View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1406_low_22 (Length: 333)

Name: NF1406_low_22
Description: NF1406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1406_low_22
NF1406_low_22
[»] chr7 (22 HSPs)
chr7 (13-327)||(25791467-25791776)
chr7 (75-144)||(22602707-22602777)
chr7 (75-156)||(1433434-1433516)
chr7 (79-156)||(19206030-19206108)
chr7 (75-155)||(21828402-21828483)
chr7 (75-151)||(32308105-32308182)
chr7 (78-165)||(9482905-9482993)
chr7 (75-156)||(26329379-26329461)
chr7 (75-156)||(27945021-27945103)
chr7 (81-144)||(3520345-3520409)
chr7 (75-150)||(6630909-6630985)
chr7 (104-156)||(11722125-11722177)
chr7 (78-149)||(20549778-20549850)
chr7 (107-170)||(20545266-20545329)
chr7 (78-156)||(26733284-26733363)
chr7 (75-156)||(18215183-18215265)
chr7 (75-156)||(21138993-21139072)
chr7 (106-168)||(23191864-23191926)
chr7 (75-167)||(5548646-5548738)
chr7 (118-159)||(11072275-11072316)
chr7 (84-156)||(43249973-43250046)
chr7 (104-156)||(10042917-10042969)
[»] chr6 (28 HSPs)
chr6 (78-158)||(20371110-20371191)
chr6 (78-167)||(7265593-7265683)
chr6 (75-156)||(9027158-9027240)
chr6 (78-149)||(7377966-7378038)
chr6 (78-156)||(5732510-5732589)
chr6 (78-144)||(9629375-9629442)
chr6 (80-156)||(9658859-9658936)
chr6 (78-156)||(426514-426593)
chr6 (78-144)||(19040344-19040411)
chr6 (83-156)||(30866149-30866223)
chr6 (77-133)||(9617437-9617494)
chr6 (104-156)||(17341691-17341743)
chr6 (75-154)||(26562671-26562751)
chr6 (104-159)||(17841616-17841671)
chr6 (75-141)||(32320666-32320733)
chr6 (78-144)||(33001289-33001356)
chr6 (75-128)||(9025491-9025545)
chr6 (75-156)||(10294087-10294169)
chr6 (79-156)||(13851716-13851794)
chr6 (75-144)||(16488587-16488657)
chr6 (75-156)||(16766677-16766759)
chr6 (75-144)||(18367828-18367898)
chr6 (105-167)||(19147431-19147493)
chr6 (75-156)||(34073344-34073426)
chr6 (75-155)||(677818-677899)
chr6 (80-128)||(32299283-32299332)
chr6 (104-160)||(10842508-10842564)
chr6 (75-122)||(13815456-13815504)
[»] chr8 (13 HSPs)
chr8 (81-168)||(31236580-31236668)
chr8 (78-167)||(34897054-34897144)
chr8 (78-150)||(4786338-4786411)
chr8 (75-143)||(11944658-11944727)
chr8 (75-141)||(11927083-11927150)
chr8 (114-157)||(31109555-31109598)
chr8 (75-156)||(22651956-22652038)
chr8 (75-156)||(24362199-24362281)
chr8 (83-156)||(27213527-27213601)
chr8 (78-150)||(13844596-13844669)
chr8 (76-150)||(39954277-39954352)
chr8 (75-163)||(15816126-15816215)
chr8 (104-167)||(30271318-30271382)
[»] chr1 (24 HSPs)
chr1 (75-167)||(6427314-6427412)
chr1 (79-155)||(2896122-2896199)
chr1 (79-158)||(6415002-6415082)
chr1 (80-150)||(13997869-13997940)
chr1 (79-160)||(36878437-36878519)
chr1 (78-156)||(9709800-9709879)
chr1 (104-150)||(21530675-21530721)
chr1 (79-167)||(1815226-1815315)
chr1 (104-156)||(398792-398844)
chr1 (78-149)||(29163381-29163453)
chr1 (85-156)||(32724105-32724177)
chr1 (80-138)||(1864882-1864941)
chr1 (78-156)||(52903229-52903308)
chr1 (75-156)||(1486706-1486788)
chr1 (75-156)||(5376497-5376579)
chr1 (75-144)||(9828036-9828106)
chr1 (83-156)||(10577740-10577814)
chr1 (75-156)||(20157347-20157429)
chr1 (79-156)||(38503300-38503378)
chr1 (78-167)||(39953146-39953236)
chr1 (75-167)||(1704989-1705082)
chr1 (104-157)||(9103619-9103672)
chr1 (75-123)||(44482243-44482292)
chr1 (104-156)||(1262864-1262916)
[»] chr2 (14 HSPs)
chr2 (81-156)||(23718006-23718082)
chr2 (81-156)||(24105678-24105754)
chr2 (86-156)||(21616742-21616813)
chr2 (78-159)||(37558954-37559036)
chr2 (104-156)||(30404877-30404929)
chr2 (79-158)||(42832277-42832357)
chr2 (78-156)||(20242727-20242806)
chr2 (104-167)||(27084231-27084294)
chr2 (75-160)||(30527592-30527678)
chr2 (75-156)||(34784979-34785061)
chr2 (75-136)||(44860320-44860382)
chr2 (118-167)||(34994017-34994066)
chr2 (80-144)||(39279667-39279732)
chr2 (120-156)||(16069297-16069333)
[»] scaffold0004 (1 HSPs)
scaffold0004 (104-167)||(92776-92839)
[»] chr5 (20 HSPs)
chr5 (75-160)||(3966478-3966565)
chr5 (73-155)||(16734847-16734932)
chr5 (82-167)||(30098294-30098381)
chr5 (78-144)||(28588674-28588741)
chr5 (75-167)||(39205849-39205942)
chr5 (75-167)||(39698510-39698603)
chr5 (104-156)||(7175046-7175098)
chr5 (77-160)||(11685916-11685999)
chr5 (104-156)||(19552570-19552622)
chr5 (75-156)||(6401478-6401560)
chr5 (77-166)||(10298539-10298629)
chr5 (101-151)||(17123033-17123083)
chr5 (75-144)||(21814253-21814323)
chr5 (104-157)||(27144442-27144495)
chr5 (79-167)||(42893329-42893418)
chr5 (75-150)||(2436908-2436984)
chr5 (75-150)||(6035469-6035544)
chr5 (104-156)||(9449449-9449501)
chr5 (104-156)||(14674249-14674301)
chr5 (75-150)||(31084309-31084385)
[»] scaffold0036 (1 HSPs)
scaffold0036 (75-167)||(9744-9835)
[»] chr4 (12 HSPs)
chr4 (75-167)||(22234887-22234981)
chr4 (76-156)||(13783261-13783342)
chr4 (77-150)||(35723383-35723458)
chr4 (75-156)||(5414169-5414251)
chr4 (75-156)||(40742571-40742653)
chr4 (75-160)||(46160873-46160958)
chr4 (104-157)||(7012045-7012098)
chr4 (75-156)||(30982875-30982954)
chr4 (79-137)||(5775359-5775418)
chr4 (83-144)||(40613442-40613504)
chr4 (75-167)||(46083988-46084080)
chr4 (104-156)||(20521876-20521928)
[»] scaffold0110 (1 HSPs)
scaffold0110 (75-143)||(28843-28912)
[»] chr3 (21 HSPs)
chr3 (104-167)||(5339077-5339140)
chr3 (78-156)||(8383237-8383316)
chr3 (78-156)||(25093482-25093561)
chr3 (115-160)||(21720740-21720785)
chr3 (75-167)||(25948884-25948977)
chr3 (25-156)||(4990914-4991046)
chr3 (78-167)||(13845525-13845613)
chr3 (104-167)||(23870586-23870649)
chr3 (75-144)||(8039832-8039902)
chr3 (78-160)||(10318035-10318117)
chr3 (75-144)||(16192747-16192817)
chr3 (78-167)||(18426918-18427008)
chr3 (104-166)||(29112307-29112369)
chr3 (78-138)||(7928448-7928509)
chr3 (84-156)||(24205047-24205120)
chr3 (78-150)||(35222924-35222997)
chr3 (104-152)||(2620080-2620128)
chr3 (78-149)||(8789550-8789622)
chr3 (104-156)||(10268513-10268565)
chr3 (106-150)||(26290357-26290401)
chr3 (104-144)||(32804567-32804607)
[»] scaffold0697 (1 HSPs)
scaffold0697 (104-150)||(1630-1676)
[»] scaffold0018 (1 HSPs)
scaffold0018 (104-153)||(192276-192325)
[»] scaffold0007 (1 HSPs)
scaffold0007 (84-156)||(225274-225347)
[»] scaffold0103 (1 HSPs)
scaffold0103 (104-159)||(51788-51843)
[»] scaffold0168 (1 HSPs)
scaffold0168 (75-156)||(21023-21105)
[»] scaffold0020 (1 HSPs)
scaffold0020 (75-156)||(135309-135391)
[»] scaffold0085 (1 HSPs)
scaffold0085 (84-144)||(26385-26446)
[»] scaffold0306 (1 HSPs)
scaffold0306 (104-156)||(13380-13432)
[»] scaffold0152 (1 HSPs)
scaffold0152 (104-156)||(21895-21947)
[»] scaffold0027 (1 HSPs)
scaffold0027 (104-156)||(46662-46714)


Alignment Details
Target: chr7 (Bit Score: 220; Significance: 1e-121; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 13 - 327
Target Start/End: Complemental strand, 25791776 - 25791467
Alignment:
Q  13 aatatggaataaatgaagtacggacactccccggattagacgtgtcgcaatgtctgatatttacacgacaccgacacatataactacattgattatgtga 112  Q
    |||||||||||||||||||||||| |||||  ||||||||||| ||||| ||| ||| || |||||||||||||||||||||||||||||||||||||||    
T  25791776 aatatggaataaatgaagtacggatactccttggattagacgtttcgcagtgtttgacatctacacgacaccgacacatataactacattgattatgtga 25791677  T
Q  113 atttctcaaataattaacggtgtcggcgtgtc------tgtgtccgtgtccgtgcttcatattatggataggattatggaaatgcaatgaatttcttcca 206  Q
    |||||||||||||||| |||||||||||||||      ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||      
T  25791676 atttctcaaataattagcggtgtcggcgtgtcagtgtctgtgtccgtatccgtgcttcatattatggataggattatggaaatgcaatgaatttcttc-- 25791579  T
Q  207 gttcatgctttatgttttgaaaattgtggaaatggaaacaaaatcaaaacctcaaatatagattactatcagatattgggttttacatgagattcaaaat 306  Q
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25791578 ---------ttatgttttgaaaattgtggaaatggaaacaaaatcaaaacctcaaatatagattactatcagatattgggttttacatgagattcaaaat 25791488  T
Q  307 tgaactttgatcattcacttt 327  Q
    |||||||||||||||||||||    
T  25791487 tgaactttgatcattcacttt 25791467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 22602707 - 22602777
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtc 144  Q
    ||||||||||||||||||||| |||| ||| |||||||| |||||||||||||| ||||||||||||||||    
T  22602707 acacgacaccgacacatataattacactgaattatgtgattttctcaaataatttacggtgtcggcgtgtc 22602777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 1433516 - 1433434
Alignment:
Q  75 acacgacaccgacacatataactacattgatt-atgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||||||||||||||| ||||   | | |||||| |||||||||| ||||||||||||||||||||  ||||||||||    
T  1433516 acacgacaccgacacatataattacaccaaatgatgtgattttctcaaattattaacggtgtcggcgtgtcaatgtccgtgtc 1433434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 19206108 - 19206030
Alignment:
Q  79 gacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||||||||||| || | ||| |||||||| |||||||||| |||| ||||||||||||||  |||||||||||    
T  19206108 gacaccgacacatataattataatgaattatgtgattttctcaaattattagcggtgtcggcgtgttggtgtccgtgtc 19206030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 155
Target Start/End: Original strand, 21828402 - 21828483
Alignment:
Q  75 acacgacaccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgt 155  Q
    |||| |||| |||||||| || |||| || ||||||||| |||||||||| | |||||||||||||||||| ||||||||||    
T  21828402 acacaacactgacacatacaattacaatggattatgtgattttctcaaattactaacggtgtcggcgtgtcagtgtccgtgt 21828483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 32308182 - 32308105
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtcc 151  Q
    ||||||||| |||||||| || |||| ||| |||||||| |||||||||| |||| ||||||||||||||| ||||||    
T  32308182 acacgacactgacacatacaattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtcc 32308105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 78 - 165
Target Start/End: Complemental strand, 9482993 - 9482905
Alignment:
Q  78 cgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtgcttca 165  Q
    |||||||||||||||||| |||| ||| || ||||| |||||||||| || | || |||||| ||||| |||||||| |||||||||||    
T  9482993 cgacaccgacacatataattacactgaattgtgtgattttctcaaattatcagcgatgtcggtgtgtcagtgtccgtatccgtgcttca 9482905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 26329379 - 26329461
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||| ||||||||||||| |||| ||| || ||||  |||||||||| ||||||| |||||||||||| ||||| |||||    
T  26329379 acacgacgccgacacatataattacactgaattgtgtgtttttctcaaattattaacgatgtcggcgtgtcagtgtctgtgtc 26329461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 27945103 - 27945021
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||||||||| | ||| |||| ||| |||||| | |||||||||| ||||  |||||||||||||| |||||||||||    
T  27945103 acacgacaccgacacttgtaattacactgaattatgtaattttctcaaattattagtggtgtcggcgtgtcagtgtccgtgtc 27945021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 144
Target Start/End: Original strand, 3520345 - 3520409
Alignment:
Q  81 caccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtc 144  Q
    ||||||||||||||| ||||||| ||||| ||| |||||||||| |||| ||||||| |||||||    
T  3520345 caccgacacatataattacattgaattatatgattttctcaaatgattatcggtgtcagcgtgtc 3520409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 150
Target Start/End: Original strand, 6630909 - 6630985
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtc 150  Q
    |||||||| |||||||||||| |||| ||| ||| |||| |||||||||| ||||  |||||||||||||| |||||    
T  6630909 acacgacatcgacacatataattacactgaattaagtgactttctcaaattattagtggtgtcggcgtgtcagtgtc 6630985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 11722125 - 11722177
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||| ||||||||||  ||| ||||||||||||||| |||||||||||    
T  11722125 attatgtgattttctcaaattgttagcggtgtcggcgtgtcagtgtccgtgtc 11722177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 149
Target Start/End: Complemental strand, 20549850 - 20549778
Alignment:
Q  78 cgacaccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgt 149  Q
    |||||||||||||||||| |||| || |||| |||| |||||||||| |||| ||||||||| ||||| ||||    
T  20549850 cgacaccgacacatataattacactgaattacgtgattttctcaaattattagcggtgtcggtgtgtcagtgt 20549778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 107 - 170
Target Start/End: Original strand, 20545266 - 20545329
Alignment:
Q  107 atgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtgcttcatatta 170  Q
    |||||| ||| |||||| |||| |||||| |||||||| || ||||| ||||||||||||||||    
T  20545266 atgtgattttttcaaattattagcggtgttggcgtgtccgtatccgtatccgtgcttcatatta 20545329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 26733363 - 26733284
Alignment:
Q  78 cgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    |||||||||||||| ||| || | ||| |||||||| ||| |||||| |||| |||||||| |||||| |||||||||||    
T  26733363 cgacaccgacacatttaattagactgaattatgtgattttgtcaaattattagcggtgtcgacgtgtcagtgtccgtgtc 26733284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 18215183 - 18215265
Alignment:
Q  75 acacgacaccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||||||||| | |||||||| || ||||||||| ||| |||||| |||| | | ||||||||||  |||||||||||    
T  18215183 acacgacaccgacacttgtaactacactgcattatgtgattttttcaaattattagctgcgtcggcgtgttagtgtccgtgtc 18215265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 21138993 - 21139072
Alignment:
Q  75 acacgacaccgacacatataactacattgattatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||||||||||||||| |||| | ||||  ||| |||||||||| ||||||||||| | | |||| ||||| |||||    
T  21138993 acacgacaccgacacatataattacagtaatta--tgattttctcaaattattaacggtgttgacatgtcagtgtctgtgtc 21139072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 168
Target Start/End: Complemental strand, 23191926 - 23191864
Alignment:
Q  106 tatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtgcttcatat 168  Q
    ||||||| |||||||||| |||| |||||||||||| || |||||||| |  |||||||||||    
T  23191926 tatgtgattttctcaaattattagcggtgtcggcgtatcagtgtccgtatatgtgcttcatat 23191864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 5548738 - 5548646
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtgcttcata 167  Q
    ||||||||| ||||||||||| |||| ||| |||| ||| |||||||||| || | |||||||||| | |  |||||||| |||||||||||||    
T  5548738 acacgacactgacacatataattacactgaattatttgattttctcaaattatcagcggtgtcggcattta-gtgtccgtatccgtgcttcata 5548646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 159
Target Start/End: Complemental strand, 11072316 - 11072275
Alignment:
Q  118 tcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgt 159  Q
    |||||| |||| |||||||||||||||||||| |||||||||    
T  11072316 tcaaattattatcggtgtcggcgtgtctgtgttcgtgtccgt 11072275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 156
Target Start/End: Complemental strand, 43250046 - 43249973
Alignment:
Q  84 cgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    |||||| ||||| |||| || ||||||| | |||||||||| |||| | ||||||||||||| |||||||||||    
T  43250046 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtc 43249973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 10042969 - 10042917
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||||||| |||||| ||||  |||||||||||||  |||||||||||    
T  10042969 attatgtgaatttatcaaattattagtggtgtcggcgtgtaagtgtccgtgtc 10042917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 46; Significance: 3e-17; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 158
Target Start/End: Original strand, 20371110 - 20371191
Alignment:
Q  78 cgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccg 158  Q
    ||||||||||||||||||  ||||||| |||||||| |||||||||| |||| |||||||||||||||  ||||||||||||    
T  20371110 cgacaccgacacatataatcacattgagttatgtgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtccg 20371191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 7265593 - 7265683
Alignment:
Q  78 cgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtgcttcata 167  Q
    |||||||||||||||||| |||| ||| |||||||| |||||||||| |||| |||||| |||||||| |||||||  | |||||||||||    
T  7265593 cgacaccgacacatataattacactgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgaatacgtgcttcata 7265683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 9027240 - 9027158
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||||||||||||||| ||||  || |||||||| | |||||||| |||| ||||||||||||||| |||||||||||    
T  9027240 acacgacaccgacacatataattacacggaattatgtgattatctcaaattattagcggtgtcggcgtgtcagtgtccgtgtc 9027158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 78 - 149
Target Start/End: Complemental strand, 7378038 - 7377966
Alignment:
Q  78 cgacaccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgt 149  Q
    |||||||||||||||||| ||||||| ||||||||| ||||||||||  ||| ||||||||| ||||||||||    
T  7378038 cgacaccgacacatataattacattgaattatgtgattttctcaaatttttagcggtgtcggggtgtctgtgt 7377966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 5732510 - 5732589
Alignment:
Q  78 cgacaccgacacatataactacattgat-tatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    |||||||||||||||||| |||| | |  ||||||| |||||||||| |||||||||||||||||||| |||||| ||||    
T  5732510 cgacaccgacacatataattacactaaaatatgtgattttctcaaattattaacggtgtcggcgtgtcagtgtccatgtc 5732589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 9629442 - 9629375
Alignment:
Q  78 cgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtc 144  Q
    |||||||||||||||||| |||||||| |||||||| |||||||||| |||  |||||||||||||||    
T  9629442 cgacaccgacacatataattacattgaattatgtgattttctcaaattattggcggtgtcggcgtgtc 9629375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 80 - 156
Target Start/End: Complemental strand, 9658936 - 9658859
Alignment:
Q  80 acaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||| |||||| |||| ||| |||||||| ||||| |||| |||| ||||||||||||||| |||||||||||    
T  9658936 acaccgacaaatataattacactgaattatgtgattttcttaaattattagcggtgtcggcgtgtcagtgtccgtgtc 9658859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 426514 - 426593
Alignment:
Q  78 cgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    |||||||||||| | ||| |||||| | |||||||| ||| |||||| |||||| ||||||||||||| |||||||||||    
T  426514 cgacaccgacacttgtaattacatttaattatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtc 426593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 144
Target Start/End: Complemental strand, 19040411 - 19040344
Alignment:
Q  78 cgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtc 144  Q
    |||||| ||||||||||| |||| ||| |||||||| |||||||||| |||| |||||||||||||||    
T  19040411 cgacacagacacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtc 19040344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 156
Target Start/End: Original strand, 30866149 - 30866223
Alignment:
Q  83 ccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||||||| ||||||| ||||||||| |||||||||| |||| |||||| || ||||| ||||| |||||    
T  30866149 ccgacacatataattacattgaattatgtgattttctcaaattattagcggtgttggtgtgtcggtgtcagtgtc 30866223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 77 - 133
Target Start/End: Complemental strand, 9617494 - 9617437
Alignment:
Q  77 acgacaccgacacatataactacattg-attatgtgaatttctcaaataattaacggt 133  Q
    ||||||||||||||||||| ||||||| ||||||||| |||||||||| |||| ||||    
T  9617494 acgacaccgacacatataattacattgaattatgtgattttctcaaattattaccggt 9617437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 17341691 - 17341743
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||| ||| |||||| |||||||||||||||||||| ||| |||||||    
T  17341691 attatgtgattttatcaaattattaacggtgtcggcgtgtcagtgcccgtgtc 17341743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 154
Target Start/End: Complemental strand, 26562751 - 26562671
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtg 154  Q
    |||||||| |||||||||||| |||| ||| |||||||| ||||||||||  ||| | ||||||||||||| |||| ||||    
T  26562751 acacgacatcgacacatataattacactgaattatgtgattttctcaaatttttagcagtgtcggcgtgtccgtgttcgtg 26562671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 159
Target Start/End: Original strand, 17841616 - 17841671
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgt 159  Q
    ||||||||| ||| |||||| |||| | ||||||||||||| ||||||||||||||    
T  17841616 attatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgt 17841671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 75 - 141
Target Start/End: Original strand, 32320666 - 32320733
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgt 141  Q
    |||||||||||| ||||||||  ||||||| |||||||| ||| |||||| |||||||||||| ||||    
T  32320666 acacgacaccgatacatataatgacattgaattatgtgattttatcaaattattaacggtgtcagcgt 32320733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 144
Target Start/End: Original strand, 33001289 - 33001356
Alignment:
Q  78 cgacaccgacacatataactaca-ttgattatgtgaatttctcaaataattaacggtgtcggcgtgtc 144  Q
    |||||||||||||||||| |||| || ||||||||| ||| |||||| |||| | |||||||||||||    
T  33001289 cgacaccgacacatataattacatttaattatgtgattttttcaaattattagcagtgtcggcgtgtc 33001356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 128
Target Start/End: Original strand, 9025491 - 9025545
Alignment:
Q  75 acacgacaccgacacatataactacattg-attatgtgaatttctcaaataatta 128  Q
    ||||||||||||||||||||| |||| || ||||||||| |||||||||| ||||    
T  9025491 acacgacaccgacacatataattacactgaattatgtgattttctcaaattatta 9025545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 10294169 - 10294087
Alignment:
Q  75 acacgacaccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||||||||||||||| ||||||| | |||| || | |||||||| |||| |||| ||||| |||| || ||||||||    
T  10294169 acacgacaccgacacatataattacattgaaatatgcgattatctcaaattattagcggtatcggcatgtcagtatccgtgtc 10294087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 13851794 - 13851716
Alignment:
Q  79 gacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    |||| |||||||||||| |||| ||| ||| || | |||||||||| |||| |||||||| |||||| |||||||||||    
T  13851794 gacatcgacacatataattacactgaattacgttattttctcaaattattagcggtgtcgacgtgtcagtgtccgtgtc 13851716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 16488587 - 16488657
Alignment:
Q  75 acacgacaccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtc 144  Q
    ||||||||||||||||||||| |||| || ||| ||||| ||||| ||| ||||| | |||||||||||||    
T  16488587 acacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtc 16488657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 16766759 - 16766677
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||||||||| | ||| |||| ||| |||||||| ||| |||||| |||| | ||||||||||||| |||||| ||||    
T  16766759 acacgacaccgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccatgtc 16766677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 18367898 - 18367828
Alignment:
Q  75 acacgacaccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtc 144  Q
    ||||||||||||||||||||| |||| || ||| ||||| ||||| ||| ||||| | |||||||||||||    
T  18367898 acacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtc 18367828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 105 - 167
Target Start/End: Original strand, 19147431 - 19147493
Alignment:
Q  105 ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtgcttcata 167  Q
    |||||||| |||||||||| |||| | ||||| | ||||| |||||||| |||||||||||||    
T  19147431 ttatgtgattttctcaaattattagctgtgtccgtgtgtcagtgtccgtatccgtgcttcata 19147493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 34073344 - 34073426
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||||||| ||||||| |||| ||| ||||| || |||||||||| |||| || ||| ||| |||| |||||||||||    
T  34073344 acacgacaccgacccatataattacactgaattatgagattttctcaaattattagcgatgttggcatgtcagtgtccgtgtc 34073426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 155
Target Start/End: Complemental strand, 677899 - 677818
Alignment:
Q  75 acacgacaccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgt 155  Q
    |||||||||| || ||||||| |||| |  ||||| ||| |||||||||| |||||| ||||||||||||| ||||| ||||    
T  677899 acacgacaccaacgcatataaatacactatattatatgattttctcaaattattaacagtgtcggcgtgtcagtgtctgtgt 677818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 128
Target Start/End: Complemental strand, 32299332 - 32299283
Alignment:
Q  80 acaccgacacatataactacattg-attatgtgaatttctcaaataatta 128  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||| ||||    
T  32299332 acaccgacacgtataactacattgaattatgtgattttctcaaattatta 32299283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 10842564 - 10842508
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtg 160  Q
    ||||||||| ||| |||||| |||| ||||||||||||||| |||||  ||||||||    
T  10842564 attatgtgattttttcaaattattagcggtgtcggcgtgtccgtgtcaatgtccgtg 10842508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 122
Target Start/End: Complemental strand, 13815504 - 13815456
Alignment:
Q  75 acacgacaccgacacatataactacattg-attatgtgaatttctcaaa 122  Q
    |||||||||||| |||||||||| ||||| ||||||||| |||||||||    
T  13815504 acacgacaccgagacatataacttcattgaattatgtgattttctcaaa 13815456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 1e-16; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 81 - 168
Target Start/End: Original strand, 31236580 - 31236668
Alignment:
Q  81 caccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtgcttcatat 168  Q
    ||||||||||||||| |||||||| |||||||| |||||||||| |||| | ||||||||||||| || ||| ||||| ||||||||||    
T  31236580 caccgacacatataattacattgaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtatccttgtccatgcttcatat 31236668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 34897144 - 34897054
Alignment:
Q  78 cgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtgcttcata 167  Q
    ||||| |||||||||||| |||| ||| |||||||| |||||||||| |||| |||||||| ||||||||||||||| |  ||||||||||    
T  34897144 cgacatcgacacatataattacactgaattatgtgattttctcaaattattagcggtgtcgacgtgtctgtgtccgtttatgtgcttcata 34897054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 4786338 - 4786411
Alignment:
Q  78 cgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtc 150  Q
    |||||||||||||||||| |||| ||| |||||||| ||||| |||| ||||| |||||||||||||| |||||    
T  4786338 cgacaccgacacatataattacactgaattatgtgattttcttaaattattaatggtgtcggcgtgtcagtgtc 4786411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 11944727 - 11944658
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgt 143  Q
    ||||||||||||||||||||| |||| ||| |||||||| ||| |||||| |||||| ||||||||||||    
T  11944727 acacgacaccgacacatataattacactgagttatgtgattttatcaaattattaacagtgtcggcgtgt 11944658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 75 - 141
Target Start/End: Original strand, 11927083 - 11927150
Alignment:
Q  75 acacgacaccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgt 141  Q
    ||||||||||||||||||||| |||| || ||||||||| ||| |||||| |||||| ||||||||||    
T  11927083 acacgacaccgacacatataattacactgaattatgtgattttatcaaattattaacagtgtcggcgt 11927150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 114 - 157
Target Start/End: Original strand, 31109555 - 31109598
Alignment:
Q  114 tttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtcc 157  Q
    |||||||||| |||||||||||||||||||| ||||||||||||    
T  31109555 tttctcaaattattaacggtgtcggcgtgtcagtgtccgtgtcc 31109598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 22652038 - 22651956
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||||||||| | ||| || ||||| |||||||| ||| |||||| |||| | ||||||||||||| |||||||||||    
T  22652038 acacgacaccgacacttgtaattatattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 22651956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 24362199 - 24362281
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||  ||||||||||| |||| ||| |||||||| | |||||||| |||| ||||||||||||||| ||||| |||||    
T  24362199 acacgacattgacacatataattacactgaattatgtgattctctcaaattattagcggtgtcggcgtgtcggtgtctgtgtc 24362281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 156
Target Start/End: Complemental strand, 27213601 - 27213527
Alignment:
Q  83 ccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||||||| |||| ||| |||||||| ||||| |||| |||| | |||||||||||||||| ||||||||    
T  27213601 ccgacacatataattacagtgaattatgtgattttctgaaattattagcagtgtcggcgtgtctgtatccgtgtc 27213527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 78 - 150
Target Start/End: Original strand, 13844596 - 13844669
Alignment:
Q  78 cgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtc 150  Q
    |||||||||||||||||| |||| | | |||||||| |||||||||| |||| | ||||||||||||| |||||    
T  13844596 cgacaccgacacatataattacactcaattatgtgattttctcaaattattagcagtgtcggcgtgtccgtgtc 13844669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 76 - 150
Target Start/End: Original strand, 39954277 - 39954352
Alignment:
Q  76 cacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtc 150  Q
    |||| ||||| ||||||||| |||| | | |||||||| |||||||||| |||| ||||||||||||||| |||||    
T  39954277 cacggcaccgtcacatataattacactaaattatgtgattttctcaaattattagcggtgtcggcgtgtcggtgtc 39954352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 163
Target Start/End: Original strand, 15816126 - 15816215
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtgctt 163  Q
    ||||||||||||||| ||||| |||| | | |||||||| ||| |||||| ||||   ||||||||||||| |||||||| ||| |||||    
T  15816126 acacgacaccgacacttataattacactaaattatgtgattttttcaaattattagttgtgtcggcgtgtcagtgtccgtatccatgctt 15816215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 30271318 - 30271382
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtcc-gtgtccgtgcttcata 167  Q
    ||||||||| ||| |||||| |||| | ||||||||||||| |||||| ||||| ||||||||||    
T  30271318 attatgtgattttttcaaatgattagctgtgtcggcgtgtcagtgtccggtgtctgtgcttcata 30271382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 6427412 - 6427314
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtg-----tccgtgcttcata 167  Q
    |||||||||| |||||||||| |||||||| |||||||| |||||||||| |||| |||||| |||||||| |||||||||     |||||||||||||    
T  6427412 acacgacaccaacacatataattacattgaattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtccgtgccgtgtccgtgcttcata 6427314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 79 - 155
Target Start/End: Original strand, 2896122 - 2896199
Alignment:
Q  79 gacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgt 155  Q
    |||||||||| ||||| ||||| ||| |||||||| |||||||||| |||| ||||||||||||||| ||||||||||    
T  2896122 gacaccgacatatatagctacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtccgtgt 2896199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 79 - 158
Target Start/End: Original strand, 6415002 - 6415082
Alignment:
Q  79 gacaccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccg 158  Q
    ||||||||||||| ||| || | || ||||||||| ||||||||||||||| || |||||||||||| |||||||||||||    
T  6415002 gacaccgacacatctaattaaactgtattatgtgattttctcaaataattagcgatgtcggcgtgtcagtgtccgtgtccg 6415082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 80 - 150
Target Start/End: Complemental strand, 13997940 - 13997869
Alignment:
Q  80 acaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtc 150  Q
    |||||||||||||||| |||| ||| |||||||| ||| | ||||||||||||||||||||||||| |||||    
T  13997940 acaccgacacatataattacactgaattatgtgatttttttaaataattaacggtgtcggcgtgtcagtgtc 13997869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 79 - 160
Target Start/End: Complemental strand, 36878519 - 36878437
Alignment:
Q  79 gacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtg 160  Q
    ||||||||||| ||||| |||| ||| |||||||| |||||||||| |||| ||||||||||||||| |||||  ||||||||    
T  36878519 gacaccgacacctataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtcagtgtctatgtccgtg 36878437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 9709879 - 9709800
Alignment:
Q  78 cgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    |||||||||||||||||| ||||  || |||||||| |||||||||| |||| |||||| ||| |||| |||||||||||    
T  9709879 cgacaccgacacatataattacaacgaattatgtgattttctcaaattattagcggtgtaggcatgtcagtgtccgtgtc 9709800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 21530721 - 21530675
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtc 150  Q
    ||||| ||| |||||||||| ||||||||||||||||||||||||||    
T  21530721 attatatgattttctcaaattattaacggtgtcggcgtgtctgtgtc 21530675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 1815315 - 1815226
Alignment:
Q  79 gacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtgcttcata 167  Q
    ||||||||||| | ||| |||| ||| |||||||| ||| | |||||||||   ||||||||||||| |||||||| |||||||||||||    
T  1815315 gacaccgacacttgtaattacactgaattatgtgattttttaaaataattatttgtgtcggcgtgtcagtgtccgtatccgtgcttcata 1815226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 398792 - 398844
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||| ||| |||||| |||| ||||||||||||||| |||||||||||    
T  398792 attatgtgattttttcaaattattagcggtgtcggcgtgtcagtgtccgtgtc 398844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 29163381 - 29163453
Alignment:
Q  78 cgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgt 149  Q
    |||||||||||||||||| || ||||| |||||||| ||||  ||||  ||| ||||||||||||||||||||    
T  29163381 cgacaccgacacatataattaaattgaattatgtgattttcctaaatttttagcggtgtcggcgtgtctgtgt 29163453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 32724105 - 32724177
Alignment:
Q  85 gacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||||| |||||| | |||||| |||||||||||| ||||||| ||||||||| || |||| ||||||    
T  32724105 gacacatataattacattaaattatgtaaatttctcaaattattaacgatgtcggcgtatcagtgttcgtgtc 32724177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 80 - 138
Target Start/End: Original strand, 1864882 - 1864941
Alignment:
Q  80 acaccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcgg 138  Q
    |||||||||||||||| |||| || ||||||||| |||||||||| |||||| |||||||    
T  1864882 acaccgacacatataattacactgaattatgtgattttctcaaattattaactgtgtcgg 1864941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 52903308 - 52903229
Alignment:
Q  78 cgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    |||||||||||||||||| |||| ||| |||| ||| ||| | |||| ||||||||| |||||||||  |||||||||||    
T  52903308 cgacaccgacacatataattacactgaattatatgattttattaaattattaacggtatcggcgtgttagtgtccgtgtc 52903229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 1486706 - 1486788
Alignment:
Q  75 acacgacaccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||||||||| ||||| |||| || ||||||||| ||| |||||| |||| | ||||| ||||||| || ||||||||    
T  1486706 acacgacaccgacacttataattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtatccgtgtc 1486788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 5376497 - 5376579
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||||||||| | ||| |||| ||| |||||| | ||||| |||| |||| ||||||||||||||  |||||||||||    
T  5376497 acacgacaccgacacttttaattacactgaattatgttattttcttaaattattagcggtgtcggcgtgttagtgtccgtgtc 5376579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 9828106 - 9828036
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtc 144  Q
    |||||||||||||||||| || |||| ||| |||||||| ||| |||||| ||||  ||||||||||||||    
T  9828106 acacgacaccgacacataaaattacactgaattatgtgattttatcaaattattagtggtgtcggcgtgtc 9828036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 156
Target Start/End: Original strand, 10577740 - 10577814
Alignment:
Q  83 ccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||||||| |||| || ||| ||||| ||||| ||| ||||| | ||||||||||||| |||||||||||    
T  10577740 ccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtcggtgtccgtgtc 10577814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 20157347 - 20157429
Alignment:
Q  75 acacgacaccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||||||||||||| | |||| || ||||||||| ||||||| || |||| ||||||||  ||||| ||| |||||||    
T  20157347 acacgacaccgacacatatgattacactgaattatgtgattttctcacattattagcggtgtcgatgtgtcagtgcccgtgtc 20157429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 38503378 - 38503300
Alignment:
Q  79 gacaccgacacatataactacattgat-tatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||||||||||| |||| |||  ||| ||| |||||||||| |||| ||||||||| ||||  |||||||||||    
T  38503378 gacaccgacacatataattacactgaaatatatgattttctcaaattattagcggtgtcggtgtgttagtgtccgtgtc 38503300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 39953146 - 39953236
Alignment:
Q  78 cgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtgcttcata 167  Q
    ||||||||||||||| || |||| | | |||||||| ||||| |||| |||| |||||||||||| || |||||| | ||||| |||||||    
T  39953146 cgacaccgacacatacaattacactaaattatgtgattttctaaaattattagcggtgtcggcgtttccgtgtccatatccgttcttcata 39953236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 1704989 - 1705082
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtgcttcata 167  Q
    ||||||||||||||| | ||| |||  ||| |||||||| ||| |||||| ||||   ||||||| ||||| |||||||| |||||||||||||    
T  1704989 acacgacaccgacacttgtaattaccctgaattatgtgattttttcaaattattagatgtgtcggtgtgtcggtgtccgtatccgtgcttcata 1705082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 9103672 - 9103619
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtcc 157  Q
    ||||||||| ||| |||||| |||||| ||||||||||||| ||||||| ||||    
T  9103672 attatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgagtcc 9103619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 123
Target Start/End: Complemental strand, 44482292 - 44482243
Alignment:
Q  75 acacgacaccgacacatataactacattg-attatgtgaatttctcaaat 123  Q
    ||||||||||||||||||||| |||| || ||||||||| ||||||||||    
T  44482292 acacgacaccgacacatataattacactgaattatgtgattttctcaaat 44482243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 1262916 - 1262864
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||| |||||||||| |||| | ||||||||||||| |||| ||||||    
T  1262916 attatgtgattttctcaaattattagctgtgtcggcgtgtccgtgttcgtgtc 1262864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 156
Target Start/End: Complemental strand, 23718082 - 23718006
Alignment:
Q  81 caccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||||||||| |||| ||| |||||||| |||||||||| |||| ||||||||| ||||| |||||||||||    
T  23718082 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtc 23718006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 156
Target Start/End: Complemental strand, 24105754 - 24105678
Alignment:
Q  81 caccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||||||||| |||| ||| |||||||| |||||||||| |||| ||||||||| ||||| |||||||||||    
T  24105754 caccgacacatataattacactgaattatgtgactttctcaaattattagcggtgtcggtgtgtcagtgtccgtgtc 24105678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 86 - 156
Target Start/End: Complemental strand, 21616813 - 21616742
Alignment:
Q  86 acacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    |||||||||| |||| ||| |||||||| |||||||||| |||| ||||||||||||||| |||||||||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattattagcggtgtcggcgtgtccgtgtccgtgtc 21616742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 159
Target Start/End: Complemental strand, 37559036 - 37558954
Alignment:
Q  78 cgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgt 159  Q
    |||||||||||| | ||| |||||||| |||||||| |||  ||||| |||| | ||||||||||||| ||||||||||||||    
T  37559036 cgacaccgacacttgtaattacattgaattatgtgatttttacaaattattagctgtgtcggcgtgtcagtgtccgtgtccgt 37558954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 30404877 - 30404929
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||| ||| |||||| |||||| ||||||||||||| |||||||||||    
T  30404877 attatgtgattttttcaaattattaaccgtgtcggcgtgtcagtgtccgtgtc 30404929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 158
Target Start/End: Original strand, 42832277 - 42832357
Alignment:
Q  79 gacaccgacacatataactacattgat-tatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccg 158  Q
    ||||||||||| ||||| |||| |||  ||||| | |||||||||| |||| ||||||||| ||||||| |||||||||||    
T  42832277 gacaccgacacttataattacactgaaatatgtaattttctcaaattattagcggtgtcggtgtgtctgagtccgtgtccg 42832357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 156
Target Start/End: Original strand, 20242727 - 20242806
Alignment:
Q  78 cgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    |||||||||||||||||| |||| ||| |||||||| ||||| ||| |||||   ||||||||||||| |||||| ||||    
T  20242727 cgacaccgacacatataattacactgaattatgtgattttctaaaaaaattagttgtgtcggcgtgtcagtgtccatgtc 20242806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 167
Target Start/End: Complemental strand, 27084294 - 27084231
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtgcttcata 167  Q
    ||||| ||| |||||||||| |||| | ||||||| ||||| |||||||| |||||||||||||    
T  27084294 attatatgattttctcaaattattagcagtgtcggagtgtccgtgtccgtatccgtgcttcata 27084231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 30527592 - 30527678
Alignment:
Q  75 acacgacaccgacacatataactaca-ttgattatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtg 160  Q
    |||||| |||||||||||||| |||| |  ||||| ||| |||||||||| |||||| |||| || ||||| ||||| |||||||||    
T  30527592 acacgataccgacacatataattacactaaattatatgattttctcaaattattaacagtgtgggtgtgtcagtgtcagtgtccgtg 30527678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 34784979 - 34785061
Alignment:
Q  75 acacgacaccgacacatataactaca-ttgattatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||||||||||||||| |||| |  ||||||||| ||||| ||| |||||   ||||||| ||||| |||||||||||    
T  34784979 acacgacaccgacacatataattacactaaattatgtgattttctaaaaaaattagttgtgtcggtgtgtcagtgtccgtgtc 34785061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 136
Target Start/End: Complemental strand, 44860382 - 44860320
Alignment:
Q  75 acacgacaccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtc 136  Q
    ||||||||||||||||||||| |||| || |||||| || |||||||||| |||| |||||||    
T  44860382 acacgacaccgacacatataattacactgaattatgcgattttctcaaattattagcggtgtc 44860320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 118 - 167
Target Start/End: Original strand, 34994017 - 34994066
Alignment:
Q  118 tcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtgcttcata 167  Q
    |||||| |||| |||||| ||||| || ||||||||||||||||||||||    
T  34994017 tcaaattattagcggtgttggcgtatcagtgtccgtgtccgtgcttcata 34994066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 80 - 144
Target Start/End: Complemental strand, 39279732 - 39279667
Alignment:
Q  80 acaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtc 144  Q
    |||||||||||||||| |||| ||| |||| ||| ||||||| || ||||||||||| ||||||||    
T  39279732 acaccgacacatataattacactgaattatttgattttctcatattattaacggtgttggcgtgtc 39279667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 16069297 - 16069333
Alignment:
Q  120 aaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    |||| |||||||||||||||||||| |||||||||||    
T  16069297 aaattattaacggtgtcggcgtgtcagtgtccgtgtc 16069333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 104 - 167
Target Start/End: Complemental strand, 92839 - 92776
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtgcttcata 167  Q
    ||||||| | |||||||||| |||| ||||||||||||||| |||||||| |||||||||||||    
T  92839 attatgtaattttctcaaattattagcggtgtcggcgtgtcagtgtccgtatccgtgcttcata 92776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 75 - 160
Target Start/End: Complemental strand, 3966565 - 3966478
Alignment:
Q  75 acacgacaccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtcc-gtgtccgtg 160  Q
    ||||||||||||||||||||| |||| || ||| ||||| |||||||||| |||| |||||||||| |||| |||||| |||||||||    
T  3966565 acacgacaccgacacatataattacactgaattgtgtgattttctcaaattattagcggtgtcggcatgtcagtgtccagtgtccgtg 3966478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 73 - 155
Target Start/End: Complemental strand, 16734932 - 16734847
Alignment:
Q  73 ttacacgacaccgacacatataactaca---ttgattatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgt 155  Q
    ||||||||||||||||||||||| ||||   |||||||| | | ||||| |||| |||||||||||||||||||  ||||||||||    
T  16734932 ttacacgacaccgacacatataattacacacttgattatataattttcttaaattattaacggtgtcggcgtgttagtgtccgtgt 16734847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 82 - 167
Target Start/End: Complemental strand, 30098381 - 30098294
Alignment:
Q  82 accgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccg-tgtccgtgcttcata 167  Q
    |||||||  ||||| |||||||| |||||||| |||||||||| ||||||||| ||| |||||| ||||||| |||||||||||||||    
T  30098381 accgacatctataattacattgaattatgtgattttctcaaattattaacggtttcgtcgtgtcagtgtccggtgtccgtgcttcata 30098294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 144
Target Start/End: Original strand, 28588674 - 28588741
Alignment:
Q  78 cgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtc 144  Q
    |||||||||||| ||||| |||| ||| |||||||| |||||||||| |||| |||||||||||||||    
T  28588674 cgacaccgacacctataattacactgaattatgtgattttctcaaattattaccggtgtcggcgtgtc 28588741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 39205942 - 39205849
Alignment:
Q  75 acacgacaccgacacatataactacat-tgattatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtgcttcata 167  Q
    |||||||||| |||||||||| ||||  | ||||| ||| |||||||||| |||| | |||||| |||||| ||||| || |||||||||||||    
T  39205942 acacgacaccaacacatataattacacctaattatatgattttctcaaattattagcagtgtcgacgtgtccgtgtctgtatccgtgcttcata 39205849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 39698603 - 39698510
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtgcttcata 167  Q
    ||||||||| ||||| | ||| |||| ||| |||||||| ||| |||||| |||| | ||||| ||||||| |||||||| |||||||||||||    
T  39698603 acacgacactgacacttgtaattacactgaattatgtgattttttcaaattattagctgtgtcagcgtgtcagtgtccgtatccgtgcttcata 39698510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 7175046 - 7175098
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||| |||||||||| |||||||||||||  ||||| |||||||||||    
T  7175046 attatgtgattttctcaaattattaacggtgtcgatgtgtcagtgtccgtgtc 7175098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 77 - 160
Target Start/End: Complemental strand, 11685999 - 11685916
Alignment:
Q  77 acgacaccgacacatataactaca-ttgattatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtg 160  Q
    ||||||||||||||||||| |||| |  |||||| || |||||||||| |||| |||||||||| |||| |||| ||||||||||    
T  11685999 acgacaccgacacatataattacactaaattatgcgactttctcaaattattagcggtgtcggcatgtcagtgt-cgtgtccgtg 11685916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 19552570 - 19552622
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||| ||| |||||| |||||| ||||||||||||| |||||||||||    
T  19552570 attatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccgtgtc 19552622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 6401560 - 6401478
Alignment:
Q  75 acacgacaccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||||||||||||||| |||| || ||| ||||| ||||| ||| | |||   ||||||||||||| |||||||||||    
T  6401560 acacgacaccgacacatataattacactgtattttgtgattttctaaaaaatttagttgtgtcggcgtgtcggtgtccgtgtc 6401478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 77 - 166
Target Start/End: Complemental strand, 10298629 - 10298539
Alignment:
Q  77 acgacaccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtgcttcat 166  Q
    ||||||||||||| | ||| ||||||| ||||||||| ||| |||||| ||||   ||||||||||||  |||||||  ||||||||||||    
T  10298629 acgacaccgacacttgtaattacattgtattatgtgactttttcaaattattagttgtgtcggcgtgttagtgtccgcatccgtgcttcat 10298539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 101 - 151
Target Start/End: Complemental strand, 17123083 - 17123033
Alignment:
Q  101 ttgattatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtcc 151  Q
    |||||||||||| |||||||||| |||| |||||| |||||||| ||||||    
T  17123083 ttgattatgtgattttctcaaattattagcggtgttggcgtgtcagtgtcc 17123033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 21814323 - 21814253
Alignment:
Q  75 acacgacaccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtc 144  Q
    ||||||||||||||||||||| |||| || ||| ||||| ||||| ||| ||||| | |||||||||||||    
T  21814323 acacgacaccgacacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtc 21814253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 27144495 - 27144442
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtcc 157  Q
    ||||||||| || ||||||| |||| ||||||||||||||| ||||| ||||||    
T  27144495 attatgtgatttcctcaaattattagcggtgtcggcgtgtcagtgtctgtgtcc 27144442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 79 - 167
Target Start/End: Complemental strand, 42893418 - 42893329
Alignment:
Q  79 gacaccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtgcttcata 167  Q
    ||||||||||| | ||| |||| || ||||||||| ||| |||||| |||| | ||||||| ||||| |||||| | |||||||||||||    
T  42893418 gacaccgacacttgtaattacactggattatgtgattttttcaaattattagctgtgtcggtgtgtccgtgtccatatccgtgcttcata 42893329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 150
Target Start/End: Complemental strand, 2436984 - 2436908
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtc 150  Q
    |||||||||||||||||||||  |||  || |||||||| |||  ||||| |||| ||||||||||||||| |||||    
T  2436984 acacgacaccgacacatataatcacaacgaattatgtgatttttgcaaattattagcggtgtcggcgtgtcagtgtc 2436908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 150
Target Start/End: Complemental strand, 6035544 - 6035469
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtc 150  Q
    |||||||||||||| |||||| |||| ||| |||| | | |||||||||| |||| ||||||||||||||| |||||    
T  6035544 acacgacaccgacaaatataattacactgaattatatta-tttctcaaattattagcggtgtcggcgtgtcagtgtc 6035469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 9449501 - 9449449
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||| |||||||||| ||||  |||||||||||| | |||||||||||    
T  9449501 attatgtgattttctcaaattattattggtgtcggcgtgccagtgtccgtgtc 9449449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 14674301 - 14674249
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||| ||| |||||| |||| | ||||||||||||| |||||||||||    
T  14674301 attatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtc 14674249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 75 - 150
Target Start/End: Complemental strand, 31084385 - 31084309
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtc 150  Q
    |||||||| |||||| | ||| |||||||| |||||||| ||| |||||| |||| | ||||||||||||| |||||    
T  31084385 acacgacatcgacacttgtaattacattgaattatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtc 31084309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 9744 - 9835
Alignment:
Q  75 acacgacaccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtgcttcata 167  Q
    ||||||||||||||||||||| |||| || |||| |||| |||||||||| ||||  || |||||| |||||||||  ||||||||||||||||    
T  9744 acacgacaccgacacatataattacactgaattaagtgattttctcaaattattagtggcgtcggcatgtctgtgt--gtgtccgtgcttcata 9835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 22234887 - 22234981
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttct-caaataattaacggtgtcggcgtgtctgtgtccgtgtccgtgcttcata 167  Q
    |||||||||||||||||| || |||| ||| |||||||| ||| | |||||  ||| ||||||||||||||| |||||||| |||||||||||||    
T  22234887 acacgacaccgacacatagaattacactgaattatgtgatttttttcaaatttttagcggtgtcggcgtgtccgtgtccgtatccgtgcttcata 22234981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 156
Target Start/End: Complemental strand, 13783342 - 13783261
Alignment:
Q  76 cacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    |||||||||| ||||||||| |||| ||| || |||||  |||||||||||||| ||||||||| ||||| |||||||||||    
T  13783342 cacgacaccggcacatataattacactgaattttgtgatcttctcaaataattagcggtgtcggtgtgtcagtgtccgtgtc 13783261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 77 - 150
Target Start/End: Original strand, 35723383 - 35723458
Alignment:
Q  77 acgacaccgacacatataactacattga-ttatgtgaattt-ctcaaataattaacggtgtcggcgtgtctgtgtc 150  Q
    ||||||| ||||||||||| |||||||| ||||||| |||| ||||||| |||| ||||||||||||||| |||||    
T  35723383 acgacactgacacatataattacattgaattatgtgtattttctcaaattattagcggtgtcggcgtgtcagtgtc 35723458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 5414169 - 5414251
Alignment:
Q  75 acacgacaccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    |||||||||||| |||||||| |||| || ||| ||||| ||||| ||| ||||| | ||||||||||||| |||||||||||    
T  5414169 acacgacaccgatacatataattacactgcattttgtgattttctaaaaaaattagctgtgtcggcgtgtccgtgtccgtgtc 5414251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 40742653 - 40742571
Alignment:
Q  75 acacgacaccgacacatataactacatt-gattatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    |||||||| |||||||||||| |||| | |||||| ||| |||||||||| ||||| ||||||||||| ||  ||||||||||    
T  40742653 acacgacatcgacacatataattacactagattatatgattttctcaaattattaatggtgtcggcgtttcaatgtccgtgtc 40742571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 160
Target Start/End: Complemental strand, 46160958 - 46160873
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtg 160  Q
    |||||||||||||||||||||  ||| ||| |||||| | ||||||| ||  ||||||| |||||||||||||||| ||||||||||    
T  46160958 acacgacaccgacacatataataacactgaattatgttattttctcatatttttaacggcgtcggcgtgtctgtgt-cgtgtccgtg 46160873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 104 - 157
Target Start/End: Complemental strand, 7012098 - 7012045
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtcc 157  Q
    ||||||| | |||||||||| |||| ||||||||||||||| ||||||||||||    
T  7012098 attatgtcattttctcaaattattatcggtgtcggcgtgtcggtgtccgtgtcc 7012045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 30982875 - 30982954
Alignment:
Q  75 acacgacaccgacacatataactacattgat-tatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||||||||| ||||| |||| |||  ||||||| |||||||||| |||| |||||   |||||||||||||||||||    
T  30982875 acacgacaccgacacttataattacactgaaatatgtgattttctcaaatcattagcggtg---gcgtgtctgtgtccgtgtc 30982954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 79 - 137
Target Start/End: Original strand, 5775359 - 5775418
Alignment:
Q  79 gacaccgacacatataactaca-ttgattatgtgaatttctcaaataattaacggtgtcg 137  Q
    ||||||||||||||||| |||| || ||||||||| |||||||||| ||||| |||||||    
T  5775359 gacaccgacacatataattacacttaattatgtgattttctcaaattattaatggtgtcg 5775418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 83 - 144
Target Start/End: Complemental strand, 40613504 - 40613442
Alignment:
Q  83 ccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtc 144  Q
    ||||||||||||| |||| ||| |||||||| |||||||||  |||| |||||||||||||||    
T  40613504 ccgacacatataattacactgaattatgtgattttctcaaaatattagcggtgtcggcgtgtc 40613442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 46083988 - 46084080
Alignment:
Q  75 acacgacaccgacacatataactaca-ttgattatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtgcttcata 167  Q
    ||||||||||||||||||||| |||| | |||||||||| || || ||| ||||| | ||||| | ||||| |||||||| ||| |||||||||    
T  46083988 acacgacaccgacacatataattacactagattatgtgatttactaaaacaattagctgtgtccg-gtgtccgtgtccgtatccatgcttcata 46084080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 20521876 - 20521928
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||| ||| |||||| |||| |||| |||||||||| |||||||||||    
T  20521876 attatgtgattttatcaaattattatcggtatcggcgtgtcagtgtccgtgtc 20521928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 143
Target Start/End: Complemental strand, 28912 - 28843
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgt 143  Q
    |||| |||||||||||||||| |||||||| ||||| || ||||| |||| |||||||||||||||||||    
T  28912 acacaacaccgacacatataattacattgaattatgcgattttcttaaattattaacggtgtcggcgtgt 28843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 36; Significance: 0.00000000003; HSPs: 21)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 104 - 167
Target Start/End: Complemental strand, 5339140 - 5339077
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtgcttcata 167  Q
    ||||||||| |||||||||| ||||||  ||||||||||||||| ||||| | |||||||||||    
T  5339140 attatgtgattttctcaaattattaacaatgtcggcgtgtctgtatccgtattcgtgcttcata 5339077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 8383316 - 8383237
Alignment:
Q  78 cgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    |||||||||||| ||||| |||| ||| |||| ||| |||||||||| |||| |||||||||||||||  ||||||||||    
T  8383316 cgacaccgacacttataattacactgaattatatgattttctcaaattattagcggtgtcggcgtgtcaatgtccgtgtc 8383237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 78 - 156
Target Start/End: Complemental strand, 25093561 - 25093482
Alignment:
Q  78 cgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    |||||||||||||||||| |||| ||| || ||||| |||||||||| |||||| ||||||||||||  ||||| |||||    
T  25093561 cgacaccgacacatataattacactgaattgtgtgattttctcaaatcattaacagtgtcggcgtgttagtgtcagtgtc 25093482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 115 - 160
Target Start/End: Complemental strand, 21720785 - 21720740
Alignment:
Q  115 ttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtg 160  Q
    ||||||||| |||| ||||||||||||||| |||||||||||||||    
T  21720785 ttctcaaattattatcggtgtcggcgtgtcagtgtccgtgtccgtg 21720740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 167
Target Start/End: Original strand, 25948884 - 25948977
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtgcttcata 167  Q
    |||||||||| |||| ||||| |||| ||| |||||||| ||| |||||| |||| | || ||||| |||| ||||||||||| ||||||||||    
T  25948884 acacgacaccaacacttataattacactgaattatgtgattttttcaaattattagccgtatcggcatgtcagtgtccgtgtctgtgcttcata 25948977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 25 - 156
Target Start/End: Original strand, 4990914 - 4991046
Alignment:
Q  25 atgaagtacggacactccccggattagacgtgtcgcaatgtctgatatttacacgacaccgacacatataactacattg-attatgtgaatttctcaaat 123  Q
    |||||| ||||||||||| |||||||| ||||||    |||||||||   ||||||| ||||||| | ||| |||| || ||||||| | |||||||||     
T  4990914 atgaagcacggacactcctcggattaggcgtgtccacgtgtctgataccaacacgacgccgacacttgtaattacactgaattatgtaattttctcaaac 4991013  T
Q  124 aattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
     |||| ||||||||| ||||| || ||||||||    
T  4991014 tattagcggtgtcggagtgtcagtctccgtgtc 4991046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 78 - 167
Target Start/End: Original strand, 13845525 - 13845613
Alignment:
Q  78 cgacaccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtgcttcata 167  Q
    |||||||||||||||||| |||| || ||| ||||| ||||| ||| | ||||| |||||||  |||| |||||||| |||||||||||||    
T  13845525 cgacaccgacacatataattacactgcattttgtgattttctaaaaaatttaactgtgtcgg--tgtccgtgtccgtatccgtgcttcata 13845613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 23870586 - 23870649
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtgcttcata 167  Q
    ||||| ||| ||| |||||| |||| |||||||| |||||| |||||||| |||||||||||||    
T  23870586 attatatgattttttcaaattattagcggtgtcgacgtgtccgtgtccgtatccgtgcttcata 23870649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 8039832 - 8039902
Alignment:
Q  75 acacgacaccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtc 144  Q
    ||||||||||||||||||||| |||| || ||||| | | |||||||||| |||| |||||| ||||||||    
T  8039832 acacgacaccgacacatataattacactgaattatataattttctcaaattattagcggtgttggcgtgtc 8039902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 160
Target Start/End: Original strand, 10318035 - 10318117
Alignment:
Q  78 cgacaccgacacatataactacattgattatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtg 160  Q
    |||||||||||| ||||  |||| | |  |||||| ||| |||||| |||| | ||||||||||||| |||||||||||||||    
T  10318035 cgacaccgacacttatatttacactaaaaatgtgactttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgtg 10318117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 16192747 - 16192817
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtc 144  Q
    |||||||| | |||||||||| |||| ||| |||||| | |||||||||| |||||||||||||| |||||    
T  16192747 acacgacatcaacacatataattacactgaattatgttattttctcaaattattaacggtgtcggtgtgtc 16192817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 78 - 167
Target Start/End: Complemental strand, 18427008 - 18426918
Alignment:
Q  78 cgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtgcttcata 167  Q
    ||||||||||| |||||| ||||  || |||||||| ||| | |||| ||||  |||||||||||||| |||||||| || ||||||||||    
T  18427008 cgacaccgacatatataattacaccgaattatgtgattttttgaaattattagtggtgtcggcgtgtccgtgtccgtatctgtgcttcata 18426918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 29112307 - 29112369
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgtgcttcat 166  Q
    ||||| ||| |||||||||||||||  ||||||  |||||| |||||||| ||||||||||||    
T  29112307 attatatgattttctcaaataattagtggtgtcaacgtgtcagtgtccgtatccgtgcttcat 29112369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 7928509 - 7928448
Alignment:
Q  78 cgacaccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcgg 138  Q
    |||||||||||||||||| |||| || ||||||||| ||| |||||| |||| |||||||||    
T  7928509 cgacaccgacacatataattacactgaattatgtgattttttcaaattattagcggtgtcgg 7928448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 156
Target Start/End: Original strand, 24205047 - 24205120
Alignment:
Q  84 cgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    |||||| ||||| |||| || ||||||| | |||||||||| |||| | ||||||||||||| |||||||||||    
T  24205047 cgacacttataattacactgtattatgtcattttctcaaattattatccgtgtcggcgtgtcagtgtccgtgtc 24205120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 78 - 150
Target Start/End: Complemental strand, 35222997 - 35222924
Alignment:
Q  78 cgacaccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtc 150  Q
    |||||||||||||||||| ||||||| ||||||||| ||||| |||   |||   |||||||||||||||||||    
T  35222997 cgacaccgacacatataattacattgaattatgtgattttctaaaaatgttagttgtgtcggcgtgtctgtgtc 35222924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 152
Target Start/End: Original strand, 2620080 - 2620128
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccg 152  Q
    ||||||||| |||||||||| ||||  |||||||||||||| |||||||    
T  2620080 attatgtgattttctcaaatgattagtggtgtcggcgtgtcagtgtccg 2620128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 78 - 149
Target Start/End: Original strand, 8789550 - 8789622
Alignment:
Q  78 cgacaccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgt 149  Q
    |||||||||||||||||| ||||  | ||||||||| |||||||||| || | | ||||||| ||||||||||    
T  8789550 cgacaccgacacatataattacacggaattatgtgattttctcaaattataagccgtgtcggtgtgtctgtgt 8789622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 10268513 - 10268565
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||| ||| |||||| |||||| ||||||||||||| |||||| ||||    
T  10268513 attatgtgattttttcaaattattaactgtgtcggcgtgtcagtgtccatgtc 10268565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 106 - 150
Target Start/End: Complemental strand, 26290401 - 26290357
Alignment:
Q  106 tatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtc 150  Q
    ||||||| |||||||||| ||||| |||||||||||||| |||||    
T  26290401 tatgtgattttctcaaattattaatggtgtcggcgtgtcagtgtc 26290357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 144
Target Start/End: Original strand, 32804567 - 32804607
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtc 144  Q
    ||||||||| |||||||||| ||||||||||||||| ||||    
T  32804567 attatgtgattttctcaaattattaacggtgtcggcatgtc 32804607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0697 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0697
Description:

Target: scaffold0697; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 150
Target Start/End: Complemental strand, 1676 - 1630
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtc 150  Q
    ||||| ||| |||||||||| ||||||||||||||||||||||||||    
T  1676 attatatgattttctcaaattattaacggtgtcggcgtgtctgtgtc 1630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 104 - 153
Target Start/End: Original strand, 192276 - 192325
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgt 153  Q
    ||||||| | |||||||||| |||||||||||||||||||| ||||||||    
T  192276 attatgtaattttctcaaattattaacggtgtcggcgtgtcagtgtccgt 192325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 84 - 156
Target Start/End: Original strand, 225274 - 225347
Alignment:
Q  84 cgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    |||||| ||||| ||||||| ||||||| | |||||||||| |||| | ||||||||||||| |||||||||||    
T  225274 cgacacttataattacattgtattatgtcattttctcaaattattatctgtgtcggcgtgtcagtgtccgtgtc 225347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 104 - 159
Target Start/End: Complemental strand, 51843 - 51788
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtccgt 159  Q
    ||||||||| ||| |||||| |||| | ||||||||||||| ||||||||||||||    
T  51843 attatgtgattttttcaaattattagctgtgtcggcgtgtcagtgtccgtgtccgt 51788  T

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Target: scaffold0168 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 21105 - 21023
Alignment:
Q  75 acacgacaccgacacatataactacattga-ttatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    |||||| |||||||||||||| || |  || |||||||| |||||||||| |||||| ||||| || |||| |||||||||||    
T  21105 acacgataccgacacatataattataccgacttatgtgattttctcaaattattaaccgtgtcagcatgtcagtgtccgtgtc 21023  T

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Target: scaffold0020 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 135309 - 135391
Alignment:
Q  75 acacgacaccgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||||||||||||||| ||||  | ||||||||| |||||||||| |||| | ||||||| ||||  ||||| |||||    
T  135309 acacgacaccgacacatataattacacagaattatgtgattttctcaaattattagcagtgtcggtgtgttggtgtctgtgtc 135391  T

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Target: scaffold0085 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 144
Target Start/End: Complemental strand, 26446 - 26385
Alignment:
Q  84 cgacacatataactacattg-attatgtgaatttctcaaataattaacggtgtcggcgtgtc 144  Q
    ||||||||||||| |||||| ||||||||| |||||||||| ||||  ||||||| ||||||    
T  26446 cgacacatataacgacattgaattatgtgattttctcaaattattagtggtgtcgacgtgtc 26385  T

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Target: scaffold0306 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 13432 - 13380
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||| |||||||||| ||||   ||||||||||||| |||||||||||    
T  13432 attatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 13380  T

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Target: scaffold0152 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Original strand, 21895 - 21947
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||| |||||||||| ||||   ||||||||||||| |||||||||||    
T  21895 attatgtgattttctcaaattattagttgtgtcggcgtgtcagtgtccgtgtc 21947  T

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Target: scaffold0027 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 104 - 156
Target Start/End: Complemental strand, 46714 - 46662
Alignment:
Q  104 attatgtgaatttctcaaataattaacggtgtcggcgtgtctgtgtccgtgtc 156  Q
    ||||||||| ||| |||||| |||||| |||||||||||||  ||||||||||    
T  46714 attatgtgattttttcaaattattaactgtgtcggcgtgtcattgtccgtgtc 46662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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