View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF14073_low_8 (Length: 251)
Name: NF14073_low_8
Description: NF14073
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF14073_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 30944528 - 30944749
Alignment:
| Q |
14 |
cgaagaatatttgaaggatcaatacttgctgaagtttgtttgaaggactaaaaatgaaatttgaaatttttatnnnnnnnn-ttatttaacacttatatt |
112 |
Q |
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| T |
30944528 |
cgaaaaatatttgaaggattaatacttgctgaaatttgtttgaaggactaaaaatgaaatatgaaatttctataaaaaaaaattatttaacacttatatt |
30944627 |
T |
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| Q |
113 |
taaaacaaacaacaaaacttttgannnnnnnngaaggaatgaaatttgagatttctatgaaaaaatatttgagatcacagtgaaaacaaagtcatgatta |
212 |
Q |
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| T |
30944628 |
taaaacaaacaacaaaacttttgaatttttttgaaggaatgaaatttgagatttctatgaaaaaatatttgagatcatagtgaaaacaaagtcatgatta |
30944727 |
T |
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| Q |
213 |
tggaatctttcatgcaaatgtt |
234 |
Q |
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|||||||||||||||||||||| |
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| T |
30944728 |
tggaatctttcatgcaaatgtt |
30944749 |
T |
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