View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14070_low_8 (Length: 269)
Name: NF14070_low_8
Description: NF14070
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14070_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 15 - 253
Target Start/End: Complemental strand, 22231926 - 22231691
Alignment:
| Q |
15 |
catttacaacacattggtccttccaaacattgatgacttatcactattcc-ttctttgaactacttgtttgaagtgctttttctctctcacacaaataag |
113 |
Q |
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| T |
22231926 |
catttacaacacattggtcctcccaaacattgatgacttatcactattcccttctttgaactacttgtttgaagtgctttctctctctcacacaaataag |
22231827 |
T |
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| Q |
114 |
ttgcttctctagctaatggcaagttgcaacatcatctctttcttgaaaatgaaaagaataaggaaaataagaatacaaatgtatttttatagtttacaac |
213 |
Q |
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| T |
22231826 |
ttgcttctctagctaatggcaagttgcaacatcatctctt----gaaaatgaaaagaataaggaaaataagaatacaaatgtatttttatagtttacaac |
22231731 |
T |
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| Q |
214 |
attttatttcaagtcctcctcctataaagagattttgcct |
253 |
Q |
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| T |
22231730 |
attttatttcaagtcctcctcctataaagagattttgcct |
22231691 |
T |
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