View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1406_low_31 (Length: 304)
Name: NF1406_low_31
Description: NF1406
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1406_low_31 |
 | |
|
| [»] scaffold0648 (1 HSPs) |
| | |
|
| [»] scaffold0274 (2 HSPs) |
| | |
|
| [»] scaffold0271 (1 HSPs) |
| | |
|
| [»] scaffold0640 (1 HSPs) |
| | |
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Alignment Details
Target: chr3 (Bit Score: 259; Significance: 1e-144; HSPs: 27)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 17726130 - 17726404
Alignment:
| Q |
1 |
catccctagatacaatgattctttgatagagtcatcatcttcattctttgtagacagtgttgaatttttaggattttcttcttctatggtacaattatta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17726130 |
catccctagatacaatgattctttgatagagtcatcatcttcattctttgtagacaactttgaatttttaggattttcttcttctatggtacaattatta |
17726229 |
T |
|
| Q |
101 |
agaggagctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcctattgggatttttccatcaaacttgttgtaag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17726230 |
agaggagctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcctattgggatttttccatcaaacttgttgtaag |
17726329 |
T |
|
| Q |
201 |
ataaattcaaataacccaaaaagtgtaacgaagacatgctccgaggaatttcaccagaaaaattattgttggaga |
275 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
17726330 |
ataaattcaaataacccaaaaagtgtaacgaagacatgctctgaggaatttcaccagaaaaattattgttggaga |
17726404 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 275
Target Start/End: Original strand, 19027359 - 19027633
Alignment:
| Q |
1 |
catccctagatacaatgattctttgatagagtcatcatcttcattctttgtagacagtgttgaatttttaggattttcttcttctatggtacaattatta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19027359 |
catccctagatacaatgattctttgatagagtcatcatcttcattctttgtagacaactttgaatttttaggattttcttcttctatggtacaattatta |
19027458 |
T |
|
| Q |
101 |
agaggagctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcctattgggatttttccatcaaacttgttgtaag |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19027459 |
agaggagctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcctattgggatttttccatcaaacttgttgtaag |
19027558 |
T |
|
| Q |
201 |
ataaattcaaataacccaaaaagtgtaacgaagacatgctccgaggaatttcaccagaaaaattattgttggaga |
275 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
19027559 |
ataaattcaaataacccaaaaagtgtaacgaagacatgctctgaggaatttcaccagaaaaattattgttggaga |
19027633 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 1 - 273
Target Start/End: Complemental strand, 19394556 - 19394284
Alignment:
| Q |
1 |
catccctagatacaatgattctttgatagagtcatcatcttcattctttgtagacagtgttgaatttttaggattttcttcttctatggtacaattatta |
100 |
Q |
| |
|
|||||||||||||||||||||||| |||||||| ||||||||||||| |||||| | ||| | |||||||||||||||||||| |||||||||| || |
|
|
| T |
19394556 |
catccctagatacaatgattcttttatagagtcttcatcttcattctctgtagatggctttgcagttttaggattttcttcttctgcggtacaattacta |
19394457 |
T |
|
| Q |
101 |
agaggagctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcctattgggatttttccatcaaacttgttgtaag |
200 |
Q |
| |
|
|| |||||||| ||||| | | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| |
|
|
| T |
19394456 |
agtggagctccacatagtttaggattcccaatataactcgatgcattaaaactttgaagttgagttcctattgggatttttccgtcaaaattgttgtaag |
19394357 |
T |
|
| Q |
201 |
ataaattcaaataacccaaaaagtgtaacgaagacatgctccgaggaatttcaccagaaaaattattgttgga |
273 |
Q |
| |
|
||| |||||||||||||||||||| ||| || |||||| |||||||||||||| |||| ||||| ||||| |
|
|
| T |
19394356 |
atagattcaaataacccaaaaagtttaagagagccatgctttgaggaatttcaccataaaacttattattgga |
19394284 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 19426097 - 19425831
Alignment:
| Q |
1 |
catccctagatacaatgattctttgatagagtcatcatcttcattctttgtagacagtgttgaatttttaggattttcttcttctatggtacaattatta |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||||||||| |||||||||||||| |
|
|
| T |
19426097 |
catccctagatacaatgattctttgatagagtcatcatcttcattctttgtagatggtgttgcagttttaggattttcttctttcatggtacaattattg |
19425998 |
T |
|
| Q |
101 |
agaggagctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcctattgggatttttccatcaaacttgttgtaag |
200 |
Q |
| |
|
||||||||||||||||| | | |||||||||| |||||||||||||||| ||||||||||| ||||| ||||||||||||| | || || ||| ||| |
|
|
| T |
19425997 |
agaggagctccgcatagtttaggattcccaatgtaactcgatgcattaattctttgaagttgtgttccagttgggatttttccgtttaaattattgcaag |
19425898 |
T |
|
| Q |
201 |
ataaattcaaataacccaaaaagtgtaacgaagacatgctccgaggaatttcaccagaaaaattatt |
267 |
Q |
| |
|
||||||||||| ||||||||||| ||| |||||||||| |||||||||||||| |||| ||||| |
|
|
| T |
19425897 |
ataaattcaaaaaacccaaaaaggttaagacagacatgctctgaggaatttcaccacaaaacttatt |
19425831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 5 - 267
Target Start/End: Complemental strand, 19355118 - 19354856
Alignment:
| Q |
5 |
cctagatacaatgattctttgatagagtcatcatcttcattctttgtagacagtgttgaatttttaggattttcttcttctatggtacaattattaagag |
104 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||| |||||||| | ||| | |||||||||||||||||| ||||||||||||| |||| |
|
|
| T |
19355118 |
cctagatacaatgattctttgatagagtcgtcatcttcattttttgtagatggcattgcagttttaggattttcttctttcttggtacaattattgagag |
19355019 |
T |
|
| Q |
105 |
gagctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcctattgggatttttccatcaaacttgttgtaagataa |
204 |
Q |
| |
|
||||||||||||| | | |||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |
|
|
| T |
19355018 |
gagctccgcatagtttaggatttccaacgtaacttgatgcattaaaactttgaagttgagttcctattgggatttttccgtcaaaattgttgtaagataa |
19354919 |
T |
|
| Q |
205 |
attcaaataacccaaaaagtgtaacgaagacatgctccgaggaatttcaccagaaaaattatt |
267 |
Q |
| |
|
|||||||||||| |||||| ||| |||||||||| ||||||| |||||| |||| ||||| |
|
|
| T |
19354918 |
attcaaataacctaaaaaggttaagagagacatgctctgaggaatgtcaccataaaacttatt |
19354856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 8 - 267
Target Start/End: Original strand, 18872478 - 18872737
Alignment:
| Q |
8 |
agatacaatgattctttgatagagtcatcatcttcattctttgtagacagtgttgaatttttaggattttcttcttctatggtacaattattaagaggag |
107 |
Q |
| |
|
||||||| ||||||| | ||||| ||| |||||||||||||||||| | ||| | |||||||||||||||||| | ||||||||||||| |||||| |
|
|
| T |
18872478 |
agatacattgattctcttatagaagcataatcttcattctttgtagatggctttgcagttttaggattttcttcttttgtggtacaattattgagaggat |
18872577 |
T |
|
| Q |
108 |
ctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcctattgggatttttccatcaaacttgttgtaagataaatt |
207 |
Q |
| |
|
|||||||||| | | |||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||| ||||| |||||||||||||||| |
|
|
| T |
18872578 |
ctccgcatagtttaggattcccaatgcaactcgatgcattaaaactttgaagttgagttccaattggaatttttccttcaaaactgttgtaagataaatt |
18872677 |
T |
|
| Q |
208 |
caaataacccaaaaagtgtaacgaagacatgctccgaggaatttcaccagaaaaattatt |
267 |
Q |
| |
|
||||||||||| |||||||||| |||||||||| |||||||||||||| |||| ||||| |
|
|
| T |
18872678 |
caaataacccataaagtgtaacagagacatgctctgaggaatttcaccacaaaacttatt |
18872737 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 267
Target Start/End: Complemental strand, 19335419 - 19335153
Alignment:
| Q |
1 |
catccctagatacaatgattctttgatagagtcatcatcttcattctttgtagacagtgttgaatttttaggattttcttcttctatggtacaattatta |
100 |
Q |
| |
|
|||||||||||||||||||||| | | |||||| ||||||||||| | ||| || | ||| | |||||||||||||||||| |||||||||||||| |
|
|
| T |
19335419 |
catccctagatacaatgattctcttaaagagtcgtcatcttcattatctgttgatggcattgcagttttaggattttcttctttcatggtacaattattg |
19335320 |
T |
|
| Q |
101 |
agaggagctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcctattgggatttttccatcaaacttgttgtaag |
200 |
Q |
| |
|
|||||||||||||| || | | |||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||| ||||||||| |
|
|
| T |
19335319 |
agaggagctccgcacagtttaggattcccaatgtaactcgatgcattaaaactttgaagttgtgttccagttgggatttttccttcaaaactgttgtaag |
19335220 |
T |
|
| Q |
201 |
ataaattcaaataacccaaaaagtgtaacgaagacatgctccgaggaatttcaccagaaaaattatt |
267 |
Q |
| |
|
||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
19335219 |
ataaattcaaataacccaaaaaggttaagacagacatgctccgaggaatttcaccataaaacttatt |
19335153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 5 - 267
Target Start/End: Complemental strand, 19377022 - 19376763
Alignment:
| Q |
5 |
cctagatacaatgattctttgatagagtcatcatcttcattctttgtagacagtgttgaatttttaggattttcttcttctatggtacaattattaagag |
104 |
Q |
| |
|
|||||||||||||||||| | || || ||| ||| |||||| ||||||| |||||| |||||||| |||||||||| ||||||||||||||||| |
|
|
| T |
19377022 |
cctagatacaatgattctcttatggattcactatcctcattccttgtagattgtgttgcatttttaga---ttcttcttctgcggtacaattattaagag |
19376926 |
T |
|
| Q |
105 |
gagctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcctattgggatttttccatcaaacttgttgtaagataa |
204 |
Q |
| |
|
||||||||||||| | | |||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
19376925 |
gagctccgcatagtttaggattcccaatgtaactcgatgcattaaaactttgaagttgagttcctattggaatttttccatcaaaattgttgtaagatag |
19376826 |
T |
|
| Q |
205 |
attcaaataacccaaaaagtgtaacgaagacatgctccgaggaatttcaccagaaaaattatt |
267 |
Q |
| |
|
||||||||||||||||||| ||| ||||||| || |||||||||||||| |||| ||||| |
|
|
| T |
19376825 |
attcaaataacccaaaaaggttaagatagacatggtctgaggaatttcaccataaaacttatt |
19376763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 5 - 267
Target Start/End: Complemental strand, 18166559 - 18166297
Alignment:
| Q |
5 |
cctagatacaatgattctttgatagagtcatcatcttcattctttgtagacagtgttgaatttttaggattttcttcttctatggtacaattattaagag |
104 |
Q |
| |
|
||||| ||||| ||||| | |||||||||||||||||||||||||||||| | |||| | |||||| ||||| ||||| | ||||||||||| |||||| |
|
|
| T |
18166559 |
cctaggtacaaccattctcttatagagtcatcatcttcattctttgtagacggcgttgcagttttagaatttttttcttttgtggtacaattactaagag |
18166460 |
T |
|
| Q |
105 |
gagctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcctattgggatttttccatcaaacttgttgtaagataa |
204 |
Q |
| |
|
||||||| ||||| | | ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||| ||||| || ||||||||||| |
|
|
| T |
18166459 |
gagctccacatagtttaggattctcaatataacttgatgcattaaaactttgaagttgagttcctattgggattattccgtcaaagttattgtaagataa |
18166360 |
T |
|
| Q |
205 |
attcaaataacccaaaaagtgtaacgaagacatgctccgaggaatttcaccagaaaaattatt |
267 |
Q |
| |
|
|||||||||||| |||||| ||| ||| |||||| |||||||||||||| |||| ||||| |
|
|
| T |
18166359 |
attcaaataacctaaaaaggttaagagagagatgctctgaggaatttcaccataaaacttatt |
18166297 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 5 - 255
Target Start/End: Complemental strand, 19415587 - 19415337
Alignment:
| Q |
5 |
cctagatacaatgattctttgatagagtcatcatcttcattctttgtagacagtgttgaatttttaggattttcttcttctatggtacaattattaagag |
104 |
Q |
| |
|
|||||||||||||| ||||| ||||| |||| ||||||||||||||| || | |||| | || ||||||||||||||| ||||||||||||||||||| |
|
|
| T |
19415587 |
cctagatacaatgaatctttcatagaatcataatcttcattctttgttgatggcgttgcagttgtaggattttcttctttgatggtacaattattaagag |
19415488 |
T |
|
| Q |
105 |
gagctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcctattgggatttttccatcaaacttgttgtaagataa |
204 |
Q |
| |
|
||||||||||||| | | ||||||| | ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
19415487 |
gagctccgcatagtttaggattcccgttgtaacttgatgcgttaaaactttgaagttgagttcctattgggatttttccgtcaaaactgttgtaagataa |
19415388 |
T |
|
| Q |
205 |
attcaaataacccaaaaagtgtaacgaagacatgctccgaggaatttcacc |
255 |
Q |
| |
|
||| |||||| |||||||| ||| ||||||||||| ||||||||||||| |
|
|
| T |
19415387 |
atttaaataatccaaaaaggttaagaaagacatgctctgaggaatttcacc |
19415337 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 11 - 267
Target Start/End: Complemental strand, 17943351 - 17943095
Alignment:
| Q |
11 |
tacaatgattctttgatagagtcatcatcttcattctttgtagacagtgttgaatttttaggattttcttcttctatggtacaattattaagaggagctc |
110 |
Q |
| |
|
|||| ||||||||| |||||||||||||||||||||| ||| ||| | ||| | |||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
17943351 |
tacagtgattcttttatagagtcatcatcttcattctctgtggacggctttgcagttttaggattttcttctttcgtggtacaattattaagaggagctc |
17943252 |
T |
|
| Q |
111 |
cgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcctattgggatttttccatcaaacttgttgtaagataaattcaa |
210 |
Q |
| |
|
| ||||| | | |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||| ||||||||||||| |
|
|
| T |
17943251 |
cacatagtttaggattcccaatgtaactcgatgcattaaaactttgaagttgagttccaattgggatttttccatcaaaattattgcaagataaattcaa |
17943152 |
T |
|
| Q |
211 |
ataacccaaaaagtgtaacgaagacatgctccgaggaatttcaccagaaaaattatt |
267 |
Q |
| |
|
|||||||| | ||| || ||||||| |||||||||||||| |||| ||||| |
|
|
| T |
17943151 |
cacccccaaaaaatttaagagagccatgctctgaggaatttcaccaaaaaacttatt |
17943095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 5 - 224
Target Start/End: Complemental strand, 25464456 - 25464234
Alignment:
| Q |
5 |
cctagatacaatgattctttgatagagtcatc---atcttcattctttgtagacagtgttgaatttttaggattttcttcttctatggtacaattattaa |
101 |
Q |
| |
|
|||||||||||||||||||| ||||||||||| ||||||| |||||| |||| |||||| |||||||||||||||||||| | ||||||| | |||| |
|
|
| T |
25464456 |
cctagatacaatgattcttttatagagtcatcgttatcttcactctttgcagacggtgttgcatttttaggattttcttcttttgtggtacactctttaa |
25464357 |
T |
|
| Q |
102 |
gaggagctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcctattgggatttttccatcaaacttgttgtaaga |
201 |
Q |
| |
|
||||| |||||||| | |||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
25464356 |
gaggaagtccgcataattttggattgccaatgtagctcgatgcattaaaactttgaagttgagttcctattgggatttttccatcaaaattgttgtaaga |
25464257 |
T |
|
| Q |
202 |
taaattcaaataacccaaaaagt |
224 |
Q |
| |
|
|||||||||||||| |||||||| |
|
|
| T |
25464256 |
taaattcaaataactcaaaaagt |
25464234 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 5 - 267
Target Start/End: Complemental strand, 18017425 - 18017163
Alignment:
| Q |
5 |
cctagatacaatgattctttgatagagtcatcatcttcattctttgtagacagtgttgaatttttaggattttcttcttctatggtacaattattaagag |
104 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||| ||||||| |||||| | ||| | ||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
18017425 |
cctagatacaatgattcttttatagattcatcatcctcattctctgtagatggcattgcagttttaggattttcttctgttatggtacaattattaagag |
18017326 |
T |
|
| Q |
105 |
gagctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcctattgggatttttccatcaaacttgttgtaagataa |
204 |
Q |
| |
|
|||| ||||| || | | |||||||||||||||| ||||||| | ||||||||||||||||||| ||||||||||||||||||| || ||| ||||||| |
|
|
| T |
18017325 |
gagccccgcacagtttaggattcccaatataacttgatgcatcacgactttgaagttgagttcctgttgggatttttccatcaaaattattgcaagataa |
18017226 |
T |
|
| Q |
205 |
attcaaataacccaaaaagtgtaacgaagacatgctccgaggaatttcaccagaaaaattatt |
267 |
Q |
| |
|
|||||| |||||||||| ||| || ||||||| |||||||||||||| |||| ||||| |
|
|
| T |
18017225 |
attcaacacccccaaaaagtttaagagagccatgctctgaggaatttcaccaaaaaacttatt |
18017163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 5 - 267
Target Start/End: Complemental strand, 19382296 - 19382034
Alignment:
| Q |
5 |
cctagatacaatgattctttgatagagtcatcatcttcattctttgtagacagtgttgaatttttaggattttcttcttctatggtacaattattaagag |
104 |
Q |
| |
|
||||||||||| || ||| | ||||| |||||||||||||||| |||||| | || | ||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
19382296 |
cctagatacaacgactctattatagattcatcatcttcattctctgtagatggcagtgcagttttaggattttcttctgttatggtacaattattaagag |
19382197 |
T |
|
| Q |
105 |
gagctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcctattgggatttttccatcaaacttgttgtaagataa |
204 |
Q |
| |
|
||||||||||||| | | |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||| || ||| ||||||| |
|
|
| T |
19382196 |
gagctccgcatagtttaggattcccaatataacttgatgcattaaaactttgaagttgagttcctgttgggatttttccatcaaaattattgcaagataa |
19382097 |
T |
|
| Q |
205 |
attcaaataacccaaaaagtgtaacgaagacatgctccgaggaatttcaccagaaaaattatt |
267 |
Q |
| |
|
|||||| ||||||||| ||| || |||||| |||||||||||||| |||| ||||| |
|
|
| T |
19382096 |
attcaacacctccaaaaagtttaagagagccatgctttgaggaatttcaccaaaaaacttatt |
19382034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 7 - 267
Target Start/End: Complemental strand, 19465753 - 19465494
Alignment:
| Q |
7 |
tagatacaatgattctttgatagagtcatcatcttcattctttgtagacagtgttgaatttttaggattttcttcttctatggtacaattattaagagga |
106 |
Q |
| |
|
|||||||||||||||||| || || |||||||| ||||||| |||||| | || | ||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
19465753 |
tagatacaatgattcttttatcgattcatcatcctcattctctgtagatggcagtgcagttttaggattttcttctgttatggtacaattattaagagga |
19465654 |
T |
|
| Q |
107 |
gctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcctattgggatttttccatcaaacttgttgtaagataaat |
206 |
Q |
| |
|
||||||||||| | | |||||||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||| || ||| ||||||||| |
|
|
| T |
19465653 |
gctccgcatagtttaggattcccaatataacttgatacattaaaactttgaagttgagttcctattggaatttttccatcaaaattattgcaagataaat |
19465554 |
T |
|
| Q |
207 |
tcaaataacccaaaaagtgtaacgaagacatgctccgaggaatttcaccagaaaaattatt |
267 |
Q |
| |
|
|||| ||||||||| || | || ||||||| |||||||||||||| |||| ||||| |
|
|
| T |
19465553 |
tcaacacctccaaaaagtttagag-agccatgctctgaggaatttcaccaaaaaacttatt |
19465494 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 68 - 267
Target Start/End: Original strand, 14895050 - 14895249
Alignment:
| Q |
68 |
ttaggattttcttcttctatggtacaattattaagaggagctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttc |
167 |
Q |
| |
|
|||||||||||||||||| |||||||||| | | ||||||||||||||| | | |||| ||||| || |||||| |||||||||||||||||||||||| |
|
|
| T |
14895050 |
ttaggattttcttcttctgtggtacaattggttacaggagctccgcatagtttaggatttccaatgtagctcgattcattaaaactttgaagttgagttc |
14895149 |
T |
|
| Q |
168 |
ctattgggatttttccatcaaacttgttgtaagataaattcaaataacccaaaaagtgtaacga-agacatgctccgaggaatttcaccagaaaaattat |
266 |
Q |
| |
|
|| |||| |||||||| ||||| |||||||||||||||||||||||||||||||| ||| | || |||||||||| | |||||||||||| |||| |||| |
|
|
| T |
14895150 |
ctgttggaatttttccgtcaaaattgttgtaagataaattcaaataacccaaaaa-tgttaagagagacatgctctgcggaatttcaccataaaacttat |
14895248 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 16 - 273
Target Start/End: Complemental strand, 19456688 - 19456432
Alignment:
| Q |
16 |
tgattctttgatagagtcatcatcttcattctttgtagacagtgttgaatttttaggattttcttcttctatggtacaattattaagaggagctccgcat |
115 |
Q |
| |
|
||||||| | |||||||||||||||||| ||| ||| || | |||| | | ||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
19456688 |
tgattctcttatagagtcatcatcttcaatctctgtggatgg-gttgcagtcttaggattttcttcttccttggtacaattattaagaggagctccgcat |
19456590 |
T |
|
| Q |
116 |
agataatgattcccaatataactcgatgcattaaaactttgaagttgagttcctattgggatttttccatcaaacttgttgtaagataaattcaaataac |
215 |
Q |
| |
|
| | |||| ||||| || |||||||| ||||||||||||||||| ||| |||| |||||||||| ||||| || ||||| |||||||||||||||| |
|
|
| T |
19456589 |
aattttggatttccaatgtagctcgatgcgttaaaactttgaagttgcgttgctatcgggatttttctgtcaaaattattgtatgataaattcaaataac |
19456490 |
T |
|
| Q |
216 |
ccaaaaagtgtaacgaagacatgctccgaggaatttcaccagaaaaattattgttgga |
273 |
Q |
| |
|
|||||||| ||| |||||||||| | |||||||||||| |||| ||||| ||||| |
|
|
| T |
19456489 |
ccaaaaaggttaagagagacatgctctgtggaatttcaccacaaaacttatttttgga |
19456432 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 5 - 207
Target Start/End: Complemental strand, 19352795 - 19352593
Alignment:
| Q |
5 |
cctagatacaatgattctttgatagagtcatcatcttcattctttgtagacagtgttgaatttttaggattttcttcttctatggtacaattattaagag |
104 |
Q |
| |
|
|||||||||||||||||||| || ||||||||| ||||||||| ||| || | |||| | | |||||||||||||||| ||||||||||||||||||| |
|
|
| T |
19352795 |
cctagatacaatgattcttttatggagtcatcaccttcattctctgttgatggcgttgcagtcttaggattttcttctttcatggtacaattattaagag |
19352696 |
T |
|
| Q |
105 |
gagctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcctattgggatttttccatcaaacttgttgtaagataa |
204 |
Q |
| |
|
||||||| ||||| | |||||||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||||||| || || ||| ||||||| |
|
|
| T |
19352695 |
gagctccacatagtctaggattcccaatgtaacttgatgcattaaaactttgaagttgtgttccagttgggatttttccattgaaattattgcaagataa |
19352596 |
T |
|
| Q |
205 |
att |
207 |
Q |
| |
|
||| |
|
|
| T |
19352595 |
att |
19352593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 8 - 267
Target Start/End: Complemental strand, 16678607 - 16678351
Alignment:
| Q |
8 |
agatacaatgattctttgatagagtcatcatcttcattctttgtagacagtgttgaatttttaggattttcttcttctatggtacaattattaagaggag |
107 |
Q |
| |
|
||||||||||||||||| | || |||| ||||||| | | |||||| |||||| |||||||||||||||| | ||||||| || || ||||||| |
|
|
| T |
16678607 |
agatacaatgattcttttagagtatcattatcttcactttctgtagatggtgttgtgtttttaggattttcttttg---tggtacagtttttgagaggag |
16678511 |
T |
|
| Q |
108 |
ctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcctattgggatttttccatcaaacttgttgtaagataaatt |
207 |
Q |
| |
|
||||||||| | |||| ||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||| |||| ||||| |
|
|
| T |
16678510 |
ctccgcataattttggattgccaatgtagctcgatgcattaaaactttgaagttgagttcctatcgggatttttccgtcaaaattgttgcaagacaaatt |
16678411 |
T |
|
| Q |
208 |
caaataacccaaaaagtgtaacgaagacatgctccgaggaatttcaccagaaaaattatt |
267 |
Q |
| |
|
||||||||||||||||| ||| |||| ||| ||||||||||||||||||| ||||| |
|
|
| T |
16678410 |
caaataacccaaaaagtttaagagagacgcactctgaggaatttcaccagaaaacttatt |
16678351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 70 - 256
Target Start/End: Complemental strand, 19462530 - 19462344
Alignment:
| Q |
70 |
aggattttcttcttctatggtacaattattaagaggagctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcct |
169 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||||||| ||||||| | |||| ||||| || || ||||||||||||||||||||||| ||| || |
|
|
| T |
19462530 |
aggattttcttcttccgtggtacagttattaagaggagcaccgcataattttggattgccaatgtagcttgatgcattaaaactttgaagttgcgttgct |
19462431 |
T |
|
| Q |
170 |
attgggatttttccatcaaacttgttgtaagataaattcaaataacccaaaaagtgtaacgaagacatgctccgaggaatttcacca |
256 |
Q |
| |
|
|||||||||||||| ||||| || ||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |
|
|
| T |
19462430 |
attgggatttttccgtcaaaattattgtatgataaattcaaataacccaaaaaagttaagagagacatgctccgaggaatttcacca |
19462344 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 70 - 261
Target Start/End: Complemental strand, 18148168 - 18147977
Alignment:
| Q |
70 |
aggattttcttcttctatggtacaattattaagaggagctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcct |
169 |
Q |
| |
|
||||||||||||||| |||||||||||||||| |||||||||||||| | | |||| ||||| || |||||||||||||||||||||||||| ||||| |
|
|
| T |
18148168 |
aggattttcttcttccgtggtacaattattaaggggagctccgcatagtttaggattgccaatgtagctcgatgcattaaaactttgaagttgtgttccg |
18148069 |
T |
|
| Q |
170 |
attgggatttttccatcaaacttgttgtaagataaattcaaataacccaaaaagtgtaacgaagacatgctccgaggaatttcaccagaaaa |
261 |
Q |
| |
|
|| |||||| |||| ||||| || || || |||||||||||||||| ||||||| ||| |||||||| | |||||||||||||| |||| |
|
|
| T |
18148068 |
atcgggattcttccgtcaaaattattatatgataaattcaaataactcaaaaaggttaagagagacatgccctgaggaatttcaccaaaaaa |
18147977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 70 - 256
Target Start/End: Complemental strand, 18117306 - 18117120
Alignment:
| Q |
70 |
aggattttcttcttctatggtacaattattaagaggagctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcct |
169 |
Q |
| |
|
||||||||||||||| ||||||| |||||||||||||| ||||||| | |||| ||||| || || ||||||||||||||||||||||| ||| || |
|
|
| T |
18117306 |
aggattttcttcttccgtggtacagttattaagaggagcgccgcataattttggattgccaatgtagcttgatgcattaaaactttgaagttgcgttgct |
18117207 |
T |
|
| Q |
170 |
attgggatttttccatcaaacttgttgtaagataaattcaaataacccaaaaagtgtaacgaagacatgctccgaggaatttcacca |
256 |
Q |
| |
|
|||||||||||||| ||||| || ||||| ||||||||||||||||||||||| ||| |||||||||| |||||||||||||| |
|
|
| T |
18117206 |
attgggatttttccgtcaaaattattgtatgataaattcaaataacccaaaaaagttaagagagacatgctctgaggaatttcacca |
18117120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 64 - 261
Target Start/End: Complemental strand, 19438302 - 19438105
Alignment:
| Q |
64 |
atttttaggattttcttcttctatggtacaattattaagaggagctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttga |
163 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||||||||| |||| |||| | | |||| ||||| || |||||||||||||||||||||||||| |
|
|
| T |
19438302 |
atttttaggattttcttcttccgtggtacaattattaagaggaactccacataatttaggattgccaatgtagctcgatgcattaaaactttgaagttgc |
19438203 |
T |
|
| Q |
164 |
gttcctattgggatttttccatcaaacttgttgtaagataaattcaaataacccaaaaagtgtaacgaagacatgctccgaggaatttcaccagaaaa |
261 |
Q |
| |
|
||||| || |||||| |||| ||||| || || || ||||||||||||||| |||||||| ||| |||||||| |||||||||||||| |||| |
|
|
| T |
19438202 |
gttccgatcgggattcttccgtcaaaattattatatgataaattcaaataatccaaaaaggttaagagagacatgccttgaggaatttcaccaaaaaa |
19438105 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 66 - 223
Target Start/End: Complemental strand, 18109784 - 18109627
Alignment:
| Q |
66 |
ttttaggattttcttcttctatggtacaattattaagaggagctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagt |
165 |
Q |
| |
|
|||||| |||||||||||| ||||||||||||||||||||| ||| |||| | |||| ||||| || |||||||||||||||||||||||||| || |
|
|
| T |
18109784 |
ttttagaattttcttcttccgtggtacaattattaagaggagatccacataattttggattgccaatgtagctcgatgcattaaaactttgaagttgtgt |
18109685 |
T |
|
| Q |
166 |
tcctattgggatttttccatcaaacttgttgtaagataaattcaaataacccaaaaag |
223 |
Q |
| |
|
|| | |||||||||||||||||| || || || |||||||||||||||||||||||| |
|
|
| T |
18109684 |
accgactgggatttttccatcaaaattattatatgataaattcaaataacccaaaaag |
18109627 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 64 - 223
Target Start/End: Complemental strand, 17951179 - 17951020
Alignment:
| Q |
64 |
atttttaggattttcttcttctatggtacaattattaagaggagctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttga |
163 |
Q |
| |
|
||||||||||||||||||||| ||| ||||||||||||||||| ||| |||| | | |||| ||||| || |||||||||||||||||||||||||| |
|
|
| T |
17951179 |
atttttaggattttcttcttccgtggaacaattattaagaggagatccacataatttaagattgccaatgtagctcgatgcattaaaactttgaagttgt |
17951080 |
T |
|
| Q |
164 |
gttcctattgggatttttccatcaaacttgttgtaagataaattcaaataacccaaaaag |
223 |
Q |
| |
|
|| || | ||||||||||||||||| || || || |||||||||||||||| ||||||| |
|
|
| T |
17951079 |
gtaccgaccgggatttttccatcaaaattattatatgataaattcaaataactcaaaaag |
17951020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 70 - 223
Target Start/End: Complemental strand, 18104846 - 18104693
Alignment:
| Q |
70 |
aggattttcttcttctatggtacaattattaagaggagctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcct |
169 |
Q |
| |
|
|||||||||||||| ||||||| ||||||||||||||||||||||| | | |||| ||||| || || ||||||||||||||||||||||| ||||| |
|
|
| T |
18104846 |
aggattttcttctttcctggtacagttattaagaggagctccgcatagtttaggattgccaatgtagcttgatgcattaaaactttgaagttgtgttccg |
18104747 |
T |
|
| Q |
170 |
attgggatttttccatcaaacttgttgtaagataaattcaaataacccaaaaag |
223 |
Q |
| |
|
| |||||| |||| ||||| || || || |||||||||||||||||||||||| |
|
|
| T |
18104746 |
gtcgggattcttccgtcaaaattattatatgataaattcaaataacccaaaaag |
18104693 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 90 - 267
Target Start/End: Complemental strand, 19401047 - 19400870
Alignment:
| Q |
90 |
tacaattattaagaggagctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcctattgggatttttccatcaaa |
189 |
Q |
| |
|
||||||| ||||||||||||||||||| | |||| ||||| | || |||| || |||| |||||| ||||| ||||||||||||| |||| ||||| |
|
|
| T |
19401047 |
tacaatttttaagaggagctccgcataactttggatttccaatgaagcttgatggatcaaaagtttgaatttgagatcctattgggattgttccgtcaaa |
19400948 |
T |
|
| Q |
190 |
cttgttgtaagataaattcaaataacccaaaaagtgtaacgaagacatgctccgaggaatttcaccagaaaaattatt |
267 |
Q |
| |
|
|| ||| |||||||||||||| | ||||||| ||| || ||||||| |||||||||||||| |||| ||||| |
|
|
| T |
19400947 |
attattgcaagataaattcaaaacctctaaaaagtttaagagagccatgctctgaggaatttcaccaaaaaacttatt |
19400870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 134; Significance: 9e-70; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 13 - 267
Target Start/End: Original strand, 13665553 - 13665809
Alignment:
| Q |
13 |
caatgattctttgatagagtcatcatcttcattctttgtagacagtgttgaatttttaggattttcttcttctatggtacaattattaagaggagctccg |
112 |
Q |
| |
|
|||||||||||| |||||||| |||||||||||||||||||| |||||| | || ||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
13665553 |
caatgattcttttatagagtcgtcatcttcattctttgtagatggtgttgcagttctaggattttcttctttcatggtacaattattaagaggagctcca |
13665652 |
T |
|
| Q |
113 |
catagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcctattgggatttttccatcaaacttgttgtaagataaattcaa-- |
210 |
Q |
| |
|
|| || | | |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||| |||||||||||| |
|
|
| T |
13665653 |
caaagtttaggattcccaatataacttgatgcattaaaactttgaagttgagttcctatagggatttttccgtcaaaattgttgtgagataaattcaaat |
13665752 |
T |
|
| Q |
211 |
ataacccaaaaagtgtaacgaagacatgctccgaggaatttcaccagaaaaattatt |
267 |
Q |
| |
|
||| |||||||| ||| ||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
13665753 |
atattccaaaaaggttaagatagacatgctccgaggaatttcaccaaaaaacttatt |
13665809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 15536940 - 15536718
Alignment:
| Q |
1 |
catccctagatacaatgattctttgatagagtcatcatcttcattctttgtagacagtgttgaatttttaggattttcttcttctatggtacaattatta |
100 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||| ||| || |||||| |||| ||||||||||||| ||||||||||||| |
|
|
| T |
15536940 |
catccctagatacaatgattctttgttagagtcatcatcttcattctctgtggatggtgttgcggttttgggattttcttctttcttggtacaattattg |
15536841 |
T |
|
| Q |
101 |
agaggagctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcctattgggatttttccatcaaacttgttgtaag |
200 |
Q |
| |
|
||||||||||| || || | | ||||| |||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||| || || ||| ||| |
|
|
| T |
15536840 |
agaggagctccacacagtttaggattctcaatgtaactcgatgcattaaaactttgaagttgtgttccaattgggatttttccattgaaattattgcaag |
15536741 |
T |
|
| Q |
201 |
ataaattcaaataacccaaaaag |
223 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
15536740 |
ataaattcaaataacccaaaaag |
15536718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 65 - 207
Target Start/End: Original strand, 2709230 - 2709372
Alignment:
| Q |
65 |
tttttaggattttcttcttctatggtacaattattaagaggagctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgag |
164 |
Q |
| |
|
|||||| |||||||||||||| ||||| || ||||||||||||||||||| | | |||||||| || ||||| ||||||||||| |||||||||| |
|
|
| T |
2709230 |
tttttatgattttcttcttctgcagtacagtttttaagaggagctccgcataattgtgggttcccaatgtagctcgaagcattaaaactctgaagttgag |
2709329 |
T |
|
| Q |
165 |
ttcctattgggatttttccatcaaacttgttgtaagataaatt |
207 |
Q |
| |
|
| ||||||||||||||||||| ||| || ||| |||||||||| |
|
|
| T |
2709330 |
tccctattgggatttttccattaaaattattgcaagataaatt |
2709372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 8 - 267
Target Start/End: Complemental strand, 8460966 - 8460707
Alignment:
| Q |
8 |
agatacaatgattctttgatagagtcatcatcttcattctttgtagacagtgttgaatttttaggattttcttcttctatggtacaattattaagaggag |
107 |
Q |
| |
|
||||||||||||||| | |||||||||||||||||||||| ||||||| | ||| | |||||||||||||||||| |||||||| || ||||||||| |
|
|
| T |
8460966 |
agatacaatgattctcttatagagtcatcatcttcattctctgtagacggcattgcagttttaggattttcttctttcgtggtacaactactaagaggag |
8460867 |
T |
|
| Q |
108 |
ctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcctattgggatttttccatcaaacttgttgtaagataaatt |
207 |
Q |
| |
|
||||||| || | | |||| ||||| || |||||||||||||||||||||||||||||||| |||||||||||||| ||||| || ||| |||||||||| |
|
|
| T |
8460866 |
ctccgcacagtttaggatttccaatgtagctcgatgcattaaaactttgaagttgagttccaattgggatttttccgtcaaaattattgcaagataaatt |
8460767 |
T |
|
| Q |
208 |
caaataacccaaaaagtgtaacgaagacatgctccgaggaatttcaccagaaaaattatt |
267 |
Q |
| |
|
|||| | ||||||| ||| || ||||||| |||||||||||||| |||| ||||| |
|
|
| T |
8460766 |
caaaacctctaaaaagtttaagagagccatgctctgaggaatttcaccacaaaacttatt |
8460707 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0648 (Bit Score: 89; Significance: 6e-43; HSPs: 1)
Name: scaffold0648
Description:
Target: scaffold0648; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 8 - 267
Target Start/End: Original strand, 2700 - 2960
Alignment:
| Q |
8 |
agatacaatgattctttgatagagtcatcatcttcattctttgtagacagtgttgaatttttaggattttcttcttctatggtacaattattaagaggag |
107 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||||| |||| | | ||| | |||||||||||||||||||| ||||| | || |||||||||| |
|
|
| T |
2700 |
agatacaatgactcttttgcagagtcatcatcttcattctctgtatatggctttgcagttttaggattttcttcttctgtggtatagtttttaagaggag |
2799 |
T |
|
| Q |
108 |
ctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcctattggg-atttttccatcaaacttgttgtaagataaat |
206 |
Q |
| |
|
|||||||| | |||| ||||||| ||||||||||||||||||||||||||||| || ||| || || |||| | ||| |||||| ||||||| | |
|
|
| T |
2800 |
ttccgcataattctggattggcaatatagctcgatgcattaaaactttgaagttgagtccccatttggtatagttccgttaaaattgttgcaagataagt |
2899 |
T |
|
| Q |
207 |
tcaaataacccaaaaagtgtaacgaagacatgctccgaggaatttcaccagaaaaattatt |
267 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
2900 |
tcaaataacccaaaaagtttaagtgagacatgctccgaggaatttcaccacaaaacttatt |
2960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274 (Bit Score: 89; Significance: 6e-43; HSPs: 2)
Name: scaffold0274
Description:
Target: scaffold0274; HSP #1
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 8 - 267
Target Start/End: Complemental strand, 21986 - 21726
Alignment:
| Q |
8 |
agatacaatgattctttgatagagtcatcatcttcattctttgtagacagtgttgaatttttaggattttcttcttctatggtacaattattaagaggag |
107 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||||| |||| | | ||| | |||||||||||||||||||| ||||| | || |||||||||| |
|
|
| T |
21986 |
agatacaatgactcttttgcagagtcatcatcttcattctctgtatatggctttgcagttttaggattttcttcttctgtggtatagtttttaagaggag |
21887 |
T |
|
| Q |
108 |
ctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcctattggg-atttttccatcaaacttgttgtaagataaat |
206 |
Q |
| |
|
|||||||| | |||| ||||||| ||||||||||||||||||||||||||||| || ||| || || |||| | ||| |||||| ||||||| | |
|
|
| T |
21886 |
ttccgcataattctggattggcaatatagctcgatgcattaaaactttgaagttgagtccccatttggtatagttccgttaaaattgttgcaagataagt |
21787 |
T |
|
| Q |
207 |
tcaaataacccaaaaagtgtaacgaagacatgctccgaggaatttcaccagaaaaattatt |
267 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
21786 |
tcaaataacccaaaaagtttaagtgagacatgctccgaggaatttcaccacaaaacttatt |
21726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 8 - 267
Target Start/End: Original strand, 2170 - 2429
Alignment:
| Q |
8 |
agatacaatgattctttgatagagtcatcatcttcattctttgtagacagtgttgaatttttaggattttcttcttctatggtacaattattaagaggag |
107 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||||| |||| | | ||| | || |||||||||||||| ||||||| || |||||||||| |
|
|
| T |
2170 |
agatacaatgactcttttgcagagtcatcatcttcattctctgtatatggctttgcagttataggattttcttctg---tggtacagtttttaagaggag |
2266 |
T |
|
| Q |
108 |
ctccgcatagataatgattcccaatataactcgatgcattaaaa-ctttgaagttgagttcctattggg-atttttccatcaaacttgttgtaagataaa |
205 |
Q |
| |
|
|||||||| | |||| ||||||| ||||||||||||||| |||||||||||||| || ||| || || |||| | ||| |||||| ||||||| |
|
|
| T |
2267 |
ttccgcataattctggattggcaatatagctcgatgcattaaaaactttgaagttgagtccccatttggtatagttccgttaaaattgttgcaagataag |
2366 |
T |
|
| Q |
206 |
ttcaaataa-cccaaaaagtgtaacgaagacatgctccgaggaatttcaccagaaaaattatt |
267 |
Q |
| |
|
||||||||| ||||| |||| ||| ||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
2367 |
ttcaaataaacccaagaagtttaagtgagacatgctccgaggaatttcaccacaaaacttatt |
2429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0271 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0271
Description:
Target: scaffold0271; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 8 - 267
Target Start/End: Complemental strand, 11901 - 11642
Alignment:
| Q |
8 |
agatacaatgattctttgatagagtcatcatcttcattctttgtagacagtgttgaatttttaggattttcttcttctatggtacaattattaagaggag |
107 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||||| |||| | | ||| | |||||||||||||||||| | ||||||| | |||||||||| |
|
|
| T |
11901 |
agatacaatgactcttttgcagagtcatcatcttcattctctgtatatggctttgcagttttaggattttcttcttttgtggtacagcttttaagaggag |
11802 |
T |
|
| Q |
108 |
ctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcctattgggatttttccatcaaacttgttgtaagataaatt |
207 |
Q |
| |
|
|| ||||| | |||| ||||||| ||||||||||||||||||||||||||||| || ||||| || |||| | ||| |||||| ||||||| || |
|
|
| T |
11801 |
ttctgcataattctggattggcaatatagctcgatgcattaaaactttgaagttgagtccccattggtatagttccgttaaaattgttgcaagataagtt |
11702 |
T |
|
| Q |
208 |
caaataacccaaaaagtgtaacgaagacatgctccgaggaatttcaccagaaaaattatt |
267 |
Q |
| |
|
|||||||||||| |||| ||| |||||||||| |||||||||||||| |||| ||||| |
|
|
| T |
11701 |
caaataacccaagaagtttaagtgagacatgctctgaggaatttcaccacaaaacttatt |
11642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0640 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0640
Description:
Target: scaffold0640; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 8 - 267
Target Start/End: Complemental strand, 6803 - 6547
Alignment:
| Q |
8 |
agatacaatgattctttgatagagtcatcatcttcattctttgtagacagtgttgaatttttaggattttcttcttctatggtacaattattaagaggag |
107 |
Q |
| |
|
||||||||||| ||||| |||||||||||||||||||| |||| | | ||| | || |||||||||||||| ||||||| || |||||||||| |
|
|
| T |
6803 |
agatacaatgactcttttgcagagtcatcatcttcattctctgtatatggctttgcagttataggattttcttctg---tggtacagtttttaagaggag |
6707 |
T |
|
| Q |
108 |
ctccgcatagataatgattcccaatataactcgatgcattaaaactttgaagttgagttcctattgggatttttccatcaaacttgttgtaagataaatt |
207 |
Q |
| |
|
|||||||| | |||| ||||||| ||||||||||||||||||||||||||||| || ||||| || |||| | ||| |||||| ||||||| || |
|
|
| T |
6706 |
ttccgcataattctggattggcaatatagctcgatgcattaaaactttgaagttgagtccccattggtatagttccgttaaaattgttgcaagataagtt |
6607 |
T |
|
| Q |
208 |
caaataacccaaaaagtgtaacgaagacatgctccgaggaatttcaccagaaaaattatt |
267 |
Q |
| |
|
|||||||||||| |||| ||| |||||||||| |||||||||||||| |||| ||||| |
|
|
| T |
6606 |
caaataacccaagaagtttaagtgagacatgctctgaggaatttcaccacaaaacttatt |
6547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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