214 atttatgcagggtgcataaggatttccttatgcaccataacc 14229173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 17893275 - 17893316
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  17893275 atttatgcagggtgcataaggatttccttatgcaccataacc 17893316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 60 - 129
Target Start/End: Complemental strand, 28323399 - 28323330
Alignment:
Q  60 gggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    |||||||||||||  |||||||| |||||  ||||||||| | |||||||||  ||||||||||||||||    
T  28323399 gggcaaaagttattatgcataagtcatttttttatgcaccctccataaacactacacaaccatcagattt 28323330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 45849152 - 45849111
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataa 228  Q
    ||||||||||| ||||||| ||||||||||||||||||||||    
T  45849152 ggatttatgcagggtgcataaggatttccttatgcaccataa 45849111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 232
Target Start/End: Original strand, 32595284 - 32595328
Alignment:
Q  188 gatttatgcatggtgcatgaggatttccttatgcaccataaccac 232  Q
    |||||| ||| ||||||| ||||||||||||||||||||||||||    
T  32595284 gatttaagcagggtgcataaggatttccttatgcaccataaccac 32595328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 230
Target Start/End: Original strand, 9041055 - 9041094
Alignment:
Q  191 ttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||| ||||||| ||||||||||||||||||||||||    
T  9041055 ttatgcagggtgcataaggatttccttatgcaccataacc 9041094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 12796467 - 12796424
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||    
T  12796467 ggatttatgcaaggtgcagaaggatttccttatgcaccataacc 12796424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 14229361 - 14229404
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| | ||||||||||||||||||||||    
T  14229361 ggatttatgcagggtgcataaagatttccttatgcaccataacc 14229404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 18056830 - 18056791
Alignment:
Q  190 tttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  18056830 tttatgcacggtgcataaggatttccttatgcaccataac 18056791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 226
Target Start/End: Complemental strand, 18928822 - 18928783
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccat 226  Q
    ||||||||||| ||||||| ||||||||||||||||||||    
T  18928822 ggatttatgcagggtgcataaggatttccttatgcaccat 18928783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 18928955 - 18928998
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| | ||||||||||||||||||||||    
T  18928955 ggatttatgcagggtgcataaagatttccttatgcaccataacc 18928998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 124
Target Start/End: Original strand, 22348039 - 22348101
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatca 124  Q
    ||||||||||||||||||||||  | | ||||||||||||  ||||||||| ||||||||||||    
T  22348039 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgcgcataaacacttcacaaccatca 22348101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 31763973 - 31764016
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| | ||||||| ||||||||||||||||||||||||    
T  31763973 ggatttatgtagggtgcataaggatttccttatgcaccataacc 31764016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 32595148 - 32595105
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| || |||||||||||||||||||||    
T  32595148 ggatttatgcagggtgcataagaatttccttatgcaccataacc 32595105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 68 - 107
Target Start/End: Complemental strand, 41033985 - 41033946
Alignment:
Q  68 gttatggtgcataagccatttccttatgcaccgtacataa 107  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  41033985 gttatggtgcataagtcatttccttatgcaccgtgcataa 41033946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 32143770 - 32143812
Alignment:
Q  188 gatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||  |||||| ||||||||||||||||||||||||    
T  32143770 gatttatgcagagtgcataaggatttccttatgcaccataacc 32143812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 230
Target Start/End: Complemental strand, 42133987 - 42133945
Alignment:
Q  188 gatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    |||||||||| | ||||| ||||||||||||||||||||||||    
T  42133987 gatttatgcaggatgcataaggatttccttatgcaccataacc 42133945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 12070612 - 12070653
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| ||||||| || |||||||||||||||||||||    
T  12070612 atttatgcagggtgcataagaatttccttatgcaccataacc 12070653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 15990734 - 15990689
Alignment:
Q  191 ttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||||||||| ||||  |||||||||| |||||||||||||    
T  15990734 ttatgcatggtgcataaggaaatccttatgcatcataaccactccc 15990689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 17811285 - 17811326
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    |||||| || ||||||| ||||||||||||||||||||||||    
T  17811285 atttatacagggtgcataaggatttccttatgcaccataacc 17811326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 29945418 - 29945459
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    |||||||||  |||||| ||||||||||||||||||||||||    
T  29945418 atttatgcagagtgcataaggatttccttatgcaccataacc 29945459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 31763817 - 31763776
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| |||| || ||||||||||||||||||||||||    
T  31763817 atttatgcagggtgtataaggatttccttatgcaccataacc 31763776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 45849309 - 45849350
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataa 228  Q
    ||||||||||| ||||||| || |||||||||||||||||||    
T  45849309 ggatttatgcagggtgcataagaatttccttatgcaccataa 45849350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 13590469 - 13590517
Alignment:
Q  63 caaaagttatggtgcataagccatttccttatgcaccgtacataaacac 111  Q
    ||||||||||  |||||||| |||||||||||||||| | |||||||||    
T  13590469 caaaagttattatgcataagtcatttccttatgcaccctgcataaacac 13590517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 223
Target Start/End: Complemental strand, 14389888 - 14389852
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcac 223  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  14389888 ggatttatgcagggtgcataaggatttccttatgcac 14389852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 88 - 124
Target Start/End: Original strand, 16115877 - 16115913
Alignment:
Q  88 tccttatgcaccgtacataaacacatcacaaccatca 124  Q
    |||||||||||||| ||||||||| ||||||||||||    
T  16115877 tccttatgcaccgtgcataaacacttcacaaccatca 16115913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 208 - 236
Target Start/End: Complemental strand, 23277012 - 23276984
Alignment:
Q  208 ggatttccttatgcaccataaccactccc 236  Q
    |||||||||||||||||||||||||||||    
T  23277012 ggatttccttatgcaccataaccactccc 23276984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 136; Significance: 7e-71; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 136; E-Value: 7e-71
Query Start/End: Original strand, 61 - 237
Target Start/End: Original strand, 1449542 - 1449722
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||    
T  1449542 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggctc 1449641  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactcccc 237  Q
    ||||||||| ||||||    ||||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||    
T  1449642 actttgggggtgtaggaaacaattatgttgggatttatgcacggtgcataaggattttcttatgcaccataaccactcccc 1449722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 61 - 238
Target Start/End: Original strand, 15493174 - 15493355
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||||| |||||||||| |||||||||||||||| ||||| |||    
T  15493174 ggcaaaagttatggtgcataagccatttccttatgtaccgtgcataaacacatcataaccattagatttcttttattttgaacaaaaatggttttggctc 15493273  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccccc 238  Q
    ||||||||| ||||||    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  15493274 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccccc 15493355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 65 - 236
Target Start/End: Original strand, 6900807 - 6900982
Alignment:
Q  65 aaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactcactt 164  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||    
T  6900807 aaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctcactt 6900906  T
Q  165 tggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||| ||||||    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  6900907 tgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 6900982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 61 - 236
Target Start/End: Original strand, 7089082 - 7089261
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||| ||||| |||    
T  7089082 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaatcatcagatttcttttattttgaacaaaaatggttttggctc 7089181  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||| ||||||    ||||||||||||||||||||| ||| ||| ||||||||||||||||||||||||||||||    
T  7089182 actttgggggtgtaggaagcaattatgttgggatttatgcacggtacataaggatttccttatgcaccataaccactccc 7089261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 61 - 236
Target Start/End: Original strand, 31216662 - 31216841
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||    
T  31216662 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttttggctc 31216761  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||| ||| ||||||    ||||||||||| |||||| || ||| ||| || |||||||||||||||||||||| ||||    
T  31216762 actttaggggtgtaggaagcaattatgttggaatttatacacggtccataagaatttccttatgcaccataaccattccc 31216841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 61 - 205
Target Start/End: Complemental strand, 1536962 - 1536814
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||| |||    
T  1536962 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttttggctc 1536863  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcat 205  Q
     |||||||| ||||||    |||||| |||||||||||||| |||||||    
T  1536862 gctttgggggtgtaggaagcaattatattgggatttatgcacggtgcat 1536814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 62 - 142
Target Start/End: Complemental strand, 34870151 - 34870071
Alignment:
Q  62 gcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaa 142  Q
    |||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||| ||||||||    
T  34870151 gcaaaagttatggtgcataagccatttccttatgcaccatgtataaacacatcacaaccatcagatttctttcattttgaa 34870071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 141 - 236
Target Start/End: Complemental strand, 34870049 - 34869950
Alignment:
Q  141 aacaaaaatgattttgactcactttggggatgtaggaa----ttatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    |||||||||| |||||  ||||||||| | ||||||||    ||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  34870049 aacaaaaatggttttggttcactttggaggtgtaggaagcaattatgttaggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 34869950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 30908655 - 30908713
Alignment:
Q  64 aaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccat 122  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||    
T  30908655 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacttcacaaccat 30908713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 878380 - 878439
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||||||||||||||| ||| ||| |||||||||||||||||||||||| |||||    
T  878380 aattatgttgggatttatgcacggtacataaggatttccttatgcaccataaccgctccc 878439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 35119237 - 35119300
Alignment:
Q  59 agggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||||||||||||||||     |||||||||||||| ||||||||| |||||||||||||||    
T  35119237 agggcaaaagttatggtgcataag-----tccttatgcaccgtgcataaacacttcacaaccatcagat 35119300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 7765406 - 7765453
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  7765406 atttatgcacggtgcataaggatttccttatgcaccataaccactccc 7765453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 18 - 60
Target Start/End: Complemental strand, 4621845 - 4621803
Alignment:
Q  18 atattgattcttgatttgttggatttaaagctatgatttatag 60  Q
    ||||||||||||||||||||||||| |||||||||||||||||    
T  4621845 atattgattcttgatttgttggattaaaagctatgatttatag 4621803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 234
Target Start/End: Original strand, 30909437 - 30909486
Alignment:
Q  185 tgggatttatgcatggtgcatgaggatttccttatgcaccataaccactc 234  Q
    ||||||||||||| ||||||| |||| |||||||||||||||||||||||    
T  30909437 tgggatttatgcacggtgcataaggaattccttatgcaccataaccactc 30909486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 59 - 124
Target Start/End: Complemental strand, 33346438 - 33346374
Alignment:
Q  59 agggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatca 124  Q
    ||||||||||||||||||||||||  | | ||||||||||||| ||||||||| ||||||||||||    
T  33346438 agggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatca 33346374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 64 - 119
Target Start/End: Original strand, 7764444 - 7764499
Alignment:
Q  64 aaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaac 119  Q
    ||||||||||||||||||||||||| ||||||| ||||  |||||||| |||||||    
T  7764444 aaaagttatggtgcataagccattttcttatgcgccgtgtataaacacttcacaac 7764499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 191 - 237
Target Start/End: Complemental strand, 18755703 - 18755657
Alignment:
Q  191 ttatgcatggtgcatgaggatttccttatgcaccataaccactcccc 237  Q
    |||||||  |||||| |||||||||||||||||||||||||||||||    
T  18755703 ttatgcaccgtgcataaggatttccttatgcaccataaccactcccc 18755657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 230
Target Start/End: Complemental strand, 19284414 - 19284372
Alignment:
Q  188 gatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    |||||||||| ||||||| ||||||||||||||||||||||||    
T  19284414 gatttatgcagggtgcataaggatttccttatgcaccataacc 19284372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 21384990 - 21385032
Alignment:
Q  188 gatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    |||||||||| ||||||| ||||||||||||||||||||||||    
T  21384990 gatttatgcagggtgcataaggatttccttatgcaccataacc 21385032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 34399641 - 34399706
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||||||||||||||  | | |||||||||||||| |||||||| |||||| ||||||||    
T  34399641 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtatataaacacttcacaatcatcagat 34399706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 10588955 - 10588996
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  10588955 atttatgcagggtgcataaggatttccttatgcaccataacc 10588996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 229
Target Start/End: Original strand, 15034992 - 15035033
Alignment:
Q  188 gatttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    |||||||||| ||||||| |||||||||||||||||||||||    
T  15034992 gatttatgcacggtgcataaggatttccttatgcaccataac 15035033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 22857530 - 22857489
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  22857530 atttatgcagggtgcataaggatttccttatgcaccataacc 22857489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 18611190 - 18611254
Alignment:
Q  63 caaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||  |||||||| |||||| ||||||||  | ||||||||| |||||||||||||||    
T  18611190 caaaagttattatgcataagacatttctttatgcactctgcataaacacttcacaaccatcagat 18611254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 12394399 - 12394438
Alignment:
Q  190 tttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  12394399 tttatgcacggtgcataaggatttccttatgcaccataac 12394438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 14237822 - 14237779
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| | ||||||| ||||||||||||||||||||||||    
T  14237822 ggatttatgtagggtgcataaggatttccttatgcaccataacc 14237779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 189 - 232
Target Start/End: Original strand, 20522850 - 20522893
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataaccac 232  Q
    ||||||| | ||||||| ||||||||||||||||||||||||||    
T  20522850 atttatgtagggtgcataaggatttccttatgcaccataaccac 20522893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 22857677 - 22857720
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||| ||||||||||||||||    
T  22857677 ggatttatgcagggtgcataaggattttcttatgcaccataacc 22857720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 25119470 - 25119513
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||    
T  25119470 ggatttatgcaggctgcataaggatttccttatgcaccataacc 25119513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 33346390 - 33346429
Alignment:
Q  190 tttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  33346390 tttatgcacggtgcataaggatttccttatgcaccataac 33346429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 4338672 - 4338618
Alignment:
Q  75 tgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    |||||||||||||| |||||||||| | ||||||||| ||| || ||||||||||    
T  4338672 tgcataagccattttcttatgcaccctgcataaacacttcaaaatcatcagattt 4338618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 230
Target Start/End: Complemental strand, 10698620 - 10698578
Alignment:
Q  188 gatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    |||||||||| ||||||  ||||||||||||||||||||||||    
T  10698620 gatttatgcagggtgcacaaggatttccttatgcaccataacc 10698578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 16968075 - 16968021
Alignment:
Q  75 tgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    |||||||||||||| |||||||||| | ||||||||| ||| |||||||| ||||    
T  16968075 tgcataagccattttcttatgcaccctgcataaacacttcataaccatcaaattt 16968021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 19281325 - 19281284
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| ||||||  ||||||||||||||||||||||||    
T  19281325 atttatgcagggtgcacaaggatttccttatgcaccataacc 19281284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 25119148 - 25119107
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| ||||||| || |||||||||||||||||||||    
T  25119148 atttatgcagggtgcataagaatttccttatgcaccataacc 25119107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 64 - 120
Target Start/End: Complemental strand, 12394442 - 12394387
Alignment:
Q  64 aaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaacc 120  Q
    |||||||||||||||||||  | | ||||||||||||| ||||||||| ||||||||    
T  12394442 aaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaacc 12394387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 66 - 118
Target Start/End: Complemental strand, 27079991 - 27079939
Alignment:
Q  66 aagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaa 118  Q
    |||||||  |||||||| ||||| |||||||||||| ||||||||| ||||||    
T  27079991 aagttattatgcataagtcattttcttatgcaccgtgcataaacacttcacaa 27079939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 3e-70; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 61 - 236
Target Start/End: Original strand, 37456680 - 37456859
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||| |||    
T  37456680 ggcaaaagttatggtgcatgagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttcattttgaacaaaaatagttttggctc 37456779  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||| ||||||    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  37456780 actttgggggtgtaggaagcaattatgttgggatttatgcatggtgcataaggatttccttatgcaccataaccactccc 37456859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 61 - 236
Target Start/End: Complemental strand, 26637903 - 26637724
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||    
T  26637903 ggcaaaagttatggtgcataagccattttcttatgcaccgtgcataaacacatcacaaccatcagatttctttaattttgaacaaaaatggttttggctc 26637804  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||| ||| ||||||    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  26637803 actttaggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 26637724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 59 - 239
Target Start/End: Original strand, 14394466 - 14394650
Alignment:
Q  59 agggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgac 158  Q
    ||||||||||||||||||||||||  ||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||| ||||||| ||||| |    
T  14394466 agggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaatacatcacaaccatcagatttcttttattttgaataaaaatggttttggc 14394565  T
Q  159 tcactttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccccct 239  Q
    ||||||||||| ||||||    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  14394566 tcactttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccccct 14394650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 65 - 236
Target Start/End: Complemental strand, 14940418 - 14940243
Alignment:
Q  65 aaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactcactt 164  Q
    ||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||    
T  14940418 aaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctcactt 14940319  T
Q  165 tggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||| ||||||    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  14940318 tgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 14940243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 60 - 237
Target Start/End: Complemental strand, 3884102 - 3883921
Alignment:
Q  60 gggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgact 159  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||| |||||||| |||||||||||||||| ||||| ||    
T  3884102 gggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacattacaaccatcaaatttctttcattttgaacaaaaatggttttggct 3884003  T
Q  160 cactttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactcccc 237  Q
    |||||||| | ||||||    |||||| |||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  3884002 cactttggaggtgtaggaagcaattatattgggatttatgcacggtgcataaggatttccttatgcaccataaccactcccc 3883921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 61 - 236
Target Start/End: Original strand, 15416664 - 15416843
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||    
T  15416664 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 15416763  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||  ||||||    ||| ||||||||||||||||| ||||||| |||||||||||||||| |||||||||||||    
T  15416764 actttgggagtgtaggaagcaatcatgttgggatttatgcacggtgcataaggatttccttatgcatcataaccactccc 15416843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 61 - 236
Target Start/End: Original strand, 13552983 - 13553162
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  13552983 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 13553082  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||  | ||||||    |||||| || |||||||| || ||||||| ||||||||||||||||||||||||||||||    
T  13553083 actttgaaggtgtaggaagcaattatattaggatttatacacggtgcataaggatttccttatgcaccataaccactccc 13553162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 60 - 142
Target Start/End: Original strand, 30783434 - 30783516
Alignment:
Q  60 gggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaa 142  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||    
T  30783434 gggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcgcaaccatcagatttctttcattttgaa 30783516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 141 - 236
Target Start/End: Original strand, 30783538 - 30783636
Alignment:
Q  141 aacaaaaatgattttgactcactttggggatgtaggaa----ttatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    |||||||||| ||||| |||||||||||| ||||||||    ||||||||| ||||||||| ||||||| |||||||||||||||| |||||||||||||    
T  30783538 aacaaaaatggttttggctcactttgggggtgtaggaagcaattatgttgg-atttatgcacggtgcataaggatttccttatgcatcataaccactccc 30783636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 129
Target Start/End: Complemental strand, 16552707 - 16552637
Alignment:
Q  59 agggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    ||||||||||||||  |||||||| |||||||||||||||| | ||||||||| |||||||||||| ||||    
T  16552707 agggcaaaagttattatgcataagtcatttccttatgcaccatgcataaacacttcacaaccatcatattt 16552637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 129
Target Start/End: Original strand, 33868153 - 33868223
Alignment:
Q  59 agggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    ||||||||||||||  |||||||| |||||||||||||||| | ||||||||| ||||||||||| |||||    
T  33868153 agggcaaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatctgattt 33868223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 63 - 127
Target Start/End: Complemental strand, 16668858 - 16668794
Alignment:
Q  63 caaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||  |||||||| |||||||||||||||| | ||||||||| |||||||||||||||    
T  16668858 caaaagttattatgcataagacatttccttatgcaccctgcataaacacttcacaaccatcagat 16668794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 15559091 - 15559050
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  15559091 atttatgcatggtgcataaggatttccttatgcaccataacc 15559050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 13362772 - 13362835
Alignment:
Q  63 caaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||||||||||||  | | ||||||||||||| ||||||||| |||||||||||||||    
T  13362772 caaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagat 13362835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 63 - 127
Target Start/End: Complemental strand, 25017280 - 25017217
Alignment:
Q  63 caaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||||||||||||  | | ||||||||||||| ||||||||| |||||||||||||||    
T  25017280 caaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagat 25017217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 28069301 - 28069241
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactcccc 237  Q
    ||||||||||| ||||||||  ||||||| ||||||||||||| |||||||||| ||||||    
T  28069301 aattatgttggaatttatgctcggtgcataaggatttccttatacaccataaccgctcccc 28069241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 11660982 - 11661025
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  11660982 ggatttatgcagggtgcataaggatttccttatgcaccataacc 11661025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 22695540 - 22695583
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  22695540 ggatttatgcaaggtgcataaggatttccttatgcaccataacc 22695583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 232
Target Start/End: Complemental strand, 23155567 - 23155524
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataaccac 232  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||    
T  23155567 atttatgcagggtgcataaggatttccttatgcaccataaccac 23155524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 189 - 232
Target Start/End: Original strand, 25671290 - 25671333
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataaccac 232  Q
    ||||||||||||| ||| ||||||||||||||||||||||||||    
T  25671290 atttatgcatggtacataaggatttccttatgcaccataaccac 25671333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 39861780 - 39861823
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  39861780 ggatttatgcagggtgcataaggatttccttatgcaccataacc 39861823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 235
Target Start/End: Original strand, 13363792 - 13363842
Alignment:
Q  185 tgggatttatgcatggtgcatgaggatttccttatgcaccataaccactcc 235  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||| ||||    
T  13363792 tgggatttatgcacggtgcataaggatttccttgtgcaccataaccgctcc 13363842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 28070218 - 28070153
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||||||||||||||  | | ||||||||||||| ||||||||| ||||||| |||||||    
T  28070218 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaactatcagat 28070153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 34329127 - 34329192
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||||||||||||||  | | | ||||||||||| ||||||||| |||||||||||||||    
T  34329127 ggcaaaagttatggtgcataaggaaat-ctttatgcaccgtgcataaacacttcacaaccatcagat 34329192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 3340632 - 3340591
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  3340632 atttatgcagggtgcataaggatttccttatgcaccataacc 3340591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 66 - 126
Target Start/End: Original strand, 4674965 - 4675025
Alignment:
Q  66 aagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcaga 126  Q
    |||||||  ||| |||| |||||||||||||||| | ||||||||| ||||||||||||||    
T  4674965 aagttattatgcgtaagtcatttccttatgcaccctgcataaacacttcacaaccatcaga 4675025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 127
Target Start/End: Complemental strand, 18465620 - 18465556
Alignment:
Q  63 caaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||  |||||||| |||||| ||||||| | | ||||||||| |||||||||||||||    
T  18465620 caaaagttattatgcataagacatttcattatgcatcctgcataaacacttcacaaccatcagat 18465556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 13362816 - 13362777
Alignment:
Q  190 tttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  13362816 tttatgcacggtgcataaggatttccttatgcaccataac 13362777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 20134243 - 20134200
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||    
T  20134243 ggatttatgcaggctgcataaggatttccttatgcaccataacc 20134200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 20134399 - 20134442
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    |||||||||||  |||||| ||||||||||||||||||||||||    
T  20134399 ggatttatgcagagtgcataaggatttccttatgcaccataacc 20134442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 20696327 - 20696370
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| |||| || ||||||||||||||||||||||||    
T  20696327 ggatttatgcagggtgaataaggatttccttatgcaccataacc 20696370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 22671997 - 22672040
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||    
T  22671997 ggatttatgcaggatgcataaggatttccttatgcaccataacc 22672040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 23334756 - 23334706
Alignment:
Q  185 tgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||||||| ||||||| || |||||||||||||||||||||| ||||    
T  23334756 tgggatttatgcacggtgcataag-atttccttatgcaccataaccattccc 23334706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 25017236 - 25017275
Alignment:
Q  190 tttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  25017236 tttatgcacggtgcataaggatttccttatgcaccataac 25017275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 28070172 - 28070211
Alignment:
Q  190 tttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  28070172 tttatgcacggtgcataaggatttccttatgcaccataac 28070211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 35662111 - 35662068
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| | ||||||| ||||||||||||||||||||||||    
T  35662111 ggatttatgtagggtgcataaggatttccttatgcaccataacc 35662068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 35662233 - 35662276
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| || |||||||||||||||||||||    
T  35662233 ggatttatgcagggtgcataagtatttccttatgcaccataacc 35662276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 39861623 - 39861580
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||||| ||||||||    
T  39861623 ggatttatgcagggtgcataaggatttccttatgccccataacc 39861580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 22830788 - 22830830
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    |||||||||||  |||||| |||||||||||||||||||||||    
T  22830788 ggatttatgcagtgtgcataaggatttccttatgcaccataac 22830830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 23155843 - 23155885
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    ||||||||||| ||||||| |||||||| ||||||||||||||    
T  23155843 ggatttatgcaaggtgcataaggatttcattatgcaccataac 23155885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 23335772 - 23335707
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||||||||||||||  | | || |||||||||| ||||||||  |||||||||||||||    
T  23335772 ggcaaaagttatggtgcataaggaaat-ccgtatgcaccgtgcataaacatttcacaaccatcagat 23335707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 23948588 - 23948630
Alignment:
Q  194 tgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    |||| ||||||| ||||||| ||||||||||||||||||||||    
T  23948588 tgcacggtgcataaggattttcttatgcaccataaccactccc 23948630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 5630271 - 5630312
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataa 228  Q
    ||||||||||| ||||||| |||||||||| |||||||||||    
T  5630271 ggatttatgcagggtgcataaggatttcctcatgcaccataa 5630312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 11660835 - 11660794
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||| | ||||||| ||||||||||||||||||||||||    
T  11660835 atttatgtagggtgcataaggatttccttatgcaccataacc 11660794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 16552289 - 16552248
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| |||||||  |||||||||||||||||||||||    
T  16552289 atttatgcagggtgcatacggatttccttatgcaccataacc 16552248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 16667704 - 16667667
Alignment:
Q  185 tgggatttatgcatggtgcatgaggatttccttatgca 222  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  16667704 tgggatttatgcacggtgcataaggatttccttatgca 16667667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 25189862 - 25189817
Alignment:
Q  191 ttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||| ||||||| ||||  ||||||||||||||||||||||||    
T  25189862 ttatgcacggtgcataaggaaatccttatgcaccataaccactccc 25189817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 197 - 230
Target Start/End: Original strand, 25545582 - 25545615
Alignment:
Q  197 atggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| ||||||||||||||||||||||||    
T  25545582 atggtgcataaggatttccttatgcaccataacc 25545615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 39086559 - 39086518
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||    
T  39086559 atttatgcagggtgcataaggattttcttatgcaccataacc 39086518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 229
Target Start/End: Original strand, 39086707 - 39086748
Alignment:
Q  188 gatttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    ||||||| ||| |||||| |||||||||||||||||||||||    
T  39086707 gatttatacatagtgcataaggatttccttatgcaccataac 39086748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 39166195 - 39166150
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataaccac 232  Q
    ||||||||||| ||||||| || ||||||||||||||| |||||||    
T  39166195 ggatttatgcagggtgcataagaatttccttatgcaccgtaaccac 39166150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 39166342 - 39166383
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||    
T  39166342 atttatgcagggtgcataaggattttcttatgcaccataacc 39166383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 703772 - 703732
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    ||||||||| | ||||| |||||||||||||||||||||||    
T  703772 atttatgcaggatgcataaggatttccttatgcaccataac 703732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 15059633 - 15059677
Alignment:
Q  187 ggatttatgcatggtgcatgagg-atttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||| |||||||||||||||||||||    
T  15059633 ggatttatgcagggtgcataagggatttccttatgcaccataacc 15059677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 135; Significance: 3e-70; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 61 - 236
Target Start/End: Original strand, 8149831 - 8150010
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  8149831 ggcaaaagttatggtgcataagccatttccttatgcatcgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 8149930  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||| ||||||    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  8149931 actttgggggtgtaggaagcaattatgttgggatttatgcatggtgcataaggatttccttatgcaccattaccactccc 8150010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 61 - 236
Target Start/End: Original strand, 8154455 - 8154634
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  8154455 ggcaaaagttatggtgcataagccatttccttatgcatcgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 8154554  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||| ||||||    ||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  8154555 actttgggggtgtaggaagcaattatgttgggatttatgcatggtgcataaggatttccttatgcaccattaccactccc 8154634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 61 - 246
Target Start/End: Original strand, 39355035 - 39355224
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||  ||||| |||    
T  39355035 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatagttttggctc 39355134  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactcccccttatttca 246  Q
     |||||||| ||||||    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||    
T  39355135 gctttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactcccacttatttca 39355224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 61 - 237
Target Start/End: Complemental strand, 7487320 - 7487140
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||| |||    
T  7487320 ggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttttggctc 7487221  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactcccc 237  Q
    ||||||| | ||||||    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  7487220 actttggaggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactcccc 7487140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 61 - 236
Target Start/End: Complemental strand, 15016632 - 15016453
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||    
T  15016632 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 15016533  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||| ||||||    |||||||||| |||||||||| ||||||| || |||||||||||||||||||||||||||    
T  15016532 actttgggggtgtaggaagcaattatgttgagatttatgcacggtgcataagaatttccttatgcaccataaccactccc 15016453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 61 - 236
Target Start/End: Complemental strand, 1292245 - 1292066
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||  |||    
T  1292245 ggcaaaagttatggtgcataagttattttcttatgcaccgtacataaacacatcacaaccatcagatttcttttattttgaacaaaaatggtttttgctc 1292146  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    | ||||||| ||||||    ||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  1292145 attttgggggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttccttatgcaccataaccactccc 1292066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 63 - 234
Target Start/End: Original strand, 34464713 - 34464888
Alignment:
Q  63 caaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactcac 162  Q
    ||||||||||||||||||||  ||||||||||||||||| |||||||| |||||||||||||||||||||| |||||||||||||||| ||||| |||||    
T  34464713 caaaagttatggtgcataagttatttccttatgcaccgtgcataaacatatcacaaccatcagatttcttttattttgaacaaaaatggttttggctcac 34464812  T
Q  163 tttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactc 234  Q
    ||| ||| ||||||    ||||||||| ||||||||||| ||||||| |||||||||||||| |||||||||||||    
T  34464813 tttaggggtgtaggaagcaattatgtttggatttatgcacggtgcataaggatttccttatggaccataaccactc 34464888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 61 - 197
Target Start/End: Original strand, 9143585 - 9143725
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||| |||||||||||||| |||||||||||||||| |||||||||    
T  9143585 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaatcatcagatttcttttattttgaacaaaaatggttttgactc 9143684  T
Q  161 actttggggatgtagg----aattatgttgggatttatgca 197  Q
    ||||||||| ||||||    ||||||||||| |||||||||    
T  9143685 actttgggggtgtaggaagcaattatgttggaatttatgca 9143725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 61 - 140
Target Start/End: Original strand, 2263573 - 2263652
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttg 140  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||  |||| ||| ||||||    
T  2263573 ggcaaaagttatggtgcataagccatttctttatgcaccgtgcataaacacttcacaaccatcgcatttatttcattttg 2263652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 59 - 122
Target Start/End: Original strand, 18762865 - 18762928
Alignment:
Q  59 agggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccat 122  Q
    ||||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||    
T  18762865 agggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccat 18762928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 41346103 - 41346045
Alignment:
Q  64 aaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccat 122  Q
    ||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||    
T  41346103 aaaagttatggtgcataagccattttcttatgcaccgtatataaacacttcacaaccat 41346045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 18297222 - 18297163
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| |||||    
T  18297222 aattatgttgggatttatgcacggtgcataaggatttccctatgcaccataaccgctccc 18297163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 52 - 129
Target Start/End: Original strand, 25995277 - 25995354
Alignment:
Q  52 gatttatagggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    |||||| ||||||||||||||  |||||||| |||||||||||||||  | |||||| || |||||||||||||||||    
T  25995277 gatttagagggcaaaagttattatgcataagacatttccttatgcactctgcataaatacttcacaaccatcagattt 25995354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 36637003 - 36636935
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    ||||||||||||  |||||||| ||||| |||||| ||| ||||||||||| |||||||||||||||||    
T  36637003 ggcaaaagttattatgcataagtcattttcttatgtaccctacataaacacttcacaaccatcagattt 36636935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 189 - 237
Target Start/End: Complemental strand, 41345129 - 41345081
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataaccactcccc 237  Q
    ||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  41345129 atttatgcacggtgcataaggatttccttatgcaccataaccactcccc 41345081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 63 - 129
Target Start/End: Original strand, 5098718 - 5098784
Alignment:
Q  63 caaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    ||||||||||  |||||||| |||||||||||||||| | ||||||||| |||||||||||| ||||    
T  5098718 caaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatcaaattt 5098784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 18298176 - 18298111
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||||||||||||||  | | ||||||||||||| ||||||||| |||||||||||||||    
T  18298176 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagat 18298111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 25193981 - 25194034
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    |||||| |||||||||||||| ||||||| |||||||| |||||||||||||||    
T  25193981 aattatattgggatttatgcacggtgcataaggatttcattatgcaccataacc 25194034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 13081922 - 13081858
Alignment:
Q  65 aaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    ||||||||  |||||||| |||||| ||||||||| ||||||||||| ||||||||||| |||||    
T  13081922 aaagttattatgcataagtcatttcattatgcaccctacataaacacttcacaaccatctgattt 13081858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 21155441 - 21155480
Alignment:
Q  68 gttatggtgcataagccatttccttatgcaccgtacataa 107  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  21155441 gttatggtgcataagccatttccttatgcaccgtgcataa 21155480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 107
Target Start/End: Complemental strand, 27974330 - 27974291
Alignment:
Q  68 gttatggtgcataagccatttccttatgcaccgtacataa 107  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  27974330 gttatggtgcataagccatttccttatgcaccgtgcataa 27974291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 107
Target Start/End: Complemental strand, 28060859 - 28060820
Alignment:
Q  68 gttatggtgcataagccatttccttatgcaccgtacataa 107  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  28060859 gttatggtgcataagccatttccttatgcaccgtgcataa 28060820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 31783837 - 31783794
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  31783837 ggatttatgcagggtgcataaggatttccttatgcaccataacc 31783794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 34726648 - 34726605
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  34726648 ggatttatgcagggtgcataaggatttccttatgcaccataacc 34726605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 230
Target Start/End: Complemental strand, 20661439 - 20661397
Alignment:
Q  188 gatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    |||||||||| ||||||| ||||||||||||||||||||||||    
T  20661439 gatttatgcagggtgcataaggatttccttatgcaccataacc 20661397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 20709774 - 20709839
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||||||||||||||  | | |||||| |||||| ||||||||| |||||||||||||||    
T  20709774 ggcaaaagttatggtgcataaggaaat-ccttatccaccgtgcataaacacttcacaaccatcagat 20709839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 25192892 - 25192957
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||||||||||||||  | | ||||||||||||| ||||||||| |||||||||| ||||    
T  25192892 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccattagat 25192957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 24183599 - 24183640
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  24183599 atttatgcagggtgcataaggatttccttatgcaccataacc 24183640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 19246704 - 19246664
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    ||||||||| ||||||| |||||||||||||||||||||||    
T  19246704 atttatgcagggtgcataaggatttccttatgcaccataac 19246664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 39548058 - 39548110
Alignment:
Q  77 cataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    |||||| |||||||||||||||| | ||||||||| |||||||||||| ||||    
T  39548058 cataagtcatttccttatgcaccctgcataaacacttcacaaccatcaaattt 39548110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 60 - 127
Target Start/End: Complemental strand, 4281855 - 4281788
Alignment:
Q  60 gggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    |||||||||||||  |||||||| |||||||||||| ||  |  |||||||| |||||||||||||||    
T  4281855 gggcaaaagttattatgcataagacatttccttatgtactctgtataaacacttcacaaccatcagat 4281788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 16111705 - 16111748
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| | ||||||||||||||||||||||    
T  16111705 ggatttatgcagggtgcataaagatttccttatgcaccataacc 16111748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 18298130 - 18298169
Alignment:
Q  190 tttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  18298130 tttatgcacggtgcataaggatttccttatgcaccataac 18298169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 20661595 - 20661638
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| | ||||||||||||||||||||||    
T  20661595 ggatttatgcagggtgcataatgatttccttatgcaccataacc 20661638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 22596348 - 22596305
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||| ||||||||||    
T  22596348 ggatttatgcagggtgcataaggatttccttatacaccataacc 22596305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 22596504 - 22596547
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||| ||| ||||||||||||||||||||||||    
T  22596504 ggatttatgcagggtacataaggatttccttatgcaccataacc 22596547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 25192938 - 25192899
Alignment:
Q  190 tttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  25192938 tttatgcacggtgcataaggatttccttatgcaccataac 25192899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 31711554 - 31711511
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||| ||| ||||||||||||||||||||||||    
T  31711554 ggatttatgcagggtacataaggatttccttatgcaccataacc 31711511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 34726796 - 34726839
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| || |||||||||||||||||||||    
T  34726796 ggatttatgcagggtgcataagaatttccttatgcaccataacc 34726839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 66 - 121
Target Start/End: Complemental strand, 40853740 - 40853685
Alignment:
Q  66 aagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaacca 121  Q
    |||||||  ||||||||||||||||||||||| | | ||||||||| |||||||||    
T  40853740 aagttattatgcataagccatttccttatgcatcctgcataaacacttcacaacca 40853685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 42364693 - 42364736
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||| ||||||||||||    
T  42364693 ggatttatgcagggtgcataaggatttccttttgcaccataacc 42364736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 44915491 - 44915534
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| || |||||||||||||||||||||    
T  44915491 ggatttatgcagggtgcataagcatttccttatgcaccataacc 44915534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 16142127 - 16142073
Alignment:
Q  75 tgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    |||| |||||||||||||||||||  | ||||||||| |||||||||| ||||||    
T  16142127 tgcacaagccatttccttatgcacgctgcataaacacttcacaaccattagattt 16142073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 12449096 - 12449055
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    |||||||||  |||||| ||||||||||||||||||||||||    
T  12449096 atttatgcagtgtgcataaggatttccttatgcaccataacc 12449055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 12449245 - 12449286
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| ||||||| | ||||||||||||||||||||||    
T  12449245 atttatgcaaggtgcataaagatttccttatgcaccataacc 12449286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 14551382 - 14551319
Alignment:
Q  62 gcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    |||||||||||||||||||||  | ||| |||||||| || ||||||||| |||||||||||||||    
T  14551382 gcaaaagttatggtgcataaggaaattc-ttatgcac-gtgcataaacacttcacaaccatcagat 14551319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 25575365 - 25575324
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| | ||||| ||||||||||||||||||||||||    
T  25575365 atttatgcaggatgcataaggatttccttatgcaccataacc 25575324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 31711701 - 31711741
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| ||||||||||||||| ||||||||||||||||    
T  31711701 atttatgcagggtgcatgaggattt-cttatgcaccataacc 31711741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 37867196 - 37867155
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| |||| || ||||||||||||||||||||||||    
T  37867196 atttatgcagggtggataaggatttccttatgcaccataacc 37867155  T

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Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 37867357 - 37867398
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| ||||||| |||||||||||||||||| |||||    
T  37867357 atttatgcagggtgcataaggatttccttatgcaccgtaacc 37867398  T

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Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 42364534 - 42364493
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| ||||||| ||||||| ||||||||||||||||    
T  42364534 atttatgcagggtgcataaggattttcttatgcaccataacc 42364493  T

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Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Original strand, 43823873 - 43823910
Alignment:
Q  185 tgggatttatgcatggtgcatgaggatttccttatgca 222  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  43823873 tgggatttatgcacggtgcataaggatttccttatgca 43823910  T

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Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 223
Target Start/End: Complemental strand, 15252883 - 15252847
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcac 223  Q
    ||||||||||| ||||||| |||||||||||||||||    
T  15252883 ggatttatgcagggtgcataaggatttccttatgcac 15252847  T

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Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 198 - 230
Target Start/End: Original strand, 31783996 - 31784028
Alignment:
Q  198 tggtgcatgaggatttccttatgcaccataacc 230  Q
    |||||||| ||||||||||||||||||||||||    
T  31783996 tggtgcataaggatttccttatgcaccataacc 31784028  T

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Target: chr3 (Bit Score: 133; Significance: 4e-69; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 61 - 238
Target Start/End: Original strand, 19284671 - 19284852
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||    
T  19284671 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttttgactc 19284770  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccccc 238  Q
    ||||||||||||||||    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  19284771 actttggggatgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccccc 19284852  T

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Target: chr3; HSP #2
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 61 - 236
Target Start/End: Complemental strand, 3475473 - 3475294
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  3475473 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 3475374  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||| ||||||||    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  3475373 actttggagatgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 3475294  T

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Target: chr3; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 61 - 237
Target Start/End: Complemental strand, 9596046 - 9595866
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||| |||    
T  9596046 ggcaaaagttatggtgcataagctatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttttggctc 9595947  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactcccc 237  Q
    ||||||||| ||||||    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  9595946 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactcccc 9595866  T

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Target: chr3; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 61 - 236
Target Start/End: Complemental strand, 26662604 - 26662425
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||    
T  26662604 ggcaaaagttattgtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 26662505  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||| ||||||    |||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||    
T  26662504 actttgggggtgtaggaagcaattatgttgggatttatgcacagtgcataaggatttccttatgcaccataaccactccc 26662425  T

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Target: chr3; HSP #5
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 61 - 236
Target Start/End: Original strand, 9106267 - 9106446
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||| ||||| |||    
T  9106267 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacattacaaccatcagatttctttcattttgaacaaaaatggttttggctc 9106366  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||| ||||||    |||||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  9106367 actttgggggtgtaggaagcaattatattgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 9106446  T

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Target: chr3; HSP #6
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 61 - 236
Target Start/End: Complemental strand, 30947977 - 30947798
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||| |||||||| |||||||||||||||| ||||| |||    
T  30947977 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaatcatcaaatttctttcattttgaacaaaaatggttttggctc 30947878  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||| ||| ||||||    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  30947877 acttttggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 30947798  T

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Target: chr3; HSP #7
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 60 - 236
Target Start/End: Complemental strand, 46237825 - 46237645
Alignment:
Q  60 gggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgact 159  Q
    |||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| ||||| ||    
T  46237825 gggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttttggct 46237726  T
Q  160 cactttgggg----atgtaggaattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||||    ||| || ||||||||||||||||||||| |||| || ||||||||||||||||||||||||||||||    
T  46237725 cactttgggggagtatgaagcaattatgttgggatttatgcacggtgtataaggatttccttatgcaccataaccactccc 46237645  T

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Target: chr3; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 61 - 236
Target Start/End: Complemental strand, 2941992 - 2941813
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||    
T  2941992 ggcaaaagttatggtgcataagttatttccttatgtaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 2941893  T
Q  161 actttggggatgt----aggaattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||| |||    || ||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||    
T  2941892 actttgggggtgtagaaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataatcactccc 2941813  T

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Target: chr3; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 60 - 236
Target Start/End: Original strand, 10986351 - 10986531
Alignment:
Q  60 gggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgact 159  Q
    |||||||||||||| || |||||  ||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||| |||||||||| ||||||||    
T  10986351 gggcaaaagttatgatgtataagttatttccttatgcaccgtgcataaacacatcataaccatcagatttcttttattttaaacaaaaatggttttgact 10986450  T
Q  160 cactttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||| |||||||||    |||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  10986451 cactttgaggatgtaggaagcaattatgttgagatttatgcacggtgcataaggatttccttatgcaccataaccactccc 10986531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 61 - 236
Target Start/End: Original strand, 47335032 - 47335216
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||||||||| |||    
T  47335032 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatgattttggctc 47335131  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcat-----gaggatttccttatgcaccataaccactccc 236  Q
    ||||||||| ||||||    ||||||||||||||||||||| |||||||      ||||||||||||||||||||||||||||||    
T  47335132 actttgggggtgtaggaaacaattatgttgggatttatgcacggtgcataaggaaaggatttccttatgcaccataaccactccc 47335216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 61 - 236
Target Start/End: Complemental strand, 6097750 - 6097571
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||| ||| ||||||||||||| |||||||||||||||| ||||| |||    
T  6097750 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcataactatcagatttcttttattttgaacaaaaatggttttggctc 6097651  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    |||||  || ||||||    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  6097650 actttaagggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 6097571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 61 - 237
Target Start/End: Original strand, 54379163 - 54379342
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||| |||||||| ||||||||||||||||  |||| |||    
T  54379163 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcatatttcttttattttgaacaaaaatg-gtttggctc 54379261  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactcccc 237  Q
    || |||| | ||||||    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  54379262 acattggaggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactcccc 54379342  T

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Target: chr3; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 62 - 236
Target Start/End: Complemental strand, 33414078 - 33413899
Alignment:
Q  62 gcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactca 161  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||| || ||||||| ||||| ||||    
T  33414078 gcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttaaataaaaatggttttggctca 33413979  T
Q  162 ctttggggatgtagg----aattatgttgggatttatgcatggtgcatga-ggatttccttatgcaccataaccactccc 236  Q
    ||||| || ||||||    |||||| |||||||||||||| ||||||| | |||||||||||||||||||||||||||||    
T  33413978 ctttgagggtgtaggaagcaattatattgggatttatgcacggtgcataagggatttccttatgcaccataaccactccc 33413899  T

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Target: chr3; HSP #14
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 65 - 236
Target Start/End: Original strand, 26960630 - 26960805
Alignment:
Q  65 aaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactcactt 164  Q
    |||||||||||| |||||  ||||||||||||||||| ||||||||||| |||| |||||| ||||||| |||||||||||||||| ||||| |||||||    
T  26960630 aaagttatggtgtataagttatttccttatgcaccgtgcataaacacattacaatcatcaggtttcttttattttgaacaaaaatggttttggctcactt 26960729  T
Q  165 tggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||| ||||||    |||||| |||||||||||||| ||||||| | ||||||||||||||||||||||||||||    
T  26960730 tgggggtgtaggaagcaattatattgggatttatgcacggtgcataaagatttccttatgcaccataaccactccc 26960805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 237 - 329
Target Start/End: Original strand, 11343090 - 11343182
Alignment:
Q  237 ccttatttcatgctacactacccagcaataaacttgatccacacctctaatttcatgaaatctctagcaattagattgaattgatgaccctct 329  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  11343090 ccttatttcatgctacactacccagcaataaacttgatccacacctctaatttcatgaaatctctagctattagattgaattgatgaccctct 11343182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 41192413 - 41192355
Alignment:
Q  64 aaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccat 122  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  41192413 aaaagttatggtgcataagtcatttccttatgcaccgtacataaacacttcacaaccat 41192355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 51846843 - 51846785
Alignment:
Q  64 aaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccat 122  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  51846843 aaaagttatggtgcataagccatttccttatgcaccgtgcataaacacttcacaaccat 51846785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 19384435 - 19384375
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactcccc 237  Q
    ||||||||||||||||||||| ||||||| || ||||||||||||||||||||| ||||||    
T  19384435 aattatgttgggatttatgcacggtgcataagaatttccttatgcaccataaccgctcccc 19384375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 50755182 - 50755234
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  50755182 aattatgttgggatttatgcacggtgcataaggatttccttatgcaccataac 50755234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 188 - 238
Target Start/End: Complemental strand, 34562442 - 34562392
Alignment:
Q  188 gatttatgcatggtgcatgaggatttccttatgcaccataaccactccccc 238  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  34562442 gatttatgcacggtgcataaggatttccttatgcaccataaccactccccc 34562392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 34563410 - 34563352
Alignment:
Q  64 aaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccat 122  Q
    ||||||||||||||||||||||||| |||||||||||| ||||||||  ||||||||||    
T  34563410 aaaagttatggtgcataagccattttcttatgcaccgtgcataaacatttcacaaccat 34563352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 59 - 129
Target Start/End: Complemental strand, 51362505 - 51362436
Alignment:
Q  59 agggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    ||||||||||||||||||||||||  | | ||||||||||||| ||||||||| |||||||||||||||||    
T  51362505 agggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagattt 51362436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 8719133 - 8719186
Alignment:
Q  183 gttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||| |||||    
T  8719133 gttgggatttatgcacggtgcataaggatttccttatgcaccataaccgctccc 8719186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 236
Target Start/End: Original strand, 9071020 - 9071073
Alignment:
Q  183 gttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||| |||||    
T  9071020 gttgggatttatgcacggtgcataaggatttccttatgcaccataaccgctccc 9071073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 51682068 - 51681999
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttc 130  Q
    ||||||||||||  |||||||| |||||||||||||||| | ||||||||| || |||||||||||||||    
T  51682068 ggcaaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcgcaaccatcagatttc 51681999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 19385380 - 19385313
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    ||||||||||||||||||||||  | | ||||||||||||| ||||||||| |||||||||||||||||    
T  19385380 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagattt 19385313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 47728388 - 47728456
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    ||||||||||||  |||||||| ||||| |||||||||| | ||||||||| |||||||||||||||||    
T  47728388 ggcaaaagttattatgcataagtcattttcttatgcaccctgcataaacacttcacaaccatcagattt 47728456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 53594972 - 53595036
Alignment:
Q  65 aaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    ||||||||  |||||||||||||| |||||||||| | ||||||||| |||||||||||||||||    
T  53594972 aaagttattatgcataagccattttcttatgcaccctgcataaacacttcacaaccatcagattt 53595036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 8718100 - 8718166
Alignment:
Q  60 gggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    |||||||||||||||||||||||  | | |||||||||||||||||||| || |||||||||||||||    
T  8718100 gggcaaaagttatggtgcataaggaaat-ccttatgcaccgtacataaatacttcacaaccatcagat 8718166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 9069987 - 9070053
Alignment:
Q  60 gggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    |||||||||||||||||||||||  | | |||||||||||||||||||| || |||||||||||||||    
T  9069987 gggcaaaagttatggtgcataaggaaat-ccttatgcaccgtacataaatacttcacaaccatcagat 9070053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 51361577 - 51361518
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||| |||||||| || ||||||| |||||||||||||||||||||||| |||||    
T  51361577 aattatgttaggatttatacacggtgcataaggatttccttatgcaccataaccgctccc 51361518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 60 - 120
Target Start/End: Original strand, 23755284 - 23755344
Alignment:
Q  60 gggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaacc 120  Q
    |||||||||||||  |||||||| |||||||||||||||| | ||||||||| ||||||||    
T  23755284 gggcaaaagttattatgcataagacatttccttatgcaccctgcataaacacttcacaacc 23755344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 8036844 - 8036801
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  8036844 ggatttatgcagggtgcataaggatttccttatgcaccataacc 8036801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 36185905 - 36185948
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  36185905 ggatttatgcagggtgcataaggatttccttatgcaccataacc 36185948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 50416524 - 50416481
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  50416524 ggatttatgcagggtgcataaggatttccttatgcaccataacc 50416481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 50416564 - 50416607
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  50416564 ggatttatgcagggtgcataaggatttccttatgcaccataacc 50416607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 7045365 - 7045300
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||||||||||||||  | ||| |||||||||||  |||||||| |||||||||||||||    
T  7045365 ggcaaaagttatggtgcataaggaaattc-ttatgcaccgtgtataaacacttcacaaccatcagat 7045300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 236
Target Start/End: Complemental strand, 16276713 - 16276664
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||||| ||||||| |||||||| ||||||||||||||| |||||    
T  16276713 ggatttatgcacggtgcataaggatttctttatgcaccataaccgctccc 16276664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 229
Target Start/End: Original strand, 47924367 - 47924408
Alignment:
Q  188 gatttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    |||||||||| ||||||| |||||||||||||||||||||||    
T  47924367 gatttatgcagggtgcataaggatttccttatgcaccataac 47924408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 8036989 - 8037041
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataaccactccccct 239  Q
    ||||||||||| ||||||| |||||||||| ||||||||||||| | ||||||    
T  8036989 ggatttatgcagggtgcataaggatttcctcatgcaccataaccgcaccccct 8037041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 23699326 - 23699390
Alignment:
Q  60 gggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatca 124  Q
    |||||||||||||  |||||||| ||||| ||||| |||| | ||||||||| ||||||||||||    
T  23699326 gggcaaaagttattatgcataagacattttcttatacaccctgcataaacacttcacaaccatca 23699390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 23717781 - 23717845
Alignment:
Q  60 gggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatca 124  Q
    |||||||||||||  |||||||| ||||| ||||| |||| | ||||||||| ||||||||||||    
T  23717781 gggcaaaagttattatgcataagacattttcttatacaccctgcataaacacttcacaaccatca 23717845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 124
Target Start/End: Original strand, 23736237 - 23736301
Alignment:
Q  60 gggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatca 124  Q
    |||||||||||||  |||||||| ||||| ||||| |||| | ||||||||| ||||||||||||    
T  23736237 gggcaaaagttattatgcataagacattttcttatacaccctgcataaacacttcacaaccatca 23736301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 241
Target Start/End: Complemental strand, 27068566 - 27068522
Alignment:
Q  197 atggtgcatgaggatttccttatgcaccataaccactccccctta 241  Q
    ||||||||| |||||||||||||||||||||||| | ||||||||    
T  27068566 atggtgcataaggatttccttatgcaccataaccgcaccccctta 27068522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 229
Target Start/End: Original strand, 27446215 - 27446255
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    ||||||||| ||||||| |||||||||||||||||||||||    
T  27446215 atttatgcaaggtgcataaggatttccttatgcaccataac 27446255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 41191452 - 41191404
Alignment:
Q  188 gatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    |||||||||| ||||||| || |||||| ||||||||||||||||||||    
T  41191452 gatttatgcacggtgcataagaatttccctatgcaccataaccactccc 41191404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 50754008 - 50754071
Alignment:
Q  63 caaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||||| ||||||  | | ||||||||||||| ||||||||| |||||||||||||||    
T  50754008 caaaagttatggtacataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagat 50754071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 12974056 - 12974013
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||| ||| ||||||| ||||||||||||||||||||||||    
T  12974056 ggatttaggcagggtgcataaggatttccttatgcaccataacc 12974013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 12974191 - 12974233
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  12974191 ggatttatgca-ggtgcataaggatttccttatgcaccataacc 12974233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 19012562 - 19012605
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| || |||||||||||||||||||||    
T  19012562 ggatttatgcagggtgcataagaatttccttatgcaccataacc 19012605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 19385334 - 19385373
Alignment:
Q  190 tttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  19385334 tttatgcacggtgcataaggatttccttatgcaccataac 19385373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 63 - 118
Target Start/End: Original strand, 32232993 - 32233048
Alignment:
Q  63 caaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaa 118  Q
    ||||||||||  |||||||| |||||||||||||||| | ||||||||| ||||||    
T  32232993 caaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaa 32233048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 36185770 - 36185727
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||    
T  36185770 ggatttatgcaggatgcataaggatttccttatgcaccataacc 36185727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 51362457 - 51362496
Alignment:
Q  190 tttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  51362457 tttatgcacggtgcataaggatttccttatgcaccataac 51362496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 127
Target Start/End: Complemental strand, 52987689 - 52987650
Alignment:
Q  88 tccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    |||||||||||||| ||||||||| |||||||||||||||    
T  52987689 tccttatgcaccgtgcataaacacttcacaaccatcagat 52987650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 123
Target Start/End: Complemental strand, 1377842 - 1377781
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatc 123  Q
    ||||||||||||||||||||||  ||||| ||||||||| |||||||  | ||||||||||||    
T  1377842 ggcaaaagttatggtgcataag-gatttctttatgcaccatacataaggaaatcacaaccatc 1377781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 199 - 233
Target Start/End: Complemental strand, 17620768 - 17620734
Alignment:
Q  199 ggtgcatgaggatttccttatgcaccataaccact 233  Q
    ||||||| |||||||||||||||||||||||||||    
T  17620768 ggtgcataaggatttccttatgcaccataaccact 17620734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 28300018 - 28299952
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||| ||||  |||||||| |||||||||||| ||| | ||||||||| ||||||| |||||||    
T  28300018 ggcaaaaattattatgcataagtcatttccttatgtaccatgcataaacacttcacaactatcagat 28299952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 47225848 - 47225890
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    ||||||||||| ||| ||| |||||||||||||||||||||||    
T  47225848 ggatttatgcagggtacataaggatttccttatgcaccataac 47225890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 187 - 228
Target Start/End: Original strand, 21175268 - 21175309
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataa 228  Q
    ||||||||||| ||||||| |||||||||| |||||||||||    
T  21175268 ggatttatgcagggtgcataaggatttcctcatgcaccataa 21175309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 8718148 - 8718108
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    ||||||| | ||||||| |||||||||||||||||||||||    
T  8718148 atttatgtacggtgcataaggatttccttatgcaccataac 8718108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 189 - 229
Target Start/End: Complemental strand, 9070035 - 9069995
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    ||||||| | ||||||| |||||||||||||||||||||||    
T  9070035 atttatgtacggtgcataaggatttccttatgcaccataac 9069995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 128; Significance: 4e-66; HSPs: 89)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 61 - 233
Target Start/End: Complemental strand, 13635791 - 13635615
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||    
T  13635791 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaataaaaatggttttgactc 13635692  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccact 233  Q
    ||||||||| ||||||    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  13635691 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccact 13635615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 61 - 237
Target Start/End: Complemental strand, 27865803 - 27865623
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    |||||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||| |||    
T  27865803 ggcaaaagttatagtgcataagccatttccatatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaataattttggctc 27865704  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactcccc 237  Q
    ||||||||| ||||||    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  27865703 actttgggggtgtaggaagcaattatgttgggatttatgcatggtgcataaggatttccttatacaccataaccactcccc 27865623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 61 - 236
Target Start/End: Original strand, 11785974 - 11786153
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||    
T  11785974 ggcaaaagttatggtgcataaaccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttttggctc 11786073  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||| ||| ||||||    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  11786074 acttttggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 11786153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 61 - 236
Target Start/End: Original strand, 11798141 - 11798320
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||    
T  11798141 ggcaaaagttatggtgcataaaccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttttggctc 11798240  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||| ||| ||||||    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  11798241 actttaggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 11798320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 61 - 236
Target Start/End: Complemental strand, 15051202 - 15051023
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  15051202 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 15051103  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||| ||||||    ||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  15051102 actttgggggtgtaggaagcaattatgttaggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 15051023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 61 - 232
Target Start/End: Original strand, 30597699 - 30597874
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||    
T  30597699 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatgattttggctc 30597798  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccac 232  Q
    ||| ||||| ||||||    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||    
T  30597799 actctgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccac 30597874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 61 - 236
Target Start/End: Complemental strand, 49426123 - 49425944
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||| ||||| |||    
T  49426123 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcaaatttcttttattttgaacaaaaatggttttggctc 49426024  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||| ||||||    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  49426023 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 49425944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 59 - 236
Target Start/End: Complemental strand, 49492580 - 49492399
Alignment:
Q  59 agggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgac 158  Q
    |||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||    
T  49492580 agggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaataaaaatggttttgac 49492481  T
Q  159 tcactttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||| ||  ||||||    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||    
T  49492480 tcactttaggagtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataactactccc 49492399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 58 - 236
Target Start/End: Original strand, 53441317 - 53441499
Alignment:
Q  58 tagggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttga 157  Q
    |||||||||||||||||||||||||  ||||||||||||| ||| |||||||||||||||||||||| |||||||| |||||||||||||||| |||||     
T  53441317 tagggcaaaagttatggtgcataagttatttccttatgcatcgtgcataaacacatcacaaccatcaaatttcttttattttgaacaaaaatggttttgg 53441416  T
Q  158 ctcactttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    |||||||||||| ||||||    ||||||||||| ||||||||  ||||||| ||||||||||||||||||||||||||||||    
T  53441417 ctcactttgggggtgtaggaagcaattatgttggaatttatgcccggtgcataaggatttccttatgcaccataaccactccc 53441499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 61 - 222
Target Start/End: Complemental strand, 51921331 - 51921166
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||    
T  51921331 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 51921232  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgca 222  Q
    ||||||||| ||||||    ||||||||||||||||||||| ||||||| ||||||||||||||||    
T  51921231 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgca 51921166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 61 - 236
Target Start/End: Original strand, 46672439 - 46672617
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||  ||||| |||    
T  46672439 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttattttattttgaacaaaaatagttttggctc 46672538  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||| ||||||    ||| ||||||||||||||||| | ||||| || ||||||||||||| |||||||||||||    
T  46672539 actttgggg-tgtaggaagcaatcatgttgggatttatgcacgatgcataagaatttccttatgcaacataaccactccc 46672617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 61 - 197
Target Start/End: Original strand, 1621875 - 1622016
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||     
T  1621875 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttaattttgaacaaaaatggttttgacta 1621974  T
Q  161 acttt-ggggatgtagg----aattatgttgggatttatgca 197  Q
    ||||| |||| ||||||    |||||||||||||||||||||    
T  1621975 actttggggggtgtaggaagcaattatgttgggatttatgca 1622016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 61 - 220
Target Start/End: Complemental strand, 35291614 - 35291451
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||| |||||| ||| |||||||||||||||  ||||| |||    
T  35291614 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccataagatttattttattttgaacaaaaatagttttggctc 35291515  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatg 220  Q
    | ||||||| ||||||    ||||||||||||||||||||| ||||||| ||||||||||||||    
T  35291514 aatttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatg 35291451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 61 - 211
Target Start/End: Original strand, 55765481 - 55765635
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||    
T  55765481 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacattacaaccatcagatttctttcattttgaacaaaaatgattttgactc 55765580  T
Q  161 actttgggg----atgtaggaattatgttgggatttatgcatggtgcatgaggat 211  Q
    |||||  ||    ||| || |||||| |||||||||||||| ||||||| |||||    
T  55765581 actttaagggtatatgaagcaattatattgggatttatgcacggtgcataaggat 55765635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 60 - 205
Target Start/End: Original strand, 36011842 - 36011991
Alignment:
Q  60 gggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgact 159  Q
    |||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||  ||||| ||    
T  36011842 gggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatagttttggct 36011941  T
Q  160 cactttggggatgtagg----aattatgttgggatttatgcatggtgcat 205  Q
    |||||| ||| ||||||    |||||||||| ||||||| || |||||||    
T  36011942 cactttaggggtgtaggaagcaattatgttgagatttatacacggtgcat 36011991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 140
Target Start/End: Original strand, 38244946 - 38245023
Alignment:
Q  63 caaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttg 140  Q
    |||||||||||||||||||||||||||||| ||||| || ||||||||| ||||||||||||||||||||| ||||||    
T  38244946 caaaagttatggtgcataagccatttccttctgcacagttcataaacacttcacaaccatcagatttcttttattttg 38245023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 61 - 133
Target Start/End: Original strand, 10472497 - 10472569
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttcttt 133  Q
    |||||||||||||||||||||| |||||||||||||||||| ||||||||  |||||||||||||||||||||    
T  10472497 ggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacatttcacaaccatcagatttcttt 10472569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 61 - 140
Target Start/End: Complemental strand, 26578255 - 26578176
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttg 140  Q
    ||||||||| ||||||||||||||||||| ||||||| ||| ||||||||| ||||||||||||||||||||| ||||||    
T  26578255 ggcaaaagtcatggtgcataagccatttctttatgcatcgtgcataaacacttcacaaccatcagatttctttcattttg 26578176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 177 - 234
Target Start/End: Original strand, 50644660 - 50644717
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactc 234  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  50644660 aattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactc 50644717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 45256885 - 45256944
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||    
T  45256885 aattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccgctccc 45256944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 25574194 - 25574126
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    ||||||||||||  |||||||| |||||||||||||||| | ||||||||| |||||||||||||||||    
T  25574194 ggcaaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatcagattt 25574126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 638984 - 639035
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataa 228  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  638984 aattatgttgggatttatgcacggtgcataaggatttccttatgcaccataa 639035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 1729678 - 1729615
Alignment:
Q  64 aaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||||||||||| |||||| |||| |||||| ||||||||| |||||||||||||||    
T  1729678 aaaagttatggtgcataagtcatttctttatacaccgtgcataaacacttcacaaccatcagat 1729615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 30358835 - 30358886
Alignment:
Q  185 tgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  30358835 tgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 30358886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 20861583 - 20861637
Alignment:
Q  64 aaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaa 118  Q
    ||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||    
T  20861583 aaaagttatggtgcataagccatttccttatgcgccgtgcataaacacttcacaa 20861637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 30357810 - 30357868
Alignment:
Q  64 aaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccat 122  Q
    |||||||||||| |||||| |||||||||||||||||| ||||||||| ||||||||||    
T  30357810 aaaagttatggttcataagtcatttccttatgcaccgtgcataaacacttcacaaccat 30357868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 65 - 122
Target Start/End: Original strand, 38010145 - 38010202
Alignment:
Q  65 aaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccat 122  Q
    |||||||||||||||||| |||||||||||||||| | ||||||||| ||||||||||    
T  38010145 aaagttatggtgcataagtcatttccttatgcaccatgcataaacacttcacaaccat 38010202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 10473638 - 10473697
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||| ||||| ||||||||| ||||||| |||||||||||||||||||||||| |||||    
T  10473638 aattaggttggaatttatgcacggtgcataaggatttccttatgcaccataaccgctccc 10473697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 185 - 236
Target Start/End: Complemental strand, 22180252 - 22180201
Alignment:
Q  185 tgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||||||| ||||||| |||||||||||||||||||||||| |||||    
T  22180252 tgggatttatgcacggtgcataaggatttccttatgcaccataaccgctccc 22180201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 177 - 235
Target Start/End: Complemental strand, 26577315 - 26577257
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactcc 235  Q
    ||||||||||  ||||||||| ||||||| |||||||||||||||||||||||| ||||    
T  26577315 aattatgttgaaatttatgcacggtgcataaggatttccttatgcaccataaccgctcc 26577257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 232
Target Start/End: Complemental strand, 25715687 - 25715642
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataaccac 232  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  25715687 ggatttatgcagggtgcataaggatttccttatgcaccataaccac 25715642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 187 - 232
Target Start/End: Original strand, 54895583 - 54895628
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataaccac 232  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||    
T  54895583 ggatttatgcagggtgcataaggatttccttatgcaccataaccac 54895628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 16298925 - 16298989
Alignment:
Q  65 aaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    ||||||||  |||||||| |||||||||||||||| | ||||| ||| |||||||||||||||||    
T  16298925 aaagttattatgcataagtcatttccttatgcaccctgcataatcacttcacaaccatcagattt 16298989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 188 - 236
Target Start/End: Original strand, 21098133 - 21098181
Alignment:
Q  188 gatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    |||||||||||||||||| ||||||||||||| |||||||||| |||||    
T  21098133 gatttatgcatggtgcataaggatttccttatacaccataaccgctccc 21098181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 24686574 - 24686634
Alignment:
Q  63 caaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatc 123  Q
    ||||||||||  |||||||| |||||||||||||||| | ||||||||| |||||||||||    
T  24686574 caaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatc 24686634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 129
Target Start/End: Original strand, 50643743 - 50643810
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    ||||||||||||||||||||||  | | ||||||||||||| ||||||||| ||| |||||||||||||    
T  50643743 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcataaccatcagattt 50643810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 107
Target Start/End: Original strand, 805109 - 805148
Alignment:
Q  68 gttatggtgcataagccatttccttatgcaccgtacataa 107  Q
    |||||||||||||||||||||||||||||||||| |||||    
T  805109 gttatggtgcataagccatttccttatgcaccgtgcataa 805148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 8165806 - 8165763
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  8165806 ggatttatgcagggtgcataaggatttccttatgcaccataacc 8165763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 17109918 - 17109961
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  17109918 ggatttatgcagggtgcataaggatttccttatgcaccataacc 17109961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 21995714 - 21995671
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  21995714 ggatttatgcagggtgcataaggatttccttatgcaccataacc 21995671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 30779387 - 30779344
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  30779387 ggatttatgcaaggtgcataaggatttccttatgcaccataacc 30779344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 36924285 - 36924242
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  36924285 ggatttatgcagggtgcataaggatttccttatgcaccataacc 36924242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 37059755 - 37059712
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  37059755 ggatttatgcaaggtgcataaggatttccttatgcaccataacc 37059712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 45255974 - 45256040
Alignment:
Q  60 gggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    |||||||||||||||||||||||  | | ||||||||||||| ||||||||| ||||||| |||||||    
T  45255974 gggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaactatcagat 45256040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 53865243 - 53865286
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  53865243 ggatttatgcagggtgcataaggatttccttatgcaccataacc 53865286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 230
Target Start/End: Complemental strand, 1492715 - 1492673
Alignment:
Q  188 gatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    |||||||||| ||||||| ||||||||||||||||||||||||    
T  1492715 gatttatgcagggtgcataaggatttccttatgcaccataacc 1492673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 26447477 - 26447412
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||| ||||||||||||  | | ||||||||||||| ||||||||| |||||||||||||||    
T  26447477 ggcaaaagtaatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagat 26447412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 27764240 - 27764305
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||||||||||||||  | | ||||||||||||| ||||||||| || ||||||||||||    
T  27764240 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcgcaaccatcagat 27764305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 230
Target Start/End: Complemental strand, 33819734 - 33819692
Alignment:
Q  188 gatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    |||||||||| ||||||| ||||||||||||||||||||||||    
T  33819734 gatttatgcagggtgcataaggatttccttatgcaccataacc 33819692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 65 - 127
Target Start/End: Complemental strand, 36621762 - 36621701
Alignment:
Q  65 aaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||||||||||  | | ||||||||||||| ||||||||| |||||||||||||||    
T  36621762 aaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagat 36621701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 2124386 - 2124345
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  2124386 atttatgcagggtgcataaggatttccttatgcaccataacc 2124345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 6841863 - 6841822
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  6841863 atttatgcagggtgcataaggatttccttatgcaccataacc 6841822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 229
Target Start/End: Original strand, 8157290 - 8157331
Alignment:
Q  188 gatttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    |||||||||| ||||||| |||||||||||||||||||||||    
T  8157290 gatttatgcagggtgcataaggatttccttatgcaccataac 8157331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 22181307 - 22181243
Alignment:
Q  64 aaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    |||||||||||||||||||  | | ||||||||||||| |||||| || |||||||||||||||||    
T  22181307 aaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaaaacttcacaaccatcagattt 22181243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 31763110 - 31763151
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  31763110 atttatgcagggtgcataaggatttccttatgcaccataacc 31763151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 36309460 - 36309419
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataa 228  Q
    ||||||||||| ||||||| ||||||||||||||||||||||    
T  36309460 ggatttatgcagggtgcataaggatttccttatgcaccataa 36309419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 51836381 - 51836328
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||||||||||||| | ||||| |  |||||||||||||||||||||    
T  51836381 aattatgttgggatttatgcacgatgcataaaaatttccttatgcaccataacc 51836328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 2124545 - 2124588
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| || |||||||||||||||||||||    
T  2124545 ggatttatgcagggtgcataagaatttccttatgcaccataacc 2124588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 127
Target Start/End: Original strand, 4168384 - 4168423
Alignment:
Q  88 tccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    |||||||||||||| ||||||||| |||||||||||||||    
T  4168384 tccttatgcaccgtgcataaacacttcacaaccatcagat 4168423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 12722938 - 12722981
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| || |||||||||||||||||||||    
T  12722938 ggatttatgcagggtgcataagaatttccttatgcaccataacc 12722981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 17109763 - 17109720
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||| ||| ||||||||||||||||||||||||    
T  17109763 ggatttatgcaaggtacataaggatttccttatgcaccataacc 17109720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 22181264 - 22181303
Alignment:
Q  190 tttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  22181264 tttatgcacggtgcataaggatttccttatgcaccataac 22181303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 25715727 - 25715770
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||| ||||||||||||||||    
T  25715727 ggatttatgcagggtgcataaggattttcttatgcaccataacc 25715770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 27764286 - 27764247
Alignment:
Q  190 tttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  27764286 tttatgcacggtgcataaggatttccttatgcaccataac 27764247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 36621720 - 36621759
Alignment:
Q  190 tttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  36621720 tttatgcacggtgcataaggatttccttatgcaccataac 36621759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 43374491 - 43374448
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||| ||| ||||||||||||||||||||||||    
T  43374491 ggatttatgcagggtacataaggatttccttatgcaccataacc 43374448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 45256021 - 45255982
Alignment:
Q  190 tttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  45256021 tttatgcacggtgcataaggatttccttatgcaccataac 45255982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 50643789 - 50643750
Alignment:
Q  190 tttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  50643789 tttatgcacggtgcataaggatttccttatgcaccataac 50643750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 188 - 227
Target Start/End: Complemental strand, 51076940 - 51076901
Alignment:
Q  188 gatttatgcatggtgcatgaggatttccttatgcaccata 227  Q
    |||||||||| ||||||| |||||||||||||||||||||    
T  51076940 gatttatgcagggtgcataaggatttccttatgcaccata 51076901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 54895448 - 54895405
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||| ||||||||||||||||    
T  54895448 ggatttatgcagggtgcataaggattttcttatgcaccataacc 54895405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 237
Target Start/End: Complemental strand, 1728669 - 1728619
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataaccactcccc 237  Q
    ||||||||||| ||| ||| || |||| |||||||||||||||||||||||    
T  1728669 ggatttatgcacggtacataagaattttcttatgcaccataaccactcccc 1728619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 63 - 129
Target Start/End: Complemental strand, 29826669 - 29826604
Alignment:
Q  63 caaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    ||||||||||||| ||||||  | | ||||||||||||| ||||| ||| |||||||||||||||||    
T  29826669 caaaagttatggtacataaggaaat-ccttatgcaccgtgcataagcacttcacaaccatcagattt 29826604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 33883483 - 33883525
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    ||||||||||| ||||||| | |||||||||||||||||||||    
T  33883483 ggatttatgcagggtgcataatgatttccttatgcaccataac 33883525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 36309618 - 36309660
Alignment:
Q  188 gatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    |||||||||| ||||||| ||||||| ||||||||||||||||    
T  36309618 gatttatgcagggtgcataaggattttcttatgcaccataacc 36309660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 55782641 - 55782687
Alignment:
Q  191 ttatgcatggtgcatgaggatttccttatgcaccataaccactcccc 237  Q
    ||||||| ||||||| ||||  |||||||||||||||||||||||||    
T  55782641 ttatgcacggtgcataaggaaatccttatgcaccataaccactcccc 55782687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 55846821 - 55846867
Alignment:
Q  191 ttatgcatggtgcatgaggatttccttatgcaccataaccactcccc 237  Q
    ||||||| ||||||| ||||  |||||||||||||||||||||||||    
T  55846821 ttatgcacggtgcataaggaaatccttatgcaccataaccactcccc 55846867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 562817 - 562776
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| |||||||  |||||||||||||||||||||||    
T  562817 atttatgcagggtgcatagggatttccttatgcaccataacc 562776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 1492863 - 1492904
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||||||||| ||||  ||||||||||||||||||    
T  1492863 atttatgcatggtgcataaggaaatccttatgcaccataacc 1492904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 9813147 - 9813188
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| ||||||| | ||||||||||||||||||||||    
T  9813147 atttatgcagggtgcataaagatttccttatgcaccataacc 9813188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 31762971 - 31762930
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| | ||||| ||||||||||||||||||||||||    
T  31762971 atttatgcaggatgcataaggatttccttatgcaccataacc 31762930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Complemental strand, 33883336 - 33883295
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    |||||| || ||||||| ||||||||||||||||||||||||    
T  33883336 atttatacagggtgcataaggatttccttatgcaccataacc 33883295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 38010712 - 38010753
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| ||||||| ||||||||| ||||||||||||||    
T  38010712 atttatgcagggtgcataaggatttccgtatgcaccataacc 38010753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 43375523 - 43375564
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| ||||||| ||||||||| ||||||||||||||    
T  43375523 atttatgcagggtgcataaggatttccgtatgcaccataacc 43375564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 222
Target Start/End: Complemental strand, 48076958 - 48076921
Alignment:
Q  185 tgggatttatgcatggtgcatgaggatttccttatgca 222  Q
    ||||||||||||| ||||||| ||||||||||||||||    
T  48076958 tgggatttatgcacggtgcataaggatttccttatgca 48076921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 50070759 - 50070714
Alignment:
Q  191 ttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||| ||||||| ||||  ||||||||||||||||||||||||    
T  50070759 ttatgcacggtgcataaggaaatccttatgcaccataaccactccc 50070714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 127
Target Start/End: Original strand, 637883 - 637919
Alignment:
Q  91 ttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  637883 ttatgcaccgtgcataaacacttcacaaccatcagat 637919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 12722782 - 12722738
Alignment:
Q  187 ggatttatgcatgg-tgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| || ||||| ||||||||||||||||||||||||    
T  12722782 ggatttatgcaagggtgcataaggatttccttatgcaccataacc 12722738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 191 - 235
Target Start/End: Complemental strand, 14499291 - 14499247
Alignment:
Q  191 ttatgcatggtgcatgaggatttccttatgcaccataaccactcc 235  Q
    ||||||| ||||||| ||||  |||||||||||||||||||||||    
T  14499291 ttatgcacggtgcataaggaaatccttatgcaccataaccactcc 14499247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 190 - 226
Target Start/End: Original strand, 26447431 - 26447467
Alignment:
Q  190 tttatgcatggtgcatgaggatttccttatgcaccat 226  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  26447431 tttatgcacggtgcataaggatttccttatgcaccat 26447467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 127; Significance: 2e-65; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 61 - 236
Target Start/End: Original strand, 33684 - 33863
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||    
T  33684 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaacaaaaatggttttggctc 33783  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||| ||||||    ||||||||||||||||||||| ||||||| | ||||||||||||||||||||||| ||||    
T  33784 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaagatttccttatgcaccataaccaatccc 33863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 123; Significance: 4e-63; HSPs: 2)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 61 - 236
Target Start/End: Original strand, 24274 - 24453
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | ||||||||||||||||||||||||| |||||  ||    
T  24274 ggcaaaagttatggtgcataagccatttccttatgtaccgtgcataaacacatcacaaccattaaatttctttgattttgaacaaaaatggttttggttc 24373  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||| ||||||    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  24374 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 24453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 197 - 237
Target Start/End: Complemental strand, 44816 - 44776
Alignment:
Q  197 atggtgcatgaggatttccttatgcaccataaccactcccc 237  Q
    ||||||||| || ||||||||||||||||||||||||||||    
T  44816 atggtgcataagaatttccttatgcaccataaccactcccc 44776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 123; Significance: 4e-63; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 60 - 234
Target Start/End: Complemental strand, 16933311 - 16933132
Alignment:
Q  60 gggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgact 159  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  16933311 gggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggct 16933212  T
Q  160 cacttt-ggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactc 234  Q
    |||||| |||| ||||||    |||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||    
T  16933211 cactttggggggtgtaggaagcaattatgttgagatttatgcacggtgcataaggatttccttatgcaccataaccactc 16933132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 60 - 234
Target Start/End: Complemental strand, 16938694 - 16938515
Alignment:
Q  60 gggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgact 159  Q
    ||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  16938694 gggcaaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttgattttgaacaaaaatggttttggct 16938595  T
Q  160 cacttt-ggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactc 234  Q
    |||||| |||| ||||||    |||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||    
T  16938594 cactttggggggtgtaggaagcaattatgttgagatttatgcacggtgcataaggatttccttatgcaccataaccactc 16938515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 61 - 236
Target Start/End: Complemental strand, 30884288 - 30884109
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||    
T  30884288 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 30884189  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||| ||||||    ||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  30884188 actttgggggtgtaggaagcaattatgttaggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 30884109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 61 - 236
Target Start/End: Original strand, 46358520 - 46358699
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| ||||| |||    
T  46358520 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagattttttttattttgaacaaaaatggttttggctc 46358619  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||| ||||||    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  46358620 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 46358699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 59 - 236
Target Start/End: Original strand, 763695 - 763876
Alignment:
Q  59 agggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgac 158  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||| ||||| ||||| |    
T  763695 agggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacgtcacaaccatcagatttcttttattttgaacataaatggttttggc 763794  T
Q  159 tcactttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    || |||||||| ||||||    |||||||||||||||||||||  |||||| ||||||||||||||||||||||||||||||    
T  763795 tcgctttgggggtgtaggaagcaattatgttgggatttatgcacagtgcataaggatttccttatgcaccataaccactccc 763876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 60 - 240
Target Start/End: Original strand, 31660068 - 31660252
Alignment:
Q  60 gggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgact 159  Q
    |||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||| |||||  |    
T  31660068 gggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaataaaaatggttttggtt 31660167  T
Q  160 cactttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccccctt 240  Q
    |||||||||| ||||||    |||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  31660168 cactttgggggtgtaggaagcaattatgttgagatttatgcacggtgcataaggatttccttatgcaccataaccactccccctt 31660252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 61 - 237
Target Start/End: Original strand, 47340146 - 47340327
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaa-cacatcacaaccatcagatttctttgattttgaacaaaaatgattttgact 159  Q
    ||||||||||||||||||||||  |||| |||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||||| ||||| ||    
T  47340146 ggcaaaagttatggtgcataagttattttcttatgcaccgtgcataaaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggct 47340245  T
Q  160 cactttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactcccc 237  Q
    |||||||||| ||||||    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  47340246 cactttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactcccc 47340327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 76 - 236
Target Start/End: Original strand, 35736963 - 35737127
Alignment:
Q  76 gcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactcactttggggatgtag 175  Q
    |||||||  ||||||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||| ||||| ||||||||||||||||||    
T  35736963 gcataagttatttccttatgcaccgtgcataaacacatcacaaccatcatatttcttttattttgaacaaaaatggttttggctcactttggggatgtag 35737062  T
Q  176 g----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    |    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  35737063 gaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 35737127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 61 - 236
Target Start/End: Complemental strand, 41911175 - 41910999
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||   ||| |||||||||||||||| |||||  ||    
T  41911175 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagat---ttttattttgaacaaaaatggttttggttc 41911079  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    |||||| || ||||||    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  41911078 actttgagggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 41910999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 61 - 150
Target Start/End: Complemental strand, 20000740 - 20000651
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatg 150  Q
    |||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||    
T  20000740 ggcaaaagttatggtgcataagtcatttacttatgcaccgtgcataaacacatcacaaccatcagatttctttcactttgaacaaaaatg 20000651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 46572628 - 46572569
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  46572628 aattatgttgggatttatgcatggtgcataaggatttccttatgcaccataaccgctccc 46572569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 15973911 - 15973856
Alignment:
Q  180 tatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactcc 235  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  15973911 tatgttgggatttatgcatggtgcataaggatttccttatgcaccataaccgctcc 15973856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 5757386 - 5757452
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||||  |||||||| |||||||||||||||||| ||||||||| |||||||||||||||    
T  5757386 ggcaaaagttattatgcataagacatttccttatgcaccgtgcataaacacttcacaaccatcagat 5757452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 64 - 129
Target Start/End: Complemental strand, 11732710 - 11732645
Alignment:
Q  64 aaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    ||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||||| ||||||    
T  11732710 aaaagttatggtgcataagccattttcttatgcactgtgcataaacacttcacaaccattagattt 11732645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 48692040 - 48692093
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  48692040 aattatgttgggatttatgcacggtgcataaggatttccttatgcaccataacc 48692093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 34228675 - 34228599
Alignment:
Q  162 ctttggggatgtaggaatta-tgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactcccc 237  Q
    |||||| | |||||||| || |||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||    
T  34228675 ctttggaggtgtaggaagtagtgttgggatttatgcacggtgcataaggattttcttatgcaccataaccactcccc 34228599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 65 - 129
Target Start/End: Original strand, 34875493 - 34875557
Alignment:
Q  65 aaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    ||||||||  ||||||||||||||||||||||||| | ||||||||| |||||||||||||||||    
T  34875493 aaagttattatgcataagccatttccttatgcaccctgcataaacacttcacaaccatcagattt 34875557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 24359874 - 24359932
Alignment:
Q  64 aaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccat 122  Q
    ||||||||||||||||||| |||||||||||||||||| ||| ||||| ||||||||||    
T  24359874 aaaagttatggtgcataagtcatttccttatgcaccgtgcatcaacacttcacaaccat 24359932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 44141317 - 44141249
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    ||||||||||||  |||||||| |||||||||||||||| | ||||||||| ||||||||||| |||||    
T  44141317 ggcaaaagttatcatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatctgattt 44141249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 32685898 - 32685839
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    |||||||||| |||||||||| |||| || |||||||||||||||||||||||| |||||    
T  32685898 aattatgttgagatttatgcacggtgtataaggatttccttatgcaccataaccgctccc 32685839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 48830601 - 48830648
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  48830601 atttatgcacggtgcataaggatttccttatgcaccataaccactccc 48830648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 188 - 236
Target Start/End: Complemental strand, 11732085 - 11732037
Alignment:
Q  188 gatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    |||||||||| ||||||| |||||||||||||||||||||||| |||||    
T  11732085 gatttatgcacggtgcataaggatttccttatgcaccataaccgctccc 11732037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 15975001 - 15974934
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    ||||||||||||||||||||||  | | ||||||||||||| ||||||||| |||||||||||| ||||    
T  15975001 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcatattt 15974934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 39007715 - 39007647
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    |||||| |||||  |||||||| |||||||||||||||| | ||||||||| |||||||||||| ||||    
T  39007715 ggcaaaggttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatcatattt 39007647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 187 - 235
Target Start/End: Original strand, 46025060 - 46025108
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataaccactcc 235  Q
    ||||||||||| |||||||  ||||||||||||||||||||||||||||    
T  46025060 ggatttatgcacggtgcatagggatttccttatgcaccataaccactcc 46025108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 52 - 127
Target Start/End: Original strand, 10555940 - 10556014
Alignment:
Q  52 gatttatagggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||| || ||||||||||||||||||||||  |||| |||||||||| |||||||  | ||||||||||||||||    
T  10555940 gatttttatggcaaaagttatggtgcataag-gatttgcttatgcaccatacataaggaaatcacaaccatcagat 10556014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 26945714 - 26945757
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  26945714 ggatttatgcagggtgcataaggatttccttatgcaccataacc 26945757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 38837729 - 38837772
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  38837729 ggatttatgcaaggtgcataaggatttccttatgcaccataacc 38837772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 44426642 - 44426599
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  44426642 ggatttatgcagggtgcataaggatttccttatgcaccataacc 44426599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 59 - 129
Target Start/End: Original strand, 25778835 - 25778904
Alignment:
Q  59 agggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    ||||||||||||||||||||||||  | || ||||||||| || ||||| ||| |||||||||||||||||    
T  25778835 agggcaaaagttatggtgcataagaaaatt-cttatgcactgtgcataagcacttcacaaccatcagattt 25778904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 30428873 - 30428938
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||||||||||||||  | | ||||||||||||| ||||||||  |||||||||||||||    
T  30428873 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacatttcacaaccatcagat 30428938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 46024027 - 46024092
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    |||||||||||||||||| |||  | | ||||||||||||| ||||||||| |||||||||||||||    
T  46024027 ggcaaaagttatggtgcacaagaaaat-ccttatgcaccgtgcataaacacttcacaaccatcagat 46024092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 237
Target Start/End: Original strand, 24360756 - 24360805
Alignment:
Q  188 gatttatgcatggtgcatgaggatttccttatgcaccataaccactcccc 237  Q
    |||||||||| ||||||| |  ||||||||||||||||||||||||||||    
T  24360756 gatttatgcacggtgcataaatatttccttatgcaccataaccactcccc 24360805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 199 - 236
Target Start/End: Original strand, 33798745 - 33798782
Alignment:
Q  199 ggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  33798745 ggtgcataaggatttccttatgcaccataaccactccc 33798782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 46004537 - 46004578
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  46004537 atttatgcagggtgcataaggatttccttatgcaccataacc 46004578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 187 - 239
Target Start/End: Original strand, 44426799 - 44426851
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataaccactccccct 239  Q
    ||||||||||| ||||||| | |||||||||||||||||||||| | ||||||    
T  44426799 ggatttatgcagggtgcataaagatttccttatgcaccataaccgcgccccct 44426851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 46573563 - 46573500
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||||| ||||||||    || ||||||||||||| |||||||| |||||||||||||||    
T  46573563 ggcaaaagttatgatgcataagg---tttcttatgcaccgtatataaacacttcacaaccatcagat 46573500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 6620663 - 6620620
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    |||||||||||| |||||| |||||||| |||||||||||||||    
T  6620663 ggatttatgcatagtgcataaggatttcgttatgcaccataacc 6620620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 15974955 - 15974994
Alignment:
Q  190 tttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  15974955 tttatgcacggtgcataaggatttccttatgcaccataac 15974994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 30428919 - 30428880
Alignment:
Q  190 tttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  30428919 tttatgcacggtgcataaggatttccttatgcaccataac 30428880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 31365315 - 31365272
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||    
T  31365315 ggatttatgcaagatgcataaggatttccttatgcaccataacc 31365272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 34227720 - 34227677
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||    
T  34227720 ggatttatgcaggttgcataaggatttccttatgcaccataacc 34227677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 43742293 - 43742250
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| | ||||| ||||||||||||||||||||||||    
T  43742293 ggatttatgcaggatgcataaggatttccttatgcaccataacc 43742250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 118
Target Start/End: Complemental strand, 6797451 - 6797394
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaa 118  Q
    ||||||||||||  |||||||| |||||||||||||| | | ||||||||| ||||||    
T  6797451 ggcaaaagttattatgcataagtcatttccttatgcatcctgcataaacacttcacaa 6797394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 7845099 - 7845140
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| | ||||| ||||||||||||||||||||||||    
T  7845099 atttatgcaggttgcataaggatttccttatgcaccataacc 7845140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 236
Target Start/End: Original strand, 12286723 - 12286768
Alignment:
Q  191 ttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    |||||||  |||||| | ||||||||||||||||||||||||||||    
T  12286723 ttatgcactgtgcataaagatttccttatgcaccataaccactccc 12286768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 34227878 - 34227919
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| ||||||| || |||||||||||||||||||||    
T  34227878 atttatgcagggtgcataagaatttccttatgcaccataacc 34227919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 41065971 - 41066012
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| ||| ||| ||||||||||||||||||||||||    
T  41065971 atttatgcagggtacataaggatttccttatgcaccataacc 41066012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 48306341 - 48306392
Alignment:
Q  176 gaattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    |||||||||||||||||||||| ||||||| || |   |||||||||||||||||    
T  48306341 gaattatgttgggatttatgcacggtgcataagaa---ccttatgcaccataacc 48306392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 119; Significance: 9e-61; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 61 - 236
Target Start/End: Original strand, 19784271 - 19784450
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||    
T  19784271 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 19784370  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    |||||| || ||||||    |||||||||||||||||||||   ||||| |||||||||||||||| |||||||||||||    
T  19784371 actttgagggtgtaggaagcaattatgttgggatttatgcacaatgcataaggatttccttatgcatcataaccactccc 19784450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 59 - 236
Target Start/End: Complemental strand, 34633389 - 34633208
Alignment:
Q  59 agggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgac 158  Q
    ||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |    
T  34633389 agggcaaaagttatggtacataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggc 34633290  T
Q  159 tcactttggggatgt----aggaattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    |||||||| || |||    || ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  34633289 tcactttgagggtgtaagaagcaattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 34633208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 61 - 236
Target Start/End: Original strand, 41099182 - 41099364
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||| |||    
T  41099182 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatggttttggctc 41099281  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcat---gaggatttccttatgcaccataaccactccc 236  Q
    ||||||||| ||||||    ||||||||||||||||||||| |||||||   || ||||||||||||||||||||||||||||    
T  41099282 actttgggggtgtaggaagcaattatgttgggatttatgcacggtgcataaggatgatttccttatgcaccataaccactccc 41099364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 61 - 236
Target Start/End: Original strand, 10237354 - 10237533
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| ||||| |||    
T  10237354 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagattttttttattttgaacaaaaatggttttggctc 10237453  T
Q  161 actttggggatgt----aggaattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||| |||    || |||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||    
T  10237454 actttgggggtgtagaaagcaattatgttgggatttatacacggtgcataaggatttccttatgcaccataaccactccc 10237533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 61 - 236
Target Start/End: Original strand, 41451105 - 41451284
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||||||||| |||||||||||||||| ||||| |||    
T  41451105 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacgtcacaatcatcagatttcttttattttgaacaaaaatggttttggctc 41451204  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||| | ||||||    |||||||||||||||||||||  |||||| ||||||||||||| ||||||||||||||||    
T  41451205 actttggaggtgtaggaagcaattatgttgggatttatgcacagtgcataaggatttccttatacaccataaccactccc 41451284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 61 - 237
Target Start/End: Original strand, 30413914 - 30414094
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||| ||||  |||    
T  30413914 ggcaaaagttatgctgcataagtcatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttaattttgaacaaaaatggttttacctc 30414013  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactcccc 237  Q
    ||| | | ||||||||    ||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||    
T  30414014 actctagagatgtaggaagcaattatgttgggatttatgcacggtgcataaagatttccttatgcaccataaccactcccc 30414094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 61 - 236
Target Start/End: Complemental strand, 1150089 - 1149910
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||| ||||||||||||| |||||||||||||||||||||| |||||||| |||||||||||||||| ||||| |||    
T  1150089 ggcaaaagttatggtgcataagttattcccttatgcaccgtgcataaacacatcacaaccatcatatttcttttattttgaacaaaaatggttttggctc 1149990  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||| | ||||||    ||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  1149989 actttggaggtgtaggaagcaattatgttggaatttatgcacggtgcataaggatttccttatgcaccataaccactccc 1149910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 61 - 236
Target Start/End: Original strand, 15227030 - 15227209
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||||||||||| ||||| |||    
T  15227030 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacattacaaccatcagatttcttttattttgaacaaaaatggttttggctc 15227129  T
Q  161 actttggggatgtagg----aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    |||||  | |||||||    ||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||    
T  15227130 actttaagaatgtaggaagcaattatgttgggatttatgtacggtgcataaggatttccttatgcaccataaccactccc 15227209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 61 - 237
Target Start/End: Original strand, 43690640 - 43690810
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||||||| ||||| |||    
T  43690640 ggcaaaagttatggtgcataagttatttccttatgcaccgtgcataaacacatcacaaccatcagattttttttattttgaacaaaaatggttttggctc 43690739  T
Q  161 actttggggatgt----aggaattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactcccc 237  Q
    ||||||||| |||    || ||||||||||||||||||||| ||          |||||||||||||||||||||||||||    
T  43690740 actttgggggtgtagaaagcaattatgttgggatttatgcacgg----------tttccttatgcaccataaccactcccc 43690810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 61 - 197
Target Start/End: Original strand, 7857680 - 7857820
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    |||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||| |||||||||| ||| |||||||||||||||| ||||| |||    
T  7857680 ggcaaaagttatggtgcataagccattttcttatgcgccgtgcataaacacatcacaatcatcagatttttttaattttgaacaaaaatggttttggctc 7857779  T
Q  161 actttggggatgtagg----aattatgttgggatttatgca 197  Q
    ||||||||| ||||||    |||||||||||||||||||||    
T  7857780 actttgggggtgtaggaagcaattatgttgggatttatgca 7857820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 4835572 - 4835513
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||    
T  4835572 aattatgttgggatttatgcacggtgcataaggatttccttatgcaccataaccgctccc 4835513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 64 - 122
Target Start/End: Original strand, 9852273 - 9852331
Alignment:
Q  64 aaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccat 122  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||    
T  9852273 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacttcacaaccat 9852331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 34648191 - 34648133
Alignment:
Q  64 aaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccat 122  Q
    ||||||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||    
T  34648191 aaaagttatggtgcataagtcatttccttatgcaccgtgcataaacacttcacaaccat 34648133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 177 - 230
Target Start/End: Complemental strand, 39657762 - 39657709
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||    
T  39657762 aattatgttgggatttatgcacggtgcataaggatttccttatgcaccataacc 39657709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 1209776 - 1209827
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataa 228  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||||||||||    
T  1209776 aattatgttgggatttatgcacggtgcataaggatttccttatgcaccataa 1209827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 15260917 - 15260854
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatca 124  Q
    ||||||||||||||||||||||   |||||||||||||||| ||||||||| ||||||||||||    
T  15260917 ggcaaaagttatggtgcataaggattttccttatgcaccgtgcataaacacttcacaaccatca 15260854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 23397441 - 23397492
Alignment:
Q  185 tgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||| ||||    
T  23397441 tgggatttatgcatggtgcataaggatttccttatgcaccataaccattccc 23397492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 122
Target Start/End: Original strand, 23396484 - 23396538
Alignment:
Q  68 gttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccat 122  Q
    |||||||||||||||||||||||||||||||||| ||||||||| | ||||||||    
T  23396484 gttatggtgcataagccatttccttatgcaccgtgcataaacactttacaaccat 23396538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 188 - 237
Target Start/End: Complemental strand, 35301672 - 35301623
Alignment:
Q  188 gatttatgcatggtgcatgaggatttccttatgcaccataaccactcccc 237  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||    
T  35301672 gatttatgcacggtgcataaggatttccttatgcaccataaccactcccc 35301623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 177 - 236
Target Start/End: Original strand, 2751225 - 2751284
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||||||||| ||||| ||||||| ||||||| |||||||||||||||| |||||    
T  2751225 aattatgttgggattcatgcacggtgcataaggattttcttatgcaccataaccgctccc 2751284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 237
Target Start/End: Complemental strand, 15259903 - 15259849
Alignment:
Q  183 gttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactcccc 237  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||| ||||||    
T  15259903 gttgggatttatgcacggtgcataaggatttccttatgccccataaccgctcccc 15259849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 32987510 - 32987445
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||||||||||||||  | | ||||||||||||| ||||||||| |||||||||||||||    
T  32987510 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagat 32987445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 35302649 - 35302591
Alignment:
Q  64 aaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccat 122  Q
    ||||||||||||||||| | ||||| |||||||||||| ||||||||| ||||||||||    
T  35302649 aaaagttatggtgcataggacattttcttatgcaccgtgcataaacacttcacaaccat 35302591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 64 - 110
Target Start/End: Complemental strand, 40023325 - 40023279
Alignment:
Q  64 aaaagttatggtgcataagccatttccttatgcaccgtacataaaca 110  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||    
T  40023325 aaaagttatggtgcataagccatttccttatacaccgtgcataaaca 40023279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 59 - 129
Target Start/End: Original strand, 42433699 - 42433768
Alignment:
Q  59 agggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    ||||||||||||||||||||||||  | | ||||||||||||| ||||| ||| |||||||||||||||||    
T  42433699 agggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataagcacttcacaaccatcagattt 42433768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 177 - 230
Target Start/End: Original strand, 7059155 - 7059208
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||||| ||||||| | ||||||||||||||||||||||    
T  7059155 aattatgttggaatttatgcacggtgcataatgatttccttatgcaccataacc 7059208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 13526733 - 13526669
Alignment:
Q  65 aaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    ||||||||  ||||||||||||||||||||| ||  | ||||||||| |||||||||||||||||    
T  13526733 aaagttattatgcataagccatttccttatgtactctgcataaacacttcacaaccatcagattt 13526669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 13616268 - 13616204
Alignment:
Q  65 aaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    ||||||||  ||||||||||||||||||||| ||  | ||||||||| |||||||||||||||||    
T  13616268 aaagttattatgcataagccatttccttatgtactctgcataaacacttcacaaccatcagattt 13616204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 4841017 - 4840974
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatg 220  Q
    ||||||||||||||||||||| ||||||| ||||||||||||||    
T  4841017 aattatgttgggatttatgcacggtgcataaggatttccttatg 4840974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 17792892 - 17792935
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  17792892 ggatttatgcagggtgcataaggatttccttatgcaccataacc 17792935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 35448610 - 35448653
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  35448610 ggatttatgcagggtgcataaggatttccttatgcaccataacc 35448653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 60 - 127
Target Start/End: Original strand, 39021974 - 39022040
Alignment:
Q  60 gggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    |||||||||||||||||||||||  | | ||||||||||||| ||||||||| |||||| ||||||||    
T  39021974 gggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaatcatcagat 39022040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 65 - 124
Target Start/End: Complemental strand, 40247347 - 40247288
Alignment:
Q  65 aaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatca 124  Q
    ||||||||  |||||||| |||||||||||||||| | ||||||||| ||||||||||||    
T  40247347 aaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaaccatca 40247288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 239
Target Start/End: Complemental strand, 185923 - 185873
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataaccactccccct 239  Q
    |||||||||  |||||| |||||||||||||||||||||||||| ||||||    
T  185923 atttatgcagagtgcataaggatttccttatgcaccataaccacaccccct 185873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 229
Target Start/End: Original strand, 1672931 - 1672973
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    ||||||||||| ||||||| |||||||||||||||||||||||    
T  1672931 ggatttatgcagggtgcataaggatttccttatgcaccataac 1672973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 187 - 229
Target Start/End: Complemental strand, 27506750 - 27506708
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    ||||||||||| ||||||| |||||||||||||||||||||||    
T  27506750 ggatttatgcagggtgcataaggatttccttatgcaccataac 27506708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 118
Target Start/End: Original strand, 2522867 - 2522924
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaa 118  Q
    ||||||||||||  |||||||| |||||||||||||||| | ||||||||| ||||||    
T  2522867 ggcaaaagttattatgcataagtcatttccttatgcaccctgcataaacacttcacaa 2522924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 240
Target Start/End: Complemental strand, 15808929 - 15808876
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataaccactccccctt 240  Q
    ||||||||||| ||||||| ||||||| |||||||||||||||| | |||||||    
T  15808929 ggatttatgcagggtgcataaggattttcttatgcaccataaccgcaccccctt 15808876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 21120236 - 21120195
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataa 228  Q
    ||||||||||||||||||| |||||||| |||||||||||||    
T  21120236 ggatttatgcatggtgcataaggatttcattatgcaccataa 21120195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 188 - 233
Target Start/End: Complemental strand, 34647214 - 34647169
Alignment:
Q  188 gatttatgcatggtgcatgaggatttccttatgcaccataaccact 233  Q
    ||||||| || ||||||| |||||||||||||||||||||||||||    
T  34647214 gatttatacacggtgcataaggatttccttatgcaccataaccact 34647169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 127
Target Start/End: Original strand, 8550529 - 8550569
Alignment:
Q  87 ttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  8550529 ttccttatgcaccgtgcataaacacttcacaaccatcagat 8550569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 40012249 - 40012186
Alignment:
Q  59 agggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatc 123  Q
    ||||||||||||||||||||||||  ||||||||||||||| | |||||| || | |||||||||    
T  40012249 agggcaaaagttatggtgcataag-gatttccttatgcaccatgcataaagactttacaaccatc 40012186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 1208755 - 1208716
Alignment:
Q  190 tttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  1208755 tttatgcacggtgcataaggatttccttatgcaccataac 1208716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 9853254 - 9853305
Alignment:
Q  185 tgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    |||||||||||||  |||||| |||||||  |||||||||||||||||||||    
T  9853254 tgggatttatgcacagtgcataaggatttttttatgcaccataaccactccc 9853305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 17656662 - 17656619
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    |||||||||||  |||||| ||||||||||||||||||||||||    
T  17656662 ggatttatgcagagtgcataaggatttccttatgcaccataacc 17656619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 23567530 - 23567487
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    |||||||||||  |||||| ||||||||||||||||||||||||    
T  23567530 ggatttatgcagagtgcataaggatttccttatgcaccataacc 23567487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 23567643 - 23567686
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| || |||||||||||||||||||||    
T  23567643 ggatttatgcagggtgcataagaatttccttatgcaccataacc 23567686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 32987464 - 32987503
Alignment:
Q  190 tttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  32987464 tttatgcacggtgcataaggatttccttatgcaccataac 32987503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 229
Target Start/End: Complemental strand, 39022021 - 39021982
Alignment:
Q  190 tttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  39022021 tttatgcacggtgcataaggatttccttatgcaccataac 39021982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 1208709 - 1208774
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||||||||||||||  | | ||||||||||||| ||||||||| | |||||||| ||||    
T  1208709 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacactttacaaccataagat 1208774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 65 - 111
Target Start/End: Complemental strand, 10443632 - 10443586
Alignment:
Q  65 aaagttatggtgcataagccatttccttatgcaccgtacataaacac 111  Q
    ||||||||  ||||||||||||||||||||||||| | |||||||||    
T  10443632 aaagttattatgcataagccatttccttatgcaccctgcataaacac 10443586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 230
Target Start/End: Complemental strand, 10585903 - 10585861
Alignment:
Q  188 gatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    |||||||||||||||||| ||||||| |||||||||| |||||    
T  10585903 gatttatgcatggtgcataaggattttcttatgcaccgtaacc 10585861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 12355422 - 12355488
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||||   ||||||| ||||| |||||||||| | ||||||||| |||||||||| ||||    
T  12355422 ggcaaaagttattacgcataagtcattttcttatgcaccctgcataaacacttcacaaccattagat 12355488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 188 - 230
Target Start/End: Original strand, 18757329 - 18757371
Alignment:
Q  188 gatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    |||||||||| ||||||| |||||||| |||||||||||||||    
T  18757329 gatttatgcagggtgcataaggatttctttatgcaccataacc 18757371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 229
Target Start/End: Complemental strand, 42433746 - 42433708
Alignment:
Q  191 ttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    ||||||| ||||||| |||||||||||||||||||||||    
T  42433746 ttatgcacggtgcataaggatttccttatgcaccataac 42433708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 191 - 237
Target Start/End: Original strand, 42434566 - 42434612
Alignment:
Q  191 ttatgcatggtgcatgaggatttccttatgcaccataaccactcccc 237  Q
    ||||||| ||||||| ||||  |||||||||||||||||||||||||    
T  42434566 ttatgcacggtgcataaggaaatccttatgcaccataaccactcccc 42434612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 127
Target Start/End: Complemental strand, 4836738 - 4836701
Alignment:
Q  90 cttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  4836738 cttatgcaccgtgcataaacacttcacaaccatcagat 4836701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 90 - 127
Target Start/End: Complemental strand, 4842183 - 4842146
Alignment:
Q  90 cttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    |||||||||||| ||||||||| |||||||||||||||    
T  4842183 cttatgcaccgtgcataaacacttcacaaccatcagat 4842146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 10586063 - 10586104
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| ||||||| |||||||||||||||| |||||||    
T  10586063 atttatgcagggtgcataaggatttccttatgcatcataacc 10586104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 15809842 - 15809883
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||| | ||||||| ||||||||||||||||||||||||    
T  15809842 atttatggagggtgcataaggatttccttatgcaccataacc 15809883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 24473246 - 24473287
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    |||||| || ||||||| ||||||||||||||||||||||||    
T  24473246 atttatacagggtgcataaggatttccttatgcaccataacc 24473287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 129
Target Start/End: Complemental strand, 28698643 - 28698578
Alignment:
Q  65 aaagttatggtgcataagccatttccttatgcaccgtaca-taaacacatcacaaccatcagattt 129  Q
    ||||||||  |||||||||||||| |||||||||| | || ||||||  |||||||||||||||||    
T  28698643 aaagttattatgcataagccattttcttatgcaccctgcattaaacatttcacaaccatcagattt 28698578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 233
Target Start/End: Complemental strand, 40022419 - 40022386
Alignment:
Q  200 gtgcatgaggatttccttatgcaccataaccact 233  Q
    |||||| |||||||||||||||||||||||||||    
T  40022419 gtgcataaggatttccttatgcaccataaccact 40022386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0581 (Bit Score: 94; Significance: 8e-46; HSPs: 1)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 61 - 211
Target Start/End: Complemental strand, 8487 - 8333
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaacaaaaatgattttgactc 160  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| |||||||||||||||  ||||| |||    
T  8487 ggcaaaagttatggtgcataagccatttccttatgcactgtgcataaacacatcacaaccatcagatttcttttattttgaacaaaaatagttttggctc 8388  T
Q  161 actttggggatgt----aggaattatgttgggatttatgcatggtgcatgaggat 211  Q
    |||||| || |||    || ||||||||||||||||||||| ||||||| |||||    
T  8387 actttgagggtgtagaaagcaattatgttgggatttatgcacggtgcataaggat 8333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571 (Bit Score: 74; Significance: 7e-34; HSPs: 2)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 742 - 661
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagatttctttgattttgaa 142  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  742 ggcaaaagttatggtgcataagccatttccttatgcaccgtgcataaacacatcacaaccatcagatttctttcattttgaa 661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0571; HSP #2
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 141 - 236
Target Start/End: Complemental strand, 639 - 540
Alignment:
Q  141 aacaaaaatgattttgactcactttggggatgtaggaa----ttatgttgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    |||||||||| ||||| |||||||||||| ||||||||    |||| |||||||||||||| ||||||| ||||||||||||||||||||||||||||||    
T  639 aacaaaaatggttttggctcactttgggggtgtaggaagcaattatattgggatttatgcacggtgcataaggatttccttatgcaccataaccactccc 540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 177 - 229
Target Start/End: Original strand, 6503 - 6555
Alignment:
Q  177 aattatgttgggatttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6503 aattatgttgggatttatgcatggtgcataaggatttccttatgcaccataac 6555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 61 - 129
Target Start/End: Complemental strand, 25297 - 25230
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    ||||||||||||||||||||||  | | ||||||||||||| ||||||||| |||||||||||||||||    
T  25297 ggcaaaagttatggtgcataaggaaat-ccttatgcaccgtgcataaacacttcacaaccatcagattt 25230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 190 - 229
Target Start/End: Original strand, 25251 - 25290
Alignment:
Q  190 tttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    |||||||| ||||||| |||||||||||||||||||||||    
T  25251 tttatgcacggtgcataaggatttccttatgcaccataac 25290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Original strand, 1248 - 1291
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  1248 ggatttatgcagggtgcataaggatttccttatgcaccataacc 1291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 230
Target Start/End: Complemental strand, 23588 - 23545
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||    
T  23588 ggatttatgcagggtgcataaggatttccttatgcaccataacc 23545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 228
Target Start/End: Original strand, 23736 - 23776
Alignment:
Q  188 gatttatgcatggtgcatgaggatttccttatgcaccataa 228  Q
    |||||||||| ||||||| ||||||||||||||||||||||    
T  23736 gatttatgcagggtgcataaggatttccttatgcaccataa 23776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 230
Target Start/End: Complemental strand, 33659 - 33617
Alignment:
Q  188 gatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    |||||||||| ||||||| ||||||||||||||||||||||||    
T  33659 gatttatgcagggtgcataaggatttccttatgcaccataacc 33617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 127
Target Start/End: Original strand, 13613 - 13678
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||||||||||||||  | | |||||| |||||| ||||||||| |||||||||||||||    
T  13613 ggcaaaagttatggtgcataaggaaat-ccttatccaccgtgcataaacacttcacaaccatcagat 13678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 127
Target Start/End: Complemental strand, 19045 - 18980
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    ||||||||||||||||||||||  |||| |||||||||| |||||||  | ||||||||||||||||    
T  19045 ggcaaaagttatggtgcataagg-atttgcttatgcaccatacataaggaaatcacaaccatcagat 18980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 191 - 234
Target Start/End: Complemental strand, 21017 - 20974
Alignment:
Q  191 ttatgcatggtgcatgaggatttccttatgcaccataaccactc 234  Q
    ||||||| ||||||| ||||||| ||||||||||||||||||||    
T  21017 ttatgcacggtgcataaggattttcttatgcaccataaccactc 20974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 10739 - 10675
Alignment:
Q  62 gcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagat 127  Q
    |||||||||||||||||||||  | | |||||| |||||| ||||||||| |||||||||||||||    
T  10739 gcaaaagttatggtgcataaggaaat-ccttatacaccgtgcataaacacttcacaaccatcagat 10675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 189 - 230
Target Start/End: Original strand, 20122 - 20163
Alignment:
Q  189 atttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    ||||||||| ||||||| ||||||||||||||||||||||||    
T  20122 atttatgcagggtgcataaggatttccttatgcaccataacc 20163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 164058 - 164118
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccat 122  Q
    |||||||| |||||||||||||  ||||||||||||||| ||||||| || |||||||||||    
T  164058 ggcaaaagctatggtgcataagg-atttccttatgcaccatacataagcaaatcacaaccat 164118  T

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Target: scaffold0009 (Bit Score: 34; Significance: 0.0000000005; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 187 - 228
Target Start/End: Complemental strand, 51949 - 51908
Alignment:
Q  187 ggatttatgcatggtgcatgaggatttccttatgcaccataa 228  Q
    ||||||||||| ||||||| ||||||||||||||||||||||    
T  51949 ggatttatgcagggtgcataaggatttccttatgcaccataa 51908  T

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Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 185 - 230
Target Start/End: Complemental strand, 202958 - 202913
Alignment:
Q  185 tgggatttatgcatggtgcatgaggatttccttatgcaccataacc 230  Q
    |||||||| |||| ||||||| | ||||||||||||||||||||||    
T  202958 tgggatttgtgcacggtgcataatgatttccttatgcaccataacc 202913  T

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Target: scaffold0194 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 185 - 236
Target Start/End: Original strand, 28673 - 28724
Alignment:
Q  185 tgggatttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||||| ||| ||||||  |||||||||||||||||||||||| |||||    
T  28673 tgggatttaagcacggtgcaaaaggatttccttatgcaccataaccgctccc 28724  T

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Target: scaffold0558 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0558
Description:

Target: scaffold0558; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 2448 - 2508
Alignment:
Q  62 gcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatc 123  Q
    ||||||||||||||| |||||  ||||||||||||||||| |||||  | ||||||||||||    
T  2448 gcaaaagttatggtgtataagg-atttccttatgcaccgtgcataaggaaatcacaaccatc 2508  T

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Target: scaffold0558; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 123
Target Start/End: Original strand, 5860 - 5920
Alignment:
Q  62 gcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatc 123  Q
    ||||||||||||||| |||||  ||||||||||||||||| |||||  | ||||||||||||    
T  5860 gcaaaagttatggtgtataagg-atttccttatgcaccgtgcataaggaaatcacaaccatc 5920  T

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Target: scaffold0460 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 118
Target Start/End: Original strand, 1604 - 1661
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaa 118  Q
    ||||||| ||||  |||||||| |||||||||||||||| | ||||||||| ||||||    
T  1604 ggcaaaaattattatgcataagtcatttccttatgcaccctgcataaacacttcacaa 1661  T

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Target: scaffold0221 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 20524 - 20479
Alignment:
Q  191 ttatgcatggtgcatgaggatttccttatgcaccataaccactccc 236  Q
    ||||||| ||||||| ||||  ||||||||||||||||||||||||    
T  20524 ttatgcacggtgcataaggaaatccttatgcaccataaccactccc 20479  T

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Target: scaffold0189 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 129
Target Start/End: Complemental strand, 11256 - 11188
Alignment:
Q  60 gggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaaccatcagattt 129  Q
    |||||||||||||||||||||||  |  ||||||||||| || ||||| ||| |||||||||||| ||||    
T  11256 gggcaaaagttatggtgcataag-gaaatccttatgcactgtgcataagcacttcacaaccatcatattt 11188  T

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Target: scaffold0006 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 118
Target Start/End: Original strand, 209326 - 209383
Alignment:
Q  61 ggcaaaagttatggtgcataagccatttccttatgcaccgtacataaacacatcacaa 118  Q
    ||||||||||||  |||||||| ||||| |||||||||| | ||||||||| ||||||    
T  209326 ggcaaaagttattatgcataagtcattttcttatgcaccctgcataaacacttcacaa 209383  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 188 - 229
Target Start/End: Complemental strand, 96042 - 96001
Alignment:
Q  188 gatttatgcatggtgcatgaggatttccttatgcaccataac 229  Q
    |||||||||| ||||||| ||||||| |||||||||||||||    
T  96042 gatttatgcagggtgcataaggattttcttatgcaccataac 96001  T

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